View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11475_low_51 (Length: 226)

Name: NF11475_low_51
Description: NF11475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11475_low_51
NF11475_low_51
[»] chr5 (22 HSPs)
chr5 (23-207)||(29899640-29899825)
chr5 (23-207)||(20094500-20094685)
chr5 (23-207)||(25531682-25531867)
chr5 (129-207)||(22952603-22952681)
chr5 (73-205)||(7255971-7256108)
chr5 (74-205)||(15780785-15780916)
chr5 (74-205)||(31524264-31524395)
chr5 (74-205)||(7792942-7793073)
chr5 (75-141)||(24063214-24063279)
chr5 (75-141)||(24063090-24063155)
chr5 (74-205)||(11940540-11940671)
chr5 (74-141)||(7793149-7793215)
chr5 (74-141)||(7793291-7793357)
chr5 (94-141)||(34473132-34473179)
chr5 (73-141)||(15780713-15780780)
chr5 (94-141)||(7793078-7793125)
chr5 (94-141)||(7793220-7793267)
chr5 (94-141)||(36372103-36372150)
chr5 (94-141)||(36996766-36996813)
chr5 (175-205)||(36372181-36372211)
chr5 (175-205)||(36996844-36996874)
chr5 (75-141)||(37584401-37584466)
[»] chr2 (3 HSPs)
chr2 (23-207)||(5872479-5872664)
chr2 (74-141)||(21751695-21751761)
chr2 (94-141)||(21756224-21756271)
[»] chr8 (10 HSPs)
chr8 (23-207)||(22158036-22158220)
chr8 (23-207)||(25854191-25854376)
chr8 (23-207)||(32005251-32005436)
chr8 (61-207)||(22087786-22087930)
chr8 (94-207)||(20732430-20732543)
chr8 (129-205)||(16065433-16065509)
chr8 (65-141)||(22087724-22087799)
chr8 (81-141)||(20732568-20732628)
chr8 (75-141)||(20732628-20732693)
chr8 (75-141)||(20732770-20732835)
[»] scaffold0306 (1 HSPs)
scaffold0306 (23-207)||(20669-20853)
[»] chr7 (28 HSPs)
chr7 (23-207)||(34133994-34134178)
chr7 (23-141)||(22084415-22084538)
chr7 (78-189)||(15767890-15767998)
chr7 (73-205)||(42632276-42632413)
chr7 (128-209)||(844768-844849)
chr7 (128-209)||(851944-852025)
chr7 (128-209)||(1209948-1210029)
chr7 (74-205)||(9473204-9473335)
chr7 (14-141)||(794476-794609)
chr7 (61-141)||(16266307-16266391)
chr7 (74-205)||(16389533-16389665)
chr7 (128-207)||(16267315-16267395)
chr7 (74-204)||(23879474-23879604)
chr7 (94-141)||(16266993-16267040)
chr7 (75-141)||(3425178-3425243)
chr7 (17-141)||(12592458-12592582)
chr7 (156-205)||(8816545-8816594)
chr7 (81-141)||(15767821-15767880)
chr7 (74-205)||(30366080-30366210)
chr7 (74-141)||(9473340-9473406)
chr7 (63-141)||(30365997-30366075)
chr7 (129-207)||(12589870-12589940)
chr7 (60-141)||(16266817-16266897)
chr7 (109-141)||(12590253-12590285)
chr7 (94-141)||(3425249-3425296)
chr7 (94-141)||(16266273-16266320)
chr7 (75-141)||(3425302-3425367)
chr7 (94-143)||(3425073-3425122)
[»] chr6 (11 HSPs)
chr6 (23-207)||(22774071-22774256)
chr6 (60-207)||(19718662-19718809)
chr6 (78-189)||(1548293-1548401)
chr6 (74-205)||(24144717-24144847)
chr6 (74-205)||(20041917-20042048)
chr6 (81-141)||(1548411-1548470)
chr6 (132-207)||(27069260-27069335)
chr6 (14-90)||(12390081-12390157)
chr6 (129-185)||(20051947-20052003)
chr6 (14-84)||(12390637-12390708)
chr6 (21-90)||(12389901-12389970)
[»] chr3 (27 HSPs)
chr3 (23-207)||(8611247-8611432)
chr3 (23-207)||(23282982-23283167)
chr3 (21-207)||(73164-73350)
chr3 (17-141)||(3683047-3683171)
chr3 (74-205)||(5947026-5947157)
chr3 (94-205)||(8622552-8622663)
chr3 (75-141)||(30019990-30020055)
chr3 (74-205)||(46394519-46394650)
chr3 (75-141)||(3683112-3683177)
chr3 (75-141)||(3683414-3683479)
chr3 (74-205)||(37256967-37257098)
chr3 (75-141)||(3683195-3683260)
chr3 (75-141)||(30019801-30019866)
chr3 (94-141)||(3683278-3683325)
chr3 (61-141)||(20447228-20447313)
chr3 (65-141)||(46384306-46384382)
chr3 (17-141)||(3682976-3683106)
chr3 (94-141)||(5946974-5947021)
chr3 (74-141)||(6200675-6200741)
chr3 (94-141)||(20447300-20447347)
chr3 (175-205)||(6200545-6200575)
chr3 (129-195)||(15625879-15625945)
chr3 (175-205)||(46384245-46384275)
chr3 (94-143)||(30019935-30019984)
chr3 (94-143)||(30020111-30020160)
chr3 (94-143)||(30020163-30020212)
chr3 (15-75)||(13000374-13000434)
[»] chr4 (26 HSPs)
chr4 (23-207)||(15572813-15572997)
chr4 (23-207)||(15894073-15894257)
chr4 (23-207)||(3383407-3383591)
chr4 (23-141)||(14923883-14924001)
chr4 (75-207)||(14895677-14895806)
chr4 (61-141)||(14923817-14923896)
chr4 (61-141)||(14890757-14890835)
chr4 (61-141)||(14890692-14890770)
chr4 (61-141)||(14896023-14896099)
chr4 (61-141)||(14895895-14895973)
chr4 (1-141)||(14896212-14896349)
chr4 (61-141)||(14896530-14896608)
chr4 (75-141)||(14896666-14896729)
chr4 (94-141)||(3364331-3364378)
chr4 (132-207)||(9189749-9189824)
chr4 (61-138)||(14895963-14896036)
chr4 (64-141)||(14896149-14896222)
chr4 (73-141)||(14896086-14896151)
chr4 (128-207)||(3364079-3364159)
chr4 (75-141)||(14890822-14890887)
chr4 (75-141)||(14895818-14895883)
chr4 (73-141)||(14896334-14896401)
chr4 (75-141)||(3365579-3365645)
chr4 (94-138)||(14896598-14896642)
chr4 (60-141)||(3364474-3364554)
chr4 (81-141)||(14896399-14896459)
[»] chr1 (12 HSPs)
chr1 (23-207)||(35074583-35074767)
chr1 (21-207)||(2337011-2337197)
chr1 (17-207)||(14814673-14814867)
chr1 (123-207)||(6198792-6198876)
chr1 (61-141)||(14814654-14814732)
chr1 (75-141)||(14814602-14814667)
chr1 (61-137)||(14814431-14814511)
chr1 (77-141)||(14814322-14814385)
chr1 (81-141)||(14814385-14814444)
chr1 (94-141)||(5625213-5625260)
chr1 (175-205)||(5625291-5625321)
chr1 (81-137)||(14814515-14814570)
[»] scaffold0551 (3 HSPs)
scaffold0551 (61-205)||(248-388)
scaffold0551 (62-141)||(125-202)
scaffold0551 (81-141)||(202-261)
[»] scaffold0243 (2 HSPs)
scaffold0243 (60-207)||(19840-19991)
scaffold0243 (23-141)||(19977-20101)
[»] scaffold0503 (1 HSPs)
scaffold0503 (62-207)||(7502-7645)
[»] scaffold0770 (2 HSPs)
scaffold0770 (21-141)||(597-717)
scaffold0770 (61-207)||(462-610)
[»] scaffold0029 (2 HSPs)
scaffold0029 (21-141)||(98901-99021)
scaffold0029 (61-207)||(98766-98914)
[»] scaffold0357 (9 HSPs)
scaffold0357 (16-207)||(11804-11999)
scaffold0357 (17-141)||(12279-12403)
scaffold0357 (17-141)||(12142-12266)
scaffold0357 (61-141)||(12481-12559)
scaffold0357 (78-141)||(12207-12269)
scaffold0357 (78-141)||(12344-12406)
scaffold0357 (81-141)||(12011-12070)
scaffold0357 (94-142)||(12545-12593)
scaffold0357 (61-141)||(12416-12494)
[»] scaffold0081 (3 HSPs)
scaffold0081 (75-206)||(57965-58095)
scaffold0081 (61-141)||(58101-58183)
scaffold0081 (78-141)||(58170-58232)
[»] scaffold0816 (1 HSPs)
scaffold0816 (123-207)||(4840-4924)
[»] scaffold0004 (1 HSPs)
scaffold0004 (129-207)||(189293-189371)
[»] scaffold2005 (1 HSPs)
scaffold2005 (74-204)||(140-270)
[»] scaffold0138 (1 HSPs)
scaffold0138 (78-141)||(3180-3242)
[»] scaffold1767 (1 HSPs)
scaffold1767 (129-199)||(1141-1211)
[»] scaffold0278 (3 HSPs)
scaffold0278 (16-90)||(20778-20852)
scaffold0278 (16-90)||(16528-16602)
scaffold0278 (16-90)||(19862-19936)
[»] scaffold0361 (1 HSPs)
scaffold0361 (67-141)||(98-171)
[»] scaffold0014 (2 HSPs)
scaffold0014 (17-90)||(180159-180232)
scaffold0014 (1-91)||(180905-180994)
[»] scaffold0132 (1 HSPs)
scaffold0132 (131-199)||(28924-28992)
[»] scaffold0125 (1 HSPs)
scaffold0125 (17-90)||(14686-14759)


Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 29899825 - 29899640
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29899825 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcacggctt 29899726  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29899725 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 29899640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 20094500 - 20094685
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20094500 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcacggctt 20094599  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  20094600 cacgccggggaagacactttgacaataagaaggtaaatgaaagaggcttatttgtagaaacttgcggcttgacacaatggcaagtt 20094685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 25531867 - 25531682
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  25531867 ttgaaattgactggtgacaccacttgcacagctaccgctggggatggcactttttgaaattgaaattgaagtctgattagtgtcatgactagcatggctt 25531768  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25531767 cacgcgggggatgacactttgacaataaaaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 25531682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 22952603 - 22952681
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||||  |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  22952603 gggatgacactttgatgataagaaggtaaatggaagatgttcatttgtagaaacttgcggcttgacacaatggtaagtt 22952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 7255971 - 7256108
Alignment:
Q  73 ttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagag 166  Q
