View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11475_high_45 (Length: 234)
Name: NF11475_high_45
Description: NF11475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11475_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 52 - 202
Target Start/End: Original strand, 28570553 - 28570703
Alignment:
| Q |
52 |
actccatttgtgccctcatctgacaacaaatttcatactccaaatacttctccacacacctagcttgggttgtgactaacacttcaagaaaaatatttag |
151 |
Q |
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| T |
28570553 |
actccatttgtaccctcatctaacaacaaatttcacactccaaatacttctccacacacctagcttgggttgtgaccaacacttgaagaaaaatatttag |
28570652 |
T |
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| Q |
152 |
ctttgagtaatctagtcatccaattatctagattcatcattaacttccatg |
202 |
Q |
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| T |
28570653 |
ctttgagtaatctagtcatccaattatctagattcatcattaacttccatg |
28570703 |
T |
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