View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11480_low_6 (Length: 547)

Name: NF11480_low_6
Description: NF11480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11480_low_6
NF11480_low_6
[»] chr7 (31 HSPs)
chr7 (161-500)||(3042290-3042630)
chr7 (10-120)||(31098952-31099062)
chr7 (1-120)||(5091771-5091890)
chr7 (1-120)||(29955305-29955424)
chr7 (10-120)||(32657526-32657636)
chr7 (1-118)||(3066471-3066587)
chr7 (11-116)||(3061276-3061381)
chr7 (139-260)||(3246465-3246583)
chr7 (139-253)||(10020445-10020559)
chr7 (160-261)||(7162665-7162766)
chr7 (160-258)||(41012577-41012676)
chr7 (139-261)||(7392282-7392404)
chr7 (149-258)||(1513487-1513595)
chr7 (218-267)||(7465457-7465506)
chr7 (137-262)||(35498394-35498518)
chr7 (216-264)||(14772388-14772436)
chr7 (216-264)||(15222840-15222888)
chr7 (139-261)||(29658250-29658371)
chr7 (145-261)||(38363156-38363272)
chr7 (139-266)||(37917384-37917511)
chr7 (145-207)||(42407912-42407972)
chr7 (139-193)||(47355874-47355929)
chr7 (139-189)||(3955021-3955071)
chr7 (218-260)||(8147241-8147283)
chr7 (139-189)||(32814896-32814946)
chr7 (139-188)||(42976576-42976625)
chr7 (139-262)||(11808034-11808158)
chr7 (139-263)||(23470477-23470600)
chr7 (144-264)||(31475823-31475942)
chr7 (218-266)||(32514691-32514739)
chr7 (139-195)||(41000823-41000879)
[»] chr2 (34 HSPs)
chr2 (1-120)||(27999421-27999540)
chr2 (1-120)||(28090155-28090274)
chr2 (1-120)||(28096478-28096597)
chr2 (1-120)||(1918672-1918791)
chr2 (1-120)||(19820496-19820615)
chr2 (1-120)||(19840717-19840836)
chr2 (1-118)||(21590415-21590532)
chr2 (11-120)||(5000613-5000722)
chr2 (11-120)||(5012283-5012392)
chr2 (11-117)||(42110909-42111015)
chr2 (1-120)||(205045-205164)
chr2 (15-120)||(36439432-36439537)
chr2 (139-264)||(39334857-39334982)
chr2 (139-261)||(34107271-34107393)
chr2 (61-120)||(13900800-13900859)
chr2 (139-207)||(32256187-32256255)
chr2 (139-235)||(36413783-36413879)
chr2 (156-206)||(4529756-4529806)
chr2 (150-260)||(14307681-14307791)
chr2 (139-189)||(32677398-32677448)
chr2 (153-207)||(44240080-44240133)
chr2 (139-264)||(25463242-25463367)
chr2 (140-193)||(30737046-30737099)
chr2 (140-235)||(36345158-36345252)
chr2 (146-207)||(32891650-32891709)
chr2 (139-189)||(35352380-35352430)
chr2 (139-261)||(36277679-36277800)
chr2 (139-189)||(38242680-38242730)
chr2 (139-193)||(38581582-38581636)
chr2 (143-188)||(7938095-7938140)
chr2 (160-257)||(41305063-41305160)
chr2 (140-189)||(42507357-42507406)
chr2 (139-187)||(20942085-20942133)
chr2 (139-183)||(40172439-40172483)
[»] chr3 (26 HSPs)
chr3 (1-120)||(857507-857626)
chr3 (1-117)||(11824695-11824811)
chr3 (1-117)||(33005286-33005402)
chr3 (1-120)||(31484349-31484468)
chr3 (1-120)||(36090237-36090356)
chr3 (1-120)||(49565221-49565340)
chr3 (16-120)||(35713878-35713982)
chr3 (1-120)||(43508933-43509052)
chr3 (140-259)||(40160734-40160853)
chr3 (144-261)||(21248971-21249087)
chr3 (139-256)||(33533205-33533322)
chr3 (139-260)||(3461699-3461821)
chr3 (139-255)||(23237365-23237481)
chr3 (139-259)||(24160504-24160624)
chr3 (138-261)||(10959129-10959251)
chr3 (139-186)||(21142709-21142756)
chr3 (139-262)||(31680728-31680850)
chr3 (139-260)||(36331704-36331824)
chr3 (139-189)||(36763500-36763551)
chr3 (139-193)||(4478344-4478398)
chr3 (170-266)||(14868676-14868773)
chr3 (160-261)||(23025894-23025995)
chr3 (140-189)||(47497147-47497196)
chr3 (139-243)||(16999943-17000047)
chr3 (139-207)||(31902182-31902249)
chr3 (179-239)||(39946508-39946567)
[»] chr4 (27 HSPs)
chr4 (1-120)||(42345975-42346094)
chr4 (11-117)||(14147723-14147829)
chr4 (1-120)||(53286503-53286622)
chr4 (139-258)||(20610739-20610858)
chr4 (142-261)||(49039424-49039543)
chr4 (141-253)||(12585537-12585649)
chr4 (139-261)||(54854155-54854277)
chr4 (139-264)||(6202597-6202722)
chr4 (157-260)||(30032812-30032915)
chr4 (10-53)||(29362842-29362885)
chr4 (139-261)||(41492475-41492596)
chr4 (179-264)||(44449483-44449568)
chr4 (160-264)||(27921890-27921994)
chr4 (142-261)||(33359814-33359933)
chr4 (170-264)||(48501665-48501760)
chr4 (139-189)||(9302634-9302684)
chr4 (139-209)||(32887180-32887250)
chr4 (160-258)||(36045830-36045928)
chr4 (191-261)||(38657537-38657607)
chr4 (157-234)||(16336469-16336546)
chr4 (161-206)||(39494185-39494230)
chr4 (178-258)||(56875-56955)
chr4 (139-206)||(21476059-21476124)
chr4 (178-261)||(36008271-36008355)
chr4 (180-248)||(42432018-42432086)
chr4 (139-261)||(48512195-48512316)
chr4 (149-208)||(50657930-50657987)
[»] chr1 (27 HSPs)
chr1 (1-120)||(45506305-45506424)
chr1 (1-120)||(48959304-48959423)
chr1 (10-120)||(26210942-26211052)
chr1 (1-120)||(2051069-2051188)
chr1 (1-120)||(36870328-36870447)
chr1 (4-72)||(13928496-13928564)
chr1 (139-263)||(7015662-7015787)
chr1 (139-253)||(18976008-18976122)
chr1 (158-259)||(43327009-43327110)
chr1 (139-267)||(19866466-19866594)
chr1 (160-257)||(9769577-9769674)
chr1 (139-207)||(33844668-33844736)
chr1 (139-207)||(33949242-33949310)
chr1 (139-261)||(9768785-9768907)
chr1 (151-261)||(18003813-18003923)
chr1 (157-207)||(24889191-24889241)
chr1 (139-259)||(9004345-9004466)
chr1 (150-263)||(26349966-26350078)
chr1 (139-255)||(16182812-16182928)
chr1 (139-261)||(9931084-9931206)
chr1 (218-264)||(47645851-47645897)
chr1 (210-260)||(49632291-49632341)
chr1 (140-261)||(7906303-7906424)
chr1 (139-261)||(9527422-9527543)
chr1 (139-207)||(12553245-12553313)
chr1 (160-256)||(23750152-23750248)
chr1 (139-191)||(34870258-34870309)
[»] chr8 (11 HSPs)
chr8 (11-120)||(409401-409510)
chr8 (1-120)||(18489439-18489558)
chr8 (160-262)||(4954979-4955082)
chr8 (160-266)||(7345420-7345526)
chr8 (216-261)||(24572904-24572949)
chr8 (145-240)||(37288088-37288184)
chr8 (139-258)||(43554449-43554569)
chr8 (139-195)||(37128791-37128845)
chr8 (218-267)||(41793028-41793076)
chr8 (150-207)||(44254299-44254356)
chr8 (139-187)||(39208845-39208893)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-117)||(37172-37288)
[»] chr6 (17 HSPs)
chr6 (1-117)||(29373468-29373584)
chr6 (1-117)||(24457242-24457358)
chr6 (1-117)||(29370913-29371029)
chr6 (1-61)||(33006546-33006606)
chr6 (160-261)||(8175993-8176095)
chr6 (150-261)||(22730688-22730800)
chr6 (168-259)||(7374055-7374146)
chr6 (139-261)||(26669635-26669757)
chr6 (149-260)||(9051277-9051388)
chr6 (141-260)||(30668162-30668281)
chr6 (139-261)||(6455450-6455572)
chr6 (151-261)||(34524872-34524982)
chr6 (218-255)||(1488091-1488128)
chr6 (140-205)||(10443166-10443231)
chr6 (150-262)||(9422829-9422942)
chr6 (170-261)||(14981709-14981801)
chr6 (160-264)||(30905477-30905581)
[»] chr5 (18 HSPs)
chr5 (1-117)||(10038946-10039062)
chr5 (139-261)||(28537132-28537254)
chr5 (144-257)||(38040267-38040379)
chr5 (61-120)||(20108393-20108452)
chr5 (139-261)||(35813219-35813340)
chr5 (142-239)||(40384270-40384367)
chr5 (140-264)||(31280357-31280480)
chr5 (160-255)||(30255315-30255410)
chr5 (142-260)||(11246473-11246591)
chr5 (218-262)||(36742022-36742066)
chr5 (137-240)||(5749985-5750088)
chr5 (140-207)||(14077233-14077300)
chr5 (139-261)||(17557027-17557148)
chr5 (139-189)||(41539383-41539433)
chr5 (140-193)||(37986844-37986897)
chr5 (218-258)||(36116932-36116972)
chr5 (170-261)||(37303930-37304022)
chr5 (142-194)||(38535909-38535960)
[»] scaffold0374 (1 HSPs)
scaffold0374 (1-120)||(899-1018)
[»] scaffold0119 (1 HSPs)
scaffold0119 (139-261)||(1036-1158)
[»] scaffold0168 (1 HSPs)
scaffold0168 (150-261)||(34020-34131)
[»] scaffold0126 (1 HSPs)
scaffold0126 (218-261)||(25016-25059)
[»] scaffold0054 (1 HSPs)
scaffold0054 (150-257)||(67162-67269)
[»] scaffold0079 (1 HSPs)
scaffold0079 (157-234)||(56314-56391)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 161 - 500
Target Start/End: Original strand, 3042290 - 3042630
Alignment:
Q  161 attcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacgg 260  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| ||| || |||||||||| ||| |||||| ||||||||||||||||||||    
T  3042290 attcacctttttaaaaatgaataagtgggatgtccagagttcgaaccacaatccgtatatataacaatgcatatctctgtcaattgagatatgctcacgg 3042389  T
Q  261 gaacgatgtgtcatttaatatatactaaaaatggatatggtaataatgaatctatacaaccgtgttgaagtaaacatagccgacccaataaattttgaat 360  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3042390 gaacgatgtgtcatttaatatatacttaaaatggatatggtaataatgaatctatataaccgtgttgaagtaaacatagccgacccaataaattttgaat 3042489  T
Q  361 ag---annnnnnnnngaaggaaggaaaataaattttgaatagttggtgaaatctaaagcggattttatatcgaagcattttaagtgtgtttataaacatt 457  Q
    ||                  |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3042490 agttttttttttatttttttaaggaaaataaattttgaatagttggtgaagtctaaagcggattttatatcg-agcattttaagtgtgtttataaacatt 3042588  T
Q  458 ctttcnnnnnnnnnngtgtgtttataaacatttcttcgaaaag 500  Q
    |||||          ||||||||||||||||||||||||||||    
T  3042589 ctttc-aaaaaaaaagtgtgtttataaacatttcttcgaaaag 3042630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 31099062 - 31098952
Alignment:
Q  10 gggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgt 109  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  31099062 gggtatgggatactcttgtgaaacctatcagtcaaccgtatatcaaactgtctgtcacccacaaaaaccaaggtaatctaggcaccaagaccgattctgt 31098963  T
Q  110 aaaagtcacga 120  Q
    |||||||||||    
T  31098962 aaaagtcacga 31098952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5091890 - 5091771
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  5091890 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 5091791  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  5091790 cgattccgtaaaagtcacga 5091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29955424 - 29955305
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||| | ||||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| ||| | | ||||||||||    
T  29955424 tcaaaagtcgggtaggggatattcttgtgaaacctatcagtcaaccgtatatcaaactgtccgtcacccacaaaaaccaagataatccaagcaccaagac 29955325  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  29955324 cgattccgtaaaagtcacga 29955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 32657636 - 32657526
Alignment:
Q  10 gggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgt 109  Q
    ||||| |||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||| ||||||||||||  |||||||||||| |||||| ||    
T  32657636 gggtaggggatactcttgtgaaacctatcagtcaactgtgtatcaaactgtccgtcaccaacaaaaaccaaggtaatttaggcaccaagatcgattccgt 32657537  T
Q  110 aaaagtcacga 120  Q
    |||||||||||    
T  32657536 aaaagtcacga 32657526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3066471 - 3066587
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||||| | |  |||||||||    
T  3066471 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaacggtatatcaaactgtctgtcacccacaaaaatcaaggtaatcca-acaccaagac 3066569  T
