View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11480_low_21 (Length: 292)
Name: NF11480_low_21
Description: NF11480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11480_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 29295857 - 29296108
Alignment:
| Q |
1 |
cgaagagcatatgatatgccgcacaaacactaaataattagtcataattcaactcattcaattnnnnnnnctttaataaagattaattatctacaaatta |
100 |
Q |
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| T |
29295857 |
cgaatagcatatgatatgctgcacaaacactaaataattagtcataattcaactcattaaattaaaaaaactttaataaagattaattatctacaaatta |
29295956 |
T |
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| Q |
101 |
cttaatatttttgcatcaattttaatatttttagcatgtgtgtctttcaaattcaaacagctagcggttttgtttatatatttttatagacaaatgttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |
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| T |
29295957 |
cttaatatttttgcatcaattttaatatttttagcatgtgtgcttttcaaattcaaacagctagcagttttgtttatatatttttatagacaaatgttga |
29296056 |
T |
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| Q |
201 |
tggttaatttgttaagaagagagaaaatcgttaagtaaaagagaacgcatct |
252 |
Q |
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|||||||||||||| |||||||||||||| ||||||||||||||| |||||| |
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| T |
29296057 |
tggttaatttgttaggaagagagaaaatctttaagtaaaagagaatgcatct |
29296108 |
T |
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