    ||||||||||||||||||| |     |||| ||||| ||| | ||||||||||| |||||||||||||||||||   |||  |||| | ||||||||||     
T  7255971 ttttgaaattgaaattgaaatagacattgattagtgacataattagcacggctttacgccggggatgacacttttgaaatt-gaagttgaaatggaagac 7256069  T
Q  167 gcttatttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  7256070 gctcatttgtagaaacttgcggcttgacacaatggtaag 7256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 15780785 - 15780916
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt--aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||   |||  |||  |  |||||||||| ||| |    
T  15780785 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttg-aatttgaaatttgaaatggaagacgctca 15780882  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  15780883 tttgtagaaacttgcggcttgacacaatggtaag 15780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 31524395 - 31524264
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagaggcttat 172  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||   |||   ||  | |||||||||| ||| |     
T  31524395 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttgaaattgaaatttgaaatggaagacgctcac 31524297  T
Q  173 ttgtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||||    
T  31524296 ttgtagaaacttgcggcttgacacaatggtaag 31524264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 7793073 - 7792942
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt--aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||| ||||||   |||  |||  |  |||||||||| ||| |    
T  7793073 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatggcacttttg-aatttgaaatttgaaatggaagacgctca 7792976  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  7792975 tttgtagaaacttgcggcttgacacaatggtaag 7792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 24063214 - 24063279
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  24063214 ttgaaattgaaatggaaatt-gactagtgtcatgactagaacggcttcacgccggggatgacacttt 24063279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 24063090 - 24063155
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| ||| || |||||||||| ||||||| |||||||||||||||||||||||||||    
T  24063090 ttgaaattgaaatggaaatt-gactagtgtcgtgactagaacggcttcacgccggggatgacacttt 24063155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 11940540 - 11940671
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| |||||    
T  11940540 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttg-aatttgaagttgaaatggaagacgctta 11940637  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||| ||| ||||||||||    
T  11940638 tttgtagaaacttgcggctcgacgcaatggtaag 11940671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 7793215 - 7793149
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  7793215 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttt 7793149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 7793357 - 7793291
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  7793357 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttt 7793291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 34473179 - 34473132
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  34473179 ttgactagtgtcatgactagaacggctttacgccgggaatgacacttt 34473132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 15780713 - 15780780
Alignment:
Q  73 ttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||| |||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  15780713 ttttgaaattgagattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttt 15780780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 7793125 - 7793078
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  7793125 ttgattagtgacataactagcacggctttacgccggggatgacacttt 7793078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 7793267 - 7793220
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  7793267 ttgattagtgacataactagcacggctttacgccggggatgacacttt 7793220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 36372103 - 36372150
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  36372103 ttgattagtgacataactagcacggctttacgccggggatgacacttt 36372150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 36996766 - 36996813
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  36996766 ttgattagtgacataactagcacggctttacgccggggatgacacttt 36996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 36372181 - 36372211
Alignment:
Q  175 gtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||    
T  36372181 gtagaaacttgcggcttgacacaatggtaag 36372211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 36996844 - 36996874
Alignment:
Q  175 gtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||    
T  36996844 gtagaaacttgcggcttgacacaatggtaag 36996874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 37584466 - 37584401
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  |||| ||||| |||| || ||||||||| |||||||| ||||||||||    
T  37584466 ttgaaattgaaattgaa-attgattagtgacatggcttgcacggctttacgccgggtatgacacttt 37584401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 5872479 - 5872664
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5872479 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcacggctt 5872578  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5872579 cacgctggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 5872664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 21751695 - 21751761
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||| || || ||||| |||| |||||||||||| | |||||| ||||||||||    
T  21751695 tttgaaattgaaattgaaatt-gattagtgacatggctagcacggctttatgccgggtatgacacttt 21751761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 21756224 - 21756271
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| ||| |||||| |||||||||| |||||    
T  21756224 ttgactagtgtcatgactagaacgacttcactccggggatgatacttt 21756271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 22158036 - 22158220
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22158036 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcacggctt 22158135  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22158136 cacgccggggatgacactttgacaa-aagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 22158220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 25854191 - 25854376
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  25854191 ttgaaattgacttgtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtttgattaatgtcatgactagcagggctt 25854290  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25854291 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 25854376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 32005436 - 32005251
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  32005436 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgtcactttttgaaattgaaattgaagtttggttagtgtcatgactagcatggctt 32005337  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32005336 cacgccggggaagacactttgacaataagaaggtaaatgaaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 32005251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 22087786 - 22087930
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatg 160  Q
    ||||||||||||||| ||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22087786 ggggatgacactttt-gaaattgaaattgaaatt-gattagtgacatgactagcacggcttcacgccggggatgacactttgatgataagaaggtaaatg 22087883  T
Q  161 gaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||| | |||||||||||||||||||| ||||||||||||||||||||    
T  22087884 gaaaacgcttatttgtagaaacttgcagcttgacacaatggtaagtt 22087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 20732543 - 20732430
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttga 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||   |||||||||||||||  || |||||||||||||||||||||||    
T  20732543 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttttgaaattgaaaggtaaatggaagattctcatttgtagaaacttgcggcttga 20732444  T
Q  194 cacaatggtaagtt 207  Q
    ||||| ||||||||    
T  20732443 cacaacggtaagtt 20732430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 16065509 - 16065433
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||  ||||||||||||||| |||| | | |||||||||||||||||||||||||||||| ||||    
T  16065509 gggatgacactttgatgataagaaggtaaatgcaagatgttcatttgtagaaacttgcggcttgacacaatgataag 16065433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 22087724 - 22087799
Alignment:
Q  65 atgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| ||||| |||||||||  |||||||||| ||||||||||  |||||||||||||||||||||||||    
