View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11482_high_44 (Length: 277)

Name: NF11482_high_44
Description: NF11482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11482_high_44
NF11482_high_44
[»] chr4 (27 HSPs)
chr4 (19-267)||(11432481-11432729)
chr4 (83-267)||(6893051-6893234)
chr4 (99-260)||(4576719-4576880)
chr4 (76-267)||(7912773-7912964)
chr4 (99-261)||(22319889-22320051)
chr4 (101-267)||(23620961-23621127)
chr4 (165-267)||(34510363-34510465)
chr4 (99-267)||(55957638-55957806)
chr4 (76-267)||(10183549-10183739)
chr4 (19-259)||(41819318-41819556)
chr4 (101-267)||(30920382-30920547)
chr4 (100-267)||(12154294-12154461)
chr4 (100-267)||(37666004-37666171)
chr4 (161-267)||(32519703-32519809)
chr4 (82-151)||(22749052-22749121)
chr4 (110-267)||(37244078-37244235)
chr4 (160-267)||(36105730-36105837)
chr4 (100-261)||(40629976-40630137)
chr4 (147-248)||(52973655-52973756)
chr4 (181-259)||(4435275-4435353)
chr4 (160-262)||(26660097-26660198)
chr4 (101-257)||(6829073-6829229)
chr4 (139-227)||(43024764-43024852)
chr4 (160-241)||(52264294-52264375)
chr4 (116-248)||(43588265-43588397)
chr4 (177-260)||(32526372-32526455)
chr4 (135-248)||(33051989-33052101)
[»] chr1 (39 HSPs)
chr1 (77-267)||(45377693-45377883)
chr1 (19-267)||(2758846-2759094)
chr1 (76-267)||(4362088-4362279)
chr1 (19-267)||(16010643-16010891)
chr1 (101-259)||(30562185-30562343)
chr1 (80-267)||(4441201-4441388)
chr1 (100-262)||(642723-642885)
chr1 (112-261)||(10158025-10158174)
chr1 (90-267)||(45338978-45339155)
chr1 (164-267)||(47295746-47295849)
chr1 (122-260)||(3839366-3839504)
chr1 (77-267)||(51370103-51370293)
chr1 (135-267)||(7287248-7287380)
chr1 (180-267)||(27089687-27089774)
chr1 (116-248)||(6213145-6213277)
chr1 (101-260)||(17391691-17391850)
chr1 (82-267)||(45756227-45756412)
chr1 (78-260)||(8424476-8424643)
chr1 (118-262)||(25412322-25412466)
chr1 (127-259)||(28397334-28397466)
chr1 (158-262)||(46998056-46998160)
chr1 (100-267)||(41158050-41158217)
chr1 (113-266)||(14346306-14346459)
chr1 (161-242)||(29639674-29639755)
chr1 (80-196)||(7799201-7799316)
chr1 (92-267)||(23757285-23757459)
chr1 (77-267)||(39737195-39737378)
chr1 (165-267)||(11751654-11751756)
chr1 (88-196)||(1826495-1826603)
chr1 (101-224)||(3022574-3022697)
chr1 (77-248)||(4402245-4402416)
chr1 (204-267)||(20953031-20953094)
chr1 (100-262)||(22863163-22863323)
chr1 (188-257)||(756461-756530)
chr1 (99-200)||(37696700-37696801)
chr1 (189-257)||(1825226-1825293)
chr1 (160-260)||(35718394-35718494)
chr1 (104-207)||(6135915-6136018)
chr1 (19-59)||(28397268-28397308)
[»] chr7 (29 HSPs)
chr7 (100-267)||(25685208-25685375)
chr7 (19-256)||(41015852-41016088)
chr7 (76-267)||(32555774-32555965)
chr7 (97-267)||(5034004-5034174)
chr7 (80-267)||(42672655-42672842)
chr7 (76-267)||(9271037-9271230)
chr7 (19-267)||(32420187-32420435)
chr7 (101-267)||(39727153-39727319)
chr7 (77-255)||(18330833-18331011)
chr7 (99-267)||(40727175-40727343)
chr7 (104-267)||(9479205-9479368)
chr7 (165-267)||(34653942-34654044)
chr7 (77-262)||(25072577-25072762)
chr7 (99-259)||(41937807-41937967)
chr7 (110-267)||(42766622-42766779)
chr7 (78-260)||(22166057-22166239)
chr7 (78-260)||(22224764-22224946)
chr7 (99-261)||(21144543-21144707)
chr7 (111-216)||(22541181-22541286)
chr7 (160-241)||(44073529-44073610)
chr7 (105-267)||(38566540-38566699)
chr7 (101-181)||(39725444-39725524)
chr7 (169-224)||(28032058-28032113)
chr7 (163-246)||(37155631-37155714)
chr7 (104-262)||(29171597-29171757)
chr7 (125-227)||(32684169-32684271)
chr7 (101-181)||(39723574-39723654)
chr7 (100-200)||(18793580-18793680)