Q  101 cgattctgtaaaagtcac 118  Q
    |||||| |||||||||||    
T  3066570 cgattcggtaaaagtcac 3066587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 3061276 - 3061381
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| || ||||||||| | ||||||||| ||||||||  ||    
T  3061276 ggtaggggatactcttgtgaaacctatcaatcaacggtatatcaaactgttcgtcacccacaaaatccaaggtaatccaggcaccaaaaccgattcctta 3061375  T
Q  111 aaagtc 116  Q
    ||||||    
T  3061376 aaagtc 3061381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 3246465 - 3246583
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||| |||||||  || ||||||||||||| ||| | ||||||| || ||||| ||||||||||| ||| ||   ||||||||||| |||||| ||    
T  3246465 gtcaagtaatctagtggttagaattcacctttttcaaagtaaataagtagggtgttcggagttcgaacctcagccc---catataacaatgcatgtccct 3246561  T
Q  239 gccaattgagatatgctcacgg 260  Q
    | ||| |||| |||||||||||    
T  3246562 gtcaactgagctatgctcacgg 3246583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 10020445 - 10020559
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||| ||||||  || ||||||||||||| || ||||||||||||| ||||| | ||||||||| ||  || | ||||||||||| |||||| ||    
T  10020445 gtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatgcatgtccct 10020544  T
Q  239 gccaattgagatatg 253  Q
    | ||| |||| ||||    
T  10020545 gtcaactgagctatg 10020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 7162665 - 7162766
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||||||||| || |||||||||||| || ||||||||||||||| |   || | ||||||||||| ||| || |||||||| ||| |||| |||||    
T  7162665 aattcacctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatgcatatccctgccaatcgagttatgttcacg 7162764  T
Q  260 gg 261  Q
    ||    
T  7162765 gg 7162766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 41012577 - 41012676
Alignment:
Q  160 aattcaccttttttaaaa-tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcac 258  Q
    |||||||||||||| ||  |||||||||||||||||| | |||||| |  | | || ||||||||||||| |||||| || ||||||||| |||||||||    
T  41012577 aattcacctttttttaaggtgaataagtgggatgttcggggttcgagctccggcccctacatataacaatgcatgtccctaccaattgagctatgctcac 41012676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 7392282 - 7392404
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||| ||||| ||| ||||||  ||||| ||  |||||||||||| ||||| | |||| |||| ||  |  | ||||||||||| |||||  ||    
T  7392282 gtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatgcatgttcct 7392381  T
Q  239 gccaattgagatatgctcacggg 261  Q
    |||||||||| ||||||||||||    
T  7392382 gccaattgagctatgctcacggg 7392404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 1513595 - 1513487
Alignment:
Q  149 ctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgag 248  Q
    |||||| ||||||||||| ||||  ||  |||||||||||| ||||| | ||||||||| ||  || ||||||||||||| |||||| ||||||| |||     
T  1513595 ctagtggctaaaattcacattttc-aaggtgaataagtggggtgttcggtgttcgaacctcaacccctacatataacaatgcatgtccctgccaactgat 1513497  T
Q  249 atatgctcac 258  Q
     |||||||||    
T  1513496 ttatgctcac 1513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 7465506 - 7465457
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacgggaacgat 267  Q
    ||||||| ||| |||||||||||||| |||| ||||||||||||||||||    
T  7465506 catataataatgcatgtctctgccaactgagctatgctcacgggaacgat 7465457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 35498518 - 35498394
Alignment:
Q  137 tagtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtct 236  Q
    |||||||||| | ||||| ||| ||||||||||||| ||| |||||||||||| ||| |  |||| ||||| ||  || | ||||||| ||| ||||||     
T  35498518 tagtcaagtaatatagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtttgaacc-caacccctgcatataataatgcatgtcc 35498420  T
Q  237 ctgccaattgagatatgctcacggga 262  Q
    ||||||| |||| |||||| ||||||    
T  35498419 ctgccaactgagttatgcttacggga 35498394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 14772388 - 14772436
Alignment:
Q  216 tacatataacaatacatgtctctgccaattgagatatgctcacgggaac 264  Q
    ||||| ||||||| |||||||||||||| |||| |||||||||||||||    
T  14772388 tacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 14772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 15222840 - 15222888
Alignment:
Q  216 tacatataacaatacatgtctctgccaattgagatatgctcacgggaac 264  Q
    ||||| ||||||| |||||||||||||| |||| |||||||||||||||    
T  15222840 tacatgtaacaatgcatgtctctgccaactgagttatgctcacgggaac 15222888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 29658250 - 29658371
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacat-gtctc 237  Q
    ||||||||| |||||| ||| |||||||||| |  ||  |||||||||||| ||| | | ||||||||| | | || | ||||||||||| ||| ||| |    
T  29658250 gtcaagtagcctagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcgc 29658347  T
Q  238 tgccaattgagatatgctcacggg 261  Q
    ||||||||||| ||||||||||||    
T  29658348 tgccaattgagctatgctcacggg 29658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 38363272 - 38363156
Alignment:
Q  145 tagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaat 244  Q
    ||||||||||  || |||||||||||||||| |||||||| || | ||||| || |||||||  | | || | |||||||||||  ||||  ||||||||    
T  38363272 tagtctagtggttagaattcaccttttttaagatgaataaatgaggtgttcggaattcgaacatcggcccttgcatataacaatgtatgttcctgccaat 38363173  T
Q  245 tgagatatgctcacggg 261  Q
    |||  ||||||||||||    
T  38363172 tgaactatgctcacggg 38363156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 37917511 - 37917384
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||| |||||||||||| ||||||  ||||| ||| |||||||||||| |||| || ||| ||||| ||  || | |||||||  || |||||  ||    
T  37917511 gtcaagttgtctagtgactataattcatttttttcaaagtgaataagtggggtgtttagggtttgaaccccaacccctgcatataattatgcatgttcct 37917412  T
Q  239 gccaattgagatatgctcacgggaacga 266  Q
     |||| |||| |||||||||||| ||||    
T  37917411 accaactgagctatgctcacggggacga 37917384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 42407972 - 42407912
Alignment:
Q  145 tagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||||||||| |||||||||  |||||||| |  ||||||||||| ||||||||||||||||    
T  42407972 tagtctagtgattaaaattca--ttttttaagagaaataagtgggaagttcagagttcgaacc 42407912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 47355929 - 47355874
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcacctttttt-aaaatgaataagtgggatgt 193  Q
    ||||||||| ||||||| || |||||| ||||||| ||||||||||||||||||||    
T  47355929 gtcaagtagcctagtgattagaattcatctttttttaaaatgaataagtgggatgt 47355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 3955021 - 3955071
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    |||||||| |||| || ||||||||||| |||||||| |||||||||||||    
T  3955021 gtcaagtaatctaatggctaaaattcacattttttaagatgaataagtggg 3955071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 8147241 - 8147283
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacgg 260  Q
    ||||||||||| |||||| |||||||||||| |||||||||||    
T  8147241 catataacaatgcatgtccctgccaattgagctatgctcacgg 8147283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 32814946 - 32814896
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    ||||||||||| ||||  ||||||||||||||||| | |||||||||||||    
T  32814946 gtcaagtagtccagtggttaaaattcacctttttttatatgaataagtggg 32814896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 42976576 - 42976625
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgg 188  Q
    |||||||||||||||   || ||||||||||||||||| |||||||||||    
T  42976576 gtcaagtagtctagtaggtagaattcaccttttttaaagtgaataagtgg 42976625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 11808158 - 11808034
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttt-taaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctc 237  Q
    |||||||||||||||   || ||||||| ||||| |||  |||||||||||| ||| | | ||||||||| |   || | ||||||||||| |||||| |    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccc 11808059  T
Q  238 tgccaattgagatatgctcacggga 262  Q
    | ||||||||| || ||||||||||    
T  11808058 taccaattgagctaagctcacggga 11808034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 263
Target Start/End: Original strand, 23470477 - 23470600
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||| |||||||||||  || || |||||||||| || |||||||| |||||||| | | ||||||||   || || ||||||||| |||||||||   |    
T  23470477 gtcaggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaactctag-ccctacatataataatacatgttcat 23470575  T
Q  239 gccaattgagatatgctcacgggaa 263  Q
    ||||| |||| |||||||| |||||    
T  23470576 gccaactgagctatgctcaagggaa 23470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 264
Target Start/End: Original strand, 31475823 - 31475942
Alignment:
Q  144 gtagtctagtgacta-aaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgcc 241  Q
    ||||||||||| ||| ||||||||   ||||||| |||||||||||| |||   | ||||||||| ||| || | ||||||| ||| || |||| |||||    
T  31475823 gtagtctagtggctagaaattcac---ttttaaagtgaataagtggggtgtcaggggttcgaaccccagcccctgcatataataatgcaatgtccctgcc 31475919  T
Q  242 aattgagatatgctcacgggaac 264  Q
    || |||| |||||||||||||||    
T  31475920 aactgagctatgctcacgggaac 31475942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 32514691 - 32514739
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacgggaacga 266  Q
    ||||||| |||||||||||||||||| |||  |||||||||||| ||||    
T  32514691 catataataatacatgtctctgccaactgaactatgctcacggggacga 32514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 41000879 - 41000823
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttc 195  Q
    |||||||||||| |||  || ||||||| ||||||||  ||||||||||||||||||    
T  41000879 gtcaagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttc 41000823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27999421 - 27999540
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||||  |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  27999421 tcaaaaatcaggtaggggatactcttgtgaagcctatcagtcaaccgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccaggcaccaagac 27999520  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||||||||||||||||    
T  27999521 cgattctgtaaaagtcacga 27999540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28090155 - 28090274
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||||  |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  28090155 tcaaaaatcaggtaggggatactcttgtgaagcctatcagtcaaccgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccaggcaccaagac 28090254  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||||||||||||||||    
T  28090255 cgattctgtaaaagtcacga 28090274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28096478 - 28096597