T  22087724 atgacacttttggaaat-gaaattgaaaattgactagtgacatgactagccaggcttcacgccggggatgacacttt 22087799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 20732628 - 20732568
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgc-cggggatgacacttt 141  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20732628 ttgaaattgaaatt-gactagtgtcatgactagcacggcttcacgcgcggggatgacacttt 20732568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 20732693 - 20732628
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||| || || ||||| ||||||||||||||||| |||||| ||||||||||||    
T  20732693 ttgaaattgaaattgaaatt-gattagtgacatgactagcacggctttacgccgaggatgacacttt 20732628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 20732835 - 20732770
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| |||||||||||| || || ||||| ||||||||||||| |||||| ||||||||||||||||    
T  20732835 ttgagattgaaattgaaatt-gattagtgacatgactagcacgacttcacaccggggatgacacttt 20732770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 20853 - 20669
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20853 ttgaaattgactggtgacaccacttgcacagctaccactggggatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcacggctt 20754  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20753 cacgctggggatgacactttgacaa-aagaagataaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 20669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 8e-82; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 34133994 - 34134178
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  34133994 ttgaaattgactggtgacaccacttgcacagctaccgctggtgatgacactttttgaaattgaaattgaagtttgattagtgtcatgactagcaaggctt 34134093  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34134094 cacgccggggatgacactttgacaa-aagaaggtaaatggaagaggcttatttgtagaaacttgtggcttgacacaatggtaagtt 34134178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 22084538 - 22084415
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttt-----tgaaattgaaattgaagtttgactagtgtcatgactagcac 116  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||     ||||||||||||||||||| || ||||||||||||||||||    
T  22084538 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacacttttgaaattgaaattgaaattgaagtt-gattagtgtcatgactagcac 22084440  T
Q  117 ggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||| |||||    
T  22084439 ggcttcacgccggggatgatacttt 22084415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 15767890 - 15767998
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgta 177  Q
    |||||||||||||   ||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||    
T  15767890 aaattgaaattga---ttgaccagtgtcatgactagcacggctttacgccggggatgacactttgatgataagaaggtaaatggaagacacttatttata 15767986  T
Q  178 gaaacttgcggc 189  Q
    ||||||||||||    
T  15767987 gaaacttgcggc 15767998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 42632276 - 42632413
Alignment:
Q  73 ttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagag 166  Q
    ||||||||||||||||||| |     |||| ||||| ||| | ||||||||||| |||||||||||||||||||   |||  |||| | ||||||||||     
T  42632276 ttttgaaattgaaattgaaatagacattgattagtgacataattagcacggctttacgccggggatgacacttttg-aatttgaagttgaaatggaagac 42632374  T
Q  167 gcttatttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  42632375 gctcatttgtagaaacttgcggcttgacacaatggtaag 42632413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 844849 - 844768
Alignment:
Q  128 ggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagttta 209  Q
    ||||||||||||||||  |||||||||||||| ||||| | | |||||||||||||||||||||||||||||  ||||||||    
T  844849 ggggatgacactttgatgataagaaggtaaatagaagatgttcatttgtagaaacttgcggcttgacacaataataagttta 844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 852025 - 851944
Alignment:
Q  128 ggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagttta 209  Q
    ||||||||||||||||  |||||||||||||| ||||| | | |||||||||||||||||||||||||||||  ||||||||    
T  852025 ggggatgacactttgatgataagaaggtaaatagaagatgttcatttgtagaaacttgcggcttgacacaataataagttta 851944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 1210029 - 1209948
Alignment:
Q  128 ggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagttta 209  Q
    ||||||||||||||||  |||||||||||||| ||||| | | |||||||||||||||||||||||||||||  ||||||||    
T  1210029 ggggatgacactttgatgataagaaggtaaatagaagatgttcatttgtagaaacttgcggcttgacacaataataagttta 1209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 9473335 - 9473204
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt--aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||   |||  |||  |  |||||||||  ||| |    
T  9473335 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttg-aatttgaaatttgaaatggaaggcgctca 9473238  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  9473237 tttgtagaaacttgcggcttgacacaatggtaag 9473204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 794476 - 794609
Alignment:
Q  14 cttttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagt-----ttgactagtgtcat 107  Q
    ||||||||| ||||||||| | |||||| || | |||||||||||| |||||||||||||||||||| ||||| ||||| |     |||| ||||| |||    
T  794476 cttttgaaactgaaattgattagtgacatcagtggcacagctaccgctggggatgacactttttgaatttgaatttgaaattgaaattgattagtgacat 794575  T
Q  108 gactagcacggcttcacgccggggatgacacttt 141  Q
    | |||||||||||| | |||||| ||||||||||    
T  794576 ggctagcacggctttatgccgggtatgacacttt 794609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 16266307 - 16266391
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| ||||||||||||||| |     |||||||||||||||||||| |||||||||||||||| ||||||||||    
T  16266307 ggggatgacactttt-gaaattgaaattgaaatggaaattgactagtgtcatgactagaacggcttcacgccgggaatgacacttt 16266391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 16389533 - 16389665
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacac-tttgacaataagaaggtaaatggaagaggcttat 172  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||| ||||| | | | |    |||||||||| ||| ||    
T  16389533 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttgaaattgaaatttgaaatggaagacgctcat 16389631  T
Q  173 ttgtag-aaacttgcggcttgacacaatggtaag 205  Q
    |||||| |||||||||||||||||||||||||||    
T  16389632 ttgtagaaaacttgcggcttgacacaatggtaag 16389665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 16267315 - 16267395
Alignment:
Q  128 ggggatgacac-tttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||| |||||  ||||||||||||||| |||| | ||||||||||||||||||||||| |||||||| ||||||    
T  16267315 ggggatgacacctttgatgataagaaggtaaatgcaagatgtttatttgtagaaacttgcggctttacacaatgataagtt 16267395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 23879474 - 23879604
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| ||| |    
T  23879474 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttg-aatttgaagttgaaatggaagacgctca 23879571  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaa 204  Q
    |||||||||||||||||||||||||||||||||    
T  23879572 tttgtagaaacttgcggcttgacacaatggtaa 23879604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 16266993 - 16267040
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16266993 ttgactagtgtcatgactagaacggcttcacgccggggatgacacttt 16267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 3425178 - 3425243
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| ||| || |||||||||||||||||| | |||||||||||||||||||||||||    
T  3425178 ttgaaattgaaatggaaatt-gactagtgtcatgactagaatggcttcacgccggggatgacacttt 3425243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 12592582 - 12592458
Alignment:
Q  17 ttgaaattgaaa-ttgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagc 114  Q
    |||||||||||| |||||| |||||| || | ||||||||   | |||||||||||||||| || ||||||||||||||| || ||||| ||||||||||    
T  12592582 ttgaaattgaaaattgactagtgacatcagtggcacagcttttgctggggatgacactttt-gagattgaaattgaagtt-gattagtgacatgactagc 12592485  T
Q  115 acggcttcacgccggggatgacacttt 141  Q
    ||| ||||||||| |||| ||||||||    
T  12592484 acgacttcacgccagggacgacacttt 12592458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 8816594 - 8816545
Alignment:
Q  156 aaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8816594 aaatggaagacgctcatttgtagaaacttgcggcttgacacaatggtaag 8816545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 15767821 - 15767880
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  15767821 ttgaaattgaaatt-gattagtggcatgactagcacggcttcacgccggggatgacacttt 15767880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 30366080 - 30366210
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagaggcttat 172  Q
