View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11480_low_12 (Length: 479)

Name: NF11480_low_12
Description: NF11480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11480_low_12
NF11480_low_12
[»] chr1 (35 HSPs)
chr1 (317-456)||(23953559-23953698)
chr1 (124-326)||(38595742-38595945)
chr1 (130-316)||(28725905-28726092)
chr1 (1-129)||(23953690-23953819)
chr1 (129-314)||(30664169-30664354)
chr1 (129-318)||(52702144-52702333)
chr1 (153-317)||(10679534-10679702)
chr1 (130-264)||(27457002-27457137)
chr1 (120-326)||(5694311-5694517)
chr1 (128-309)||(24178470-24178651)
chr1 (130-319)||(29657771-29657960)
chr1 (130-319)||(51065745-51065934)
chr1 (153-237)||(37350139-37350222)
chr1 (153-320)||(15227763-15227929)
chr1 (128-258)||(17333340-17333469)
chr1 (171-258)||(33644393-33644480)
chr1 (130-319)||(18043162-18043351)
chr1 (229-316)||(23822523-23822608)
chr1 (130-318)||(14350277-14350463)
chr1 (127-315)||(38162847-38163035)
chr1 (130-318)||(47009993-47010181)
chr1 (130-228)||(29210413-29210510)
chr1 (130-237)||(29683195-29683302)
chr1 (274-314)||(52431725-52431765)
chr1 (274-317)||(29210538-29210581)
chr1 (130-237)||(48071483-48071588)
chr1 (155-309)||(3784720-3784873)
chr1 (132-222)||(9413973-9414062)
chr1 (128-237)||(38335168-38335275)
chr1 (274-319)||(42769987-42770032)
chr1 (274-310)||(12072068-12072104)
chr1 (274-318)||(38701935-38701979)
chr1 (153-229)||(39912367-39912441)
chr1 (192-316)||(41730370-41730494)
chr1 (274-322)||(45449238-45449286)
[»] chr8 (39 HSPs)
chr8 (127-318)||(40267918-40268110)
chr8 (131-320)||(43714184-43714373)
chr8 (127-318)||(18955690-18955884)
chr8 (128-316)||(29566698-29566887)
chr8 (121-322)||(42655271-42655472)
chr8 (127-302)||(39751485-39751661)
chr8 (154-266)||(24261390-24261502)
chr8 (161-307)||(39206217-39206363)
chr8 (175-321)||(2490152-2490297)
chr8 (156-251)||(37479594-37479689)
chr8 (168-321)||(2270564-2270716)
chr8 (133-321)||(13643015-13643202)
chr8 (133-321)||(13743440-13743627)
chr8 (130-254)||(4811557-4811682)
chr8 (131-316)||(16888544-16888728)
chr8 (128-316)||(34228680-34228868)
chr8 (130-317)||(27988499-27988685)
chr8 (130-317)||(28045801-28045987)
chr8 (130-319)||(4537741-4537930)
chr8 (130-317)||(168466-168653)
chr8 (119-326)||(30675563-30675769)
chr8 (119-326)||(32113897-32114105)
chr8 (130-184)||(2490320-2490375)
chr8 (135-218)||(33899108-33899190)
chr8 (128-222)||(37373204-37373296)
chr8 (125-309)||(2805267-2805451)
chr8 (159-258)||(22199239-22199338)
chr8 (155-229)||(37713989-37714063)
chr8 (124-316)||(16394061-16394253)
chr8 (131-228)||(21595848-21595943)
chr8 (130-237)||(11112639-11112745)
chr8 (130-237)||(33357209-33357315)
chr8 (130-179)||(5725596-5725646)
chr8 (274-320)||(9253899-9253944)
chr8 (132-237)||(20831633-20831737)
chr8 (159-229)||(33124580-33124650)
chr8 (120-317)||(9063051-9063247)
chr8 (127-207)||(12652627-12652707)
chr8 (279-319)||(40737217-40737257)
[»] chr6 (31 HSPs)
chr6 (130-317)||(34706720-34706908)
chr6 (129-314)||(34712127-34712313)
chr6 (153-308)||(1127839-1127994)
chr6 (151-264)||(31379418-31379531)
chr6 (130-319)||(32929505-32929694)
chr6 (125-326)||(12145107-12145308)
chr6 (130-319)||(23402138-23402327)
chr6 (125-310)||(32985199-32985384)
chr6 (127-319)||(392093-392285)
chr6 (130-321)||(3515766-3515957)
chr6 (125-324)||(4215690-4215889)
chr6 (128-237)||(21878427-21878535)
chr6 (130-263)||(29451168-29451300)
chr6 (197-254)||(22021731-22021788)
chr6 (130-237)||(7851239-7851345)
chr6 (127-317)||(2580949-2581139)
chr6 (130-316)||(18276612-18276800)
chr6 (130-222)||(20897948-20898039)
chr6 (153-230)||(22021655-22021732)
chr6 (155-223)||(3246180-3246247)
chr6 (129-189)||(29978232-29978291)
chr6 (126-228)||(13417051-13417152)
chr6 (120-237)||(28225211-28225326)
chr6 (160-218)||(252418-252476)
chr6 (127-264)||(23629628-23629764)
chr6 (130-222)||(27433492-27433583)
chr6 (125-237)||(34396607-34396718)
chr6 (145-222)||(34477645-34477720)
chr6 (122-237)||(2350644-2350758)
chr6 (280-320)||(24663197-24663237)
chr6 (279-311)||(32929657-32929689)
[»] chr5 (30 HSPs)
chr5 (153-316)||(31467743-31467906)
chr5 (117-320)||(14214046-14214249)
chr5 (157-314)||(30889432-30889589)
chr5 (132-319)||(1383270-1383457)
chr5 (130-264)||(21944912-21945047)
chr5 (130-266)||(16972176-16972313)
chr5 (122-265)||(32188042-32188184)
chr5 (127-265)||(39234828-39234966)
chr5 (129-266)||(40608586-40608723)
chr5 (162-254)||(14349592-14349684)
chr5 (129-317)||(34650832-34651019)
chr5 (129-322)||(11957961-11958154)
chr5 (126-326)||(6283558-6283758)
chr5 (130-318)||(35132522-35132709)
chr5 (153-229)||(6042135-6042210)
chr5 (127-222)||(10069966-10070060)
chr5 (129-237)||(21547474-21547580)
chr5 (130-228)||(10054441-10054538)
chr5 (130-237)||(31909632-31909737)
chr5 (130-222)||(13661808-13661899)
chr5 (159-231)||(5302365-5302437)
chr5 (129-228)||(35504329-35504427)
chr5 (130-237)||(4837258-4837363)
chr5 (279-318)||(8927554-8927593)
chr5 (127-237)||(9721687-9721796)
chr5 (274-332)||(40564387-40564446)
chr5 (274-324)||(8787483-8787533)
chr5 (156-229)||(6284822-6284893)
chr5 (181-229)||(1069610-1069658)
chr5 (274-318)||(10070093-10070137)
[»] chr7 (30 HSPs)
chr7 (126-318)||(38128287-38128480)
chr7 (130-316)||(6097336-6097523)
chr7 (132-319)||(19434495-19434682)
chr7 (130-317)||(34556891-34557076)
chr7 (127-266)||(13106364-13106504)
chr7 (130-317)||(20402389-20402578)
chr7 (153-266)||(32805562-32805675)
chr7 (133-318)||(30923986-30924174)
chr7 (121-245)||(45842844-45842968)
chr7 (130-316)||(24798403-24798588)
chr7 (130-319)||(34333284-34333472)
chr7 (130-317)||(34606261-34606448)
chr7 (130-316)||(4628566-4628752)
chr7 (130-228)||(18485961-18486058)
chr7 (127-237)||(43594116-43594225)
chr7 (153-319)||(30810679-30810844)
chr7 (192-229)||(4088488-4088525)
chr7 (129-316)||(24438476-24438663)
chr7 (161-229)||(38022579-38022647)
chr7 (130-228)||(5239285-5239382)
chr7 (124-323)||(13064869-13065067)
chr7 (130-237)||(27456193-27456298)
chr7 (130-228)||(37631631-37631728)
chr7 (124-237)||(8754665-8754777)
chr7 (131-189)||(28587911-28587968)
chr7 (157-223)||(34435747-34435813)
chr7 (130-227)||(34546404-34546500)
chr7 (131-228)||(47656981-47657077)
chr7 (133-237)||(11686404-11686507)
chr7 (174-223)||(41468725-41468774)
[»] chr4 (36 HSPs)
chr4 (133-315)||(16572488-16572671)
chr4 (130-317)||(11893400-11893588)
chr4 (132-266)||(22225795-22225930)
chr4 (153-317)||(28119905-28120069)
chr4 (133-264)||(34151124-34151255)
chr4 (130-261)||(55594131-55594262)
chr4 (130-326)||(10109991-10110188)
chr4 (130-320)||(292114-292305)
chr4 (130-317)||(37402758-37402939)
chr4 (169-264)||(6493751-6493846)
chr4 (128-318)||(8749794-8749987)
chr4 (204-266)||(47092657-47092719)
chr4 (127-318)||(32217042-32217232)
chr4 (218-307)||(28120058-28120147)
chr4 (129-316)||(54897307-54897494)
chr4 (120-322)||(29591179-29591381)
chr4 (130-316)||(43944507-43944692)
chr4 (120-263)||(32202533-32202676)
chr4 (129-229)||(9964720-9964820)
chr4 (129-222)||(28755620-28755711)
chr4 (244-317)||(16820966-16821039)
chr4 (153-237)||(42898826-42898908)
chr4 (274-321)||(4089286-4089333)
chr4 (274-321)||(16536192-16536239)
chr4 (146-229)||(20654691-20654774)
chr4 (180-219)||(24142268-24142307)
chr4 (130-228)||(43202472-43202569)
chr4 (274-321)||(54054673-54054720)
chr4 (131-237)||(19503185-19503289)
chr4 (130-228)||(24679731-24679827)
chr4 (130-222)||(18067974-18068065)
chr4 (130-237)||(55882684-55882789)
chr4 (127-222)||(3783596-3783690)
chr4 (155-251)||(3999451-3999546)
chr4 (274-322)||(36395243-36395291)
chr4 (153-237)||(54655956-54656038)
[»] chr2 (35 HSPs)
chr2 (132-321)||(26269987-26270175)
chr2 (127-316)||(31782565-31782755)
chr2 (130-265)||(5282304-5282440)
chr2 (129-264)||(15135772-15135907)
chr2 (130-316)||(45261903-45262096)
chr2 (131-264)||(29771417-29771550)
chr2 (153-266)||(44854390-44854502)
chr2 (127-265)||(28012005-28012143)
chr2 (153-292)||(28178425-28178564)
chr2 (118-209)||(44854298-44854388)
chr2 (129-321)||(20552930-20553122)
chr2 (129-321)||(31438645-31438837)
chr2 (116-319)||(3668110-3668312)
chr2 (130-316)||(30486210-30486396)
chr2 (130-237)||(26891743-26891849)
chr2 (125-324)||(27856388-27856587)
chr2 (133-222)||(30834456-30834545)
chr2 (197-254)||(44331839-44331896)
chr2 (130-237)||(561598-561704)
chr2 (129-316)||(44587901-44588088)
chr2 (159-251)||(3336412-3336505)
chr2 (132-222)||(16807318-16807409)
chr2 (132-222)||(16846599-16846690)
chr2 (130-316)||(22887750-22887936)
chr2 (128-325)||(5093531-5093726)
chr2 (153-230)||(44331763-44331840)
chr2 (156-319)||(22567629-22567791)
chr2 (130-316)||(32360869-32361055)
chr2 (128-266)||(43637163-43637300)
chr2 (130-266)||(20252740-20252877)
chr2 (275-316)||(29771568-29771609)
chr2 (153-225)||(5358584-5358656)
chr2 (153-237)||(32860126-32860208)
chr2 (129-237)||(38296177-38296283)
chr2 (275-323)||(39531967-39532015)
[»] scaffold0001 (1 HSPs)
scaffold0001 (132-318)||(508985-509173)
[»] chr3 (30 HSPs)
chr3 (161-322)||(51665709-51665870)
chr3 (158-254)||(53163792-53163888)
chr3 (119-326)||(39074408-39074614)
chr3 (129-316)||(10617284-10617470)
chr3 (130-322)||(49893331-49893523)
chr3 (130-316)||(272220-272406)
chr3 (126-229)||(26966492-26966595)
chr3 (127-253)||(27643998-27644124)
chr3 (121-326)||(43786862-43787067)
chr3 (181-254)||(31436313-31436386)
chr3 (128-319)||(4168181-4168372)
chr3 (194-254)||(12011681-12011741)
chr3 (127-318)||(48725268-48725459)
chr3 (130-319)||(18014672-18014861)
chr3 (130-310)||(41304005-41304183)
chr3 (130-318)||(52520681-52520869)
chr3 (153-229)||(17752708-17752784)
chr3 (153-229)||(19054028-19054104)
chr3 (162-222)||(25743842-25743902)
chr3 (130-241)||(34300689-34300800)
chr3 (162-222)||(40614462-40614522)
chr3 (129-229)||(27994387-27994487)
chr3 (130-309)||(858589-858768)
chr3 (133-229)||(13898979-13899075)
chr3 (274-317)||(11308210-11308253)
chr3 (130-316)||(46352634-46352820)
chr3 (129-237)||(52246581-52246688)
chr3 (129-228)||(20923991-20924089)
chr3 (133-237)||(41554020-41554122)
chr3 (127-178)||(51819012-51819064)
[»] scaffold0264 (1 HSPs)
scaffold0264 (130-317)||(22961-23148)
[»] scaffold0206 (1 HSPs)
scaffold0206 (130-237)||(11050-11154)
[»] scaffold0038 (1 HSPs)
scaffold0038 (120-237)||(25709-25824)
[»] scaffold0674 (1 HSPs)
scaffold0674 (145-222)||(7992-8067)
[»] scaffold0549 (1 HSPs)
scaffold0549 (145-222)||(7304-7379)
[»] scaffold0045 (2 HSPs)
scaffold0045 (156-237)||(53426-53505)
scaffold0045 (126-189)||(50544-50607)
[»] scaffold0019 (1 HSPs)
scaffold0019 (132-229)||(66401-66498)
[»] scaffold0003 (1 HSPs)
scaffold0003 (130-222)||(53780-53871)
[»] scaffold0188 (1 HSPs)
scaffold0188 (279-311)||(6259-6291)


Alignment Details
Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 317 - 456
Target Start/End: Complemental strand, 23953698 - 23953559
Alignment:
Q  317 ttattatattgtaatgaaatttcaaggaaacatgttttggaggtaaagattacttacaaaattagttatgtttattgtagtttatttctccttttgtaat 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23953698 ttattatattgtaatgaaatttcaaggaaacatgttttggaggtgaagattacttagaaaattagttatgtttattgtagtttatttctccttttgtaat 23953599  T
Q  417 cgtgtttcaatgtcatctggaatatcaactaaatcacacc 456  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23953598 cgtgtttcaatgtcatctggaatatcaactaaatcacacc 23953559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 124 - 326
Target Start/End: Complemental strand, 38595945 - 38595742
Alignment:
Q  124 ttatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38595945 ttatatgggaaatgctaaccggtgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 38595846  T
Q  223 ctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    | |||||||||||||||||||||||||||||| ||| ||||| |       | ||||||||||| |||||| | |||||||||||||||||||| | |||    
T  38595845 ccataaataagtcaacaaaacttccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagcatgacccatttta 38595746  T
Q  323 tatt 326  Q
    ||||    
T  38595745 tatt 38595742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 28726092 - 28725905
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28726092 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 28725993  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |||||||||||||||||||||||||| ||| |||||||       ||||||||||||| |||||| ||| |||||||||||| |||||    
T  28725992 ataagtcaacaaaacttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagaccc 28725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23953819 - 23953690
Alignment:
Q  1 agtaatatggtaaagtcaagtcaattaaagattcgttttgtgtaaggaggaagcaaaattaatgtatttaattgatgagtag-aatattcaaactcatgt 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23953819 agtaatatggtaaagtcaagtcaattgaagattcgttttgtgtaaggaggaagcaaaattaatgtatttaattgatgagtagaaatattcaaactcatgt 23953720  T
Q  100 aagatgttgagagagccaatattattatat 129  Q
    ||||||||||||||||||||||||||||||    
T  23953719 aagatgttgagagagccaatattattatat 23953690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 314
Target Start/End: Complemental strand, 30664354 - 30664169
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  30664354 tgggaaatgctaaccg-tgcctccggggcattggttaaggataataaaaaagaaaattatatgttaattattgcattgaaaattgtttaattaatctata 30664256  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgac 314  Q
    ||||||||||||||||||||||||||| ||| ||||||        ||||||||||||| ||||||  |||||||||||||||||||    
T  30664255 aataagtcaacaaaacttccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagcatgac 30664169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 129 - 318
Target Start/End: Complemental strand, 52702333 - 52702144
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52702333 tgggaaatgctaaccggtgctcccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccata 52702234  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||||||||| |||||||| ||||||| ||| |||||||       ||||||||||||| |||| | || |||||| || |||||||||||    
T  52702233 aataagtcaaaaaaacttcattttatggtaataatttcctttttttgtatgcttaaccaatgcctc-ggagcaccgatttgcatgaccctt 52702144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 153 - 317
Target Start/End: Original strand, 10679534 - 10679702
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta-----taaataagtcaacaaaacttcc 247  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  10679534 gggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaattaaataagtcaacaaaacttcc 10679632  T
Q  248 ttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||||| ||||||||||        |||||||||||   || ||| |||||||||||||||||||||||    
T  10679633 ttttatggtaaaaatttcttttttttgtatgcttaacaggtgtcccgggggcaccggttagcatgaccct 10679702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 130 - 264
Target Start/End: Complemental strand, 27457137 - 27457002
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||| || |||| ||||| ||  |||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27457137 gggaaatgctaatcggtgcccccggggcaagggttaaagataataaaaagtgaaattatatgttaattagtgcattgaaaattgtttaattaatccataa 27457038  T
Q  229 ataagtcaacaaaacttccttttatgataaaaattt 264  Q
    |||||||||||||||||||||||||| |||||||||    
T  27457037 ataagtcaacaaaacttccttttatggtaaaaattt 27457002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 120 - 326
Target Start/End: Original strand, 5694311 - 5694517
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||  || ||| ||||||| ||||||| ||||    
T  5694311 attattttatgggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaaagggaaattatatagtagttaatgcattg-aaattgtgtaat 5694408  T
Q  219 taatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||  ||||  ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| ||| || |||||||||||||||| ||||||    
T  5694409 taattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcaggaccct 5694508  T
Q  318 tattatatt 326  Q
    |||| ||||    
T  5694509 tattttatt 5694517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 128 - 309
Target Start/End: Complemental strand, 24178651 - 24178470
Alignment:
Q  128 atgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    |||||||||||||||||||||| || ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||||||    
T  24178651 atgggaaatgctaaccgatgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatctat 24178554  T
Q  227 aaataagtcaaca-aaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagc 309  Q
    ||  ||||||| |  |  ||||||||||| ||| ||||||        ||||||||||||| |||||| |||||||||||||||    
T  24178553 aataaagtcaaaagcagtttccttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagc 24178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 29657771 - 29657960
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||||||| |||||||||||  || ||| ||||||| ||||||| ||||||||  ||||    
T  29657771 gggaaatgctaaccggtgcccccggggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaattgataa 29657868  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      ||||||| || |  |||||||| || ||| |||| ||       ||||||||||||| |||||  |||||||||||||||| ||||||||    
T  29657869 taaagtcaaaaacagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctta 29657960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 51065934 - 51065745
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| || | ||||| |||||||||||||||  ||||||  |||||||||  || ||| || ||||||| |||| |||||||| |||||    
T  51065934 gggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagt-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 51065837  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      ||||||| || | || ||||||||| ||| |||| ||       ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  51065836 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccctta 51065745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 37350139 - 37350222