chr7 (219-267)||(18879693-18879741)
[»] chr5 (32 HSPs)
chr5 (19-267)||(36439748-36439996)
chr5 (83-267)||(40201871-40202055)
chr5 (100-261)||(6391491-6391652)
chr5 (99-267)||(35319211-35319379)
chr5 (111-250)||(40417402-40417541)
chr5 (77-267)||(28207357-28207546)
chr5 (76-262)||(40514657-40514844)
chr5 (76-259)||(8570278-8570461)
chr5 (111-250)||(39981544-39981683)
chr5 (110-267)||(42108442-42108599)
chr5 (136-262)||(28022690-28022816)
chr5 (130-267)||(333637-333774)
chr5 (100-267)||(12580153-12580320)
chr5 (80-267)||(16885344-16885531)
chr5 (76-261)||(29570964-29571138)
chr5 (120-267)||(41386971-41387118)
chr5 (101-267)||(15530002-15530168)
chr5 (100-267)||(19298104-19298272)
chr5 (158-262)||(17742945-17743049)
chr5 (160-261)||(16844557-16844658)
chr5 (99-267)||(22859698-22859866)
chr5 (110-261)||(38876548-38876700)
chr5 (160-259)||(11422667-11422766)
chr5 (165-261)||(39963915-39964011)
chr5 (165-241)||(18988527-18988603)
chr5 (164-262)||(14830573-14830671)
chr5 (191-259)||(32906826-32906893)
chr5 (168-248)||(35412342-35412422)
chr5 (160-267)||(2823533-2823640)
chr5 (164-259)||(18731159-18731254)
chr5 (167-241)||(15680310-15680384)
chr5 (103-144)||(10622595-10622636)
[»] chr3 (22 HSPs)
chr3 (76-259)||(43464542-43464725)
chr3 (99-262)||(9503737-9503900)
chr3 (76-267)||(29697374-29697565)
chr3 (90-267)||(29563674-29563845)
chr3 (19-262)||(22990340-22990583)
chr3 (77-262)||(11836942-11837127)
chr3 (21-260)||(20601414-20601665)
chr3 (99-261)||(36159084-36159246)
chr3 (76-267)||(21523842-21524022)
chr3 (101-262)||(31132901-31133055)
chr3 (77-262)||(44890550-44890735)
chr3 (100-267)||(51880286-51880457)
chr3 (99-262)||(52426213-52426376)
chr3 (165-267)||(45613225-45613327)
chr3 (77-248)||(27483384-27483555)
chr3 (102-186)||(980845-980929)
chr3 (103-260)||(43946710-43946869)
chr3 (160-259)||(27048541-27048640)
chr3 (164-259)||(33458660-33458755)
chr3 (177-259)||(30643188-30643270)
chr3 (91-120)||(22771160-22771189)
chr3 (209-250)||(29719350-29719391)
[»] chr8 (37 HSPs)
chr8 (77-261)||(1222364-1222548)
chr8 (19-248)||(25107434-25107662)
chr8 (112-267)||(21019681-21019836)
chr8 (19-261)||(10710147-10710389)
chr8 (76-267)||(39139235-39139426)
chr8 (160-261)||(40691140-40691241)
chr8 (19-267)||(22738433-22738680)
chr8 (96-262)||(2062672-2062838)
chr8 (19-255)||(2621410-2621646)
chr8 (80-267)||(2374176-2374363)
chr8 (77-267)||(30469274-30469453)
chr8 (112-262)||(19973003-19973152)
chr8 (163-267)||(9617276-9617380)
chr8 (160-267)||(31587974-31588081)
chr8 (112-267)||(3457928-3458083)
chr8 (122-267)||(10811829-10811974)
chr8 (110-257)||(17988962-17989107)
chr8 (160-262)||(31955730-31955832)
chr8 (99-259)||(38996126-38996286)
chr8 (99-259)||(44602148-44602308)
chr8 (77-200)||(2510377-2510500)
chr8 (160-267)||(17006299-17006405)
chr8 (160-267)||(17570843-17570949)
chr8 (110-200)||(44652617-44652707)
chr8 (77-256)||(254746-254924)
chr8 (77-256)||(660934-661112)
chr8 (19-131)||(18020353-18020465)
chr8 (99-262)||(35458698-35458861)
chr8 (218-267)||(2510494-2510543)
chr8 (77-237)||(846751-846910)
chr8 (110-225)||(17948929-17949044)
chr8 (179-241)||(9552501-9552563)
chr8 (83-145)||(39629158-39629220)
chr8 (83-145)||(39638708-39638770)
chr8 (19-94)||(40691041-40691116)
chr8 (19-68)||(44652731-44652780)
chr8 (165-241)||(40554397-40554473)
[»] chr2 (21 HSPs)
chr2 (80-267)||(9716306-9716493)
chr2 (111-267)||(16054892-16055048)
chr2 (101-267)||(43897988-43898153)
chr2 (83-267)||(5880133-5880316)
chr2 (77-262)||(39848541-39848726)
chr2 (160-267)||(4816726-4816833)
chr2 (77-243)||(16202142-16202308)
chr2 (147-267)||(9730100-9730219)