    |||||||||||||||||  |  || ||||| ||| ||||||||| ||| |||||||||||||||||||   |||  |||| | |||||||| | ||| ||    
T  30366080 tttgaaattgaaattgacatc-gattagtgacataactagcacgactttacgccggggatgacacttttgaaatt-gaagttgaaatggaaaacgctcat 30366177  T
Q  173 ttgtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||| ||||||    
T  30366178 ttgtagaaacttgcggcttgacacaacggtaag 30366210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 9473406 - 9473340
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  9473406 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttt 9473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 30365997 - 30366075
Alignment:
Q  63 ggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggc-ttcacgccggggatgacacttt 141  Q
    ||||||||||||||||| |||||||||||  |||| ||||| ||| ||||||||||| ||  ||||||||||||||||||    
T  30365997 ggatgacactttttgaatttgaaattgaa-attgattagtgacataactagcacggctttttcgccggggatgacacttt 30366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 12589940 - 12589870
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||||  ||||||||||||||| ||||        ||||||||||||||||||||||||||| ||||||    
T  12589940 gggatgacactttgatgataagaaggtaaatgtaaga--------tgtagaaacttgcggcttgacacaatgataagtt 12589870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 16266817 - 16266897
Alignment:
Q  60 tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| || ||  |||||||||||  |||| ||||| |||| |||||||||||| |||||||| ||||||||||    
T  16266817 tggggatgacactattggat-ttgaaattgaaaattgattagtgacatggctagcacggctttacgccgggtatgacacttt 16266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 12590285 - 12590253
Alignment:
Q  109 actagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||||||||||||||||    
T  12590285 actagcacggcttcacgccggggatgacacttt 12590253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 3425249 - 3425296
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  3425249 ttgattagtgacatcactagcacggctttacgccggggatgacacttt 3425296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 16266273 - 16266320
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  16266273 ttgattagtgacatcactagcacggctttacgccggggatgacacttt 16266320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 3425302 - 3425367
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  |||| ||||| |||| ||||||| |||| |||||||| ||||||||||    
T  3425302 ttgaaattgaaattgaa-attgattagtgacatggctagcacagctttacgccgggcatgacacttt 3425367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 3425073 - 3425122
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttga 143  Q
    |||| ||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  3425073 ttgattagtgacatcactagcacggctttacgccggggacgacactttga 3425122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 22774071 - 22774256
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||    
T  22774071 ttgaaattgactggtgacaccacttgcacaactaccgctggggatgacactttttgaatttgaaattgaaatttgattagtgtaatgactagcacggctt 22774170  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22774171 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacataatggtaagtt 22774256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 19718809 - 19718662
Alignment:
Q  60 tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaat 159  Q
    ||||||||||||| ||   | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19718809 tggggatgacactattgagagttgaaattgaagtttgattagtgtcatgactagcacggcttcacaccggggatgacactttgacaataagaaggtaaat 19718710  T
Q  160 ggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19718709 ggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 19718662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 1548401 - 1548293
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgta 177  Q
    |||||||||||||   ||||| |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||    
T  1548401 aaattgaaattga---ttgaccagtgtcatgactagcacggctttacgccggggatgacactttgatgataagaaggtaaatggaagacacttatttata 1548305  T
Q  178 gaaacttgcggc 189  Q
    ||||||||||||    
T  1548304 gaaacttgcggc 1548293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 24144717 - 24144847
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagaggcttat 172  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||   |||  |||| | |||||||||| ||| ||    
T  24144717 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttgaaatt-gaagttgaaatggaagacgctcat 24144814  T
Q  173 ttgtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||||    
T  24144815 ttgtagaaacttgcggcttgacacaatggtaag 24144847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 20041917 - 20042048
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| ||| |    
T  20041917 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttg-aatttgaagttgaaatggaagacgctca 20042014  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  20042015 tttgtagaaacttgcggcttgacacaatggtaag 20042048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 1548470 - 1548411
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  1548470 ttgaaattgaaatt-gattagtggcatgactagcacggcttcacgccggggatgacacttt 1548411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 27069260 - 27069335
Alignment:
Q  132 atgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||| |  |||||||||||||| ||||| | | ||||||||||||||||||||||||||| || ||||||    
T  27069260 atgacactttaatgataagaaggtaaatagaagatgttcatttgtagaaacttgcggcttgacacattgttaagtt 27069335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 12390157 - 12390081
Alignment:
Q  14 cttttgaaattgaaattgactggtgacaccacttgcacagctaccgt-ggggatgacactttttgaaattgaaattga 90  Q
    ||||||||||||||||||||| |||||| || | | ||||||||||| ||||||||||| ||||| ||||||||||||    
T  12390157 cttttgaaattgaaattgactagtgacatcagtggtacagctaccgtcggggatgacac-ttttggaattgaaattga 12390081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 20051947 - 20052003
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttg 185  Q
    |||||||||||||||  |||||||||||||||||||| | | |||||||||||||||    
T  20051947 gggatgacactttgatgataagaaggtaaatggaagatgttcatttgtagaaacttg 20052003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 12390708 - 12390637
Alignment:
Q  14 cttttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattga 84  Q
    ||||||||||||||||||| | |||||| || | |||||||||||| |||||||||| | ||||||||||||    
T  12390708 cttttgaaattgaaattgattagtgacatcagtggcacagctaccgctggggatgacgccttttgaaattga 12390637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 12389970 - 12389901
Alignment:
Q  21 aattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    |||||||||||||| |||||| || | ||||| |||||| || ||||||||| ||||||||||||||||||    
T  12389970 aattgaaattgactagtgacatcagtggcacaactaccgctgaggatgacac-ttttgaaattgaaattga 12389901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 8e-82; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 8611432 - 8611247
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||||    
T  8611432 ttgaaattgactggtgacaccacttgcacagctactgctggggatgacactttttgaaattgaaattgattagtgattagtgtcatgactagcacggctt 8611333  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8611332 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 8611247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 23282982 - 23283167
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||    
T  23282982 ttgaaattgtctggtgacaccacttgcacagctaccgctggggatgacactttttgaatttgagattgaaatttgattagtgtcatgactagcacggctt 23283081  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23283082 cccgctggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 23283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 21 - 207
Target Start/End: Complemental strand, 73350 - 73164
Alignment:
Q  21 aattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggc 119  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||    
T  73350 aattgaaattgattggtgacaccacttgcacagctaccgctggggatgacactttttggaattgaaattgaagtttgattagtgtcatgactagcacagc 73251  T
Q  120 ttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  73250 ttcacgctggggatgacactttga-aaaaagaaggtaaatggaagaggcttatttgtagaaacttgtggcttgacacaatggtaagtt 73164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 3683171 - 3683047
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagc 114  Q
    |||||||||||||||| | |||||| |||| |||| |||  ||   ||||||||||||||| ||||||||||||||| || || ||||| ||| ||||||    
T  3683171 ttgaaattgaaattgattagtgacatcactagcacggcttcacgccggggatgacactttt-gaaattgaaattgaaatt-gattagtgacatcactagc 3683074  T
Q  115 acggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||||||||||    