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaa 237  Q
    |||||||| ||||||||| ||||||   |||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  37350139 gggcactgattaaggatattaaaaaat-aaattatatggtaattgttgcattgaaaattgtgtaattaatccataaataagtcaa 37350222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 153 - 320
Target Start/End: Original strand, 15227763 - 15227929
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaactt-cctttt 251  Q
    ||||||||||||||||||  ||||||| |||||||||  |||||| |||||||||| |||| ||||||||  ||||  ||||||| || | || ||||||    
T  15227763 gggcactggttaaggatatgaaaaagg-aaattatatagtaattaatgcattgaaa-ttgtgtaattaattgataataaagtcaaaaacagtttcctttt 15227860  T
Q  252 atgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    ||| ||| |||| ||       ||||||||||||| |||||| | |||||||||||||| |||||||||    
T  15227861 atggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaagacccttat 15227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 258
Target Start/End: Complemental strand, 17333469 - 17333340
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||||| |||| ||||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||  |||    
T  17333469 atgggaaatgctaaccggtgcccccgggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattcata 17333372  T
Q  228 aataagtcaacaa-aacttccttttatgataa 258  Q
    |  ||||||| || |  |||||||||||||||    
T  17333371 ataaagtcaaaaacagtttccttttatgataa 17333340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 33644480 - 33644393
Alignment:
Q  171 ataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataa 258  Q
    ||||||| | |||||||||  |||||||||||||||||||||| ||||||||  ||||||| |||| ||||  |||||||||||||||    
T  33644480 ataaaaaagaaaattatataataattattgcattgaaaattgtgtaattaattcataaatatgtcatcaaagtttccttttatgataa 33644393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 18043162 - 18043351
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  18043162 gggaaatgctaaccggtgcctccggggcactggttaagggt-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 18043259  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      | ||||| || |  || |||||||| ||| ||||          ||||||||||||| |||||| |||||||||||||||| ||||||||    
T  18043260 taatgtcaaaaacagttttcttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 18043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 316
Target Start/End: Complemental strand, 23822608 - 23822523
Alignment:
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |||||||||||||||||||||||||| ||| |||||         ||||||||||||| |||||| ||||||||||||||||||||||    
T  23822608 ataagtcaacaaaacttccttttatggtaagaattt--tttttttgtatgcttaaccaatgccccgggggcaccggttagcatgaccc 23822523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 318
Target Start/End: Complemental strand, 14350463 - 14350277
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| |||| |||| |||||||| ||  ||||||| |||||||||  || ||| |||||| |||||||| |||||||| |||||    
T  14350463 gggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaagg-aaattatattgtagttaatgcatt-aaaattgtgtaattaatttataa 14350366  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
      | ||||| || || ||||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| |||||||    
T  14350365 taatgtcaaaaacaatttccttttatggtaataatt-cccttaatggtatgcttaaccagtgcccc-ggggcaccggttagcaggaccctt 14350277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 315
Target Start/End: Original strand, 38162847 - 38163035
Alignment:
Q  127 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| | || |||| | |||||||||  || ||| ||||||| ||||||| |||||||| ||    
T  38162847 tatgggaaatgttaaccggtgcctccggggcactggttaagggt-atgaaaaagaaaattatatagtagttaatgcattg-aaattgtgtaattaattta 38162944  T
Q  226 taaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacc 315  Q
    |||  | ||||| || |  ||||||||||| ||| |||| ||       ||||||||||||  |||||| |||||||||||||||| ||||    
T  38162945 taataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggacc 38163035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 47009993 - 47010181
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||| || ||| ||||| ||||||||||||||||  ||||||| |||||||||  || ||| || ||||||| |||| |||||||| |||||    
T  47009993 gggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataa 47010090  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
      || |||| || | || ||||||||| ||| ||||  |       ||||||||||||| ||| ||||||||||||||||||| |||||||    
T  47010091 taaattcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcaggaccctt 47010181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 29210413 - 29210510
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  29210413 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 29210510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 29683195 - 29683302
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||| ||||  ||||| |||||||||||  || ||| ||||||| |||| || |||||||| |||||    
T  29683195 gggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagttaatgcattg-aaatcgtataattaatttataa 29683293  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  29683294 taaagtcaa 29683302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 52431725 - 52431765
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgac 314  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  52431725 gtatgcttaaccagtgccccagggacaccggttagcatgac 52431765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 29210538 - 29210581
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||    
T  29210538 gtatgcttaaccagtgccccgggggcaccggttagcaggaccct 29210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 48071483 - 48071588
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||||||||||||  | ||| ||||||||||||| ||  ||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||     
T  48071483 gggaaatgctaaccgatgctccggggtactggttaaggat-atgtaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttataat 48071580  T
Q  230 taagtcaa 237  Q
     |||||||    
T  48071581 aaagtcaa 48071588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 309
Target Start/End: Complemental strand, 3784873 - 3784720
Alignment:
Q  155 gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttat 253  Q
    ||||||||||||||||  ||||||| |||||||||  || ||| |||||||||| |||| ||||||||  ||||  ||||||| || || || |||||||    
T  3784873 gcactggttaaggatatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtgtaattaattgataataaagtcaaaaacaattttcttttat 3784776  T
Q  254 gataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagc 309  Q
    | ||| |||||||       ||||||||||||  || ||| |||||||||||||||    
T  3784775 ggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagc 3784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 9414062 - 9413973
Alignment:
Q  132 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||| |||| | ||||| ||||||| |||| |||||| | ||||||||   ||||||||| |||||||| ||| ||||||||    
T  9414062 gaaatgctaaccggtgccccggggcattggttaaagatattaaaaa-gaaaattatacagtaattattgaattgaaaactgtgtaattaat 9413973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 38335168 - 38335275
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||||| || ||  || |||||||||| ||| || |||| |||||||||||  |||||| |||||||  |||||| |||||||| ||||    
T  38335168 atgggaaatgctaaccggtgtcttgggacactggttaaagat-atgaaaaaggaaattatatagtaattaatgcattg-taattgtgtaattaatttata 38335265  T
Q  228 aataagtcaa 237  Q
    |  |||||||    
T  38335266 ataaagtcaa 38335275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 42770032 - 42769987
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    ||||||||||||| |||||| ||||||||||||||||  |||||||    
T  42770032 gtatgcttaaccagtgccccgggggcaccggttagcagaaccctta 42769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 12072104 - 12072068
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagca 310  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  12072104 gtatgcttaaccagtgccccgggggcaccggttagca 12072068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 38701979 - 38701935
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||||    
T  38701979 gtatgcttaaccagtgccccgagggcaccggttagcaggaccctt 38701935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 39912441 - 39912367
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||| ||||||||| ||||||||||||||||||  || ||| ||||||| ||||||| | |||||| ||||||    
T  39912441 gggcactgattaaggata-taaaaagggaaattatatactagttaatgcattg-aaattgtgtgattaatttataaa 39912367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 41730370 - 41730494
Alignment:
Q  192 taattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgc 290  Q
    |||||| |||||||||| ||||||||||||| |||||  ||||||| || |  ||||||||||||||| |||| ||       ||||||||||| | |||    
T  41730370 taattaatgcattgaaa-ttgtttaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaacaagtgc 41730468  T
Q  291 cccaggggcaccggttagcatgaccc 316  Q
    |||||  |||| |||||||| |||||    
T  41730469 cccagaagcactggttagcaggaccc 41730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 45449286 - 45449238
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    ||||| ||||||| ||||||||||||| ||||||||| |||||| ||||    
T  45449286 gtatgtttaaccagtgccccaggggcatcggttagcaggaccctaatta 45449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 40267918 - 40268110
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40267918 tatgggaaatgctaaccaatgtccccggagcactggttaaggataataaaaagggaaattataggttaattattgcattgaaaattgtttaattaatcta 40268017  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||||||||||||||||||||||| |||||||       ||||| ||||||  ||||||||| ||||| |||| ||||||||||    
T  40268018 taaataagtcaacaaaacttccttttatgataataatttcctttttttgtatgtttaacccgtgccccaggagcaccagttaacatgaccctt 40268110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 131 - 320
Target Start/End: Complemental strand, 43714373 - 43714184
Alignment:
Q  131 ggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||| |||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43714373 ggaaacgctaaccggtgcccccggggcactggtta-ggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 43714275  T
Q  230 taagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  43714274 taagtcaacaaaacttccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgacccttat 43714184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 18955690 - 18955884
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18955690 tatgggaaatgctaaccgatgcccccgtggcactggttaatgataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcca 18955789  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaa--tttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||||||||||||||||||| ||| ||  |||         ||||||||||||  |||||| ||||||||||||||||||||||||    
T  18955790 taaataagtcaacaaaacttccttttatggtaagaattttttttttttttgtatgcttaacccatgccccgggggcaccggttagcatgaccctt 18955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 316
Target Start/End: Original strand, 29566698 - 29566887
Alignment:
Q  128 atgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  29566698 atgggaaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccat 29566797  T
Q  227 aaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |||||| ||||||||||||| ||||||||||| |||||||       ||||||||||||| ||||||  | |||||| ||||||||||||    
T  29566798 aaataaatcaacaaaacttctttttatgataagaatttcctttttttgtatgcttaaccactgccccgagagcaccgattagcatgaccc 29566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 121 - 322
Target Start/End: Complemental strand, 42655472 - 42655271
Alignment:
Q  121 ttattatatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatt 219  Q
    |||||| | ||||||||||||  | ||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  42655472 ttattaaaagggaaatgctaagtggtgcctccggagcacttgttaaggataatgaaaaggtaaattatatgttaattattgcattgaaaattgtttaatt 42655373  T
Q  220 aatctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    |||| |||||||||||||||||||||| |||||| |||| |||||||       ||||||||||||  || ||| |||||||||||||||||||||||||    
T  42655372 aatccataaataagtcaacaaaacttcattttataataagaatttcctttttttgtatgcttaaccggtg-ccctggggcaccggttagcatgaccctta 42655274  T
Q  320 tta 322  Q
    |||    
T  42655273 tta 42655271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 39751661 - 39751485
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||    
T  39751661 tatgggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatatattatttattgcattaaaaattgtttaattaatcta 39751562  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcacc 302  Q
    ||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||| |||| | ||||||||    
T  39751561 taaataagtcaacaaaacttccttttatggtaagaatttcctttttttgtatgcttaaccagtgcctcgggggcacc 39751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 24261390 - 24261502
Alignment:
Q  154 ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttat 253  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  24261390 ggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaacccataaataagtcaacaaaacttccttttat 24261489  T
Q  254 gataaaaatttcc 266  Q
    ||||| |||||||    
T  24261490 gataagaatttcc 24261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 161 - 307
Target Start/End: Original strand, 39206217 - 39206363
Alignment:
Q  161 gttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaa 260  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  39206217 gttaaggataataaaaagggaaattatatgttaattattgtattgaaaattatttaattaattcataaataagtcaacaaaactttcttttatgataaaa 39206316  T
Q  261 atttccnnnnnnngtatgcttaaccattgccccaggggcaccggtta 307  Q
    ||||||       ||||||||||||  |||||| |||||||||||||    
T  39206317 atttcctttttttgtatgcttaaccggtgcccccggggcaccggtta 39206363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 175 - 321
Target Start/End: Complemental strand, 2490297 - 2490152
Alignment:
Q  175 aaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnng 274  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||       |    
T  2490297 aaagggaaat-atatattaattattgcattgaaaattgtttaattaattcataaataagtcaacaaaacttcattttatggtaaaaatttcctttttttg 2490199  T
Q  275 tatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |||||||||||  |||| | |||||||||||||||||||||||||||    
T  2490198 tatgcttaacccgtgcctcgggggcaccggttagcatgacccttatt 2490152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 37479594 - 37479689
Alignment:
Q  156 cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttt 251  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37479594 cactgattaaggataataaaaaaggaaattatatgttaattattgccttgaaaattgtttaattaatctataaataaatcaacaaaacttcctttt 37479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 321
Target Start/End: Original strand, 2270564 - 2270716
Alignment:
Q  168 ataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaaatttccn 267  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||||||||||  ||| ||||| |     
T  2270564 ataataaaaagggaa-ttatatgttaattattgtattgaaaattgtttaattaatgcataaataagtcaataaaacttccttttattgtaagaattttct 2270662  T
Q  268 nnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
           |||||||||| | ||| || | |||||||||||| ||||||||||||    
T  2270663 ttttttatatgcttaacgagtgctccggaggcaccggttagtatgacccttatt 2270716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 321
Target Start/End: Original strand, 13643015 - 13643202
Alignment:
Q  133 aaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||||||| |||| ||||| |||||||||||||||  ||||||| |||||||||  || ||| |||||||||| || | |||||||| |||||  |    
T  13643015 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg-aaattatatagtagttaatgcattgaaa-ttatgtaattaatttataataa 13643112  T
Q  232 agtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |||||| |||| ||||||||||| ||| ||||  |       ||||||||||||| ||||| ||| ||||||||||||| ||||||||||    
T  13643113 agtcaaaaaaaattccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggacccttatt 13643202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 321
Target Start/End: Original strand, 13743440 - 13743627
Alignment:
Q  133 aaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||||||| |||| ||||| |||||||||||||||  ||||||| |||||||||  || ||| |||||||||| || | |||||||| |||||  |    
T  13743440 aaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg-aaattatatagtagttaatgcattgaaa-ttatgtaattaatttataataa 13743537  T
Q  232 agtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |||||| |||| ||||||||||| ||| ||||  |       ||||||||||||| ||||| ||| ||||||||||||| ||||||||||    
T  13743538 agtcaaaaaaaattccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggacccttatt 13743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 4811557 - 4811682
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||| || ||||||  |||||| ||||||| ||| |||||| | |||||||||  |||||||||||||||||||||| ||||||||  ||||    
T  4811557 gggaaatgctaatcggtgcctcaagggcaccggttaagaatactaaaaaagaaaattatatagtaattattgcattgaaaattgtataattaattcataa 4811656  T
Q  229 ataagtcaacaaaacttccttttatg 254  Q
    |||| ||||||||  ||| |||||||    
T  4811657 ataaatcaacaaagtttctttttatg 4811682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 316
Target Start/End: Complemental strand, 16888728 - 16888544
Alignment:
Q  131 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    |||||||||||||| |||| |||||||| |||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||      