chr2 (160-262)||(32700587-32700689)
chr2 (134-267)||(38556514-38556647)
chr2 (160-267)||(5442919-5443026)
chr2 (164-262)||(16735032-16735130)
chr2 (163-267)||(1845216-1845320)
chr2 (167-267)||(5712574-5712674)
chr2 (103-248)||(7598853-7598999)
chr2 (175-257)||(10057215-10057297)
chr2 (165-226)||(29037674-29037735)
chr2 (159-247)||(12677840-12677928)
chr2 (191-240)||(37259358-37259407)
chr2 (77-121)||(5712699-5712743)
chr2 (163-225)||(2764246-2764308)
[»] chr6 (15 HSPs)
chr6 (19-241)||(5331269-5331491)
chr6 (76-267)||(24073594-24073784)
chr6 (99-267)||(33247973-33248141)
chr6 (88-267)||(24556654-24556834)
chr6 (76-267)||(10667453-10667644)
chr6 (127-267)||(9952789-9952929)
chr6 (165-259)||(26244338-26244432)
chr6 (115-267)||(33614459-33614611)
chr6 (100-225)||(8351296-8351421)
chr6 (114-261)||(13640730-13640877)
chr6 (103-241)||(5167129-5167267)
chr6 (160-261)||(6248850-6248951)
chr6 (134-248)||(5423086-5423200)
chr6 (176-225)||(2803825-2803874)
chr6 (194-226)||(6228374-6228406)
[»] scaffold0036 (1 HSPs)
scaffold0036 (165-267)||(53062-53164)
[»] scaffold0330 (1 HSPs)
scaffold0330 (77-258)||(11006-11186)
[»] scaffold0373 (1 HSPs)
scaffold0373 (101-257)||(7191-7347)
[»] scaffold0003 (1 HSPs)
scaffold0003 (165-258)||(324970-325063)
[»] scaffold0504 (1 HSPs)
scaffold0504 (125-241)||(11948-12064)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 11432729 - 11432481
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||||||| || |||||||||||||||||| ||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  11432729 aataggctagaccaagctaagctttgtaaggcctgaacctggcctgccaatttttttgaaggcctaagcctggcctacgacctgtcatagacttactttt 11432630  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    ||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11432629 taggcctgagtctgaccttttaaaagcttgatatggtctgttagcctgtttaaaagcctatttcatataaatatctttaaatcagtaatgtgatctaagt 11432530  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11432529 ttaaatagattagcgaactaatatatcaattaaattaaactctcttttg 11432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 6893234 - 6893051
Alignment:
Q  83 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 182  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||||| ||||| | || | |||| ||||||||||||||||||    
T  6893234 taagcctggcctacgacctgtcatatacttactttttaggcatgaatctggccttctgaaagcctgatacggtctgctagcatgtttaaaagcctatttc 6893135  T
Q  183 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||| || || ||||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||| ||||    
T  6893134 atatgaacatttttaaataagcaatgtgatctgagtttaaatagactagcgaact-atatatcaattagattaaactctcttttg 6893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 99 - 260
Target Start/End: Complemental strand, 4576880 - 4576719
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |    | |||||||||||||||||| |||||||| || ||||||||    
T  4576880 cctgtcatagacttactttttaggcctaagtctggccttctaaaagcttgatacggcttgctagcctgtttaaaagcctgtttcatatgaaaatctttaa 4576781  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    || |||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||    
T  4576780 ataagcaatgtgatctaagtttaaatagactaacgaactaatatatcaattagattcaactc 4576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 7912773 - 7912964
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||||||| ||||||| ||   |||||||||||||||||||||| | ||||||| |||||||||||| ||||| || |   || ||| ||||||||     