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||||  |||| |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  28096478 tcaaaaatcaggtaggggatactcttgtgaagcctatcagtcaaccgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccaggcaccaagac 28096577  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||||||||||||||||    
T  28096578 cgattctgtaaaagtcacga 28096597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1918672 - 1918791
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||| |||||  ||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||| |||||||||||| | ||||||||||||    
T  1918672 tcaaaaatcgggtagaggatactcttgtgaaacctgtcagtcaaccgtatatcaaattgtccgtcacccacaaaaaccaaggtaatccaggcaccaagac 1918771  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  1918772 cgattccgtaaaagtcacga 1918791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19820615 - 19820496
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | |||||||||||     
T  19820615 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagat 19820516  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  19820515 cgattccgtaaaagtcacga 19820496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19840836 - 19840717
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | |||||||||||     
T  19840836 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagat 19840737  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  19840736 cgattccgtaaaagtcacga 19840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21590415 - 21590532
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  21590415 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 21590514  T
Q  101 cgattctgtaaaagtcac 118  Q
    ||||||||||||||||||    
T  21590515 cgattctgtaaaagtcac 21590532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 5000613 - 5000722
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||| |||||||||||| | ||||||||||| |||||| |||    
T  5000613 ggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaattgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagatcgattccgta 5000712  T
Q  111 aaagtcacga 120  Q
    ||||||||||    
T  5000713 aaagtcacga 5000722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 5012283 - 5012392
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||| |||||||||||| | ||||||||||| |||||| |||    
T  5012283 ggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaattgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagatcgattccgta 5012382  T
Q  111 aaagtcacga 120  Q
    ||||||||||    
T  5012383 aaagtcacga 5012392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 42110909 - 42111015
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | ||||||||||| |||||| |||    
T  42110909 ggtaggggatactcgtgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagatcgattccgta 42111008  T
Q  111 aaagtca 117  Q
    |||||||    
T  42111009 aaagtca 42111015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 205164 - 205045
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| || |||  |||||||||||||| ||| ||||||||||||   |||||||||||     
T  205164 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtgtatctaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 205065  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  205064 cgattccgtaaaagtcacga 205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 36439432 - 36439537
Alignment:
Q  15 agggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgtaaaag 114  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||| |||||| ||| ||||||||||||   ||||||||||| |||||| |||||||    
T  36439432 agggatactcttgtgaaacctatcagtcaactatatatcaaactgtctgtcaccaacaaaaaccaaggtaattcaggcaccaagatcgattccgtaaaag 36439531  T
Q  115 tcacga 120  Q
    ||||||    
T  36439532 tcacga 36439537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 39334857 - 39334982
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||   ||||||||||| ||| || |  |||||| ||| |||||| ||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaaccccagcccctgtatataataatgcatgtccct 39334956  T
Q  239 gccaattgagatatgctcacgggaac 264  Q
    ||||| |||| |||||||||||||||    
T  39334957 gccaactgagttatgctcacgggaac 39334982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 34107393 - 34107271
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||||||| ||| ||||||| ||||| ||  |||||||||||| |||   ||||||||||| ||  || | |||||||  ||||||||| ||    
T  34107393 gtcaagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatacatgtccct 34107294  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| ||||||||||||    
T  34107293 gccaactgagctatgctcacggg 34107271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 13900859 - 13900800
Alignment:
Q  61 ccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgtaaaagtcacga 120  Q
    |||||||||||| |||||||||||| | ||||||||||| |||||| |||||||||||||    
T  13900859 ccgtcacccacaaaaaccaaggtaatccaggcaccaagatcgattccgtaaaagtcacga 13900800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 32256255 - 32256187
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||||||| |||||||||| |||||| |||||| ||  |||||||||||||||| | |||||||||||    
T  32256255 gtcaagtagcctagtgactataattcaactttttcaatgtgaataagtgggatgtccggagttcgaacc 32256187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 36413879 - 36413783
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtc 235  Q
    ||||||||| ||| || ||||||||||||||||| ||| |||||||||||| ||| ||| ||||||||  | | || | ||||||||||| ||||||    
T  36413879 gtcaagtagcctaatggctaaaattcacctttttcaaagtgaataagtggggtgtccagggttcgaactccggcccctgcatataacaatgcatgtc 36413783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 4529756 - 4529806
Alignment:
Q  156 ctaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaac 206  Q
    ||||||||||||||||| ||| |||||||||||| ||||| ||||||||||    
T  4529756 ctaaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaac 4529806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 14307681 - 14307791
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgaga 249  Q
    ||||| ||| ||||||| ||||||||| |||||||||||| ||||| | ||||||||| |   || | ||||||||||| |||||| || |||| ||||     
T  14307681 tagtggctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatgcatgtccctaccaactgagc 14307780  T
Q  250 tatgctcacgg 260  Q
     ||||||||||    
T  14307781 catgctcacgg 14307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 32677448 - 32677398
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    |||| ||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  32677448 gtcaggtagtctagtgactataattcacctttttcaaagtgaataagtggg 32677398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 44240080 - 44240133
Alignment:
Q  153 tgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||    
T  44240080 tgactaaaattcatcttttttaaagtgaataagtggga-gttcggagttcgaacc 44240133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 25463242 - 25463367
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||| ||||||  || ||||||  ||||| ||  |||||||  ||| ||||| ||||||||||| || ||| |  ||||||||||  ||||| ||    
T  25463242 gtcaagtagcctagtggttagaattcatttttttcaaggtgaataaaaggggtgttcggagttcgaacctcaatccctgtatataacaatgaatgtccct 25463341  T
Q  239 gccaattgagatatgctcacgggaac 264  Q
    |||||||| | |||||||||||||||    
T  25463342 gccaattgggttatgctcacgggaac 25463367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 30737099 - 30737046
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgt 193  Q
    |||||||| |||||||||| ||||||| ||||||||  ||||||||||||||||    
T  30737099 tcaagtagcctagtgactagaattcacattttttaaggtgaataagtgggatgt 30737046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 36345158 - 36345252
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtc 235  Q
    ||||||||| ||||| ||| || |||||||||| || ||||||||||||  || || |||||||||| || |||| | ||||||||||| ||||||    
T  36345158 tcaagtagtttagtggctagaactcacctttttcaagatgaataagtggagtg-tctgagttcgaactacggtccctgcatataacaatgcatgtc 36345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 32891709 - 32891650
Alignment:
Q  146 agtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||||||| |||||||||||||| |  || ||||||||||||| ||||||| |||||||||    
T  32891709 agtctagtggctaaaattcaccttgt--aagatgaataagtggggtgttcagggttcgaacc 32891650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 35352380 - 35352430
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    |||||||||||||||||||| ||||||| ||||| ||  ||||||||||||    
T  35352380 gtcaagtagtctagtgactagaattcacatttttcaaggtgaataagtggg 35352430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 36277679 - 36277800
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||| |||| |||| | |||||||| | |||||||||  ||| |||||| | ||||| | ||||||||  ||  || ||||||||||||| |||||| ||    
T  36277679 gtcaggtagcctagcggctaaaatttatcttttttaagctgattaagtgaggtgttcgg-gttcgaacttcaacccctacatataacaatgcatgtcact 36277777  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| ||||||||||||    
T  36277778 gccaactgagctatgctcacggg 36277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 38242730 - 38242680
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    |||||||||||| ||||||| ||||||| ||||||||| ||||||| ||||    
T  38242730 gtcaagtagtctggtgactagaattcacattttttaaagtgaataaatggg 38242680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 38581582 - 38581636
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgt 193  Q
    ||||||||| ||||||  || ||| |||||||||||| |||||||||||||||||    
T  38581582 gtcaagtagcctagtggttagaatacaccttttttaagatgaataagtgggatgt 38581636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 7938095 - 7938140
Alignment:
Q  143 agtagtctagtgactaaaattcaccttttttaaaatgaataagtgg 188  Q
    ||||||||| ||||||||||| |||||||| ||| |||||||||||    
T  7938095 agtagtctaatgactaaaatttacctttttcaaagtgaataagtgg 7938140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 41305063 - 41305160
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctca 257  Q
    ||||||||||||| ||  |||||||||||| | | | ||||| ||||| ||| || | ||||||  |||||||| ||||||||| |||| ||||||||    
T  41305063 aattcacctttttcaaggtgaataagtggggtatccggagtttgaacctcagcccctgcatatactaatacatgcctctgccaactgagctatgctca 41305160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 42507406 - 42507357
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    ||||||||| | ||| ||| ||||||||||||| ||||||||||||||||    
T  42507406 tcaagtagtttggtgtctagaattcacctttttcaaaatgaataagtggg 42507357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 20942085 - 20942133
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtg 187  Q
    |||||||||||||||||||| ||||||| ||||| ||  ||||||||||    
T  20942085 gtcaagtagtctagtgactagaattcacttttttcaaggtgaataagtg 20942133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 40172483 - 40172439
