View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11475_high_25 (Length: 279)
Name: NF11475_high_25
Description: NF11475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11475_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 41321764 - 41321515
Alignment:
| Q |
19 |
tgttgcacaagttaaaaatatactggaaactataagacaatatgatagagaagttaatgcattgatcaattgatgtatgcaagatcaactaagctcacag |
118 |
Q |
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| T |
41321764 |
tgttgcacaagttaaaaatatactggaaactataagacaatatgatagagaagttaatgcattgatcaattgatgtatgcaagatcaactaagctcacag |
41321665 |
T |
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| Q |
119 |
ggacgaagtgaaagtatcttagtatgcacatatatgaataatggttaatttcatttcctataatataatttcttctcatttaaattcgtattagaacttg |
218 |
Q |
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| T |
41321664 |
ggacgaagtgaaagtatcttagtatgcacatatatgaataatggttaatttcatttcctataatataatttcttttcatttaaattcgtattagaacttg |
41321565 |
T |
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| Q |
219 |
ttccataaagtgcattttgagaataatagcattaaataatgtgcattcat |
268 |
Q |
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| T |
41321564 |
ttccataaagtacattttgagaataatagcattaaataacgtgcattcat |
41321515 |
T |
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