T  7912773 gaaggcctaagtctggcctgcggtatgtcatagacttactttttaggtccgagtctggccttctgaaagcctgatacgacctactaacctatttaaaagt 7912872  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||| ||| || || ||||| | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  7912873 ctatttcttatgaacatttttaattaagcaatgttatctaagtttaaatagattagcgaactaatatatcaattagattaaactctcttttg 7912964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 22319889 - 22320051
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |  | | || ||||||||||||| |||||||||| ||||| |||||    
T  22319889 cctgtcataggcttactttttaggcctgagtctgaccttctgaaagcctgatacggcctgctaacctgtttaaaagcatatttcatatgaatatgtttaa 22319988  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    || | ||| ||||| |||||||||||||| |||| ||||||||||||||||  ||||||||||    
T  22319989 ataaacaacgtgatataagtttaaatagactagcaaactaatatatcaatttgattaaactct 22320051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 23621127 - 23620961
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||  |||||||||||||||||||||| ||||||| |||||||  || || | |||||||| |||||||| |||| |||||| || || |||||||    
T  23621127 tgtcatatgcttactttttaggcctgagtctaaccttctaaaagctttctacgacctgttagcctatttaaaagtctatatcatatgaacatatttaaat 23621028  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     |||||||||||||||||||||||||| |||| || ||||| |||||||| ||||||||||| ||||    
T  23621027 aagcaatgtgatctaagtttaaatagactagcaaattaatagatcaattagattaaactctcttttg 23620961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 34510363 - 34510465
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 264  Q
    |||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| |    
T  34510363 tgtttaaaagcctatttcatatgaacatctttaaataagcaatgtaatctaagtttaaatagactagcgaactaatatatcaattagattaaactctctt 34510462  T
Q  265 ttg 267  Q
    |||    
T  34510463 ttg 34510465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 55957806 - 55957638
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||  | ||||||||||||||||| ||| |||| ||||||| |||||||| | | |||||||||||||||||||| || ||| || ||||||||    
T  55957806 cctgtcataagcctactttttaggcctgagcctggccttttgaaagcctgatatgacctgctagcctgtttaaaagcctatatcttatgaacatctttaa 55957707  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || | ||||||||||||||||||| | || ||||||| |||||  ||||||| ||||||||||| ||||    
T  55957706 ataaccaatgtgatctaagtttaagtggactagcgaaataatagttcaattagattaaactctcttttg 55957638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 10183549 - 10183739
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||||||||||||||| |||||| |||||| |||||||||| ||||| ||| || |||| ||||| | ||||| |  | | ||||||||||||||      
T  10183549 gaaggcctaagcctggcctgcgacctttcataggcttactttttcggcctaagtttggccttgtgaaaacctgatacggcctgctagcctgtttaaaaat 10183648  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||||||| || ||||||| || ||| |||  ||| |||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  10183649 ctatttcatataaacatttttaaataagtaat-tgagttaaatttaaatagattagcgaactaacatatcaattagagtaaactctcttttg 10183739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 41819556 - 41819318
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||| |||||||||||| |||||||||||| ||| ||||| |||||||       |||||| |||| ||||| | |   ||||||||  |||||||||    
T  41819556 aataggttaggccgagctatgctttgtaaggcttgagcctggcctgccaaatttgttgaaggcataagtctggcatgctgtctgtcatatgcttactttt 41819457  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
     ||| ||||||||| | |||| ||||  ||||| ||   | |||||||||||||  |||||||||||| || |||||||||  | ||||| |||||||||    
T  41819456 aaggtctgagtctggctttctaaaagtctgatacgacatgctagcctgtttaaagacctatttcatatgaacatctttaaa--aacaatgcgatctaagt 41819359  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||| |||| ||||||||||||||||| ||||||||    