T  16888728 ggaaatgctaaccggtgcccccgggcacaggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataata 16888631  T
Q  231 aagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    ||||||| || |  ||||||||||| ||| ||||  |       ||||||||||||| |||||| |||||||||||||||| |||||    
T  16888630 aagtcaaaaacagtttccttttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 16888544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 316
Target Start/End: Original strand, 34228680 - 34228868
Alignment:
Q  128 atgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||||||||| |||| | ||| |||||||||||||| || |||| |||||||||||  |||||| ||||||| ||||||| ||||||||  ||    
T  34228680 atgggaaatgctaaccggtgccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattgat 34228777  T
Q  227 aaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    ||  ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| |||||    
T  34228778 aataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 27988685 - 27988499
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  27988685 gggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttataa 27988588  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| || ||| |||||||||||||||| ||||||    
T  27988587 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcaggaccct 27988499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 28045987 - 28045801
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  28045987 gggaaatgctaaccggtgcctccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatttataa 28045890  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| || ||| |||||||||||||||| ||||||    
T  28045889 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcaggaccct 28045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 4537930 - 4537741
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||  |||||||||||  || ||| ||||||| ||||| | ||||||||  ||||    
T  4537930 gggaaatgctaaccggtgcctccggggcactggttaaggat-ataaaataggaaattatatagtagttaatgcattg-aaattatgtaattaattgataa 4537833  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||  |||||||| |||||||||||||| ||||||||    
T  4537832 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccctta 4537741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 168466 - 168653
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  168466 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 168563  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      | ||||| || |  ||||||||||| ||| |||| |        ||||||||||||| |||||| |||||||||||||||| ||||||    
T  168564 taatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccct 168653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 326
Target Start/End: Complemental strand, 30675769 - 30675563
Alignment:
Q  119 tattattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaa 217  Q
    ||||||| |||||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||    
T  30675769 tattattttatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaa 30675672  T
Q  218 ttaatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    ||||| |||||  | ||||| || |  ||||||||||| ||| || ||||       ||||||||||||| |||||| ||| |||||||||||| ||||     
T  30675671 ttaatttataataatgtcaaaaacagtttccttttatggtaataa-ttccttttatggtatgcttaaccagtgccccggggacaccggttagcaggacct 30675573  T
Q  317 ttattatatt 326  Q
    ||||| ||||    
T  30675572 ttattttatt 30675563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 326
Target Start/End: Original strand, 32113897 - 32114105
Alignment:
Q  119 tattattatatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaa 217  Q
    ||||||| ||||||| |||||||||| || |||||| | | ||||||||||||  ||||||| |||||||||  || ||| |||||||||| ||||||||    
T  32113897 tattattttatgggagatgctaaccggtgtctccggagtattggttaaggatatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtttaa 32113994  T
Q  218 ttaatctataaataagtcaacaaaactt--ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacc 315  Q
    ||||| |||||  |||| || || | ||  ||||||||||||| |||| ||       ||||| ||||||| ||| |||| | |||||||||||| ||||    
T  32113995 ttaatttataataaagtaaaaaacagtttcccttttatgataataattcccttttatagtatgtttaaccagtgctccagagccaccggttagcaggacc 32114094  T
Q  316 cttattatatt 326  Q
    |||||| ||||    
T  32114095 cttattttatt 32114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 2490375 - 2490320
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaat 184  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  2490375 gggaaatgctaaccggtgcctccggggcacaggttaaggataataaaaagggaaat 2490320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 33899190 - 33899108
Alignment:
Q  135 atgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    |||||||||| |||| | |||||||||||||| || ||||||| |||||||||||  ||||||||| |||||||||||| ||||    
T  33899190 atgctaaccggtgcc-cggggcactggttaagaatgataaaaaaggaaattatataataattattgaattgaaaattgtgtaat 33899108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 37373204 - 37373296
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||||| |||| |||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  37373204 atgggaaatgctaaccggtgcccccggacactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaat 37373296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 309
Target Start/End: Complemental strand, 2805451 - 2805267
Alignment:
Q  125 tatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    ||||||||||||| |||||  |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||| |    
T  2805451 tatatgggaaatgttaaccagtgcccccgggacactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaacc 2805354  T
Q  224 tataaataagtcaaca-aaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagc 309  Q
    |||||  ||||||| |  |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| | |||||||||||||    
T  2805353 tataataaagtcaaaagcagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagc 2805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 22199239 - 22199338
Alignment:
Q  159 tggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataa 258  Q
    ||||||||| || |||||| |||| ||||||  ||| ||||||||||||| || | ||||||||  |||||||||| ||||||  |||||||||| ||||    
T  22199239 tggttaaggttactaaaaatggaatttatatagtaactattgcattgaaatttatgtaattaattcataaataagttaacaaagtttccttttataataa 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 37714063 - 37713989
Alignment:
Q  155 gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||| |||||||||| |||||| | |||||| ||  || ||||||||||||||||| | |||||||||||||||    
T  37714063 gcactagttaaggatactaaaaaagaaaattacataatagttattgcattgaaaattatgtaattaatctataaa 37713989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 316
Target Start/End: Complemental strand, 16394253 - 16394061
Alignment:
Q  124 ttatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||   ||||||  |||||||||  || ||| |||||||||| |  | ||||||||    
T  16394253 ttatatgggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaaga-aaattatataatagttaatgcattgaaa-taatgtaattaat 16394156  T
Q  223 ctataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||||  ||||||| || | || ||||||||| ||| ||||  |       ||||||||||||| |||||| |||||||||||||||| |||||    
T  16394155 tgataataaagtcaaaaacagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 16394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 21595848 - 21595943
Alignment:
Q  131 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||| |||| ||||||||||||||||| | || |||| |||||||||||   | ||| ||||||| ||||||| |||||||| |||||    
T  21595848 ggaaatgctaaccggtgcccccgggcactggttaagggt-atgaaaaaggaaattatataggagttaatgcattg-aaattgtgtaattaatttataa 21595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 11112639 - 11112745
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | ||| |||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  11112639 gggaaatgctaactggtgcatccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 11112736  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  11112737 taaagtcaa 11112745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 33357315 - 33357209
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||| |||| ||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  33357315 gggaaatgctaactggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 33357218  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  33357217 taaagtcaa 33357209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 5725646 - 5725596
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagg 179  Q
    ||||||||||||||| ||||||||| | ||||||||| |||||||||||||    
T  5725646 gggaaatgctaaccggtgcctccggtgaactggttaaagataataaaaagg 5725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 9253944 - 9253899
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||    
T  9253944 gtatgcttaaccaatgtcccaggggcaccggttagca-gacccttat 9253899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 20831737 - 20831633
Alignment:
Q  132 gaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    ||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| |||| || |||||||| |||||      
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaatagtataattaatttataata 20831640  T
Q  231 aagtcaa 237  Q
    |||||||    
T  20831639 aagtcaa 20831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 33124650 - 33124580
Alignment:
Q  159 tggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||||| | |||| |||| ||||||  || ||||||||||||||||||| |||| ||| ||||||    
T  33124650 tggttaaggatacttaaaaaggaagttatatagtagttattgcattgaaaattgtgtaatcaatttataaa 33124580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 9063247 - 9063051
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatt 219  Q
    |||| |||| ||||||||||||||| || | | | ||||||||||||||| || |||| |||||||||||  || ||| ||||||| |||| ||  ||||    
T  9063247 attagtataagggaaatgctaaccggtgtcccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaatcgtgcaatt 9063150  T
Q  220 aatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||| |||||  ||||||| || || || |||||||| ||| |||| ||        |||||||||||| |||||| |  ||||||||||||| ||||||    
T  9063149 aatttataataaagtcaaaaacaattttcttttatggtaataattcccttttgtgatatgcttaaccagtgccccggaagcaccggttagcaggaccct 9063051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 12652627 - 12652707
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaa 207  Q
    |||||||||||||||||| |||| | || ||||||||||||||| || |||| |||||||||||  || ||| |||||||||    
T  12652627 tatgggaaatgctaaccggtgcccctggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattgaa 12652707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 40737257 - 40737217
Alignment:
Q  279 cttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    |||||||||||||| | |||||||||||||||| |||||||    
T  40737257 cttaaccattgccctaagggcaccggttagcataaccctta 40737217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 34706720 - 34706908
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34706720 gggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 34706819  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||||||||||||||||||||||||| ||| |||||||       ||||||||||||| |||||| |||||||||||||||| ||||||    
T  34706820 ataagtcaacaaaacttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccct 34706908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 129 - 314
Target Start/End: Complemental strand, 34712313 - 34712127
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||    
T  34712313 tgggaaatgctaaccggtgcctccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaattttttttaattaatctata 34712214  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgac 314  Q
    ||||||||||||||||||||||||||| ||| |||||||       ||||||||||| | |||||| ||||||||||||||||||||    
T  34712213 aataagtcaacaaaacttccttttatggtaagaatttccattttttgtatgcttaactagtgccccgggggcaccggttagcatgac 34712127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 153 - 308
Target Start/End: Original strand, 1127839 - 1127994
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||    
T  1127839 gggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatttataaataagtcaacaaaactttttttta 1127938  T
Q  253 tgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttag 308  Q
    || ||| ||||| |       ||||||||||||| ||||||  |||||||||||||    
T  1127939 tggtaagaattttctttttttgtatgcttaaccagtgccccgagggcaccggttag 1127994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 31379531 - 31379418
Alignment:
Q  151 ccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttt 250  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  31379531 ccgggtaccggttaaggataataaaaagggaaattatatattaattattgcatttaaaattgtttaattaatccataaataagtcaacataacttccttt 31379432  T
Q  251 tatgataaaaattt 264  Q
    |||| ||| |||||    
T  31379431 tatggtaagaattt 31379418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 319
Target Start/End: Complemental strand, 32929694 - 32929505
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| || ||||||||| ||  ||||||| ||||||||| ||||||| ||||||| ||||||| |||||||| |||||    
T  32929694 gggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaagg-aaattatatattaattaatgcattg-aaattgtgtaattaatttataa 32929597  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| ||||||||    
T  32929596 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 32929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 326
Target Start/End: Complemental strand, 12145308 - 12145107
Alignment:
Q  125 tatatgggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||||||||||||||||||| |||| || | ||||| ||||||||||  ||||||| |||||||||  || ||| |||||||||| |||| ||||||||     
T  12145308 tatatgggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtgtaattaatt 12145211  T
Q  224 tataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    |||||  ||||||| || | || ||||||||||||| |||||||       ||||||||||||| ||| || | |||||||||||||| ||||| || ||    
T  12145210 tataataaagtcaaaaacagtttccttttatgataataatttccttttatagtatgcttaaccagtgctccggaggcaccggttagcaggacccataata 12145111  T
Q  323 tatt 326  Q
    ||||    
T  12145110 tatt 12145107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 23402138 - 23402327
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||||||||| |||||||||||||| || |||| |||||||||||  |||||| ||||||| |||||||  ||||||| |||||    
T  23402138 gggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattg-aaattgtgaaattaatttataa 23402235  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||  |||||| | |||||||||||||| ||||||||    
T  23402236 taaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccctta 23402327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 125 - 310
Target Start/End: Complemental strand, 32985384 - 32985199
Alignment:
Q  125 tatatgggaaatgctaaccgatgcc-tccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    ||||||| |||||| ||||| |||| || ||||| |||||||||||| |||||| |||||||||||  || ||| || ||||||| |||| ||||||||     
T  32985384 tatatggaaaatgcaaaccggtgccctcggggcattggttaaggata-taaaaaaggaaattatatagtagttaatgtattgaaa-ttgtgtaattaatt 32985287  T
Q  224 tataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagca 310  Q
    |||||  ||||||| || | || ||||||||||||| |||| ||       ||||||||||||| |||||| ||||||||||||||||    
T  32985286 tataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 32985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 319
Target Start/End: Original strand, 392093 - 392285
Alignment:
Q  127 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| ||    
T  392093 tatgggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaattta 392190  T
Q  226 taaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    |||  | ||||| || |  ||||||||||| ||| ||||  |       ||||||||||||| |||||| |||||||||||||||| ||||||||    
T  392191 taataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 321
Target Start/End: Original strand, 3515766 - 3515957
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  3515766 gggaaatgctaaccggtgcccccagggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 3515863  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
      | ||||| || |  ||||||||||| ||| |||| ||       ||||| ||||||  ||||||||||||||||||||||| ||||| ||||    
T  3515864 taatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggacccatatt 3515957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 324
Target Start/End: Original strand, 4215690 - 4215889
Alignment:
Q  125 tatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||| |||||||| |||||| |||| ||||| |||||||||||  ||  ||||||| |||||||||  || ||| |||||||||| |||| ||||||||     
T  4215690 tataagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaagg-aaattatataatagttaatgcattgaaa-ttgtgtaattaatt 4215787  T
Q  224 tataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    |||||  | ||||| || | || ||||||||| ||| |||||||       ||||||||||||| |||||| |||||| ||||||||| ||||||| |||    
T  4215788 tataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggacccttctta 4215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 21878535 - 21878427
Alignment:
Q  128 atgggaaatgctaaccgatgcct-ccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| || |||| |||||||||||  || ||| ||||||| ||||| |||||||||| |||    
T  21878535 atgggaaatgctaaccggtgcctcccgggcacgggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattatttaattaatttat 21878438  T
Q  227 aaataagtcaa 237  Q
    ||  |||||||    
T  21878437 aataaagtcaa 21878427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 263
