View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11473_low_29 (Length: 286)
Name: NF11473_low_29
Description: NF11473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11473_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 9 - 272
Target Start/End: Complemental strand, 2036466 - 2036203
Alignment:
| Q |
9 |
agcataggcaaggtataaggcacatgagatgctatattgcttctctggttttgttttgtgctctaattcatgatatgcacctcaaaatgttggggatata |
108 |
Q |
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| T |
2036466 |
agcatgggcaaggtataaggcacatgagatgctatattgcttctctggttttgttttgtgctctaattcatgatatgcacctcaaaatgttggggatata |
2036367 |
T |
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| Q |
109 |
ctaatttatttatagtatatattaaaaataaataatgccagaaaagtttgcatcgtttacaacaaagttcaaacacatatagctggcatcgatttatatt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2036366 |
ctaatttatttatagtatatattaaaaataaataatgccagaaaagtttgcatcgtttacaacaaagttcaaacacatatagctggcatcgatttatatt |
2036267 |
T |
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| Q |
209 |
atttgttttcttctacccacccttctaatatttacacattgcacaggtgtgtggctgttacttt |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2036266 |
atttgttttcttctacccacccttctaatatttacacattgcacaggtgtgtggctgttacttt |
2036203 |
T |
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