T  41819358 ttaaatagactagcaaactaatatatcaattagattaaact 41819318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 101 - 267
Target Start/End: Complemental strand, 30920547 - 30920382
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||  ||||||||||| | |||||||||||||||||||| ||||||||  || |||||  |||||||| |  ||||||||||| | ||||||||||    
T  30920547 tgtcatatgcttactttttaagtctgagtctgaccttctgaaa-cttgatatagtctgttagtttgtttaaaggtttatttcatatagacatctttaaat 30920449  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     || |||| |||||||| ||||||| ||||| |||||||||||||||| | ||||||||||| ||||    
T  30920448 aagtaatgcgatctaaggttaaataaattagtgaactaatatatcaataatattaaactctcttttg 30920382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 12154461 - 12154294
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| ||||||||||||||||||| ||| | |||| ||||| ||||| |  |   ||||||||||||||||||||||||||| || |||||||||    
T  12154461 ctgtcataggcttactttttaggcctgagcctggcattcttaaagcctgatacggccttctagcctgtttaaaagcctatttcatatgaacatctttaaa 12154362  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | | ||||| |||  ||||||||||||  ||| |||||||||  ||| ||| ||||||||||| ||||    
T  12154361 taaacaatgcgattgaagtttaaatagtctagagaactaatagctcagttagattaaactctcttttg 12154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 37666171 - 37666004
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| |||||||||| || ||||||||||| |||||||||  |||||||||  |||||||||||||||   ||||||||||| || || ||||      
T  37666171 ctgtcataggcttactttttcggtctgagtctgacattctgaaagtctgatatgatttgttagcctgtttaaatatctatttcatatgaacatatttacg 37666072  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | ||  ||||||| |||||||||||| | ||  |||| |||||||| |||| ||||||||||| ||||    
T  37666071 taagtcatgtgatttaagtttaaatataatattgaacgaatatatcgattagattaaactctcatttg 37666004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 32519703 - 32519809
Alignment:
Q  161 agcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||||||| |  ||||||||||||  ||||||| ||||| |||||||| |||||||||    
T  32519703 agcctgtttaaaagcctatctcatatgaacatctttaaataagcaatgtggttgaagtttaaatagtctagcgaattaatagatcaattagattaaactc 32519802  T
Q  261 tcctttg 267  Q
    || ||||    
T  32519803 tcttttg 32519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 22749052 - 22749121
Alignment:
Q  82 ctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgata 151  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  22749052 ctaagcctggcctacggcctgtcataggcctactttttaggcctgagtctggccttctgaaagcttgata 22749121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 267
Target Start/End: Complemental strand, 37244235 - 37244078
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    ||||| ||||||||||||| |||||||| ||||| | ||||| || | | || ||||||||||||||||| || ||| || || ||||||| ||||||||    
T  37244235 cttacattttaggcctgagcctgaccttatgaaaacctgatacgacctgataacctgtttaaaagcctatatcttatgaacatttttaaataagcaatgt 37244136  T
Q  210 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||  ||||||||||| | ||| |||| |||| ||||||||  ||||||||| |||||    
T  37244135 gatgcaagtttaaataaactagtgaacaaatagatcaattaggttaaactcttctttg 37244078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 36105730 - 36105837
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||| |||||||||||||||||||||| || || |||||||    ||||||||  ||||||||||||| || ||||||||||||||||| | ||||||||    
T  36105730 tagcgtgtttaaaagcctatttcatatgaacatttttaaatatttaatgtgattcaagtttaaatagactaacgaactaatatatcaatgagattaaact 36105829  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  36105830 ctcttttg 36105837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 40630137 - 40629976