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaata 183  Q
    |||||||| ||||||| ||||||||||||||||| || |||||||    
T  40172483 gtcaagtaatctagtggctaaaattcacctttttcaagatgaata 40172439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 857626 - 857507
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||| |||||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  857626 tcaaaaactgggtagggtatactcttgtgaaacctatcagtcaaccgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccaggcaccaagac 857527  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||  |||||||||||||    
T  857526 cgatttcgtaaaagtcacga 857507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11824811 - 11824695
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | |||||||||||     
T  11824811 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagat 11824712  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||| ||||||||||    
T  11824711 cgattccgtaaaagtca 11824695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 33005286 - 33005402
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | |||||||||||     
T  33005286 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagat 33005385  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||| ||||||||||    
T  33005386 cgattccgtaaaagtca 33005402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31484468 - 31484349
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||||||| | |||||||||||     
T  31484468 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaattgtccgtcacccacaaaaaccaaggtaatccaggcaccaagat 31484369  T
Q  101 cgattctgtaaaagtcacga 120  Q
     ||||| |||||||||||||    
T  31484368 tgattccgtaaaagtcacga 31484349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36090237 - 36090356
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  36090237 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 36090336  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||| ||||||||||||    
T  36090337 cgattctataaaagtcacga 36090356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 49565221 - 49565340
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  49565221 tcaaaaaccgggtaggggatactcttgtgaaacctatcagacaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 49565320  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||| ||||||||||||||    
T  49565321 cgattgtgtaaaagtcacga 49565340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 35713982 - 35713878
Alignment:
Q  16 gggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgtaaaagt 115  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||| |||||||   || |||||||| |||||| ||||||||    
T  35713982 gggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaacaaaggtaattcagacaccaagatcgattccgtaaaagt 35713883  T
Q  116 cacga 120  Q
    |||||    
T  35713882 cacga 35713878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43508933 - 43509052
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |  ||| |||||||||||| | |||||||||||     
T  43508933 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcgctaacaaaaaccaaggtaatccaggcaccaagat 43509032  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||  ||||| ||||||    
T  43509033 cgattccataaaattcacga 43509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 40160853 - 40160734
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctg 239  Q
    |||||||| |||||| ||| ||||||||||||| ||  |||||||||||| ||| | | |||| |||| ||| ||   ||||||||||| |||||| |||    
T  40160853 tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccagccccggcatataacaatgcatgtccctg 40160754  T
Q  240 ccaattgagatatgctcacg 259  Q
    ||||||||| ||||||||||    
T  40160753 ccaattgagctatgctcacg 40160734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 261
Target Start/End: Original strand, 21248971 - 21249087
Alignment:
Q  144 gtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaa 243  Q
    ||||||||||| ||| ||||||||||||| ||  |||||||||||| ||||||| ||||||||| | | || | ||||||| ||| |||||||||| |||    
T  21248971 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggcccctgcatataataat-catgtctctgtcaa 21249069  T
Q  244 ttgagatatgctcacggg 261  Q
     |||| |||||| |||||    
T  21249070 ctgagctatgcttacggg 21249087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 33533322 - 33533205
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||||||   || ||||||| ||||||||  ||||||||||||||||  |  ||||||||| ||  |  ||||||||||||| |||||||||    
T  33533322 gtcaagtagtctagttgttagaattcactttttttaaggtgaataagtgggatgtctatggttcgaaccccaaccactacatataacaatgcatgtctct 33533223  T
Q  239 gccaattgagatatgctc 256  Q
    ||||| |||| |||||||    
T  33533222 gccaactgagttatgctc 33533205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 3461699 - 3461821
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggga-tgttcagagttcgaaccacagtccatacatataacaatacatgtctc 237  Q
    |||||||||||||| |  || |||||||||| || ||||||||||| ||||  ||||| | ||||||||| ||  || ||||||||||||| |||||| |    
T  3461699 gtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggggtgttcggggttcgaaccccaacccctacatataacaatgcatgtccc 3461798  T
Q  238 tgccaattgagatatgctcacgg 260  Q
    || ||| |||| |||||||||||    
T  3461799 tgtcaactgagttatgctcacgg 3461821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 23237481 - 23237365
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||| |||||| |||||| ||||||||||||| ||  |||||| ||||||||| | ||||||||||  |   || ||||||||| ||| |||||| ||    
T  23237481 gtcaagaagtctaatgactagaattcacctttttcaacgtgaatatgtgggatgtccggagttcgaactccgacccctacatataataatgcatgtccct 23237382  T
Q  239 gccaattgagatatgct 255  Q
    ||||| |||| ||||||    
T  23237381 gccaactgagctatgct 23237365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 24160504 - 24160624
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||| ||| ||| |||||| |||||| ||| |||||||||||  ||| | | ||||||||| |   || | ||||||||| | |||||||||    
T  24160504 gtcaagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataacagtgcatgtctct 24160603  T
Q  239 gccaattgagatatgctcacg 259  Q
    ||||| |||| ||||||||||    
T  24160604 gccaactgagttatgctcacg 24160624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 10959251 - 10959129
Alignment:
Q  138 agtcaagtagtctagtgacta-aaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacat-gtc 235  Q
    ||||| ||||||||||||||| ||||||||   ||||||| |||||||||||| ||| | | ||||||||| | | || || |||||| ||| ||| |||    
T  10959251 agtcaggtagtctagtgactagaaattcac---ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctatatataataatgcattgtc 10959155  T
Q  236 tctgccaattgagatatgctcacggg 261  Q
     ||||||| |||| ||||||||||||    
T  10959154 cctgccaactgagctatgctcacggg 10959129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 21142709 - 21142756
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagt 186  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||||||    
T  21142709 gtcatgtagcctagtgactagaattcaccttttttaaagtgaataagt 21142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 262
Target Start/End: Complemental strand, 31680850 - 31680728
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||| |||||||||| ||||||||||||| ||||||  |||||||||||| ||| |  ||||| |||| ||  |  ||| ||||||||| |||||| ||    
T  31680850 gtcaaatagtctagtggctaaaattcacct-ttttaaggtgaataagtggggtgtccgaagttcaaaccccaacctctacgtataacaatgcatgtccct 31680752  T
Q  239 gccaattgagatatgctcacggga 262  Q
     | || |||| |||||||||||||    
T  31680751 acaaactgagctatgctcacggga 31680728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 36331704 - 36331824
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacat-gtctc 237  Q
    |||| ||||||||||| ||| |||||||  |||||||| |||||||||||| ||| | | ||||||||| |   || | ||||||| ||| ||| ||| |    
T  36331704 gtcaggtagtctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccc 36331801  T
Q  238 tgccaattgagatatgctcacgg 260  Q
    ||||||||||| |||||||||||    
T  36331802 tgccaattgagctatgctcacgg 36331824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 36763551 - 36763500
Alignment:
Q  139 gtcaagtagtctagtgacta-aaattcaccttttttaaaatgaataagtggg 189  Q
    |||||||||||||||| ||| |||||||||||||| || |||||||||||||    
T  36763551 gtcaagtagtctagtggctagaaattcacctttttaaagatgaataagtggg 36763500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 4478344 - 4478398
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgt 193  Q
    |||| ||||||||||| |||||||| || ||||| || |||||||||||||||||    
T  4478344 gtcaggtagtctagtggctaaaatttacatttttaaagatgaataagtgggatgt 4478398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 266
Target Start/End: Complemental strand, 14868773 - 14868676
Alignment:
Q  170 ttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgccaattgagatatgctcacgggaacga 266  Q
    ||||||| |||||||||||| ||||| | ||||||||| | | || | ||||||| ||| || |||| ||||||| |||| |||||||||||| ||||    
T  14868773 ttttaaagtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggggacga 14868676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 23025995 - 23025894
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||||||||||||| |||||||||||| |||   | |||| |||| || ||  ||||| ||| ||| ||||| |||||||| | || ||||||||||    
T  23025995 aattcaccttttttaaagtgaataagtggggtgtctggggttcaaacctcaatcgctacatttaataatgcatgtttctgccaacttagctatgctcacg 23025896  T
Q  260 gg 261  Q
    ||    
T  23025895 gg 23025894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 47497196 - 47497147
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    ||||||||| |||||  |||||||||||||||||||  ||||||||||||    
T  47497196 tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtggg 47497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 17000047 - 16999943
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||| ||| ||| |||||||| |||| || ||||||| ||||| |||   ||||||||||  | | || ||||||||| ||| |||||| ||    
T  17000047 gtcaagtagtcttgtggctacaattcacccttttcaagatgaatatgtggggtgtctggagttcgaactccggcccctacatataataatgcatgtccct 16999948  T
Q  239 gccaa 243  Q
    |||||    
T  16999947 gccaa 16999943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 31902182 - 31902249
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||| |||||||||| |||||||| |||||||| ||  |||||||||||| ||| | |||||||||||    
T  31902182 gtcaaatagtctagtggctaaaatttaccttttt-aaggtgaataagtggggtgtccggagttcgaacc 31902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 39946567 - 39946508
Alignment:
Q  179 gaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctg 239  Q
    ||||||||||| ||||| ||||||||||| ||  || || |||||||||||||||||||||    
T  39946567 gaataagtggggtgttcggagttcgaacc-caacccctatatataacaatacatgtctctg 39946508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 7e-35; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42346094 - 42345975