Target Start/End: Complemental strand, 29451300 - 29451168
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||| | ||||||||||||| |||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||  |||||     
T  29451300 gggaaatgctaactggtgcctccgggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaaattataat 29451203  T
Q  230 taagtc-aacaaaacttccttttatgataaaaatt 263  Q
     ||||| |||| |  ||||||||||||||| ||||    
T  29451202 aaagtcaaacacagtttccttttatgataataatt 29451168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 22021731 - 22021788
Alignment:
Q  197 attgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||||||||||| |||| ||||||||  |||||||||||||||||| |||||||||||    
T  22021731 attgcattgaaacttgtgtaattaattcataaataagtcaacaaaatttccttttatg 22021788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 7851345 - 7851239
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| || ||||||||||||||||| || |||| | |||||||||  |||||| |||||| |||||||| |||||||| |||||    
T  7851345 gggaaatgctaaccggtgcccccagggcactggttaaggat-atgaaaaagaaaattatatagtaattaatgcatt-aaaattgtgtaattaatttataa 7851248  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  7851247 taaagtcaa 7851239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 317
Target Start/End: Original strand, 2580949 - 2581139
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| ||||   | || ||||||||| |||| |||||| |||||||||||  || ||| |||||||||| || | |||||||| ||    
T  2580949 tatgggaaatgctaaccggtgcccttgaggtactggttaatgata-taaaaaaggaaattatatagtagttaatgcattgaaa-ttatgtaattaattta 2581046  T
Q  226 taaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||  ||||||| || || ||||||||||| ||| |||| ||       ||||||||||||| | |||| || ||||||||||||| ||||||    
T  2581047 taataaagtcaaaaataatttccttttatggtaataattcccttttatggtatgcttaaccaataccccgggagcaccggttagcaggaccct 2581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 18276800 - 18276612
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||| |||| | |||| | ||||||||||||||||||  ||||||| |||||||||  || ||| |||||||||  |||| |||||||| |||||     
T  18276800 gggaaatgttaactggtgcccctgggcactggttaaggatatgaaaaagg-aaattatatagtagttaatgcattgaat-ttgtgtaattaatttataat 18276703  T
Q  230 taagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtat---gcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
     ||||||| || | || ||||||||| ||| |||||||       ||||   ||||||||| |||||| |||||||||||||||| |||||    
T  18276702 aaagtcaaaaacagtttccttttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 20897948 - 20898039
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||| |||| || ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  20897948 gggaaatgctaaccggtgcccccagggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 20898039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 22021655 - 22021732
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    ||||||| ||||||| || ||||||  ||| ||||||  ||||||||||||||||| |||| ||||||||| ||||||    
T  22021655 gggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 22021732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 3246247 - 3246180
Alignment:
Q  155 gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||||| ||||||||| |||||||| ||||||||   ||||||||||||| |||||||| |||||||||    
T  3246247 gcactgattaaggatactaaaaagg-aaattatacagtaattattgcattaaaaattgtgtaattaatc 3246180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 29978232 - 29978291
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 189  Q
    |||||||||||||||| ||||||||| |||| ||||||||| || |||| |||||||||||    
T  29978232 tgggaaatgctaaccggtgcctccggacactagttaaggat-atgaaaaaggaaattatat 29978291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 13417152 - 13417051
Alignment:
Q  126 atatgggaaatgctaaccgat-gcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatct 224  Q
    |||||||||||| ||||||||  |||| ||||||| ||||||||| || |||| ||||||||||| ||| ||| || |||| ||||||| |||||||| |    
T  13417152 atatgggaaatgttaaccgataccctcagggcactagttaaggat-atgaaaaaggaaattatatattagttaatgtattg-aaattgtgtaattaattt 13417055  T
Q  225 ataa 228  Q
    ||||    
T  13417054 ataa 13417051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 28225211 - 28225326
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    ||||||||||||||||||||||| | |||||| |||  || |||||||||||  |||||||  ||||||||  |||||| || |||| ||||||| ||||    
T  28225211 attattatatgggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaagg--aattatatagtaattaatgtattg-aaattgtgtaat 28225307  T
Q  219 taatctataaataagtcaa 237  Q
    |||| |||||  |||||||    
T  28225308 taatttataataaagtcaa 28225326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 252476 - 252418
Alignment:
Q  160 ggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    ||||||||||| ||||||  |||||||||| ||| |||||| |||||||||||| ||||    
T  252476 ggttaaggatactaaaaatagaaattatatattagttattgtattgaaaattgtgtaat 252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 264
Target Start/End: Complemental strand, 23629764 - 23629628
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||| ||||||||||| | |||||||| |||||||| || |||| | |||||||||  || ||| || |||| ||||||| |||||| | |||    
T  23629764 tatgggaaatgttaaccgatgccccggggcactgattaaggat-atgaaaaagaaaattatatagtagttaatgtattg-aaattgtgtaattactttat 23629667  T
Q  227 aaataagtcaacaa-aacttccttttatgataaaaattt 264  Q
    ||  ||||||| || || |||||||||||| || |||||    
T  23629666 aataaagtcaaaaacaatttccttttatgacaataattt 23629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 27433492 - 27433583
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||||||| ||||||||    
T  27433492 gggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 27433583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 34396718 - 34396607
Alignment:
Q  125 tatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||| ||||||||||||||| |||| || || ||| |||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||     
T  34396718 tataagggaaatgctaaccggtgcccccaggacacaggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatt 34396621  T
Q  224 tataaataagtcaa 237  Q
    |||||  |||||||    
T  34396620 tataataaagtcaa 34396607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 34477720 - 34477645
Alignment:
Q  145 atgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||| ||||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  34477720 atgcccccgggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 34477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 2350644 - 2350758
Alignment:
Q  122 tattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatta 220  Q
    |||| |||| ||||||||||||| |||  ||||| |||||||||||||| || |||| |||||||||||  || ||| || |||| ||||||| ||||||    
T  2350644 tattttatgtgaaatgctaaccggtgctcccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaatta 2350741  T
Q  221 atctataaataagtcaa 237  Q
    || |||||  |||||||    
T  2350742 atttataataaagtcaa 2350758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 24663237 - 24663197
Alignment:
Q  280 ttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    ||||||| |||||||||||||||||||||||  ||||||||    
T  24663237 ttaaccagtgccccaggggcaccggttagcaacacccttat 24663197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 32929657 - 32929689
Alignment:
Q  279 cttaaccattgccccaggggcaccggttagcat 311  Q
    ||||||||||||||| |||||||||||||||||    
T  32929657 cttaaccattgccccgggggcaccggttagcat 32929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 153 - 316
Target Start/End: Original strand, 31467743 - 31467906
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31467743 gggcaccggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 31467842  T
Q  253 tgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    || ||| |||||||       ||||||||||||| |||||||||| |||||||||||| |||||    
T  31467843 tggtaagaatttcctttttttgtatgcttaaccagtgccccagggacaccggttagcaagaccc 31467906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 117 - 320
Target Start/End: Complemental strand, 14214249 - 14214046
Alignment:
Q  117 aatattattatatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgttt 215  Q
    |||||||| ||| |||||||| |||||| |||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14214249 aatattataataagggaaatgttaaccggtgctcccgaggcacaggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgttt 14214150  T
Q  216 aattaatctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacc 315  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||  || ||| ||||||||||||||||| |||    
T  14214149 aattaatccataaataagtcaacaaaacttccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagcat-acc 14214051  T
Q  316 cttat 320  Q
    |||||    
T  14214050 cttat 14214046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 30889589 - 30889432
Alignment:
Q  157 actggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgat 256  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30889589 actggttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatctataaataagtcaacaaaacttccttttatgat 30889490  T
Q  257 aaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgac 314  Q
    ||||||||||       ||||||||||||| | |||| | ||||||| ||||||||||    
T  30889489 aaaaatttcctttttttgtatgcttaaccagtaccccggaggcaccgattagcatgac 30889432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 132 - 319
Target Start/End: Complemental strand, 1383457 - 1383270
Alignment:
Q  132 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    ||||||||||||| || | ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  1383457 gaaatgctaaccggtgtc-ccgggtactggttaaggataataagaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaaaa 1383359  T
Q  232 agtcaacaaaacttccttttatgataaaaatttcc-nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    ||||||||||||||||||||||| ||| |||||||        ||||||||||||  || ||||| |||||||||||||||||||||||    
T  1383358 agtcaacaaaacttccttttatggtaagaatttccttttttttgtatgcttaacccgtgtcccagaggcaccggttagcatgaccctta 1383270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 130 - 264
Target Start/End: Complemental strand, 21945047 - 21944912
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| ||||    
T  21945047 gggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatatattaattattgcattaaaaattgtttaattaatccataa 21944948  T
Q  229 ataagtcaacaaaacttccttttatgataaaaattt 264  Q
    |||||||||||||||||||||||||| |||||||||    
T  21944947 ataagtcaacaaaacttccttttatggtaaaaattt 21944912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 130 - 266
Target Start/End: Original strand, 16972176 - 16972313
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  16972176 gggaaatgctaaccgatgcccccggagcactggttaaggataataaaaagaaaaattatatgttaattattgcattaaaaattatttaattaatccataa 16972275  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16972276 ataagtcaacaaaacttccttttatgataataatttcc 16972313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 32188184 - 32188042
Alignment:
Q  122 tattatatgggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatta 220  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32188184 tattttatgggaaatgctaaccgatgcctccgaggcactggttaag-ataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaatta 32188086  T
Q  221 atctataaataagtcaacaaaacttccttttatgataaaaatttc 265  Q
    || ||||||||||| |||||||||| |||||||||||||||||||    
T  32188085 atttataaataagttaacaaaactt-cttttatgataaaaatttc 32188042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 39234828 - 39234966
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    |||||||||||||||||| |||  | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  39234828 tatgggaaatgctaaccggtgctccggggcacgggttaaggataataaaaagggaaattatatgttaattattgcattgacaattgtttaattaatccat 39234927  T
Q  227 aaataagtcaacaaaacttccttttatgataaaaatttc 265  Q
    |||||| ||||||||||||||||||||| ||| ||||||    
T  39234928 aaataaatcaacaaaacttccttttatggtaagaatttc 39234966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 129 - 266
Target Start/End: Complemental strand, 40608723 - 40608586
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  40608723 tgggaaatgctaaccggtgctcccgggacactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccat- 40608625  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    ||||| ||||||||||||||||||||| ||| |||||||    
T  40608624 aataaatcaacaaaacttccttttatggtaagaatttcc 40608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 14349592 - 14349684
Alignment:
Q  162 ttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  14349592 ttaaggataataaaaagataaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaatttctttttatg 14349684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 317
Target Start/End: Complemental strand, 34651019 - 34650832
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||| |||| ||||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  34651019 tgggaaatgctaaccggtgcccccgggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 34650922  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      | ||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| ||||||    
T  34650921 taatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 34650832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 322
Target Start/End: Complemental strand, 11958154 - 11957961
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| ||||| ||| |||||| |||| |||||| |||||||||||  || ||| |||| ||||| |||| ||||||||  |||    
T  11958154 tgggaaatgctaaccggtgcccccggggcacaggttaaagata-taaaaaaggaaattatatagtagttaatgcaatgaaa-ttgtgtaattaattgata 11958057  T
Q  228 aataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    |  ||||||| || | || ||||||||| ||| |||| ||       | ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  11958056 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcaggacccttatta 11957961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 126 - 326
Target Start/End: Original strand, 6283558 - 6283758
Alignment:
Q  126 atatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatct 224  Q
    ||||||||||||||||||| ||||||| ||||||| ||||| ||| || |||| | |||||||||  |||||| ||||||| ||||||| |||||||| |    
T  6283558 atatgggaaatgctaaccggtgcctccggggcactagttaaagat-atgaaaaagaaaattatataataattaatgcattg-aaattgtgtaattaattt 6283655  T
Q  225 ataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttattat 323  Q
    ||||  ||||||| || || || |||||||| ||| ||||          ||||||||||||| ||||| |||||||||||||||||||| || ||| ||    
T  6283656 ataataaagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagcatgaaccatataat 6283755  T
Q  324 att 326  Q
    |||    
T  6283756 att 6283758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 35132522 - 35132709
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| | ||||| ||||||| |||||||| |||||    
T  35132522 gggaaatgctaaccggtgcccccgggacactggttaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtgtaattaatttataa 35132619  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
      ||||||| || | ||   |||||| ||| ||||  |       ||||||||||||| |||||| |||||||||||||||| |||||||    
T  35132620 taaagtcaaaaacagttttctttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccctt 35132709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 6042210 - 6042135
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||| |||| ||||||   |||||||||  |||||||||||||||||||||| ||||||||| |||||    
T  6042210 gggcactggttaaagatactaaaaaaa-aaattatatagtaattattgcattgaaaattgtgtaattaatccataaa 6042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 10069966 - 10070060
Alignment:
Q  127 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    |||||||||||||||||| |||| || ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  10069966 tatgggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 10070060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 21547580 - 21547474
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||| || | |||||||  |||||||||| ||||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  21547580 tgggaaatgctaaccggtgtccccgggcatcggttaaggat-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 21547483  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  21547482 taaagtcaa 21547474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 10054538 - 10054441
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||| ||  ||||||| |||||||||  |||||| ||||||| ||||||| |||||||| |||||    
T  10054538 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg-aaattatataataattaatgcattg-aaattgtgtaattaatttataa 10054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 31909632 - 31909737
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||| |||||| |||||||||  ||||||||||||| || ||||||||||||||||  || ||| ||||||| ||||||| ||||| || |||||     
T  31909632 gggaaatgttaaccggtgcctccggatactggttaaggat-attaaaagggaaattatatagtagttaatgcattg-aaattgtgtaattgatttataat 31909729  T
Q  230 taagtcaa 237  Q
     |||||||    
T  31909730 aaagtcaa 31909737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 13661808 - 13661899
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||| |||| |||| ||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  13661808 gggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 13661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 5302437 - 5302365
Alignment:
Q  159 tggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||  ||| ||||||  ||||||||||  || |||||| |||||||||||| |||||||||||||||||    