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| |||||||| ||||  | ||||||||||| ||||||||||||| |    | |||||| |||||||||||||||||||| || || ||||||    
T  40630137 ctgtcataggcttactttgtaggttttagtctgaccttttgaaagcttgatacggcttgctagcctttttaaaagcctatttcatatgaacat-tttaaa 40630039  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaact-aatatatcaattaaattaaactct 261  Q
      || ||||||||| |||| |||||  ||||| ||||| ||||||||||| | ||||||||||    
T  40630038 gaagtaatgtgatcaaagtgtaaatgaattagtgaactaaatatatcaatgagattaaactct 40629976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 52973655 - 52973756
Alignment:
Q  147 tgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 246  Q
    |||||||| | | |||| ||||||||| ||||||| || | || |||||||||| || ||||||||||||||| ||||||| ||||||||||||| ||||    
T  52973655 tgatatgacctgatagcttgtttaaaaacctattttatttgaacatctttaaataagtaatgtgatctaagttaaaatagactagcgaactaatagatca 52973754  T
Q  247 at 248  Q
    ||    
T  52973755 at 52973756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 4435353 - 4435275
Alignment:
Q  181 tcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||| || |||||||||| | ||||||||| |||||||||||||| |||| |||||||| |||||||| ||||||||    
T  4435353 tcatatgaacatctttaaataaacaatgtgatataagtttaaatagactagcaaactaatagatcaattagattaaact 4435275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 26660097 - 26660198
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||||| ||||||||||||| |  |||||||||| || ||||||||| ||| ||||||||| ||| || |||||| |||||| | ||||||||    
T  26660097 tagcctgtttaaa-gcctatttcatatgatcatctttaaataagtaatgtgatccaaggttaaatagactagtgagctaataaatcaataatattaaact 26660195  T
Q  260 ctc 262  Q
    |||    
T  26660196 ctc 26660198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 257
Target Start/End: Complemental strand, 6829229 - 6829073
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||||||||||||||||| || || ||  |||| ||||||| ||||  ||   | |||||| |||||||| |||||||||||||| ||||||||||    
T  6829229 tgtcatagacttactttttaggtcttagcctagccttatgaaagcctgattagacttgctagcctatttaaaagtctatttcatataaacatctttaaat 6829130  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
     || |||| |||||||  |||||| || || | | |||||| |||||| | ||||||    
T  6829129 aagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaa 6829073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 43024852 - 43024764
Alignment:
Q  139 tgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaataga 227  Q
    |||||| ||||||||||| |||| ||| ||||||||  | |||||||| ||| ||||||||| |  |||||||||||||||||||||||    
T  43024852 tgaaagtttgatatgatctgttaacctatttaaaagtatgtttcatatgaatttctttaaataaataatgtgatctaagtttaaataga 43024764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 52264294 - 52264375
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||| ||||||| | |||||||||| || |||||| ||| || |||||||| |||||||||||| | |||||||||||||    
T  52264294 tagcctatttaaaaacatatttcatatgaacatctttgaataagtaatgtgatataagtttaaataaactagcgaactaata 52264375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 43588265 - 43588397
Alignment:
Q  116 ttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatcta 215  Q
    |||||||  ||| ||||||||||| |||| ||||||| |   |||||  |||||||||| ||||||||||| || |||||||||| || ||| ||||  |    
T  43588265 ttttaggtatgaatctgaccttctaaaagtttgatatcacatgttagtttgtttaaaagtctatttcatatcaacatctttaaataagtaatctgattga 43588364  T
Q  216 agtttaaatagattagcgaactaatatatcaat 248  Q
    ||| ||||||||  | | |||||||||||||||    
T  43588365 agtctaaatagaccaacaaactaatatatcaat 43588397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 32526372 - 32526455