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| |||||||||||| | |||||||||||     
T  42346094 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaatccaggcaccaagat 42345995  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  42345994 cgattccgtaaaagtcacga 42345975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 14147723 - 14147829
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| |||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||| |||||||||||| | ||||||||||| |||||| |||    
T  14147723 ggtaggggatactcttgtgaaacctatcagtcaagtgtatatcaaactgtccatcacccacaaaaaccaaggtaatccaggcaccaagatcgattccgta 14147822  T
Q  111 aaagtca 117  Q
    |||||||    
T  14147823 aaagtca 14147829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 53286622 - 53286503
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||| | |||| ||||||||| ||||| ||| |||| ||||||| | |||||||||||     
T  53286622 tcaaaaactgggtaggggatactcttgtgaaagctatcagtcaactgcatatcaaactgtccttcaccaacaaaaactaaggtaatccaggcaccaagat 53286523  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||| ||||||    
T  53286522 cgattccgtaaaattcacga 53286503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 20610858 - 20610739
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||| ||||||||||| ||| ||||||||||||||||  |||||||||||||||| | ||||||||||| | | || | ||||||||||| |||||| ||    
T  20610858 gtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatgcatgtccct 20610759  T
Q  239 gccaattgagatatgctcac 258  Q
    ||||| |||| |||||||||    
T  20610758 gccaactgagctatgctcac 20610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 49039424 - 49039543
Alignment:
Q  142 aagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgcc 241  Q
    |||||| |||||| ||| ||||||||||||| ||  |||||||||||| ||| | | ||||||||| |||||| | ||||||||||| |||||| |||||    
T  49039424 aagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatataacaatgcatgtccctgcc 49039523  T
Q  242 aattgagatatgctcacggg 261  Q
    || |||| ||||||||||||    
T  49039524 aactgagctatgctcacggg 49039543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 253
Target Start/End: Original strand, 12585537 - 12585649
Alignment:
Q  141 caagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgc 240  Q
    |||||||||||||| ||| ||||||||||||| || ||||||||||| | ||||| | ||||||||  | | || ||||||||||||| |||||| ||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaactccggcccttacatataacaatgcatgtccctgc 12585636  T
Q  241 caattgagatatg 253  Q
    ||| |||| ||||    
T  12585637 caactgagttatg 12585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 54854155 - 54854277
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||||||| ||| ||||||| ||||| ||  |||||||||| ||||| | | ||||||||| ||| || | |||||||  || |||||| ||    
T  54854155 gtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatataattatgcatgtccct 54854254  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| ||||||||||||    
T  54854255 gccaactgagctatgctcacggg 54854277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 264
Target Start/End: Complemental strand, 6202722 - 6202597
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||  ||||||||| ||||||||||||| || |||||||||| || ||| | | |||||||||  || || |||||| |||||  |||||| ||    
T  6202722 gtcaagtagcttagtgactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaaccctagcccctacataaaacaaagcatgtcgct 6202623  T
Q  239 gccaattgagatatgctcacgggaac 264  Q
    ||||| |||| || ||||||| ||||    
T  6202622 gccaactgagttaagctcacgagaac 6202597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 30032915 - 30032812
Alignment:
Q  157 taaaattcaccttttttaaaa-tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgct 255  Q
    ||||||||||||||||| ||| ||||||| |||| ||||| ||||||||||| |  ||||| ||||||||||| ||||||| || ||  |||| ||||||    
T  30032915 taaaattcacctttttttaaagtgaataattggg-tgttcggagttcgaaccccgatccatgcatataacaatgcatgtctttggcagctgagttatgct 30032817  T
Q  256 cacgg 260  Q
    |||||    
T  30032816 cacgg 30032812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 29362842 - 29362885
Alignment:
Q  10 gggtaagggatactcttgtgaaacctatcagtcaacggtatatt 53  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  29362842 gggtaggggatactcttgtgaaacctatcagtcaactgtatatt 29362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 41492475 - 41492596
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||  |||||| ||| ||||||||||||| ||  | |||||||||| ||| ||| ||||||||| | | || | ||||||| ||| |||||| ||    
T  41492475 gtcaagtaacctagtggctagaattcacctttttcaaggtaaataagtggggtgtccag-gttcgaaccccggcccctgcatataataatgcatgtccct 41492573  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| ||||||||||||    
T  41492574 gccaactgagctatgctcacggg 41492596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 44449483 - 44449568
Alignment:
Q  179 gaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacgggaac 264  Q
    |||||||||||||| || |||||| |||| | | || ||||||||||||| |||||  |||| || |||| |||||||||||||||    
T  44449483 gaataagtgggatgctcggagttcaaaccccggcccctacatataacaatgcatgttcctgctaactgagttatgctcacgggaac 44449568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 264
Target Start/End: Complemental strand, 27921994 - 27921890
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||| |||||||| ||||||||||| |||||   | ||||||||| | | || | ||||||| ||| |||||| || |||| |||| ||||||||||    
T  27921994 aattcacattttttaagatgaataagtgagatgtctggggttcgaaccccggcccctgcatataataatgcatgtccctaccaactgagctatgctcacg 27921895  T
Q  260 ggaac 264  Q
    |||||    
T  27921894 ggaac 27921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 33359933 - 33359814
Alignment:
Q  142 aagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgcc 241  Q
    |||||| |||||| ||| ||||||||||||| ||  |||||||||||| ||| ||| ||||||||| |   || | |||||||||||  |||||  || |    
T  33359933 aagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcatataacaatgaatgtccatgtc 33359834  T
Q  242 aattgagatatgctcacggg 261  Q
    || |||| ||||||||||||    
T  33359833 aactgagctatgctcacggg 33359814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 48501665 - 48501760
Alignment:
Q  170 ttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgccaattgagatatgctcacgggaac 264  Q
    ||||||| |||||||||||| |||||   ||||||||| ||| || | ||||||| |||||| |||| | |||||||||| ||||||||| |||||    
T  48501665 ttttaaagtgaataagtggggtgttcgatgttcgaaccccagcccctgcatataataatacattgtccccgccaattgagttatgctcacaggaac 48501760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 9302634 - 9302684
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    ||||||||||||||||| |||||||||||||||| ||  ||||||| ||||    
T  9302634 gtcaagtagtctagtgattaaaattcacctttttcaaggtgaataaatggg 9302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 32887250 - 32887180
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccac 209  Q
    ||||| |||||| ||| ||||||||||| ||||| || || |||||||||| ||| | |||||||||||||    
T  32887250 gtcaattagtcttgtggctaaaattcacatttttcaagattaataagtggggtgtccggagttcgaaccac 32887180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 36045928 - 36045830
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcac 258  Q
    ||||||||||||| || |||| |||||| | ||| | ||||||||| | ||  || | ||||||||||| |||||| ||| |||||||| |||||||||    
T  36045928 aattcacctttttcaatatgactaagtgaggtgtccggagttcgaatctcaacccctgcatataacaatgcatgtccctgtcaattgagctatgctcac 36045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 38657607 - 38657537
Alignment:
Q  191 tgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacggg 261  Q
    ||||| ||||||||||  |||||| | ||||||||||| |||||| ||||||| ||||  |||||||||||    
T  38657607 tgttcggagttcgaacttcagtccctgcatataacaatgcatgtccctgccaactgagccatgctcacggg 38657537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 16336469 - 16336546
Alignment:
Q  157 taaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgt 234  Q
    |||||||||||||||| || || |||||  ||||||||||  ||||||||| ||  || ||||||||||||| |||||    
T  16336469 taaaattcacctttttcaagatcaataaacgggatgttcaaggttcgaaccccaacccctacatataacaatgcatgt 16336546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 39494185 - 39494230
Alignment:
Q  161 attcaccttttttaaaatgaataagtgggatgttcagagttcgaac 206  Q
    |||||||||||||||| |||||||||||| |||||||  |||||||    
T  39494185 attcaccttttttaaagtgaataagtggggtgttcaggattcgaac 39494230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 56875 - 56955
Alignment:
Q  178 tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcac 258  Q
    ||||||| |||| ||||| ||||||||||  | | || | ||||||||||| |||||| ||||||| |||| |||||||||    
T  56875 tgaataaatggggtgttcggagttcgaactccggcccttgcatataacaatgcatgtccctgccaactgagttatgctcac 56955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 21476059 - 21476124
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaac 206  Q
    ||||||||| |||||| ||| |||||||  ||| ||| ||||||||||||||||| | ||||||||||    
T  21476059 gtcaagtagcctagtggctagaattcac--tttataagatgaataagtgggatgtccggagttcgaac 21476124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 36008355 - 36008271
Alignment:
Q  178 tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgccaattgagatatgctcacggg 261  Q
    |||||||||||| ||||| | ||||||||| | | || | ||||||||||| || |||| ||||||| |||| ||||||||||||    
T  36008355 tgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatgctcacggg 36008271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 42432086 - 42432018
Alignment:
Q  180 aataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgag 248  Q
    ||||||| || ||||| ||||||||||| || ||| | ||||||||||| |||||| ||||||| ||||    
T  42432086 aataagtagggtgttcggagttcgaaccccaatccctgcatataacaatgcatgtccctgccaactgag 42432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 48512316 - 48512195
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctc 237  Q
    ||||| |||||||||| ||||||||||||  || |||  |||||||||||| ||| | | || ||||||  || || | ||||||||||| || |||| |    
T  48512316 gtcaaatagtctagtggctaaaattcacc--ttataaggtgaataagtggggtgtccggggtacgaaccctagcccctgcatataacaatgcattgtccc 48512219  T
Q  238 tgccaattgagatatgctcacggg 261  Q
    |||||| |||| ||||||||||||    
T  48512218 tgccaactgagctatgctcacggg 48512195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 50657987 - 50657930
Alignment:
Q  149 ctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacca 208  Q
    ||||||||||||||||| ||| |  || ||||||||||||||||||  ||||||||||||    
T  50657987 ctagtgactaaaattcatcttat--aagatgaataagtgggatgtttggagttcgaacca 50657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 45506305 - 45506424