T  5302437 tggttaaaaatattaaaaaaagaaattatataatagttattgtattgaaaattgtgtaattaatctataaata 5302365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 35504427 - 35504329
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| ||||| |||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| ||||    
T  35504427 tgggaaatgctaaccggtgcccccgggacactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttata 35504330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 4837258 - 4837363
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||| |||||| |||| | |||||| ||||||| |||  ||||||| |||||||||  |||||| ||||||| ||||||| |||||||| |||||     
T  4837258 gggaaatgttaaccggtgccccggggcaccggttaagaatatgaaaaagg-aaattatatagtaattaatgcattg-aaattgtgtaattaatttataat 4837355  T
Q  230 taagtcaa 237  Q
     |||||||    
T  4837356 aaagtcaa 4837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 8927593 - 8927554
Alignment:
Q  279 cttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  8927593 cttaaccagtgccccaggggcaccggttagcaggaccctt 8927554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 9721796 - 9721687
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgggc-actggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||||||||| |||||| || |  ||||| |||||||||| |||  ||||||| |||||||||  |||||| |||||||||| ||||||||||||| ||    
T  9721796 tatgggaaatgttaaccggtgtcctcgggctactggttaagaatatgaaaaagg-aaattatatagtaattaatgcattgaaa-ttgtttaattaattta 9721699  T
Q  226 taaataagtcaa 237  Q
    |||  |||||||    
T  9721698 taataaagtcaa 9721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 40564446 - 40564387
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccc-ttattatattgtaatg 332  Q
    ||||||||||||| | ||||| ||||||||||||||| ||||| || |||||||||||||    
T  40564446 gtatgcttaaccaataccccaagggcaccggttagcaggacccttttttatattgtaatg 40564387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 8787483 - 8787533
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttattata 324  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||| |||||    
T  8787483 gtatgcttaacctgtgccccgggggcaccggttagcaggaccctttttata 8787533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 6284822 - 6284893
Alignment:
Q  156 cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||||| |||||| |||||||||||  |||||| || |||| ||||||| |||||||| ||||||    
T  6284822 cactggttaaggatactaaaaa-ggaaattatatagtaattaatgtattg-aaattgtataattaatttataaa 6284893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 1069658 - 1069610
Alignment:
Q  181 aaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||  ||||||||| |||||||||||||||||| ||| |||||    
T  1069658 aaattatataataattattgtattgaaaattgtttaattgatccataaa 1069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 10070093 - 10070137
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||| || |||||| ||||||||||||| |||||||    
T  10070093 gtatgcttaaccaatgtcccaggagcaccggttagcaggaccctt 10070137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 126 - 318
Target Start/End: Original strand, 38128287 - 38128480
Alignment:
Q  126 atatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatct 224  Q
    |||||||||| | ||| || |||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38128287 atatgggaaaggttaatcggtgcccccgggacaccggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatct 38128386  T
Q  225 ataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||| |||||| | ||||||||||||||||||||||    
T  38128387 ataaataagtcaacaaaacttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccctt 38128480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 6097336 - 6097523
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  6097336 gggaaatgctaaccgatgcccccggggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccataa 6097435  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |||||||||||||||||||||||||| ||| |||||||        |||||||||||  |||||| | ||||| ||||||||||||||    
T  6097436 ataagtcaacaaaacttccttttatggtaagaatttcctttttttatatgcttaacccgtgccccggaggcactggttagcatgaccc 6097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 132 - 319
Target Start/End: Original strand, 19434495 - 19434682
Alignment:
Q  132 gaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    |||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19434495 gaaatgttaaccggtgcctccggggcactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaat 19434594  T
Q  231 aagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    |||||||||||||||||||||||| ||| ||||| |       ||||||||||||| || ||| ||||||||||| |||||||||||||    
T  19434595 aagtcaacaaaacttccttttatggtaagaattttctttttttgtatgcttaaccagtg-cccgggggcaccggtcagcatgaccctta 19434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 34557076 - 34556891
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||| | |||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34557076 gggaaatgctaactggtgccccggggcattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaa 34556977  T
Q  230 taagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||||||||||||||| |||||| | ||| |||||||       ||||||||||||| |||||  |||||||||||||||||||||||    
T  34556976 taagtcaacaaaactttcttttagggtaagaatttcctttttttgtatgcttaaccagtgccc--ggggcaccggttagcatgaccct 34556891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 13106504 - 13106364
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgggcactggttaagga-taataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| ||||  |||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  13106504 tatgggaaatgctaaccggtgccctcgggcactggttaaagaataataaaaagggaaattatttgttaattattgcattgaaaattgtttaattaatcca 13106405  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  13106404 taaataagtcaacaaaacttccttttatggtaagaatttcc 13106364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 20402389 - 20402578
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| || | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  20402389 gggaaatgctaaccggtgtccccgggacattggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattatttaattaatccataa 20402488  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttcc-nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||||||||||||||||||||||||  ||| |||||||        ||||||||||||| ||||||  | ||||||||||||||||||||    
T  20402489 ataagtcaacaaaacttccttttatagtaagaatttccttttttttgtatgcttaaccaatgcccccagagcaccggttagcatgaccct 20402578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 153 - 266
Target Start/End: Original strand, 32805562 - 32805675
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  32805562 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattaaaaattgtttaattaatccataaataagtcaacaaaacttcctttta 32805661  T
Q  253 tgataaaaatttcc 266  Q
    || ||| |||||||    
T  32805662 tggtaagaatttcc 32805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 133 - 318
Target Start/End: Complemental strand, 30924174 - 30923986
Alignment:
Q  133 aaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  30924174 aaatgctaaccggtgcccccggggcacgggttaaggataataaaaagggaaattatatgttaattagtgcattgaaaattgtttaattaattcataaata 30924075  T
Q  232 agtcaacaaaacttccttttatgataaaaatttcc--nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||||||||||||| ||| |||||||         ||||||||||| | ||||||  ||||||| |||||||||||||||    
T  30924074 agtcaacaaaacttccttttatggtaagaatttcctttttttttgtatgcttaacgagtgccccgagggcaccagttagcatgaccctt 30923986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 45842968 - 45842844
Alignment:
Q  121 ttattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatta 220  Q
    |||||||  ||||||||||||||| |||    |||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||| ||||||||    
T  45842968 ttattattagggaaatgctaaccggtgctctggggcactggttagggataataaaaaagaaaattatatgttaattattgcattaaaaattatttaatta 45842869  T
Q  221 atctataaataagtcaacaaaactt 245  Q
    ||  |||||||||||||||||||||    
T  45842868 attcataaataagtcaacaaaactt 45842844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 24798588 - 24798403
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||||| |||| ||||||||| ||| ||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||     
T  24798588 gggaaatgctaaccggtgcccccgggcacttgttgaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataat 24798491  T
Q  230 taagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
     ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||| ||||||| |||||    
T  24798490 aaagtcaaaaacagtttccttttatggtaataattcccttttatagtatgcttaaccagtgccccgggggcaccagttagcaggaccc 24798403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 34333284 - 34333472
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||| ||  ||||||| |||||||||  |||||| ||||||| ||||||| |||||||| |||||    
T  34333284 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg-aaattatatagtaattaatgcattg-aaattgtgtaattaatttataa 34333381  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      | ||||| | |  ||||||||||| ||| |||| |        ||||| ||||||  |||||| |||||||||||||||| ||||||||    
T  34333382 taatgtcaaaacagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccctta 34333472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 34606261 - 34606448
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||||||||| |||||||||||||| || |||| |||||||||||  |||||| ||||||| |||||||  ||||||| |||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattg-aaattgtgaaattaatttataa 34606358  T
Q  229 ataagtcaaca-aaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      ||||||| |  |  ||||||||||| ||| |||| ||       ||||||||||||  |||||| || ||||||||||||| ||||||    
T  34606359 taaagtcaaaagcagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccct 34606448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 4628566 - 4628752
Alignment:
Q  130 gggaaatgctaaccgatgcctc-cgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||||||| |  |||||| |||||||||| || |||| |||||||||||  || ||| | ||||| |||||||||||||||| |||||    
T  4628566 gggaaatgctaaccgatgcccctggggcaccggttaaggat-atgaaaaaggaaattatatagtagttaatacattg-aaattgtttaattaatttataa 4628663  T
Q  229 ataagtca-acaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      |||||| | | |  || |||||||| ||| |||| ||       ||||||||||||| ||||  ||||||||||||||||| |||||    
T  4628664 taaagtcagaaacagtttacttttatggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcaggaccc 4628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 18485961 - 18486058
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| ||||||||||||||| | |||| |||||||||||  |||||| || |||| ||||||| |||||||| |||||    
T  18485961 gggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaa-ggaaattatatagtaattaatgtattg-aaattgtgtaattaatttataa 18486058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 43594225 - 43594116
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| || | ||||  ||||||||||||||| |||||| |||||||||||  || ||| ||||||| ||||||| |||||||| ||    
T  43594225 tatgggaaatgctaaccggtgtccccggaacactggttaaggata-taaaaaaggaaattatataatagttaatgcattg-aaattgtataattaattta 43594128  T
Q  226 taaataagtcaa 237  Q
    |||  |||||||    
T  43594127 taataaagtcaa 43594116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 319
Target Start/End: Original strand, 30810679 - 30810844
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttcctttt 251  Q
    ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  ||||||| || |  || |||||    
T  30810679 gggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataataaagtcaaaaacagttttctttt 30810776  T
Q  252 atgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    ||| ||| ||||| |       ||||| ||||||| ||||||||||| ||||||||| | ||||||||    
T  30810777 atggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttagtaggaccctta 30810844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 4088525 - 4088488
Alignment:
Q  192 taattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4088525 taattattgcattgaaaattgtataattaatctataaa 4088488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 316
Target Start/End: Original strand, 24438476 - 24438663
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| ||||| |||| ||||||| ||  ||||||| ||| |||||  || ||| |||||||||| || | |||||||| ||||    
T  24438476 tgggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaagg-aaactatatagtagttaatgcattgaaa-ttatgtaattaatttata 24438573  T
Q  228 aataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |  | ||||| || | || ||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| |||||    
T  24438574 ataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 24438663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 38022647 - 38022579
Alignment:
Q  161 gttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||| ||| || | |||||||||  || |||||| |||||||||||| |||||||||||||||    
T  38022647 gttaaggatactaataaagaaaattatatagtagttattgtattgaaaattgtataattaatctataaa 38022579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 5239285 - 5239382
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||||| ||||||||||| | | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  5239285 gggaaatgctaaccggtgcctccggagcactggttaatggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 5239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 323
Target Start/End: Complemental strand, 13065067 - 13064869
Alignment:
Q  124 ttatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||| |||||||||||||||| ||||  |||  | ||||||||||||  ||||||| |||||||||  || ||| || ||||||  |||| ||||||||     
T  13065067 ttatttgggaaatgctaaccggtgcccacggt-attggttaaggatatgaaaaagg-aaattatataatatttaatgtattgaat-ttgtgtaattaatt 13064971  T
Q  224 tataaataagtcaacaaaac---ttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    |||||  ||||||| |||||   ||||||||||| ||| |||| ||       ||||||||||||| ||| | |||||||||||||||||  ||||||||    
T  13064970 tataataaagtcaa-aaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcagaacccttat 13064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 27456298 - 27456193
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||| | |||| ||||||||||||||||||| ||  |||  ||||||||||  || ||| ||||||| ||||||| |||||||| |||||     
T  27456298 gggaaatgctaactggtgcccccgggcactggttaaggat-atggaaaaagaaattatatagtagttaatgcattg-aaattgtgtaattaatttataat 27456201  T
Q  230 taagtcaa 237  Q
     |||||||    
T  27456200 aaagtcaa 27456193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 37631728 - 37631631
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||| |||||| ||| |||||| ||| ||||||||||| |||||| |||||||||||  |||||| |||||| |||||| | |||||||| |||||    
T  37631728 gggaaatgttaaccggtgcttccggggcacgggttaaggata-taaaaaaggaaattatataataattaatgcatt-aaaattatgtaattaatttataa 37631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 8754777 - 8754665
Alignment:
Q  124 ttatatgggaaatgctaaccgatg-cctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||||||||| || |||  | ||||||||||||||| || ||||  ||||||||||  || ||| ||||||| ||||||| ||||||||    
T  8754777 ttatatgggaaatgctaaccggtgccctgggagcactggttaaggat-atgaaaaatgaaattatatagtagttaatgcattg-aaattgtgtaattaat 8754680  T
Q  223 ctataaataagtcaa 237  Q
     |||||  |||||||    
T  8754679 ttataataaagtcaa 8754665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 28587911 - 28587968
Alignment:
Q  131 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatat 189  Q
    |||||||||||||| |||| |||| |||||||||||||| || |||| |||||||||||    
T  28587911 ggaaatgctaaccggtgcccccggacactggttaaggat-atgaaaaaggaaattatat 28587968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 34435813 - 34435747
Alignment:
Q  157 actggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    ||||||| |||||| |||||| |||||||||||  || |||||||||| |||||||| |||| ||||    
T  34435813 actggttcaggatactaaaaaaggaaattatataatagttattgcattaaaaattgtgtaatcaatc 34435747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 34546500 - 34546404
Alignment:
Q  130 gggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||||||| ||| || || |||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| ||||    
T  34546500 gggaaatgctaaccgatgcccccgaggtaccggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttata 34546404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 47656981 - 47657077
Alignment:
Q  131 ggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||| ||| || ||| |||||||||||||| || |||| | |||||||||  |||||| ||||||| ||||||| |||||||| |||||    
T  47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggat-atgaaaaagaaaattatatagtaattaatgcattg-aaattgtgtaattaatttataa 47657077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 11686507 - 11686404
Alignment:
Q  133 aaatgctaaccgatgcctccgggc-actggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||||| | ||| ||||||  |||||||||||||| |||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  |    
T  11686507 aaatgctaactggtgcttccgggatactggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataataa 11686410  T
Q  232 agtcaa 237  Q
    ||||||    
T  11686409 agtcaa 11686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 41468774 - 41468725
Alignment:
Q  174 aaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||| |||||||||||  |||||||| ||||||||||||| |||||||||    
T  41468774 aaaaaggaaattatatagtaattattacattgaaaattgtgtaattaatc 41468725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 133 - 315
Target Start/End: Complemental strand, 16572671 - 16572488
Alignment:
Q  133 aaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16572671 aaatgctaaccggtgcctccgaggcactggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaata 16572572  T