Alignment:
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    |||||||||| || |  ||||||| || || | ||||||||||||||||||||||| |||||||| |||||| | |||||||||    
T  32526372 tatttcatatgaacaaatttaaataagtaacgcgatctaagtttaaatagattagcaaactaataaatcaataagattaaactc 32526455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 33052101 - 33051989
Alignment:
Q  135 cttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcga 234  Q
    ||||| |||| ||||||||||  ||||| |||||||||||  |||| ||||| ||||| ||||||  || || |||||||||| |||||| || | ||||    
T  33052101 cttctaaaagtttgatatgatttgttagtctgtttaaaagtttattgcatatgaatatttttaaa-aagtaaagtgatctaaggttaaattgactggcga 33052003  T
Q  235 actaatatatcaat 248  Q
    | || |||||||||    
T  33052002 attattatatcaat 33051989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 77 - 267
Target Start/End: Original strand, 45377693 - 45377883
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||||||||||| || | |||||||||||||||||||| |||||||| || |||||||||||| ||||| | || | |||||||||||||||||    
T  45377693 aaggcctaagcctggcctgcggcttgtcatagacttactttttaagcctgagtttggccttctgaaagcctgatacggtctgctagcctgtttaaaagcc 45377792  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  45377793 tatttcatatgaatatctttaaatcaacaatgtgatctaagtgtaaatagactagcgaactaatatatcaattagattaaactctcttttg 45377883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 2758846 - 2759094
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||| |||||||||||| |||||| ||||  ||| ||||| |||||||        ||||||||| ||||||||  ||||||||||||||||||||||    
T  2758846 aataggttaggccgagctaggctttgcaagggttgagcctggcctgccaattttttttaaggcctaatcctggcctgtgacctgtcatagacttactttt 2758945  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||| ||||| ||  |||||| ||||| ||||| ||   | ||||||||||||||||||||||||||| || || ||||||| | |||||||||||||||    
T  2758946 taggtctgagccttgccttctcaaagcctgatacgacatgctagcctgtttaaaagcctatttcatatgaacatatttaaataaacaatgtgatctaagt 2759045  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  2759046 ttaaattgattagcgaactaatatatcaattagattaaactctcttttg 2759094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 4362088 - 4362279
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  |   ||||||||||||||||    
T  4362088 gaaggcctaagcctgacctgcggcctgtcatagacttactttttaggcttgagtctgaccttctgaaagcctgatacggcctactagcctgtttaaaagc 4362187  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||| || || ||||||| ||||||||||| |||||||||||||| ||| | |||||||||| ||||| ||||||||||||||||    
T  4362188 ctatttcatatgaacatttttaaataagcaatgtgatttaagtttaaatagactagtggactaatatataaattagattaaactctcctttg 4362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 16010891 - 16010643
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    ||||||||||||||||||| |||||||||||| |||  |||| |||||||       ||||||||||| ||||  | ||  ||||||||  |||||||||    
T  16010891 aataggctaggccgagctaggctttgtaaggcctgagtctggcctgccaattcttttgaaggcctaagtctggtttgcggtctgtcataagcttactttt 16010792  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||||||||| ||| |||||||||||| ||||| |  | | |||||| |||||||| ||||||||||| || |||||||||||| ||||||||| |||||    
T  16010791 taggcctgagcctggccttctgaaagcctgatacggcctgctagcctttttaaaagtctatttcatatgaacatctttaaatcatcaatgtgatttaagt 16010692  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16010691 gtaaatagactagcgaactaatatatcaattatattaaactctcttttg 16010643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 101 - 259
Target Start/End: Original strand, 30562185 - 30562343
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||  |||||  | | | ||||||||||||||||||||||||||| || ||||||||||    