T  3683073 acggcttcacgccggggatgacacttt 3683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 5947026 - 5947157
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt--aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||   |||  |||  |  |||||||||| ||| |    
T  5947026 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttttg-aatttgaaatttgaaatggaagacgctca 5947123  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  5947124 tttgtagaaacttgcggcttgacacaatggtaag 5947157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 8622663 - 8622552
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggt-aaatggaagaggcttatttgtagaaacttgcggcttg 192  Q
    |||| ||||| ||| | ||||||||||| |||||||||||||||||||   |||  |||| | |||||||||| ||| ||||||||||||||||||||||    
T  8622663 ttgattagtgacataattagcacggctttacgccggggatgacacttttg-aatttgaagttgaaatggaagacgctcatttgtagaaacttgcggcttg 8622565  T
Q  193 acacaatggtaag 205  Q
    |||||||||||||    
T  8622564 acacaatggtaag 8622552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 30020055 - 30019990
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  30020055 ttgaaattgaaatggaaatt-gactagtgtcatgactagaacggcttcacgccggggatgacacttt 30019990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 46394519 - 46394650
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| ||| |    
T  46394519 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttgaaatt-gaagttgaaatggaagacgctca 46394616  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||||||||||||||||||    
T  46394617 tttgtagaaacttgcggcttgacacaatggtaag 46394650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 3683177 - 3683112
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||||    
T  3683177 ttgaaattgaaattgaaatt-gattagtgacatcactagcacggcttcacgccggggatgacacttt 3683112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 3683479 - 3683414
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| ||| || |||||||||||||||||| | |||||||||||||||||||||||||    
T  3683479 ttgaaattgaaatggaaatt-gactagtgtcatgactagaatggcttcacgccggggatgacacttt 3683414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 37256967 - 37257098
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| |||||    
T  37256967 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttg-aatttgaagttgaaatggaagacgctta 37257064  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||||||||||||||||| ||||||| ||||||    
T  37257065 tttgtagaaacttgcggctcgacacaacggtaag 37257098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 3683260 - 3683195
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| |||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||||    
T  3683260 ttgacattgaaattgaaatt-gattagtgacatcactagcacggcttcacgccggggatgacacttt 3683195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 30019866 - 30019801
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| |||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||||    
T  30019866 ttgacattgaaattgaaatt-gattagtgacatcactagcacggcttcacgccggggatgacacttt 30019801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 3683325 - 3683278
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  3683325 ttgattagtgacatcactagcacggcttcacgccggggatgacacttt 3683278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 20447313 - 20447228
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcac-ggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| ||||||||||||||| |     |||||||||||||||||||| |  ||||| |||||||||||||||||||    
T  20447313 ggggatgacactttt-gaaattgaaattgaaatggaaattgactagtgtcatgactagaaatggctttacgccggggatgacacttt 20447228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 46384382 - 46384306
Alignment:
Q  65 atgacactttttgaaatt-gaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||| |||||||||| ||||||||  || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  46384382 atgacaccttttgaaatttgaaattgacatt-gattagtgacataactagcacggctttacgccggggatgacacttt 46384306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 3683106 - 3682976
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttt-----tgaaattgaaattgaagtttgactagtgtcatga 109  Q
    |||||||||||||||| | |||||| |||| |||| |||  ||   |||||||||||||||     ||||||||||||||||  |||| ||||| ||||     
T  3683106 ttgaaattgaaattgattagtgacatcactagcacggcttcacgccggggatgacacttttgaaattgaaattgaaattgaa-attgattagtgacatgg 3683008  T
Q  110 ctagcacggcttcacgccggggatgacacttt 141  Q
    ||||||| |||| |||||||| ||||||||||    
T  3683007 ctagcacagctttacgccgggcatgacacttt 3682976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 5946974 - 5947021
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  5946974 ttgattagtgacataactagcacggctttacgccggggatgacacttt 5947021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 6200741 - 6200675
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||  || || ||||| ||| ||||||| ||||| |||||||||||||||||||    
T  6200741 tttgaaattgaaattgacatt-gattagtgacataactagcatggctttacgccggggatgacacttt 6200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 20447347 - 20447300
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  20447347 ttgattagtgacatcactagcacggctttacgccggggatgacacttt 20447300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 6200575 - 6200545
Alignment:
Q  175 gtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||    
T  6200575 gtagaaacttgcggcttgacacaatggtaag 6200545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 15625945 - 15625879
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgaca 195  Q
    |||| ||||||||||  ||||||||||||||| |||| | | |||||| ||||||||||| ||||||    
T  15625945 gggaggacactttgatgataagaaggtaaatgcaagatgttcatttgtggaaacttgcgggttgaca 15625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 46384275 - 46384245
Alignment:
Q  175 gtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||    
T  46384275 gtagaaacttgcggcttgacacaatggtaag 46384245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 30019984 - 30019935
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttga 143  Q
    |||| ||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  30019984 ttgattagtgacatcactagcacggctttacgccggggacgacactttga 30019935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 30020160 - 30020111
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttga 143  Q
    |||| ||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  30020160 ttgattagtgacatcactagcacggctttacgccggggacgacactttga 30020111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 30020212 - 30020163
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttga 143  Q
    |||| ||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  30020212 ttgattagtgacatcactagcacggctttacgccggggacgacactttga 30020163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 13000374 - 13000434
Alignment:
Q  15 ttttgaaattgaaattgactggtgacaccacttgcacagctaccgtggggatgacactttt 75  Q
    |||||||||||||||||||| |||||| ||||   ||| ||||  ||||||||||||||||    
T  13000374 ttttgaaattgaaattgactagtgacatcactgaaacaactacattggggatgacactttt 13000434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 15572813 - 15572997
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15572813 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtt-gattagtgtcatgactagcacggctt 15572911  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
     ||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15572912 tacgtcggggatgacactttgataataagaaggtaattggaagacgcttatttgtagaaacttgcggcttgacacaatggtaagtt 15572997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 15894073 - 15894257
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15894073 ttgaaattgactggtgacacctctttcacagctaccgctggggatgacactttttgaaattgaaattgaa-tttgattagtgtcatgactagcacggctt 15894171  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  15894172 cacgccggggatgacactttgataataagaaggtaaatagaagacgcttatttgtagaaacttgcggcttgacacaatggtaagtt 15894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 3383407 - 3383591
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||    
T  3383407 ttgaaattgactggtgacaccacttgcacagctactgctggggatgacacgttttgaaattgaaattgaagtt-gattggtgtcatgactagcacggctt 3383505  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
     |||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  3383506 tacgccggggatgacactttgatgataagaaggtaaatggaagacacttatttgtagaaacttgctgcttgacacaatggtaagtt 3383591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 14924001 - 14923883
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||    
