View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1147_low_33 (Length: 251)
Name: NF1147_low_33
Description: NF1147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1147_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 45682486 - 45682317
Alignment:
| Q |
1 |
atctgaaataaagttaaaggtttgcgaaaagcagagtggtagtattacttcattttggtggaaggaagagctcttcaaagtacaaacaccaaatgtatgc |
100 |
Q |
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| T |
45682486 |
atctgaaataaagttaaaggtttgcgaaaagcagagtggtagtattacttcattttggtggaaggaagagctcttcaaagtacaaacaccaaatgtatgc |
45682387 |
T |
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| Q |
101 |
aaagctagttccaagtcacactgtcaactgggaaaaacataaaagttcacattgtaagtccttgagcttc |
170 |
Q |
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| T |
45682386 |
aaagctagttccaagtcacactgtcaactgggaaaaacataaaagttcacattgtaagtccttgagcttc |
45682317 |
T |
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