Q  232 agtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacc 315  Q
    ||||||||||||||| ||||||| ||| |||||||       |||| ||||| || |||||| |||||||||||||||||||||    
T  16572571 agtcaacaaaacttctttttatggtaagaatttcctttttttgtatacttaatcagtgccccgggggcaccggttagcatgacc 16572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 11893588 - 11893400
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||| || |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11893588 gggaaatgctaacaggtgcccccagggcactgtttaaggataataaaaagggaaattatatgttaattattgaattgaaaattatttaattaatctataa 11893489  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttcc-nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||||||||||||||||| |||||||||||||||||||        ||||||||||||| |||||| || ||||||||||||||||||||    
T  11893488 ataagtcaacaaaacttcattttatgataaaaatttccttttttttgtatgcttaaccagtgcccc-ggagcaccggttagcatgaccct 11893400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 22225930 - 22225795
Alignment:
Q  132 gaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  22225930 gaaatgctaaccggtgcccccgggacactggttaaggataataaaaagggaaactatatgttaattattgcattaaaaattgtttaattaatccataaat 22225831  T
Q  231 aagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    ||||||||||||||||||||||||||||||||||||    
T  22225830 aagtcaacaaaacttccttttatgataaaaatttcc 22225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 153 - 317
Target Start/End: Complemental strand, 28120069 - 28119905
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28120069 gggcaccggttaaggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcctttta 28119970  T
Q  253 tgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    || ||| |||||||       ||||||||||||| |||||| | | |||||||||||||||||||    
T  28119969 tggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccct 28119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 133 - 264
Target Start/End: Original strand, 34151124 - 34151255
Alignment:
Q  133 aaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataa 232  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34151124 aaatgctaaccgatgccccggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattgaaaattgtttaattaatccataaataa 34151223  T
Q  233 gtcaacaaaacttccttttatgataaaaattt 264  Q
    ||||||||||||| |||||||| ||| |||||    
T  34151224 gtcaacaaaactttcttttatggtaagaattt 34151255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 55594131 - 55594262
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||     
T  55594131 gggaaatgctaaccggtgcctcggggcactggttaaggataataaaaaggaaaattatatgttaattattgcattaaaaattgtttaattaatccataag 55594230  T
Q  230 taagtcaacaaaacttccttttatgataaaaa 261  Q
    ||||||||||||||||||||||||| ||||||    
T  55594231 taagtcaacaaaacttccttttatggtaaaaa 55594262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 130 - 326
Target Start/End: Complemental strand, 10110188 - 10109991
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattg--aaaattgtttaattaatctat 226  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  10110188 gggaaatgctaaccggtgcctccgggacactgattaaggataataaaaagggaaattatatgttaattattgcattgaaaaaattgtttaattaatctat 10110089  T
Q  227 aaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttattatatt 326  Q
    ||||||||||||||||||| |||||||| ||| ||| | |       ||||||||||||  |||||  ||||||||||||||||| ||| ||||| ||||    
T  10110088 aaataagtcaacaaaactttcttttatggtaagaatcttctttttttgtatgcttaacccgtgccc--ggggcaccggttagcatcacctttattttatt 10109991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 130 - 320
Target Start/End: Original strand, 292114 - 292305
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| | ||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  292114 gggaaatgctaaccggtgccccgggggcaccggttaaggataataaaaagaaaaattatatgttaattattgcattgaaaattgtttaattaatccataa 292213  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttat 320  Q
    |||||||||| ||||||||||||||| |||||||||||       | ||||||||||  |||||| | |||||||||||||| || ||||||    
T  292214 ataagtcaaccaaacttccttttatggtaaaaatttcctttttttgcatgcttaacccgtgccccggaggcaccggttagcacgatccttat 292305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 130 - 317
Target Start/End: Complemental strand, 37402939 - 37402758
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||||| |||  |||| ||||||||| ||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||||    
T  37402939 gggaaatgctaaccggtgctcccggacactggttacggataataaaaagggaaattatatgttaattatta-----aaaattgtttaattaatccataaa 37402845  T
Q  230 taagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||||||||||||||||||||||| ||| |||||||       ||||||||||||| ||||||  ||||||||||||||||||||||    
T  37402844 taagtcaacaaaacttccttttatggtaagaatttcc-ttttttgtatgcttaaccagtgccccgagggcaccggttagcatgaccct 37402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 169 - 264
Target Start/End: Complemental strand, 6493846 - 6493751
Alignment:
Q  169 taataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaaattt 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  6493846 taataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttccttttatggtaagaattt 6493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 128 - 318
Target Start/End: Complemental strand, 8749987 - 8749794
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||||| |||  | ||||||||| ||||| || |||||| | ||||| |||  |||||||| ||||||||||||| |||||||||||||    
T  8749987 atgggaaatgctaaccggtgctccggggcactggctaaggttactaaaaaagaaaattttataataattattacattgaaaattgtgtaattaatctata 8749888  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttcc---nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||||||||||||||  || || ||||| ||| || ||||          ||||||||||||  ||||||| |||||||||||||||||||||||    
T  8749887 aataagtcaacaaagttttctattatggtaataaattccttttttttttgtatgcttaacccgtgccccaagggcaccggttagcatgaccctt 8749794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 47092657 - 47092719
Alignment:
Q  204 tgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  47092657 tgaaaattgtttgattaatccataaataagtcaacaaaacttcattttatgataaaaatttcc 47092719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 32217042 - 32217232
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||| | |||| ||||| ||||||||||||||| |||||| |||||||||||  || ||| |||||||||| |||| |||||||| ||    
T  32217042 tatgggaaatgctaactggtgcccccggggcactggttaaggata-taaaaaaggaaattatatagtagttaatgcattgaaa-ttgtgtaattaattta 32217139  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||  ||||||| || | ||  ||||||||||| |||| ||       ||||||||||||  |||||| | ||||||||||| || |||||||    
T  32217140 taataaagtcaaaaacagttttttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacaggaccctt 32217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 28120147 - 28120058
Alignment:
Q  218 ttaatctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggtta 307  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||       ||||||||||||  |||||| |||||||||||||    
T  28120147 ttaatccataaataagtcaacaaaacttccttttatggtaagaatttcctttttttgtatgcttaacctgtgccccgggggcaccggtta 28120058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 316
Target Start/End: Original strand, 54897307 - 54897494
Alignment:
Q  129 tgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| || ||||||||||||||||| || | || |||||||||||  || ||| ||||||| ||||||| |||||||| ||||    
T  54897307 tgggaaatgctaaccggtgcccccggggcactggttaaggat-atgagaaaggaaattatatagtagttaatgcattg-aaattgtataattaatttata 54897404  T
Q  228 aataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |  ||||||| || || ||||||||||| ||| |||||||       ||||| ||||||| || ||| | |||||||||||||| |||||    
T  54897405 ataaagtcaaaaacaatttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggaccc 54897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 322
Target Start/End: Original strand, 29591179 - 29591381
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    ||||||| | ||||||||||||| | |||| ||||| ||||||||||| |||  || |||| |||||||||  || ||| |||||||||| |||| || |    
T  29591179 attattaaaagggaaatgctaactggtgcccccggggcactggttaagaatatgaataagg-aaattatatagtagttaatgcattgaaa-ttgtgtact 29591276  T
Q  219 taatctataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    |||| |||||  ||||||| || | || ||||||||| ||| |||| ||       ||||||||||| | |||||| |||||||||||||||| ||||||    
T  29591277 taatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggaccct 29591376  T
Q  318 tatta 322  Q
    |||||    
T  29591377 tatta 29591381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 43944507 - 43944692
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||||||||||||| | || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  43944507 gggaaatgctaaccggtgcctccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 43944604  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      | ||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| ||||| | ||||||||||||||| |||||    
T  43944605 taatgtcaaaaacagtttccttttatggtaataattcccttgtatggtatgcttaaccagtgcccga-gggcaccggttagcaagaccc 43944692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 32202676 - 32202533
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    |||||| ||||||||||| |||||| || | ||||| ||| ||||||||||| |||||| |||||||||||  || ||| ||||||| ||||||| ||||    
T  32202676 attattttatgggaaatgttaaccggtgtccccggggcacgggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaat 32202579  T
Q  219 taatctataaataagtcaacaa-aacttccttttatgataaaaatt 263  Q
    |||| |||||  ||||||| || |  ||||||||||||||| ||||    
T  32202578 taatttataataaagtcaaaaacagtttccttttatgataataatt 32202533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 9964720 - 9964820
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||| ||||  | ||| |||||||| |||||||||||  ||||||  |||||||||| |||||||||||||||||| || | ||||| ||| ||||    
T  9964720 tgggaaatactaagtgttgcttccgggcagtggttaaggatgttaaaaatagaaattatatattaattattgcattgaaatttttgtaattgatcaataa 9964819  T
Q  229 a 229  Q
    |    
T  9964820 a 9964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 28755620 - 28755711
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    |||||||||||||||| || | | ||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  28755620 tgggaaatgctaaccggtgtcccagggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 28755711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 16820966 - 16821039
Alignment:
Q  244 ttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||||||||| ||| |||||||       ||||||||||||| |||||| |||||||||||||||| ||||||    
T  16820966 ttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 16821039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 42898908 - 42898826
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaa 237  Q
    ||||||||||||||||| ||||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  |||||||    
T  42898908 gggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataataaagtcaa 42898826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 4089286 - 4089333
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    ||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  4089286 gtatgtttaaccagtgccccaggggcaccagttagcaggacccttatt 4089333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 16536192 - 16536239
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |||| |||||||| |||||| |||||||||||||||| ||||||||||    
T  16536192 gtattcttaaccagtgccccgggggcaccggttagcaggacccttatt 16536239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 20654691 - 20654774
Alignment:
Q  146 tgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||| |||||| | |||| |||| |||||| ||||||||||   ||  |||||||||||||||||| ||||||||| |||||    
T  20654691 tgcctcggggcaccgtttaatgatactaaaaaaggaaattatagagtagctattgcattgaaaattgtgtaattaatcaataaa 20654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 24142307 - 24142268
Alignment:
Q  180 gaaattatatgttaattattgcattgaaaattgtttaatt 219  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  24142307 gaaattatatagtaattattgcattgaaaattgtttaatt 24142268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 43202569 - 43202472
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| || ||||||| ||||||| | || |||| |||||||||||  |||||| |||||| |||||||| |||||||| |||||    
T  43202569 gggaaatgctaaccggtgcccccggggcactagttaagggt-atgaaaaaggaaattatatagtaattaatgcatt-aaaattgtgtaattaatttataa 43202472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 54054673 - 54054720
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    ||||||||||||| |||||| |||||||||||| ||| ||||||||||    
T  54054673 gtatgcttaaccagtgccccgggggcaccggttggcaggacccttatt 54054720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 19503289 - 19503185
Alignment:
Q  131 ggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    |||||||||||||| |||  ||||| ||||||||||||| || |||| |||||||||||  || ||| | ||||| ||||||| |||||||| |||||      
T  19503289 ggaaatgctaaccggtgctcccgggtactggttaaggat-atgaaaaaggaaattatatactagttaatacattg-aaattgtgtaattaatttataata 19503192  T
Q  231 aagtcaa 237  Q
    |||||||    
T  19503191 aagtcaa 19503185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 24679827 - 24679731
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| || ||| ||||||||||||||||| || ||||  ||||||||||  || ||| || |||| ||||||| |||||||| |||||    
T  24679827 gggaaatgctaaccggtgtctcggggcactggttaaggat-atgaaaaaagaaattatatagtagttaatgtattg-aaattgtgtaattaatttataa 24679731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 18068065 - 18067974
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||||||| ||||||||    
T  18068065 gggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 18067974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 55882684 - 55882789
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| || |||| ||||||| ||||||||||  |||||   |||||||||  |||||| ||||||| ||||||| |||||||| |||||    
T  55882684 gggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa--aaaattatatagtaattaatgcattg-aaattgtgtaattaatttataa 55882780  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  55882781 taaagtcaa 55882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 3783690 - 3783596
Alignment:
Q  127 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    |||||||||||||||||| ||||||| |||||| ||||||  || || ||||  ||||||||||  || ||| |||||| |||||||||||||||||    
T  3783690 tatgggaaatgctaaccggtgcctccggggcaccggttaaacat-atgaaaaatgaaattatatagtagttaatgcatt-aaaattgtttaattaat 3783596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 3999546 - 3999451
Alignment:
Q  155 gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttt 251  Q
    |||| |||||| |||| |||||| |||||||| ||  || || |||||||||||||||| |||| |||| ||||| ||||||| |||  ||||||||    
T  3999546 gcaccggttaatgatactaaaaaaggaaattacatagtagttgttgcattgaaaattgtgtaataaatccataaa-aagtcaaaaaagtttcctttt 3999451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 36395243 - 36395291
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    ||||||||||||| |||||  |||||||| ||||||| |||||||||||    
T  36395243 gtatgcttaaccagtgccctgggggcaccagttagcaggacccttatta 36395291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 54656038 - 54655956
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaa 237  Q
    ||||||||||||||||| ||||||| |||||||||||  || ||| || |||| ||||||| |||||||| |||||  |||||||    
T  54656038 gggcactggttaaggat-ataaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttataataaagtcaa 54655956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 5e-57; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 132 - 321
Target Start/End: Original strand, 26269987 - 26270175
Alignment:
Q  132 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26269987 gaaatgctaaccggtgcccccgggcactggtta-ggataataaaaagagaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 26270085  T
Q  232 agtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    ||||||||||||||||||||||| ||||||||||         ||||||||||   |||||| | |||||||||||||||||||| ||||    
T  26270086 agtcaacaaaacttccttttatggtaaaaatttcttttttttatatgcttaacaggtgccccggaggcaccggttagcatgacccatatt 26270175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 31782755 - 31782565
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||| |||||||||||| || | ||||| ||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |    
T  31782755 tatggaaaatgctaaccggtgtccccggggcacggattaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaatcca 31782656  T
Q  226 taaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    ||||||||||||||||||||| ||||||| |||||||||||       ||||||||||||  |||| | ||||||||||||||||||||||    
T  31782655 taaataagtcaacaaaacttctttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 31782565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 130 - 265
Target Start/End: Complemental strand, 5282440 - 5282304
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||| |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5282440 gggaaatactaatcgatgcctccgggacactgattaaggataataaaaggggaaattatatgttaattattgcattgaaaattgtttaattaatccataa 5282341  T
Q  229 ataagtcaacaaaacttccttttatgataaaaatttc 265  Q
    ||||||||| |||||||||||||||| ||| ||||||    
T  5282340 ataagtcaaaaaaacttccttttatggtaagaatttc 5282304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 15135907 - 15135772
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggc-actggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15135907 tgggaaatgctaaccaatgcctccggggtactg-ttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatccata 15135809  T
