View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11475_high_54 (Length: 219)
Name: NF11475_high_54
Description: NF11475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11475_high_54 |
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Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 44345997 - 44345812
Alignment:
| Q |
18 |
gaaacaatatatacacacacccgaaataaaaccactagnnnnnnnnggtacaaaaagaactagcagttggtatccataaaaaaccctcagagcttattca |
117 |
Q |
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| T |
44345997 |
gaaacaatatatacacacacccgaaataaaaccactagttttttttggtacaaaaagaactagcagttggtatccataaaaaaccctgagagcttattta |
44345898 |
T |
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| Q |
118 |
gtatcaataagctcctcagagtttattgannnnnnnatgattcaacagaacttatttctataacttaacttatagtaatatatattt |
204 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44345897 |
gtatcaataagctcctcagagtttattgatttttttatgattcaacagaacttatttcta-aacttaacttatagtaatatatattt |
44345812 |
T |
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