View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11482_high_18 (Length: 438)
Name: NF11482_high_18
Description: NF11482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11482_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 99 - 420
Target Start/End: Complemental strand, 32325473 - 32325151
Alignment:
| Q |
99 |
ccattgttcttactgagcttcctttc-aactaatacattttcagatgagtaccctatcttgcttccacttgagtcttccacagaactattatctccacgt |
197 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32325473 |
ccattgttcttactgagcttcctttccaactaatacattttcagatgagtaccctatcttgcttccacttgagtcttccacagaactattatctccacgt |
32325374 |
T |
|
| Q |
198 |
aaaacttcatcgatatcggtagagttgatgccttcaacatccattgtcttctcatgaaaatagtttctcccattaaccaaacaaggacttagaacgatca |
297 |
Q |
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|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
32325373 |
aaaacttcatcggtatcggtagagttgatgccatcaacatccattgtcttctcatgaaaatagtttctcccattaaccaaacaaggacttacaacgatca |
32325274 |
T |
|
| Q |
298 |
ccacaacaaccagaaccatcgcaaatactactctcataatccccatctcttgcctaattattaagcacttcccaataatgcatatatcacaatattgcta |
397 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32325273 |
ccacaacaaccagaaccatcgcaaatactactctcataatccccatctcttgcctaattattaagcacttcccaataatgcatatatcacaatattgcta |
32325174 |
T |
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| Q |
398 |
cacgcaccacccttttataccct |
420 |
Q |
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||||||||||||||||||||||| |
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| T |
32325173 |
cacgcaccacccttttataccct |
32325151 |
T |
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