T  14924001 ttgaaattgactggtgacatcacttgcacagctaccgctggggatgacactttttgaaattgaaattgaagtt-gattagtgtcatgactagcacgactt 14923903  T
Q  122 cacgccggggatgacacttt 141  Q
     |||||||||||||||||||    
T  14923902 tacgccggggatgacacttt 14923883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 207
Target Start/End: Complemental strand, 14895806 - 14895677
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttattt 174  Q
    |||||| |||||||||   ||||| ||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||| ||||||||    
T  14895806 ttgaaagtgaaattga---ttgaccagtgtcatgactagcacggcttcacaccgggaatgacactttgatgataagaaggtaaatggaagacgcttattt 14895710  T
Q  175 gtagaaacttgcggcttgacacaatggtaagtt 207  Q
    || ||||||||| ||||||||||||||||||||    
T  14895709 gttgaaacttgcagcttgacacaatggtaagtt 14895677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14923896 - 14923817
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  14923896 ggggatgacactttttgaaattgaaattgaagtt-gattagtgtcatgactagcacggctttacgccggggatgacacttt 14923817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14890835 - 14890757
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  14890835 ggggatgacactttt-gaaattgaaattgaagtt-gattagtgtcatgactagcacggctttacgccggggatgacacttt 14890757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14890770 - 14890692
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| ||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  14890770 ggggatgacactttt-gaaattgaaattgaaatt-gattagtgacatgactagcacggcttcacgccggggatgacacttt 14890692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14896099 - 14896023
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| || |||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14896099 ggggatgacactttt-gagattgaaattga---ttgaccagtgtcatgactagcacggcttcacgccggggatgacacttt 14896023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14895973 - 14895895
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| ||| ||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||    
T  14895973 ggggatgacaccttt-gaaattgaaattgaaatt-gattagtgtcatgactagcacggctttacgccggggatgacacttt 14895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 14896349 - 14896212
Alignment:
Q  1 ctggggataacaccttttgaaattgaaattgactggtgacaccacttgcacagctac-cgt-ggggatgacactttttgaaattgaaattgaagtttgac 98  Q
    |||||||| |||| |||||||||||||||||| | ||||||  ||| |||| ||| | ||| ||||||| ||||||| ||||||||||||||   |||||    
T  14896349 ctggggatgacac-ttttgaaattgaaattgattagtgacatgactagcacggcttcacgtcggggatggcactttt-gaaattgaaattga---ttgac 14896255  T
Q  99 tagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
     |||||||||||||||||||||||||||||  |||||||||||    
T  14896254 cagtgtcatgactagcacggcttcacgccgaagatgacacttt 14896212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 14896608 - 14896530
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| ||| ||||||||||||||| || || |||||||||||||||||||||||  ||||||||||||||||||    
T  14896608 ggggatgacaccttt-gaaattgaaattgaaatt-gattagtgtcatgactagcacggctttgcgccggggatgacacttt 14896530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 14896729 - 14896666
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||   ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  14896729 ttgaaattgaaattga---ttgaccagtgtcatgactagcacggcttcacgccagggatgacacttt 14896666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 3364378 - 3364331
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  3364378 ttgactagtgtcatgactagaacggcttcacgccggggatgacacttt 3364331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 9189824 - 9189749
Alignment:
Q  132 atgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||| || |||||||||||||| ||||| | | ||||||||||||||||||||||||||| || ||||||    
T  9189824 atgacactttaacgataagaaggtaaatagaagatgttcatttgtagaaacttgcggcttgacacattgttaagtt 9189749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 14896036 - 14895963
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacac 138  Q
    ||||||||||||||| ||||| ||||||||   ||||| |||| ||||||||||||||||||||||||||||||||||    
T  14896036 ggggatgacactttt-gaaatcgaaattga---ttgaccagtgacatgactagcacggcttcacgccggggatgacac 14895963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 14896222 - 14896149
Alignment:
Q  64 gatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||| |||||||||| |||   ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14896222 gatgacactttt-gaaattgaaagtga---ttgaccagtgtcatgactagcacggcttcacgccggggattacacttt 14896149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 14896151 - 14896086
Alignment:
Q  73 ttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||   ||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  14896151 ttttgaaattgaaattga---ttgaccagtttcatgactagcacggtttcacgccggggatgacacttt 14896086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 3364159 - 3364079
Alignment:
Q  128 ggggatgacacttt-gacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||| ||  ||||||||||||||| |||| | | ||||||||||||||||||||| |||||||| ||||||    
T  3364159 ggggatgacacttttgatgataagaaggtaaatgcaagatgttcatttgtagaaacttgcggctttacacaatgataagtt 3364079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 14890887 - 14890822
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||||  | ||||||||||||||||||| | | |||||||||||||||||||    
T  14890887 ttgaaattgaaattgaagtta-attagtgtcatgactagcacgaccttacgccggggatgacacttt 14890822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 14895883 - 14895818
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||| ||||||||||| || || |||||||||||||| |||||||| |||||||||||||||||||    
T  14895883 ttgaatttgaaattgaaatt-gattagtgtcatgactatcacggctttacgccggggatgacacttt 14895818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 14896401 - 14896334
Alignment:
Q  73 ttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||| || || ||||| ||||||||  |||||||||||| ||||||||||||||    
T  14896401 ttttgaaattgaaattgaaatt-gattagtgacatgactattacggcttcacgctggggatgacacttt 14896334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 3365645 - 3365579
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagt-gtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||| || ||||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  3365645 ttgaaattgaaattgaaatt-gactagttgtcatgactagaacggctttacgccgggaatgacacttt 3365579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 14896642 - 14896598
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacac 138  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||    
T  14896642 ttgattagtgacatgactagcacggcttcacaccggggatgacac 14896598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 3364554 - 3364474
Alignment:
Q  60 tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||| || ||  |||||||||||  |||  ||||| |||| |||||||||||| |||||||| ||||||||||    
T  3364554 tggggatgacactattggat-ttgaaattgaaaattggttagtgacatggctagcacggctttacgccgggtatgacacttt 3364474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 14896459 - 14896399
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||| ||  |||| ||||| ||||||||||||| ||| |||||||||| ||||||||    
T  14896459 ttgaaattcaaaattgattagtgacatgactagcacgactttacgccggggaagacacttt 14896399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 35074767 - 35074583
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggctt 121  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||    
T  35074767 ttgaaattgattggtgacaccacttgtacagctaccgctggggatgacactttttgagattgaaattgaggtttgattagtgtcatgactagcacggctt 35074668  T
Q  122 cacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35074667 cacgccggggatgacactttgacaa-aagaaggtgaatggaagaggcttatttgtagaaacttgtggcttgacacaatggtaagtt 35074583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 2337011 - 2337197
Alignment:
Q  21 aattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggc 119  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  2337011 aattgaaattgattggtgacaccacttgcacagctaccgctggggatgacactttttgaaattgaaattgaggtttggttagtgtcatgactagcacggc 2337110  T
Q  120 ttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2337111 ttcatgtcggggatgacactttgataa-aagaaggtaaatggaagaggcttatttgtagaaacttgtggcttggcacaatggtaagtt 2337197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 14814673 - 14814867
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttttgaaattgaaattgaagtt---tgactagtgtcatgact 111  Q
    |||||||||||||||| | ||||||  ||| ||||||||  ||   ||||||||||||||| ||||||||||||||| ||   |||| ||||||||||||    
T  14814673 ttgaaattgaaattgattagtgacatgactagcacagctttacgccggggatgacactttt-gaaattgaaattgaaattgattgaccagtgtcatgact 14814771  T