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  45506305 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 45506404  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  45506405 cgattccgtaaaagtcacga 45506424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48959423 - 48959304
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||   |||||||||||     
T  48959423 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcaccaacaaaaaccaaggtaattcaggcaccaagat 48959324  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  48959323 cgattccgtaaaagtcacga 48959304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 26211052 - 26210942
Alignment:
Q  10 gggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgt 109  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||| | ||| |||||||||||||| ||    
T  26211052 gggtaagggatactcttgtgaaacctatcagtcaaccgtatatcaaactgtccgtcacccataaaaaccaagataatccaggtaccaagaccgattccgt 26210953  T
Q  110 aaaagtcacga 120  Q
    |||| ||||||    
T  26210952 aaaattcacga 26210942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2051069 - 2051188
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||| |  ||||||||||     
T  2051069 tcaaaaaccgggtaggggatattcttgtgaaacctatcagtcaagtgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccgggcaccaagat 2051168  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  2051169 cgattccgtaaaagtcacga 2051188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36870328 - 36870447
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||| |  ||||||||||     
T  36870328 tcaaaaaccgggtaggggatattcttgtgaaacctatcagtcaagtgtatatcaaactgtccgtcacccacaaaaaccaaggtaatccgggcaccaagat 36870427  T
Q  101 cgattctgtaaaagtcacga 120  Q
    |||||| |||||||||||||    
T  36870428 cgattccgtaaaagtcacga 36870447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 13928496 - 13928564
Alignment:
Q  4 aaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccaca 72  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  13928496 aaaatcgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtccgtcacccaca 13928564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 263
Target Start/End: Original strand, 7015662 - 7015787
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaat-aagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctc 237  Q
    |||||||| | |||||  |||||||||| ||||| ||  ||||| ||||||| ||||| ||||||||||| ||| || ||||||||||||| |||||| |    
T  7015662 gtcaagtaatttagtggttaaaattcacatttttcaaggtgaattaagtggggtgttcggagttcgaacctcagcccctacatataacaatgcatgtccc 7015761  T
Q  238 tgccaattgagatatgctcacgggaa 263  Q
     ||||| |||| ||||||||||||||    
T  7015762 agccaactgagctatgctcacgggaa 7015787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 18976122 - 18976008
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||| || |||| ||| ||||||| |||||||| ||||| |||| ||||||||| || ||||||  || ||| | ||||||||||| |||||||||    
T  18976122 gtcaagtaatcgagtggctagaattcactttttttaagatgaagaagtaggatgttcaaagctcgaacttcaatccctgcatataacaatgcatgtctct 18976023  T
Q  239 gccaattgagatatg 253  Q
    | |||||||| ||||    
T  18976022 gacaattgagctatg 18976008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 43327110 - 43327009
Alignment:
Q  158 aaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctca 257  Q
    |||| ||| |||||||||||||||||||||||||||| || ||||||||  |   || | |||||||||||||||||| |||| || |||| ||||||||    
T  43327110 aaaaatcatcttttttaaaatgaataagtgggatgtttagggttcgaacttcgacccctgcatataacaatacatgtccctgcaaactgagttatgctca 43327011  T
Q  258 cg 259  Q
    ||    
T  43327010 cg 43327009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 19866594 - 19866466
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||| ||||| ||| ||||||||||||||||  |||||||||||| ||| | |||||  |||  | | || ||||||||  ||| |||||| ||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagtttaaacttcggcccctacatatactaatgcatgtccct 19866495  T
Q  239 gccaattgagatatgctcacgggaacgat 267  Q
    |||||||||| |||| ||| |||||||||    
T  19866494 gccaattgagttatgttcaagggaacgat 19866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 9769577 - 9769674
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctca 257  Q
    ||||||||||||| ||  |||||||||||| ||| | | ||||||||| || ||| ||||||||| ||| |||||| ||||||| |||| ||||||||    
T  9769577 aattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcatgtccctgccaactgagctatgctca 9769674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 33844736 - 33844668
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    |||||||||||||||| ||| ||||||||||||| ||| |||||||||||| ||| | | |||||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaacc 33844668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 33949242 - 33949310
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    |||||||||||||||| ||| ||||||||||||| ||| |||||||||||| ||| | | |||||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaacc 33949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 9768785 - 9768907
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||| |||| |||||  ||| ||||||||||||| ||  |||||||||||| ||| | | ||||||||| |   || | ||||||||||| |||||| ||    
T  9768785 gtcaggtagcctagtagctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcatgtccct 9768884  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| ||||||||||||    
T  9768885 gccaactgagctatgctcacggg 9768907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 18003923 - 18003813
Alignment:
Q  151 agtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagat 250  Q
    |||| ||| |||||||||||||  |  |||||||||||| ||||| | | ||||||| | | || | ||||||||||| |||||| ||||||| |||| |    
T  18003923 agtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagct 18003824  T
Q  251 atgctcacggg 261  Q
    |||||||||||    
T  18003823 atgctcacggg 18003813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 24889241 - 24889191
Alignment:
Q  157 taaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    |||||||||||||||| ||| |||||||||||| ||||| |||||||||||    
T  24889241 taaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaacc 24889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 9004466 - 9004345
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaa-tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctc 237  Q
    |||||||| ||||||   || |||| ||||||||||||  |||||||||| ||||| | |||||  |||| || ||| | |||||||||||| ||||| |    
T  9004466 gtcaagtaatctagttgttagaatttaccttttttaaaggtgaataagtgagatgtccggagttttaaccccaatccctgcatataacaatatatgtccc 9004367  T
Q  238 tgccaattgagatatgctcacg 259  Q
    |||||| |||| ||||||||||    
T  9004366 tgccaactgagctatgctcacg 9004345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 150 - 263
Target Start/End: Original strand, 26349966 - 26350078
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgaga 249  Q
    ||||||||||||||||  ||||||||  |||||||||||| ||||  | ||||||||| ||  || | ||||||| |||||||||||||||||  | ||     
T  26349966 tagtgactaaaattcatattttttaaggtgaataagtggggtgtttggggttcgaacc-caacccctgcatataataatacatgtctctgccatctaagc 26350064  T
Q  250 tatgctcacgggaa 263  Q
    |||| |||||||||    
T  26350065 tatgttcacgggaa 26350078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 16182928 - 16182812
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||| | |||||  || ||||||  ||||| || ||||||||||||| ||| | | ||| ||||| ||| || ||||||||| ||| |||||||||    
T  16182928 gtcaagtaatttagtggttagaattcatatttttcaagatgaataagtggggtgtccggggtttgaaccccagcccctacatataataatgcatgtctct 16182829  T
Q  239 gccaattgagatatgct 255  Q
    ||||| |||| ||||||    
T  16182828 gccaactgagctatgct 16182812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 9931206 - 9931084
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||||||   || |||||||||| |||||  |||||||||||| ||||  | ||||||||  |||  | | ||||||| ||| |||||| ||    
T  9931206 gtcaagtagtctagtagttagaattcaccttctttaaggtgaataagtggggtgtttggggttcgaactccagctcttgcatataataatgcatgtccct 9931107  T
Q  239 gccaattgagatatgctcacggg 261  Q
    || || |||| ||||||||||||    
T  9931106 gctaactgagttatgctcacggg 9931084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 47645851 - 47645897
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacgggaac 264  Q
    ||||||||||| |||||||||||||| |||| |||||||| ||||||    
T  47645851 catataacaatgcatgtctctgccaactgagctatgctcatgggaac 47645897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 49632341 - 49632291
Alignment:
Q  210 agtccatacatataacaatacatgtctctgccaattgagatatgctcacgg 260  Q
    ||||| ||||||||||||| |||||| |||||||||||| || ||||||||    
T  49632341 agtccctacatataacaatgcatgtccctgccaattgagctacgctcacgg 49632291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 261
Target Start/End: Original strand, 7906303 - 7906424
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctg 239  Q
    |||||||  |||||| ||| ||||||| ||||||||  | |||||| ||| ||| | | ||||||||| ||| || | ||||||||||| |||||| ||     
T  7906303 tcaagtaccctagtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatataacaatgcatgtcccta 7906402  T
Q  240 ccaattgagatatgctcacggg 261  Q
    |||| |||  ||||||||||||    
T  7906403 ccaactgaactatgctcacggg 7906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 9527543 - 9527422
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctc 237  Q
    |||| ||||||||||| ||| ||||||||  || ||| ||||||||||||| ||| ||| |||| |||| |   || | ||||||||||| || |||| |    
T  9527543 gtcaggtagtctagtggctagaattcacc--ttataagatgaataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattgtccc 9527446  T
Q  238 tgccaattgagatatgctcacggg 261  Q
    |||||| |||| ||||||||||||    
T  9527445 tgccaactgagctatgctcacggg 9527422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 12553313 - 12553245
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    |||| |||| |||||| ||| ||||||||||||| ||| |||||||||||| ||| | | |||||||||    
T  12553313 gtcaggtagcctagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacc 12553245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 23750248 - 23750152
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctc 256  Q
    ||||||||||||| || ||||||||||||| ||||||| ||| ||||| |   ||||  |||||||||| ||| || || |||| |||| |||||||    
T  23750248 aattcacctttttcaagatgaataagtggggtgttcagggtttgaaccccgacccatgtatataacaatgcatatccctaccaactgagctatgctc 23750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 34870258 - 34870309
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggat 191  Q
    |||||||| |||||||  |||||||||| ||||| ||||||||||||||||||    
T  34870258 gtcaagtaatctagtggttaaaattcac-tttttcaaaatgaataagtgggat 34870309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 409401 - 409510
Alignment:
Q  11 ggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgta 110  Q
    |||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||   ||||||||||| |||||| |||    