Q  228 aataagtcaacaaaacttccttttatgataaaaattt 264  Q
    ||||||||||||||||||  ||||||| ||| |||||    
T  15135808 aataagtcaacaaaacttttttttatggtaataattt 15135772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 45261903 - 45262096
Alignment:
Q  130 gggaaatgctaaccgatgcctcc--gggcactggttaaggataataaaaagggaaatta---tatgttaattattgcattgaaaattgtttaatta--at 222  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||  ||    
T  45261903 gggaaatgctaaccggtgccccccagggcactggttaaggataataaaaagggaaattattatatgttaattattgcattgaaaattgtttaattaccat 45262002  T
Q  223 ctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||| |||||||||||||||||||||||||| ||| ||||||        |||||||||||| ||| ||| ||||||||||||||||||||||    
T  45262003 aaatatataagtcaacaaaacttccttttatggtaataatttcttttttttgtatgcttaacctttgtcccgggggcaccggttagcatgaccc 45262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 29771417 - 29771550
Alignment:
Q  131 ggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||| |||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaaggataataaaaaaggaaattatatgttaattattacattgaaaatt-attaattaatccataaa 29771515  T
Q  230 taagtcaacaaaacttccttttatgataaaaattt 264  Q
    ||||||||||||||||||||||||  |||||||||    
T  29771516 taagtcaacaaaacttccttttatagtaaaaattt 29771550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 153 - 266
Target Start/End: Complemental strand, 44854502 - 44854390
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44854502 gggcactggttaaggataataaaaagg-aaattatatgttaattattgcattgaaaattgtttaattaatccataaataagtcaacaaaacttcatttta 44854404  T
Q  253 tgataaaaatttcc 266  Q
    || ||| |||||||    
T  44854403 tggtaataatttcc 44854390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 28012143 - 28012005
Alignment:
Q  127 tatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||| |||||| |||| | ||  |||||||||||||| |||||||| |||||||||  ||||||||||||| ||||||||  |||||||||||    
T  28012143 tatgggaaatgataaccggtgccccgggatactggttaaggatattaaaaaggaaaattatatagtaattattgcattcaaaattgtggaattaatctat 28012044  T
Q  227 aaataagtcaacaaaacttccttttatgataaaaatttc 265  Q
    |||||||||||||||  ||| ||||||||||| ||||||    
T  28012043 aaataagtcaacaaagtttctttttatgataagaatttc 28012005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 153 - 292
Target Start/End: Original strand, 28178425 - 28178564
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttta 252  Q
    |||||| | |||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  28178425 gggcacggattaaggataataaaaagaaaaattatatattaattattacattgaaaattgtttaattaatccataaataagtcaacaaaactttctttta 28178524  T
Q  253 tgataaaaatttccnnnnnnngtatgcttaaccattgccc 292  Q
    || | | |||||||       ||||||||||||| |||||    
T  28178525 tggttagaatttcctttatttgtatgcttaaccagtgccc 28178564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 44854298 - 44854388
Alignment:
Q  118 atattattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaa 209  Q
    |||||||| | |||||||||||||||| |||| |||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  44854298 atattattttttgggaaatgctaaccggtgcccccgggtcctggttaaggataataaaaa-ggaaattatatattaattattgcattgaaaa 44854388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 129 - 321
Target Start/End: Original strand, 20552930 - 20553122
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| | ||| |||||||||||||||  ||||||| |||||||||  |||||| |||||||||| |||| ||||||||  |||    
T  20552930 tgggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaagg-aaattatatagtaattaatgcattgaaa-ttgtgtaattaattgata 20553027  T
Q  228 aataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |  ||||||| || | || ||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  20553028 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccttatt 20553122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 321
Target Start/End: Original strand, 31438645 - 31438837
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||  ||||| |||||||||||||||  ||||||| ||||||||   || ||| |||||||||| |||| |||||||| ||||    
T  31438645 tgggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaagg-aaattatacagtagttaatgcattgaaa-ttgtgtaattaatttata 31438742  T
Q  228 aataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatt 321  Q
    |  ||||||| || | || ||||||||||||| |||| ||       ||||||||||||| |||||| ||| |||||||||||| ||||||||||    
T  31438743 ataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcaggacccttatt 31438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 116 - 319
Target Start/End: Complemental strand, 3668312 - 3668110
Alignment:
Q  116 caatattattatatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgttt 215  Q
    |||||||| | ||||| |||||||||||| |||| |||| |||||||||||| | ||  ||| |||||||||||  || ||| ||||||| ||||||| |    
T  3668312 caatattactttatggaaaatgctaaccggtgcccccggacactggttaagggt-atggaaaaggaaattatatagtagttaatgcattg-aaattgtgt 3668215  T
Q  216 aattaatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgac 314  Q
    ||||||| |||||  | ||||| || |  ||||||||||| ||| |||||||       ||||| ||||||| ||||||  ||||||||||||||| |||    
T  3668214 aattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatagtatgtttaaccagtgccccgagggcaccggttagcaagac 3668115  T
Q  315 cctta 319  Q
    |||||    
T  3668114 cctta 3668110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 30486210 - 30486396
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||| ||||| |||||||||||||||  ||||||| |||||||||  || ||| || ||||||| |||| ||||||| ||||||    
T  30486210 gggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaagg-aaattatatagtagttaatgtattgaaa-ttgtgtaattaaactataa 30486307  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||||||| || | || ||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| |||||    
T  30486308 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 30486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 26891849 - 26891743
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| ||||| ||||||||| |||||| ||||||||||| ||| ||| ||||||| ||||||| |||||||| |||||    
T  26891849 gggaaatgctaaccggtgcccccgggacactgattaaggata-taaaaaaggaaattatatattagttaatgcattg-aaattgtgtaattaatttataa 26891752  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  26891751 taaagtcaa 26891743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 125 - 324
Target Start/End: Complemental strand, 27856587 - 27856388
Alignment:
Q  125 tatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatc 223  Q
    |||| |||||||| |||||| |||| ||||| |||||||||||  ||  ||||||| |||||||||  || ||| |||||||||| |||| ||||||||     
T  27856587 tataagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaagg-aaattatataatagttaatgcattgaaa-ttgtgtaattaatt 27856490  T
Q  224 tataaataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    |||||  | ||||| || | || ||||||||| ||| |||||||       ||||||||||||| |||||| |||||| ||||||||| ||||||| |||    
T  27856489 tataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggacccttctta 27856390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 30834545 - 30834456
Alignment:
Q  133 aaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    |||||||||||  |||||| ||||||  |||||||||  |||||| |||||||||||  || ||||||||||||||| ||| ||||||||    
T  30834545 aaatgctaaccagtgcctctgggcacaagttaaggatgctaaaaaaggaaattatataatagttattgcattgaaaactgtgtaattaat 30834456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 44331839 - 44331896
Alignment:
Q  197 attgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||||||||||| |||| ||||||||  |||||||||||||||||| |||||||||||    
T  44331839 attgcattgaaacttgtgtaattaattcataaataagtcaacaaaatttccttttatg 44331896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 561704 - 561598
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  561704 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 561607  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  561606 taaagtcaa 561598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 316
Target Start/End: Original strand, 44587901 - 44588088
Alignment:
Q  129 tgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| |||| || |||||| |||||||||| ||||||| |||||||||||  || ||| | ||||| ||||||| |||||||| ||||    
T  44587901 tgggaaatgctaaccggtgcccccggggcaccggttaaggat-ataaaaaaggaaattatatagtagttaatacattg-aaattgtgtaattaatttata 44587998  T
Q  228 aataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |  |||| || || |  ||||||||||| ||| |||| ||       ||||||||||| | |||||| |||| ||||||||||| |||||    
T  44587999 ataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 3336505 - 3336412
Alignment:
Q  159 tggttaaggataataaaaagggaaattatatgt--taattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttcctttt 251  Q
    |||||||||| | |||||| | |||||||||||  || | ||||||||||||||||| ||||||||| ||||| ||||||| |||| ||||||||    
T  3336505 tggttaaggacactaaaaaagaaaattatatgtaatagtaattgcattgaaaattgtataattaatccataaa-aagtcaaaaaaaattcctttt 3336412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 16807409 - 16807318
Alignment:
Q  132 gaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||| |||||||| |||| |||||||||||  | |||| | |||||||||  || ||||||||||||||| ||| ||||||||    
T  16807409 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaaactgtgtaattaat 16807318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 16846690 - 16846599
Alignment:
Q  132 gaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||| |||||||| |||| |||||||||||  | |||| | |||||||||  || ||||||||||||||| ||| ||||||||    
T  16846690 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttattgcattgaaaactgtgtaattaat 16846599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 22887750 - 22887936
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||||||||||| ||||| ||||||||||| || ||||  ||||||||||  || ||| ||||||| ||||| | |||||||| |||||    
T  22887750 gggaaatgctaaccgatgcctccggggcagtggttaaggat-atgaaaaaagaaattatatagtagttaatgcattg-aaattatgtaattaatttataa 22887847  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      |||| || || |  ||||||||||| ||| ||||  |       ||||||||||||| ||| || ||||||||| ||||||||||||    
T  22887848 taaagttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatgaccc 22887936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 325
Target Start/End: Complemental strand, 5093726 - 5093531
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||| | |  ||| | ||||| ||||||||||  ||||||| |||||| ||  || ||| |||||| |||||||| |||||||| ||||    
T  5093726 atgggaaatgctaactggtttctcggagcactagttaaggatatgaaaaagg-aaattaaatagtagttaatgcatt-aaaattgtgtaattaatttata 5093629  T
Q  228 aataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttattatat 325  Q
    |  ||||||| |  || ||||||||||||||| |||||||       ||||| ||||| | |||||| ||||||||||||| || ||||||| ||||||    
T  5093628 ataaagtcaaaagcaatttccttttatgataataatttccttttatggtatgtttaactagtgcccc-ggggcaccggttaacaggaccctttttatat 5093531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 44331763 - 44331840
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaat 230  Q
    ||||||| ||||||| || ||||||  ||| ||||||  ||||||||||||||||| |||| ||||||||| ||||||    
T  44331763 gggcactagttaaggttactaaaaaaagaatttatatagtaattattgcattgaaacttgtgtaattaatccataaat 44331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 319
Target Start/End: Original strand, 22567629 - 22567791
Alignment:
Q  156 cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaa-aacttccttttatg 254  Q
    |||||||||||||||  ||||| | |||||||||  || ||| || ||||||| |||| |||||||| |||||  ||||||| || || |||||||||||    
T  22567629 cactggttaaggatatgaaaaaag-aaattatatagtagttaatgtattgaaa-ttgtgtaattaatttataataaagtcaaaaataatttccttttatg 22567726  T
Q  255 ataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
     ||| ||||  |       ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  22567727 gtaataattctcttttatggtatgcttaacccgtgctccaggggcaccggttagcaggaccctta 22567791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 32361055 - 32360869
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| ||||||||||||||   ||||||  |||||||||  || ||| |||||||||| |  | ||||||||  ||||    
T  32361055 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaaga-aaattatataatagttaatgcattgaaa-taatataattaattgataa 32360958  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||||||| || | || ||||||||| ||| |||| ||       ||||||||||||| |||||| |||||||||||||||| |||||    
T  32360957 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 32360869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 266
Target Start/End: Original strand, 43637163 - 43637300
Alignment:
Q  128 atgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||||||||||| |||| |  | |||||||||||||| || || | |||||||||||  || ||| ||||||| ||||||| |||||||| ||||    
T  43637163 atgggaaatgctaaccggtgccccgagacactggttaaggat-atgaataaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttata 43637260  T
Q  228 aataagtcaacaa-aacttccttttatgataaaaatttcc 266  Q
    |  ||||||| || || ||| ||||||| ||| |||||||    
T  43637261 ataaagtcaaaaacaatttctttttatggtaataatttcc 43637300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 266
Target Start/End: Original strand, 20252740 - 20252877
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat-ctata 227  Q
    ||||||||||||| | |||||||| | |||||||||| |||   || || |||||||||||  || ||||||||||||||| ||| |||||||| ||| |    
T  20252740 gggaaatgctaactggtgcctccgtgacactggttaaagatgtcaagaaaggaaattatattgtagttattgcattgaaaactgtgtaattaatacta-a 20252838  T
Q  228 aataagtcaacaaaacttccttttatgataaaaatttcc 266  Q
    || || |||| || | || |||||||||||| |||||||    
T  20252839 aaaaaatcaaaaatattttcttttatgataataatttcc 20252877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 29771568 - 29771609
Alignment:
Q  275 tatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
    |||| ||||||  |||||||||||||||||||||||||||||    
T  29771568 tatgtttaacccgtgccccaggggcaccggttagcatgaccc 29771609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 5358584 - 5358656
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||| || |||| |||| |||||| | |||||||||  || ||||| ||||||||||||| |||||||||||    
T  5358584 gggcaatgattaatgatactaaaaatgtaaattatataatagttattacattgaaaattgtgtaattaatcta 5358656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 32860126 - 32860208
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaa 237  Q
    |||||| ||||||||||| |||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  |||||||    
T  32860126 gggcacgggttaaggata-taaaaaaggaaattatatagtatttaatgcattg-aaattgtgtaattaatttataataaagtcaa 32860208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 38296177 - 38296283
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||||||||||| || ||  ||||||||||||| ||| || |||| | |||||||||  |||||| | ||||| ||||||| |||||||| |||||    
T  38296177 tgggaaatgctaaccggtgtcttggggcactggttaaagat-atgaaaaagaaaattatatagtaattaatacattg-aaattgtgtaattaatttataa 38296274  T
Q  229 ataagtcaa 237  Q
      |||||||    
T  38296275 taaagtcaa 38296283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 39531967 - 39532015
Alignment:
Q  275 tatgcttaaccattgccccaggggcaccggttagcatgacccttattat 323  Q
    |||||||||||| || | ||| |||||||||||||||||||| ||||||    
T  39531967 tatgcttaaccagtgtctcagaggcaccggttagcatgacccatattat 39532015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 132 - 318
Target Start/End: Complemental strand, 509173 - 508985
Alignment:
Q  132 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaata 231  Q
    ||||||||||||| |||| ||||  | | ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  509173 gaaatgctaaccggtgcccccggatattagttaaggataataaaaatggaaattatatgttaattattgaattgaaaattgtttaattaattcataaata 509074  T
Q  232 agtcaacaaaacttccttttatgataaaaatttcc--nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||||||||||||| |||||||| |||||||||||         |||||||||| |  |||||| | ||||||||||||||||||||||    
T  509073 agtcaacaaaactttcttttatggtaaaaatttcctttttttttgtatgcttaaacggtgccccggaggcaccggttagcatgaccctt 508985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 161 - 322
Target Start/End: Complemental strand, 51665870 - 51665709
Alignment:
Q  161 gttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatgataaaa 260  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||| ||| |    
T  51665870 gttaaggataataaaaagagaaattatatattaattattgcattgaaaattgtttaattaattcataaataagtcaacgaaacttcattttatggtaaga 51665771  T
Q  261 atttcc-nnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
    ||||||        ||||||||||||  |||||| ||| ||||||||||||||||||| ||||    
T  51665770 atttccttttttctgtatgcttaacccgtgcccc-gggacaccggttagcatgaccctaatta 51665709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 53163792 - 53163888
Alignment:
Q  158 ctggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  53163792 ctggttaaggataataaatagggaaattatatgttaattactggattgaaaattgtttaattaatccataaataagtcaacaaaactttcttttatg 53163888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 119 - 326
Target Start/End: Original strand, 39074408 - 39074614
Alignment:
Q  119 tattattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaa 217  Q
    |||||| ||||||||||||||||||| |||| ||||| |||||||||||| ||  ||||||| |||||||||  || ||| |||||||||| |||| |||    
T  39074408 tattataatatgggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtgtaa 39074505  T
Q  218 ttaatctataaataagtcaacaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||| |||||  | ||||| | |  ||||||||||| ||| |||| ||       ||||||||||||| ||||||||||||||||||||||| ||||||    