Q  112 agcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||||||||||||||||| ||||||  |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  14814772 agcacggcttcacgccggggatgacgctttgatgataaaaaggtaaatggaagatgctcatttgtagaaacttgcggcttgacacaatggtaagtt 14814867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 6198792 - 6198876
Alignment:
Q  123 acgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||| ||||||||||||||||  |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  6198792 acgctggggatgacactttgatgataagaaggtaaatggaagatgttcatttgtagaaacttgcggcttgacacaatggtaagtt 6198876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 14814654 - 14814732
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| |||||||||||||||  |||| ||||| |||||||||||| |||| |||||||||||||||||||    
T  14814654 ggggatgacactttt-gaaattgaaattgaa-attgattagtgacatgactagcacagctttacgccggggatgacacttt 14814732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 14814602 - 14814667
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||||| || || ||||| ||||||||||||||||| |||||||||||||||||||    
T  14814602 ttgaaattgaaattgaaatt-gattagtgacatgactagcacggctttacgccggggatgacacttt 14814667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 14814431 - 14814511
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcacggcttcacgccggggatgaca 137  Q
    |||||||||||||||  |||||||||||||| |     ||||| |||| |||||||||||||||||||||||||||||||||    
T  14814431 ggggatgacactttta-aaattgaaattgaaatattgattgaccagtgacatgactagcacggcttcacgccggggatgaca 14814511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 14814322 - 14814385
Alignment:
Q  77 gaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| || || ||||| ||||||||||||||||| |||||||||||| ||||||    
T  14814322 gaaattgaaattgaaatt-gattagtgacatgactagcacggctttacgccggggatgccacttt 14814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 14814385 - 14814444
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| || || ||||| |||||| |||||||||| |||||||||||||||||||    
T  14814385 ttgaaattgaaatt-gattagtgacatgaccagcacggctttacgccggggatgacacttt 14814444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 5625213 - 5625260
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||||    
T  5625213 ttgattagtgacataactagcacggctttacgccggggatgacacttt 5625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Original strand, 5625291 - 5625321
Alignment:
Q  175 gtagaaacttgcggcttgacacaatggtaag 205  Q
    |||||||||||||||||||||||||||||||    
T  5625291 gtagaaacttgcggcttgacacaatggtaag 5625321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 14814515 - 14814570
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgaca 137  Q
    ||||||||||| || || ||||| ||||||| ||||||||| |||||||||||||||    
T  14814515 ttgaaattgaaatt-gattagtgacatgactcgcacggctttacgccggggatgaca 14814570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 248 - 388
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatg 160  Q
    ||||||||||||||| ||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  248 ggggatgacactttt-gaaattgaaattga---ttgaccagtgtcatgactagcacggcttcacgccggggatgacactttaatgataagaaggtaaatg 343  T
Q  161 gaagaggcttatttgtagaaacttgcggcttgacacaatggtaag 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  344 gaagacgcttatttgtagaaacttgcggcttgacacaatggtaag 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 125 - 202
Alignment:
Q  62 gggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||| ||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  125 gggatgacactttt-gaaattgaaattgaaatt-gattagtgacatgactagcacggcttcacgccggggatgacacttt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0551; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 202 - 261
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| || || ||||| ||||||||||| | |||||||||||||||||||||||    
T  202 ttgaaattgaaatt-gattagtgacatgactagcatgacttcacgccggggatgacacttt 261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 19991 - 19840
Alignment:
Q  60 tggggatgacacttt-----ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaagg 154  Q
    |||||||||||||||     |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  19991 tggggatgacacttttgaaattgaaattgaaattgaag-ttgaatagtgtcatgactagcacggcttcacgccggggatgacactttgattataagaagg 19893  T
Q  155 taaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||  |||| | |||||||||||||||||||||||||||||||||||||||    
T  19892 taaataaaagacgtttatttgtagaaacttgcggcttgacacaatggtaagtt 19840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 20101 - 19977
Alignment:
Q  23 ttgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagt-----ttgactagtgtcatgactagcac 116  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | |     |||| ||||||||||||||||||    
T  20101 ttgaaattgactggtgacaccacttgcacagctaccgctggggatgacacattttgaaattgaaattgtaattgaagttgattagtgtcatgactagcac 20002  T
Q  117 ggcttcacgccggggatgacacttt 141  Q
    ||||| |  | ||||||||||||||    
T  20001 ggctttatactggggatgacacttt 19977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 7502 - 7645
Alignment:
Q  62 gggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatgg 161  Q
    |||||||||||||| ||||||||||||||| || || ||||| ||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||    
T  7502 gggatgacactttt-gaaattgaaattgaaatt-gattagtgacatgactagcacggctttacgctggggatgacactttgatgataagaaggtaaatgg 7599  T
Q  162 aagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||    
T  7600 aagatgctcatttgtagaaacttgcggcttgacacaatggtaagtt 7645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 717 - 597
Alignment:
Q  21 aattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggc 119  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||    
T  717 aattgaaattgactggtgacaccacttgcatagctaccgctggggatgacactttttgaaattgaaattgaaatt-gattagtgacatgactagcacggc 619  T
Q  120 ttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||||||    
T  618 ttcacgccggggatgacacttt 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 610 - 462
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtt---tgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaa 157  Q
    ||||||||||||||| | ||||||||||||| ||   ||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  610 ggggatgacactttt-gtaattgaaattgaaattgattgattagtgacatgactagcacggctttacgccggggatgacactttgataataagagggtaa 512  T
Q  158 atggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    || ||||| |||||||||||||||||||||| || |||||||||||||||    
T  511 atagaagatgcttatttgtagaaacttgcggtttaacacaatggtaagtt 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 99021 - 98901
Alignment:
Q  21 aattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggc 119  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||    
T  99021 aattgaaattgactggtgacaccacttgcatagctaccgctggggatgacactttttgaaattgaaattgaaatt-gattagtgacatgactagcacggc 98923  T
Q  120 ttcacgccggggatgacacttt 141  Q
    ||||||||||||||||||||||    
T  98922 ttcacgccggggatgacacttt 98901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 98914 - 98766
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtt---tgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaa 157  Q
    ||||||||||||||| | ||||||||||||| ||   ||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  98914 ggggatgacactttt-gtaattgaaattgaaattgattgattagtgacatgactagcacggctttacgccggggatgacactttgataataagagggtaa 98816  T
Q  158 atggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    || ||||| |||||||||||||||||||||| || |||||||||||||||    
T  98815 atagaagatgcttatttgtagaaacttgcggtttaacacaatggtaagtt 98766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 88; Significance: 2e-42; HSPs: 9)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 207
Target Start/End: Complemental strand, 11999 - 11804
Alignment:
Q  16 tttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttttgaaattgaaattgaagt---ttgactagtgtcatgac 110  Q
    ||||||||||||||||| | |||||| |||| |||| |||  ||   |||||||||||||||  |||||||||||||| |   ||||| ||||||||| |    
T  11999 tttgaaattgaaattgattagtgacagcactagcacggcttcacgccggggatgacactttta-aaattgaaattgaaatggattgaccagtgtcatggc 11901  T
Q  111 tagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    ||||||||||| ||| ||||||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  11900 tagcacggctttacgtcggggatgacacttttatgataagaaggtaaatggaagacgcttatttgtagaaacttgcggcttgacacaacggtaagtt 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 12403 - 12279
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagc 114  Q