T  409401 ggtaggggatactcttgtgaaacctatcagtcaagtgtatatcaaactgtccgtcacccacaaaaaccaaggtaattcaggcaccaagatcgattccgta 409500  T
Q  111 aaagtcacga 120  Q
    ||||||||||    
T  409501 aaagtcacga 409510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18489439 - 18489558
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||| | | | ||||||||    
T  18489439 tcaaaaaccgggtaggggatactcttgtgaaacctattagtcaacggtatatcaaactgtcagtcacccacaaaaaccaaggtaatccaagaaccaagac 18489538  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||  ||||||||||||    
T  18489539 cgattccataaaagtcacga 18489558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 4954979 - 4955082
Alignment:
Q  160 aattcaccttt-tttaaaatgaataagtgggatgttcagag-ttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctca 257  Q
    ||||||||||| |||||| ||||||| | |||||| | ||| |||||||||| | || | ||||||||||||||||||||||||||||||| ||||||||    
T  4954979 aattcacctttctttaaagtgaataaataggatgt-ctgaggttcgaaccacggcccctgcatataacaatacatgtctctgccaattgagttatgctca 4955077  T
Q  258 cggga 262  Q
    |||||    
T  4955078 cggga 4955082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 7345526 - 7345420
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||||||||||||  |||||||||||| ||||  ||||| ||| | |   || | ||||||| ||| |||||| ||||||| |||| ||||||||||    
T  7345526 aattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatgcatgtccctgccaactgagttatgctcacg 7345427  T
Q  260 ggaacga 266  Q
    |||||||    
T  7345426 ggaacga 7345420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 24572904 - 24572949
Alignment:
Q  216 tacatataacaatacatgtctctgccaattgagatatgctcacggg 261  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||    
T  24572904 tacatataacgatacatgtctctgccaactgagctatgctcacggg 24572949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 37288088 - 37288184
Alignment:
Q  145 tagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgt-tcagagttcgaaccacagtccatacatataacaatacatgtctctgc 240  Q
    |||||||||  ||| |||| |||||||||||| | |||||||||||||| | || ||||||||| ||  || |||||||||| || |||||||||||    
T  37288088 tagtctagtagctataatttaccttttttaaagtaaataagtgggatgtctgagggttcgaaccccaacccctacatataacgatgcatgtctctgc 37288184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 258
Target Start/End: Complemental strand, 43554569 - 43554449
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttca--gagttcgaaccacagtccatacatataacaatacatgtct 236  Q
    |||| |||||||||||| || |||||| |||||| ||| ||||||||| ||||| |||  | ||||||||| ||  || |||||||||||||  |||||     
T  43554569 gtcaggtagtctagtgattagaattcatctttttcaaagtgaataagtaggatg-tcagggggttcgaaccccaacccctacatataacaatggatgtcg 43554471  T
Q  237 ctgccaattgagatatgctcac 258  Q
    ||||||| |||| |||| ||||    
T  43554470 ctgccaactgagctatgttcac 43554449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 37128845 - 37128791
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttc 195  Q
    |||| ||||||||||||||| |||||||  |||||||| |||||||||||| |||||    
T  37128845 gtcaggtagtctagtgactagaattcac--tttttaaagtgaataagtgggttgttc 37128791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 41793028 - 41793076
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacgggaacgat 267  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||||    
T  41793028 catataacaatgcatgtc-ctgccaattgagctatgctcacggggacgat 41793076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 44254299 - 44254356
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||| ||||||||||| ||||| ||  ||||||||| |||||| |||||||||||||    
T  44254299 tagtggctaaaattcacatttttcaaggtgaataagtaggatgtccagagttcgaacc 44254356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 187
Target Start/End: Original strand, 39208845 - 39208893
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtg 187  Q
    |||||||||||||||| ||| ||||||||||||| ||  ||||||||||    
T  39208845 gtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtg 39208893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 37288 - 37172
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||| ||  ||||||||| |||||||||||| ||||||||||||||    
T  37288 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaaccgtatatcaaactatctatcacccacaaaaaccaaggtaatctaggcaccaagac 37189  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||  ||||||||||    
T  37188 cgattgagtaaaagtca 37172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29373468 - 29373584
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||| ||| |||| |||||| ||| |||||||||||| | |||||||||||     
T  29373468 tcaaaaactgggtatgggatactcttgtgaaacctatcagtcaactgtatatcaaaatgtctgtcaccaacaaaaaccaaggtaatccaggcaccaagat 29373567  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||| ||||||||||    
T  29373568 cgattccgtaaaagtca 29373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24457358 - 24457242
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||||| ||| |||| ||||||| | |||||||||||     
T  24457358 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactatccgtcaccaacaaaaacaaaggtaatccaggcaccaagat 24457259  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||| ||||||||||    
T  24457258 cgattccgtaaaagtca 24457242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29370913 - 29371029
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||| |||||||||||| | |||||||||||     
T  29370913 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactgtatatcaaactgtctgtcaccaacaaaaaccaaggtaatccaggcaccaagat 29371012  T
Q  101 cgattctgtaaaagtca 117  Q
    | |||| ||||||||||    
T  29371013 caattccgtaaaagtca 29371029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33006546 - 33006606
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtc 61  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  33006546 tcaaaaatcgggtaagggatactcttgtgaaacctatcagtcaactgtatatcaaactgtc 33006606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 8176095 - 8175993
Alignment:
Q  160 aattcaccttttttaaaa-tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcac 258  Q
    |||||||||||||| ||  |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| |||||||||| ||| |||| |||||||||    
T  8176095 aattcacctttttttaaggtgaataagtggggtgttcggagttcgaacaccagtccctgcatataacaatgcatgtctctgtcaactgagctatgctcac 8175996  T
Q  259 ggg 261  Q
    |||    
T  8175995 ggg 8175993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 22730688 - 22730800
Alignment:
Q  150 tagtgactaaaattcacctt-ttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgag 248  Q
    ||||| ||| |||||||||| ||||||  |||||||||||| ||| |   ||||||||  |||||| | ||||||||||| |||||||||||||| ||||    
T  22730688 tagtggctagaattcaccttattttaaggtgaataagtggggtgtccgaggttcgaacttcagtccctgcatataacaatgcatgtctctgccaactgag 22730787  T
Q  249 atatgctcacggg 261  Q
     ||||||||||||    
T  22730788 ttatgctcacggg 22730800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 7374055 - 7374146
Alignment:
Q  168 ttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||||  |||||||||||| ||||| ||||||||||  |   |||||||||||||||| |||||| |||||||| |||||||| |||||    
T  7374055 ttttttaaggtgaataagtggggtgttcggagttcgaactccgacccatacatataacaatgcatgtccctgccaatcgagatatgttcacg 7374146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 26669635 - 26669757
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||| ||||| ||| ||||||||||||| ||  |||||||||||| |||   | ||||||||| ||| || |||||||||  || |||||| ||    
T  26669635 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 26669734  T
Q  239 gccaattgagatatgctcacggg 261  Q
     |||| |||| ||||||||||||    
T  26669735 accaactgagctatgctcacggg 26669757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 9051277 - 9051388
Alignment:
Q  149 ctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgag 248  Q
    |||||| ||| ||||| ||||||| || | ||||||||| | ||| | | |||||||||  ||||| ||||||||||||| ||| ||  |||||||||||    
T  9051277 ctagtggctagaattctcctttttcaagacgaataagtgagttgtccggggttcgaaccctagtccctacatataacaatgcatatccttgccaattgag 9051376  T
Q  249 atatgctcacgg 260  Q
     |||||||||||    
T  9051377 ctatgctcacgg 9051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 30668162 - 30668281
Alignment:
Q  141 caagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgc 240  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||| |||||   ||||||||      || | ||||||| ||| ||||||| |||    
T  30668162 caagtagtctagtgactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaactctgacccctgcatataataatgcatgtctatgc 30668261  T
Q  241 caattgagatatgctcacgg 260  Q
    ||| |||| |||||||||||    
T  30668262 caactgagttatgctcacgg 30668281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 6455572 - 6455450
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||| |||||| ||| |||||| |||||| ||  ||||||||| || ||| | ||||||||||| ||| |||||||||||| |||  ||||| ||    
T  6455572 gtcaagtagcctagtgtctagaattcatctttttcaaggtgaataagtagggtgtccggagttcgaaccccagcccatacatataataatgtatgtccct 6455473  T
Q  239 gccaattgagatatgctcacggg 261  Q
     |||| |||  |||| |||||||    
T  6455472 accaactgaactatgttcacggg 6455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 34524982 - 34524872
Alignment:
Q  151 agtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagat 250  Q
    |||| ||| |||||||||||||  |  |||||||||||| ||||| | | ||||||| | | || | ||||||||||| |||||| ||||||| |||| |    
T  34524982 agtggctagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagct 34524883  T
Q  251 atgctcacggg 261  Q
    |||||||||||    
T  34524882 atgctcacggg 34524872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 1488128 - 1488091
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgct 255  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  1488128 catataacaatgcatgtctctgccaattgagatatgct 1488091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 10443231 - 10443166
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaa 205  Q
    |||||||||||| ||||||||||||| |||||||||  || ||||||||| ||||| | |||||||    
T  10443231 tcaagtagtctaatgactaaaattcatcttttttaaggtggataagtgggttgttcggggttcgaa 10443166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 9422942 - 9422829
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaa-tgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgag 248  Q
    ||||| ||| |||||||||||| | ||  |||||||||||| ||| | | ||||||||| |||  | |  |||||||||| |||||| ||||||| ||||    
T  9422942 tagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaaccccagctcttgtatataacaatgcatgtccctgccaactgag 9422843  T
Q  249 atatgctcacggga 262  Q
     |||||||||||||    
T  9422842 ttatgctcacggga 9422829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 14981709 - 14981801
Alignment:
Q  170 ttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgccaattgagatatgctcacggg 261  Q
    ||||||| |||||||||||| ||| ||| ||||||||| | | || | ||||||| ||| || |||| ||||||| |||| ||||||||||||    
T  14981709 ttttaaagtgaataagtggggtgtccagggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatgctcacggg 14981801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 264
Target Start/End: Complemental strand, 30905581 - 30905477
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgctcacg 259  Q
    ||||||||||||  ||| | |||||||||||| | |||  |||||||| || ||| ||||||||||||| |||||  || |||| |||| |||| | |||    
T  30905581 aattcaccttttccaaagttaataagtgggatatccaggattcgaacctcaatccctacatataacaatgcatgttcctaccaactgagttatggttacg 30905482  T
Q  260 ggaac 264  Q
    |||||    
T  30905481 ggaac 30905477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10039062 - 10038946
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||| | ||| |||||||||||| | |||||||||||     
T  10039062 tcaaaaaccgggtaggggatactcttgtgaaacctatcagtcaactatatatcaaactgtccgtcatcaacaaaaaccaaggtaatccaggcaccaagat 10038963  T
Q  101 cgattctgtaaaagtca 117  Q
    |||||| ||||||||||    
T  10038962 cgattccgtaaaagtca 10038946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 28537254 - 28537132
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||| |||||| ||| |||||||| |||| ||| |||||||||||| ||| | | ||||||||| | | |||| ||||||||||| ||||||  |    
T  28537254 gtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggcccatgcatataacaatgcatgtccat 28537155  T
Q  239 gccaattgagatatgctcacggg 261  Q
    | |||||||| ||||||||||||    
T  28537154 gtcaattgagttatgctcacggg 28537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 257
Target Start/End: Complemental strand, 38040379 - 38040267
Alignment:
Q  144 gtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaa 243  Q
    |||| |||||||||| ||||||||||||| || |||||||||||||||| || ||||||||||| |   || | ||||||||||| |||||| |||||||    
T  38040379 gtagcctagtgactataattcacctttttcaagatgaataagtgggatg-tccgagttcgaacctcgacccctgcatataacaatgcatgtccctgccaa 38040281  T
Q  244 ttgagatatgctca 257  Q
     |||| ||||||||    
T  38040280 ctgagctatgctca 38040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 120
Target Start/End: Original strand, 20108393 - 20108452
Alignment:
Q  61 ccgtcacccacataaaccaaggtaaactaggcaccaagaccgattctgtaaaagtcacga 120  Q
    |||||||||||| |||||||||||| | ||||||||||| |||||| |||||||||||||    
T  20108393 ccgtcacccacaaaaaccaaggtaatccaggcaccaagatcgattccgtaaaagtcacga 20108452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 35813219 - 35813340
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    ||||||||| |||||| ||| ||||||||||||| |||  ||||||||||| ||| | | |||||||||  || || | ||||||||||| |||||| ||    
T  35813219 gtcaagtagcctagtggctagaattcacctttttcaaag-gaataagtggggtgtcctgggttcgaacctgagcccctgcatataacaatgcatgtccct 35813317  T
Q  239 gccaattgagatatgctcacggg 261  Q
    | ||| |||| ||||||||||||    
T  35813318 gtcaactgagctatgctcacggg 35813340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 40384367 - 40384270
Alignment:
Q  142 aagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctg 239  Q
    ||||||| ||||| ||| ||||||||||||||||  |||||||||||| ||| | ||||||||||| ||| |  | ||||||| ||| ||||||||||    
T  40384367 aagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaaccccagccgctgcatataataatgcatgtctctg 40384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 264
Target Start/End: Original strand, 31280357 - 31280480
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctg 239  Q
    |||||||||||||||  || ||||||||||||| ||  || ||||||||| ||||| | |||||||||   | || | ||||||  |||||||||| |||    
T  31280357 tcaagtagtctagtgggtagaattcacctttttcaaggtggataagtggg-tgttcggggttcgaaccttggcccctgcatatagtaatacatgtccctg 31280455  T
Q  240 ccaattgagatatgctcacgggaac 264  Q
    |||| |||| |||||||||||||||    
T  31280456 ccaactgagctatgctcacgggaac 31280480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 30255410 - 30255315
Alignment:
Q  160 aattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgagatatgct 255  Q
    ||||||| ||||||||| |||||||||| | ||||  | ||||||||| |||  | | ||||||||||| ||||||||| ||||||||| ||||||    
T  30255410 aattcactttttttaaagtgaataagtgtggtgtttggggttcgaaccgcagcgcctgcatataacaatgcatgtctctaccaattgaggtatgct 30255315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 11246473 - 11246591
Alignment:
Q  142 aagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgcc 241  Q
    ||||||||||||| ||| ||||||||||||| ||  ||||||||||||||||   | ||| || || |   || | ||||||||||| |||||| |||||    
T  11246473 aagtagtctagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatgcatgtccctgcc 11246572  T
Q  242 aattgagatatgctcacgg 260  Q
    || |||| |||||||||||    
T  11246573 aactgagctatgctcacgg 11246591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 36742022 - 36742066
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacggga 262  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||    
T  36742022 catataacaattcatgtctctgccaactgagctatgctcacggga 36742066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 5749985 - 5750088
Alignment:
Q  137 tagtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtct 236  Q
    |||||||||||||| |||| ||||||| ||||| |||||  |||||||||| | ||| | | |||| |||| ||  |||| ||||||| ||| |||||||    
T  5749985 tagtcaagtagtctggtgattaaaatttaccttatttaagttgaataagtgaggtgtgcggggttcaaaccccaacccatccatataataatgcatgtct 5750084  T
Q  237 ctgc 240  Q
    ||||    
T  5750085 ctgc 5750088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 14077233 - 14077300
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaacc 207  Q
    ||||||||| |||||  || |||||||||||| |||||| |||||||||| ||||||  |||||||||    
T  14077233 tcaagtagtttagtggttagaattcaccttttataaaataaataagtggggtgttcatggttcgaacc 14077300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 17557148 - 17557027
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||||| ||||  | |||| || ||||||||  |||||||||||| ||| | | ||| ||||| |   || ||||||||||||| |||||||||    
T  17557148 gtcaagtagtctggtgatcagaattaactttttttaaggtgaataagtggggtgtccgg-gtttgaaccccgacccctacatataacaatgcatgtctct 17557050  T
Q  239 gccaattgagatatgctcacggg 261  Q
    ||||| |||| || |||||||||    
T  17557049 gccaactgagttaggctcacggg 17557027  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 41539433 - 41539383
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtggg 189  Q
    ||||| |||||||||||||| ||||||||||||| || || ||||||||||    
T  41539433 gtcaaatagtctagtgactagaattcacctttttcaagattaataagtggg 41539383  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 37986844 - 37986897
Alignment:
Q  140 tcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgt 193  Q
    |||||||| |||||| ||| ||||||||||||| ||  ||||||||||||||||    
T  37986844 tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgt 37986897  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 36116932 - 36116972
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcac 258  Q
    |||||| ||||||||||| |||||||||||| |||||||||    
T  36116932 catatagcaatacatgtccctgccaattgagttatgctcac 36116972  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 261
Target Start/End: Complemental strand, 37304022 - 37303930
Alignment:
Q  170 ttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaataca-tgtctctgccaattgagatatgctcacggg 261  Q
    ||||||| |||||||||||| ||| ||| ||||||||| |   || | ||||||| |||||| |||| ||||||| |||| ||||||||||||    
T  37304022 ttttaaagtgaataagtggggtgtccagggttcgaaccccgacccctgcatataataatacattgtccctgccaactgagctatgctcacggg 37303930  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 38535960 - 38535909
Alignment:
Q  142 aagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgtt 194  Q
    |||||||||||||| ||||||||||| |||| ||||||||  |||||||||||    
T  38535960 aagtagtctagtgattaaaattcacc-ttttaaaaatgaaatagtgggatgtt 38535909  T

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Target: scaffold0374 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1018 - 899
Alignment:
Q  1 tcaaaaattgggtaagggatactcttgtgaaacctatcagtcaacggtatattaaactgtccgtcacccacataaaccaaggtaaactaggcaccaagac 100  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||   |||||| ||| ||||| |||||  || |||||||||||| | ||||||||||||    
T  1018 tcaaaaactgggtaggggatactcttatgaaacctatcagtcagtcgtatatcaaattgtccctcaccatcaaaaaccaaggtaatccaggcaccaagac 919  T
Q  101 cgattctgtaaaagtcacga 120  Q
    ||||||||||||||||||||    
T  918 cgattctgtaaaagtcacga 899  T

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Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 139 - 261
Target Start/End: Complemental strand, 1158 - 1036
Alignment:
Q  139 gtcaagtagtctagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctct 238  Q
    |||||||||| ||||| ||| ||||||||||||| ||  |||||||||||| |||   | ||||||||| ||| || |||||||||  || |||||| ||    
T  1158 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccagcccctacatataattatgcatgtccct 1059  T
Q  239 gccaattgagatatgctcacggg 261  Q
     |||| |||| ||||||||||||    
T  1058 accaactgagctatgctcacggg 1036  T

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Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 34020 - 34131
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgaga 249  Q
    ||||| ||| ||||| |||||||||||  ||||||||||  ||| | || |||||||| | | || | ||||||||||| |||||| ||||||| ||||     
T  34020 tagtggctagaattctccttttttaaagagaataagtggagtgtccggaattcgaaccccggcccctgcatataacaatgcatgtccctgccaactgagc 34119  T
Q  250 tatgctcacggg 261  Q
    ||||||||||||    
T  34120 tatgctcacggg 34131  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 25016 - 25059
Alignment:
Q  218 catataacaatacatgtctctgccaattgagatatgctcacggg 261  Q
    ||||||||| | |||||||||||||| |||||||||||||||||    
T  25016 catataacattgcatgtctctgccaactgagatatgctcacggg 25059  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 67269 - 67162
Alignment:
Q  150 tagtgactaaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgtctctgccaattgaga 249  Q
    ||||| ||| ||||||| ||||| ||  ||| |||||||| ||| ||| ||||||||| ||| || ||||||||||||| ||| || || |||| ||||     
T  67269 tagtggctagaattcacttttttcaaggtgattaagtggggtgtccagggttcgaaccccagcccctacatataacaatgcatatccctcccaactgagc 67170  T
Q  250 tatgctca 257  Q
    ||||||||    
T  67169 tatgctca 67162  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 56391 - 56314
Alignment:
Q  157 taaaattcaccttttttaaaatgaataagtgggatgttcagagttcgaaccacagtccatacatataacaatacatgt 234  Q
    |||||||||||||||| || || |||||  ||||||||||  ||||||||| ||  || ||||||||||||| |||||    
T  56391 taaaattcacctttttcaagatcaataaacgggatgttcaaggttcgaaccccaacccctacatataacaatgcatgt 56314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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