T  39074506 ttaatttataataatgtcaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccct 39074605  T
Q  318 tattatatt 326  Q
    ||| |||||    
T  39074606 tataatatt 39074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 316
Target Start/End: Complemental strand, 10617470 - 10617284
Alignment:
Q  129 tgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||| |||||| |||||||||||  || ||| |||||| |||||||| |||||||| |||||    
T  10617470 tgggaaatgttaaccggtgcccccggacactgattaaggata-taaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaatttataa 10617373  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||||||| || || ||||||||||| ||| |||| ||       ||||||||||||  |||||| |||||||||||||||| |||||    
T  10617372 taaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggaccc 10617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 322
Target Start/End: Original strand, 49893331 - 49893523
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||||||||    
T  49893331 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatataatagttaatgcattg-aaattgtgtaattaatctataa 49893428  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgacccttatta 322  Q
      ||||||| || |  ||||||||||| ||| |||| ||       |||||||||| || |||||| |||||||||||||||  ||||| |||||    
T  49893429 taaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccggacccatatta 49893523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 272220 - 272406
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||    
T  272220 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataa 272317  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      ||||||| || |  ||||||||||| ||| |||| ||       |||||||||| |  |||||| |||||||||||||||| |||||    
T  272318 taaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggaccc 272406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 26966492 - 26966595
Alignment:
Q  126 atatgggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||||||||||| ||||| || | |||   |||| ||||||||| ||||||  ||||||||||  || ||||||||||||||||||||||||||||| |    
T  26966492 atatgggaaatgccaaccggtgtccccgactactgattaaggatactaaaaaaagaaattatatagtagttattgcattgaaaattgtttaattaatcca 26966591  T
Q  226 taaa 229  Q
    ||||    
T  26966592 taaa 26966595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 253
Target Start/End: Original strand, 27643998 - 27644124
Alignment:
Q  127 tatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    ||||| |||||||||||| || |||  ||||||||||||| | || |||||||  |||||||||  |||||||| |||| |||||||| |||||||||      
T  27643998 tatggaaaatgctaaccggtgtctctagggcactggttaaagttactaaaaagt-aaattatatagtaattattacattaaaaattgtgtaattaatcct 27644096  T
Q  226 taaataagtcaacaaaacttccttttat 253  Q
    ||||||||||||||||| || |||||||    
T  27644097 taaataagtcaacaaaattttcttttat 27644124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 326
Target Start/End: Original strand, 43786862 - 43787067
Alignment:
Q  121 ttattatatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaatt 219  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| | | || |||| |||||||||||  || ||| ||||||| ||||||| |||||    
T  43786862 ttattttatgggaaatgctaaccggtgcctccggggcactggttaatggt-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaatt 43786959  T
Q  220 aatctataaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    ||| |||||  |  |||| || |  ||||||||||| ||| ||||          ||||||||||||| |||||| |||||||||||||||| |||||||    
T  43786960 aatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctt 43787059  T
Q  319 attatatt 326  Q
    ||| ||||    
T  43787060 attttatt 43787067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 31436313 - 31436386
Alignment:
Q  181 aaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||||||||  ||||||||||||| |||||||| ||||||||  |||||||||||||||||| || ||||||||    
T  31436313 aaattatatagtaattattgcattaaaaattgtgtaattaattcataaataagtcaacaaaattttcttttatg 31436386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 128 - 319
Target Start/End: Original strand, 4168181 - 4168372
Alignment:
Q  128 atgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctat 226  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| |||||||||||  || ||| || |||| ||||||| |||||||| |||    
T  4168181 atgggaaatgctaaccggtgcctccggggaactggttaaggat-ataaaaaaggaaattatatagtagttaatgtattg-aaattgtgtaattaatttat 4168278  T
Q  227 aaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
    ||  ||||||| || |  || |||||||| ||| ||||  |       ||||||||||||  | |||| |||||||||||||||| ||||||||    
T  4168279 aataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcaggaccctta 4168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 12011681 - 12011741
Alignment:
Q  194 attattgcattgaaaattgtttaattaatctataaataagtcaacaaaacttccttttatg 254  Q
    |||| |||||||||||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  12011681 attagtgcattgaaaattggttaattaattcataaataagtcaacaaaactttcttttatg 12011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 318
Target Start/End: Original strand, 48725268 - 48725459
Alignment:
Q  127 tatgggaaatgctaaccgatgcctc-cgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatcta 225  Q
    |||||||||||||||||| |||| |  ||||||||||||||||| || |||| |||||||||||  |||||| ||||||| ||||||| ||||||||  |    
T  48725268 tatgggaaatgctaaccggtgccccgggggcactggttaaggat-atgaaaaaggaaattatatagtaattaatgcattg-aaattgtgtaattaattga 48725365  T
Q  226 taaataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
    |||  ||||||| || |  ||||||||||| ||| |||| ||       ||||||||||||| |||||| ||  ||| |||||||| |||||||    
T  48725366 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggaccacgggttagcaggaccctt 48725459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 319
Target Start/End: Original strand, 18014672 - 18014861
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||| | |||| ||||| ||||| |||||||||  ||||||  |||||||||  || ||| |||||||||| |||| ||||||| ||||||    
T  18014672 gggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagt-aaattatatagtagttaatgcattgaaa-ttgtgtaattaaactataa 18014769  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctta 319  Q
      |||| || || | || ||||||||||||| |||||||       |||||||||| || |||||| |||||||| ||||||| ||||||||    
T  18014770 taaagttaaaaacagtttccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagcaagaccctta 18014861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 310
Target Start/End: Original strand, 41304005 - 41304183
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| ||||||| ||||| ||||||||||| || |||| |||||||||||  |||||| ||||||| ||||||  ||||||||  ||||    
T  41304005 gggaaatgctaaccggtgcctccggggcagtggttaaggat-atgaaaaaggaaattatatagtaattaatgcattg-aaattg--taattaattgataa 41304100  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagca 310  Q
      ||||||| || |  ||||||||||| ||| |||||||       ||||||||||||| |||||| | | ||||||||||||    
T  41304101 taaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagca 41304183  T

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Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 52520681 - 52520869
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||| ||  ||||||| |||||||||  || ||| |||||||||| |||| |||||||| |||||    
T  52520681 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtgtaattaatttataa 52520778  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccctt 318  Q
      | ||||| || | || ||||||||| ||| ||||          ||||||||||||| |||||| |||||||||||||||| |||||||    
T  52520779 taatgtcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctt 52520869  T

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Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 17752708 - 17752784
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||||||||||| ||||| || |||| ||||  || ||||||| ||||||||||| |||||||| ||||||    
T  17752708 gggcactggttaaggatactaaaatggtaaatcatatagtatttattgcgttgaaaattgtgtaattaatttataaa 17752784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 19054028 - 19054104
Alignment:
Q  153 gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||||||||||||||| ||||| || |||| ||||  || ||||||| ||||||||||| |||||||| ||||||    
T  19054028 gggcactggttaaggatactaaaatggtaaatcatatagtatttattgcgttgaaaattgtgtaattaatttataaa 19054104  T

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Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 25743842 - 25743902
Alignment:
Q  162 ttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||| |||||| |||||||||||  ||||||||||||| |||||||| ||||||||    
T  25743842 ttaaggatactaaaaaaggaaattatatagtaattattgcattaaaaattgtgtaattaat 25743902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 241
Target Start/End: Complemental strand, 34300800 - 34300689
Alignment:
Q  130 gggaaatgctaaccgatgcctccg-ggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    |||||||| ||||||||| ||||  ||||||||||||||||||||||||  |||||||||   || ||||| |||||||| |||| |||| |||  ||||    
T  34300800 gggaaatgttaaccgatgtctccaaggcactggttaaggataataaaaaatgaaattatacagtagttattacattgaaagttgtgtaatcaattcataa 34300701  T
Q  229 ataagtcaacaaa 241  Q
    | |||||||||||    
T  34300700 a-aagtcaacaaa 34300689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 40614462 - 40614522
Alignment:
Q  162 ttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||| ||||||||||||||||||  || ||||||||||||||||||| ||| ||||    
T  40614462 ttaaggatactaaaaagggaaattatatagtagttattgcattgaaaattgtgtaactaat 40614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 27994487 - 27994387
Alignment:
Q  129 tgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||| ||||||  |||||| |||  |||||| || | |||||||| | ||||||||| |||    
T  27994487 tgggaaatgttaaccgatgcccccggggcactggttaaggatactaaaaa-agaaattttatagtaattaatgtagtgaaaattatgtaattaatccata 27994389  T
Q  228 aa 229  Q
    ||    
T  27994388 aa 27994387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 309
Target Start/End: Original strand, 858589 - 858768
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||| ||||| |||| || | ||||| ||||||||||  ||||||| |||||||||  || ||| |||||||||| |||| ||||||||  ||||    
T  858589 gggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaagg-aaattatatagtagttaatgcattgaaa-ttgtgtaattaattgataa 858686  T
Q  229 ataagtcaacaaaactt-ccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagc 309  Q
      ||||||| || | || ||||||||| ||| |||||||       ||||||||||||  |||||| |||||||||||||||    
T  858687 taaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaacccgtgccccgggggcaccggttagc 858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 13899075 - 13898979
Alignment:
Q  133 aaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||| |||||||||||  |||  ||||||||| |||  |||||| | |||||||||  ||||||||| |||||||||| | ||||||||| |||||    
T  13899075 aaatgttaaccgatgccctcggatactggttaaagatgctaaaaaagaaaattatatagtaattattgtattgaaaattttgtaattaatccataaa 13898979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 11308253 - 11308210
Alignment:
Q  274 gtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||    
T  11308253 gtatgcttaaccaatgccccaggggcaccgattagcaggaccct 11308210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 46352634 - 46352820
Alignment:
Q  130 gggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| ||||| |||||||||||||| || |||| ||||||||||   || ||| ||||||| ||||||| ||||||||  ||||    
T  46352634 gggaaatgctaaccggtgcccccggggcactggttaaggat-atgaaaaaggaaattatacagtagttaatgcattg-aaattgtgtaattaattgataa 46352731  T
Q  229 ataagtca-acaaaacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccc 316  Q
      |||||| | | |  ||||||||||| ||| |||| ||       ||||||||||||  |||||| | |||||||||||||| |||||    
T  46352732 taaagtcagaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 46352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 52246581 - 52246688
Alignment:
Q  129 tgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||| | ||||||| ||||||||||||||||| || ||||  ||||||||||  |  ||| ||||||| ||||||| |||||||| ||||    
T  52246581 tgggaaatgctaactggtgcctccggggcactggttaaggat-atgaaaaatgaaattatatagttgttaatgcattg-aaattgtataattaatttata 52246678  T
Q  228 aataagtcaa 237  Q
    |  |||||||    
T  52246679 ataaagtcaa 52246688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 20923991 - 20924089
Alignment:
Q  129 tgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctata 227  Q
    |||||||||||||||| ||| ||| ||||||||||||||| | || |||| |||||||||||  || ||| | ||||| ||||||| |||||||| ||||    
T  20923991 tgggaaatgctaaccggtgcttccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaattcattg-aaattgtgtaattaatttata 20924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 41554122 - 41554020
Alignment:
Q  133 aaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataa 232  Q
    |||||||||| | |||| | | ||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  ||    
T  41554122 aaatgctaactggtgccccggtgcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaatttataataaa 41554025  T
Q  233 gtcaa 237  Q
    |||||    
T  41554024 gtcaa 41554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 51819064 - 51819012
Alignment:
Q  127 tatgggaaatgctaaccgatgcctc-cgggcactggttaaggataataaaaag 178  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||| |||||||    
T  51819064 tatgggaaatgctaactgatgcctctggggcactgattaaggatactaaaaag 51819012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 317
Target Start/End: Original strand, 22961 - 23148
Alignment:
Q  130 gggaaatgctaaccgatgcctccgg-gcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataa 228  Q
    ||||||||||||||| |||| |||| ||||||||||||||| || |||| |||||||||||  |||||| | ||||| ||||||| |||||||| |||||    
T  22961 gggaaatgctaaccggtgcccccggagcactggttaaggat-atgaaaaaggaaattatatagtaattaatacattg-aaattgtgtaattaatttataa 23058  T
Q  229 ataagtcaacaa-aacttccttttatgataaaaatttccnnnnnnngtatgcttaaccattgccccaggggcaccggttagcatgaccct 317  Q
      ||||||| || |  ||||||||||| ||| ||||  |       ||||| ||||||| ||||||| || |||||||||||| ||||||    
T  23059 taaagtcaaaaacagtttccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagcaagaccct 23148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 11154 - 11050
Alignment:
Q  130 gggaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    ||||||||||||| | |||| |||| |||||||||||||||  ||||||| ||||||||| ||| ||| ||||||| ||||||| ||||||| ||||||     
T  11154 gggaaatgctaactggtgcc-ccggacactggttaaggatatgaaaaagg-aaattatatattagttaatgcattg-aaattgtgtaattaaactataat 11058  T
Q  230 taagtcaa 237  Q
     |||||||    
T  11057 aaagtcaa 11050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 25709 - 25824
Alignment:
Q  120 attattatatgggaaatgctaaccgatgcctccggg-cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaat 218  Q
    ||||||||||||||||||||||| | |||||| |||  || |||||||||||  |||||||  ||||||||  |||||| || |||| ||||||| ||||    
T  25709 attattatatgggaaatgctaactggtgcctctgggatacgggttaaggatatgaaaaagg--aattatatagtaattaatgtattg-aaattgtgtaat 25805  T
Q  219 taatctataaataagtcaa 237  Q
    |||| |||||  |||||||    
T  25806 taatttataataaagtcaa 25824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 8067 - 7992
Alignment:
Q  145 atgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||| ||||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  8067 atgcccccgggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 7992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 7304 - 7379
Alignment:
Q  145 atgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||| ||||||||||||||||||| || |||| |||||||||||  || ||| ||||||| ||||||| ||||||||    
T  7304 atgcccccgggcactggttaaggat-atgaaaaaggaaattatatagtagttaatgcattg-aaattgtgtaattaat 7379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 53505 - 53426
Alignment:
Q  156 cactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaataagtcaa 237  Q
    ||||||||||||||| |||||| |||||||||||  || ||| ||||||| ||||||| |||||||| |||||  |||||||    
T  53505 cactggttaaggata-taaaaaaggaaattatatagtagttaatgcattg-aaattgtataattaatttataataaagtcaa 53426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 50544 - 50607
Alignment:
Q  126 atatgggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatat 189  Q
    |||||||||||| |||||| ||||||| ||||||||||||| ||| || |||| |||||||||||    
T  50544 atatgggaaatgttaaccggtgcctccggggcactggttaaagat-atgaaaaaggaaattatat 50607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 66401 - 66498
Alignment:
Q  132 gaaatgctaaccgatgcctccgggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaatctataaa 229  Q
    |||||| |||||| |  ||||| | ||| ||||||||||  |||||  ||| ||||||  || ||||||||||||||||||| ||||||||| |||||    
T  66401 gaaatgttaaccggtatctccgagtactagttaaggatacgaaaaaatgaagttatataatagttattgcattgaaaattgtgtaattaatccataaa 66498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 53871 - 53780
Alignment:
Q  130 gggaaatgctaaccgatgcctcc-gggcactggttaaggataataaaaagggaaattatatgttaattattgcattgaaaattgtttaattaat 222  Q
    ||||||||||||||| |||| || ||||||||||||||| | || |||| |||||||||||  || ||| |||||| |||||||| ||||||||    
T  53871 gggaaatgctaaccggtgcccccggggcactggttaagggt-atgaaaaaggaaattatatagtagttaatgcatt-aaaattgtgtaattaat 53780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 6259 - 6291
Alignment:
Q  279 cttaaccattgccccaggggcaccggttagcat 311  Q
    |||||||| ||||||||||||||||||||||||    
T  6259 cttaaccagtgccccaggggcaccggttagcat 6291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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