    |||||||||||||||| | |||||| |||| |||| |||  ||   ||||||||||||||| ||||||||||||||| || || ||||| ||| ||||||    
T  12403 ttgaaattgaaattgattagtgacatcactagcactgcttcacgccggggatgacactttt-gaaattgaaattgaaatt-gattagtgacatcactagc 12306  T
Q  115 acggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| ||||||    
T  12305 acggcttcacgccggggatggcacttt 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 12266 - 12142
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagct--accgtggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagc 114  Q
    |||||||||||||||| | |||||| |||| |||| |||  ||   ||||||||||||||| ||||||||||||||| || || |||||  || ||||||    
T  12266 ttgaaattgaaattgattagtgacatcactagcacggctttacgccggggatgacactttt-gaaattgaaattgaaatt-gattagtgatatcactagc 12169  T
Q  115 acggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||| ||||||    
T  12168 acggcttcacgccggggatggcacttt 12142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 12559 - 12481
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||  ||||||||||||||| || || ||||| | | |||||||||||||||||||||||||||||||||    
T  12559 ggggatgacactttg-gaaattgaaattgaaatt-gaatagtgacctcactagcacggcttcacgccggggatgacacttt 12481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 12269 - 12207
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||| || || ||||| ||| ||||||||||||| |||||||||||||||||||    
T  12269 aaattgaaattgaaatt-gattagtgacatcactagcacggctttacgccggggatgacacttt 12207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 12406 - 12344
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||| || || ||||| ||| |||||||| ||||||||||||||||||||||||    
T  12406 aaattgaaattgaaatt-gattagtgacatcactagcactgcttcacgccggggatgacacttt 12344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 12070 - 12011
Alignment:
Q  81 ttgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||| || || ||||| ||||||||||||||||| ||| |||||||||||||||    
T  12070 ttgaaattgaaatt-gattagtgacatgactagcacggctttacgtcggggatgacacttt 12011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 12593 - 12545
Alignment:
Q  94 ttgactagtgtcatgactagcacggcttcacgccggggatgacactttg 142  Q
    |||| ||||| ||| || |||||||||||||||||||||||||||||||    
T  12593 ttgattagtgacatcacgagcacggcttcacgccggggatgacactttg 12545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 12494 - 12416
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| |||||||||||||||  |||| ||||| ||| ||||||| |||||||| ||| || || ||||||    
T  12494 ggggatgacactttt-gaaattgaaattgaa-attgattagtgacatcactagcatggcttcacaccgagggtggcacttt 12416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 58095 - 57965
Alignment:
Q  75 ttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacactttgacaataagaaggtaaatggaagaggcttattt 174  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||||||||||||   || |||||||||||||||||  |||||||    
T  58095 ttgaaattgaaatggaaatt-gactagtgtcatgactagcacggctttacgccggggatgacactttgctgattagaaggtaaatggaagactcttattt 57997  T
Q  175 gtagaaacttgcggcttgacacaatggtaagt 206  Q
    ||||||||||||||||||||||||||||||||    
T  57996 gtagaaacttgcggcttgacacaatggtaagt 57965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 58183 - 58101
Alignment:
Q  61 ggggatgacactttttgaaattgaaattgaagtt---tgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    ||||||||||||||| ||||||||||||||| ||   |||||||||||||||||||||| ||||||||||||||||||||||||    
T  58183 ggggatgacactttt-gaaattgaaattgaaattgattgactagtgtcatgactagcacagcttcacgccggggatgacacttt 58101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 58232 - 58170
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||| || || ||||| |||||||||||||||||||||| ||||||||||||||    
T  58232 aaattgaaattgaaatt-gattagtgacatgactagcacggcttcacgcaggggatgacacttt 58170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 4924 - 4840
Alignment:
Q  123 acgccggggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||| ||||||||||||||||  |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  4924 acgctggggatgacactttgatgataagaaggtaaatggaagatgttcatttgtagaaacttgcggcttgacacaatggtaagtt 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 189293 - 189371
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaatggtaagtt 207  Q
    |||||||||||||||  |||||||||||||||||||| | | |||||||||||||| | ||||||||||||||||||||    
T  189293 gggatgacactttgatgataagaaggtaaatggaagatgttcatttgtagaaacttactgcttgacacaatggtaagtt 189371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2005 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold2005
Description:

Target: scaffold2005; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 270 - 140
Alignment:
Q  74 tttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttca-cgccggggatgacactttgacaataagaaggt-aaatggaagaggctta 171  Q
    |||||||||||||||||  || || ||||| ||| |||||||||||||   ||||||||||||||||||   |||  |||| | |||||||||| ||| |    
T  270 tttgaaattgaaattgacatt-gattagtgacataactagcacggctttttcgccggggatgacacttttg-aatttgaagttgaaatggaagacgctca 173  T
Q  172 tttgtagaaacttgcggcttgacacaatggtaa 204  Q
    |||||||||||||||||||||||||||||||||    
T  172 tttgtagaaacttgcggcttgacacaatggtaa 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 3242 - 3180
Alignment:
Q  78 aaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||| || ||  |||| |||||||||||||||||||||||||||||||||||||    
T  3242 aaattgaaattgaaatt-gatcagtgacatgactagcacggcttcacgccggggatgacacttt 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1767 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1767
Description:

Target: scaffold1767; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 1211 - 1141
Alignment:
Q  129 gggatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaat 199  Q
    |||||||||||||||  |||||||||||||| ||||| | | ||||||||||| |||||||| ||||||||    
T  1211 gggatgacactttgatgataagaaggtaaatagaagatgttcatttgtagaaaattgcggctcgacacaat 1141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 20778 - 20852
Alignment:
Q  16 tttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    ||||||||||||||||| | |||||| || | |||||||||||| |||||||||||| ||||| ||||||||||||    
T  20778 tttgaaattgaaattgattagtgacatcagtggcacagctaccgctggggatgacac-ttttggaattgaaattga 20852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 16528 - 16602
Alignment:
Q  16 tttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    ||||||||||||||||| | |||||| || | |||||||||||| | |||||||||| ||||| ||||||||||||    
T  16528 tttgaaattgaaattgatttgtgacatcagtggcacagctaccgctagggatgacac-ttttggaattgaaattga 16602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 19862 - 19936
Alignment:
Q  16 tttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    ||||||||||||||||| | |||||| || | |||||||||||| | |||||||||| ||||| ||||||||||||    
T  19862 tttgaaattgaaattgatttgtgacatcagtggcacagctaccgctagggatgacac-ttttggaattgaaattga 19936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 171 - 98
Alignment:
Q  67 gacactttttgaaattgaaattgaagtttgactagtgtcatgactagcacggcttcacgccggggatgacacttt 141  Q
    |||||||||||||||||||||||||  |||| ||||| |||| |||||||| ||| | |||||| ||||||||||    
T  171 gacactttttgaaattgaaattgaa-attgattagtgacatggctagcacgactttatgccgggtatgacacttt 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 180159 - 180232
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    |||||||||||||||||| |||||| || | ||||||||  || |||||||||||| ||||||||||||||||||    
T  180159 ttgaaattgaaattgactagtgacatcaatggcacagctttcgctggggatgacac-ttttgaaattgaaattga 180232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 180905 - 180994
Alignment:
Q  1 ctggggataacaccttttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattgaa 91  Q
    |||||||| |||| |||||||||| ||||||||| ||| || || ||||||||||   | |||||||||||| |||||||||||||||||||    
T  180905 ctggggatgacac-ttttgaaattaaaattgactagtggcatcagttgcacagcttttgctggggatgacac-ttttgaaattgaaattgaa 180994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 28992 - 28924
Alignment:
Q  131 gatgacactttgacaataagaaggtaaatggaagaggcttatttgtagaaacttgcggcttgacacaat 199  Q
    |||||||||||||  |||||||||||||| ||||| | | |||||||||||||||| | | ||||||||    
T  28992 gatgacactttgatgataagaaggtaaatagaagatgttcatttgtagaaacttgccgttcgacacaat 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 14759 - 14686
Alignment:
Q  17 ttgaaattgaaattgactggtgacaccacttgcacagctaccg-tggggatgacactttttgaaattgaaattga 90  Q
    |||||||||||||||||| |||||| || | ||||||||   | |||||||||||| ||||||||||||||||||    
T  14759 ttgaaattgaaattgactagtgacatcagtggcacagcttttgctggggatgacac-ttttgaaattgaaattga 14686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University