T  30562185 tgtcataggcttactttttaggcctgcgtctggccttctgaaagtctgatacaacctgctagcctgtttaaaagcctatttcatatgaacatctttaaat 30562284  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
     | |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  30562285 aatcaatgtgatctaagtttaaatagactagcaaactaatatatcaattatattaaact 30562343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 4441388 - 4441201
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    |||||||| |||||| ||||||||||||  | ||| |||||||||||||| || |||||||||||  ||||| | || | ||||||||||||||||||||    
T  4441388 gcctaagcttggcctgcgacctgtcataagcctaccttttaggcctgagtttggccttctgaaagtctgatacggtctgctagcctgtttaaaagcctat 4441289  T
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     || ||| || ||||||||||  | |||||||||||||||||||| || ||| |||||||||  ||||||| ||||||||||| ||||    
T  4441288 atcttatgaacatctttaaatatgaaatgtgatctaagtttaaatggactagtgaactaataattcaattagattaaactctcttttg 4441201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 642885 - 642723
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| | ||||||||| || |||||||| |||||||||||  ||||||  |  |||||||||||||||||||||| || ||| || |||| ||||    
T  642885 ctgtcataggcctactttttatgcttgagtctggccttctgaaagtctgatattgtttgttagcctgtttaaaagcctatatcttatgaacatctctaaa 642786  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    | ||||||||||||||||||||||| || ||| |||||||||  |||||||||||||||||||    
T  642785 taagcaatgtgatctaagtttaaatggactagtgaactaatagttcaattaaattaaactctc 642723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 10158174 - 10158025
Alignment:
Q  112 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 211  Q
    ||||||||||||||||||||| |||||||||||| ||||||||   | | ||||||||||| | |||| || ||| || |||||||||| ||||||||||    
T  10158174 tactttttaggcctgagtctggccttctgaaagcctgatatgacatgcttgcctgtttaaatgtctatatcttattaacatctttaaataagcaatgtga 10158075  T
Q  212 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    |||||||||||||||| |||  ||||||||  ||||||||||||||||||    
T  10158074 tctaagtttaaatagactagtaaactaatagttcaattaaattaaactct 10158025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 90 - 267
Target Start/End: Original strand, 45338978 - 45339155
Alignment:
Q  90 ggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaa 189  Q
    ||||| || |||||||||| | |||||||||| | |||||||| |||| ||||||  ||||| |  |  |||||||||||||||||||||||||||| ||    
T  45338978 ggcctgcggcctgtcataggcatactttttagacatgagtctggccttttgaaagtctgatacggcctattagcctgtttaaaagcctatttcatatgaa 45339077  T
Q  190 tatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     |||||| ||| ||||||  |||||||||||||||||| |||| ||||||||||||||||| |||| |||||| ||||    
T  45339078 catcttttaataagcaatacgatctaagtttaaatagactagcaaactaatatatcaattagattatactctcttttg 45339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 47295849 - 47295746
Alignment:
Q  164 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcc 263  Q
    ||||||||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||     
T  47295849 ctgtttaaaagtctatttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcatttatattaaactctct 47295750  T
Q  264 tttg 267  Q
    ||||    
T  47295749 tttg 47295746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 3839504 - 3839366
Alignment:
Q  122 gcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagttta 221  Q
    |||| ||||||||||||| ||||| ||||| || | | |||||||||||||||||||| || ||| || |||||||||| ||||||||||||||||||||    
T  3839504 gcctaagtctgaccttcttaaagcctgatacgacctgatagcctgtttaaaagcctatatcttatgaacatctttaaataagcaatgtgatctaagttta 3839405  T
Q  222 aatagattagcgaactaatatatcaattaaattaaactc 260  Q
    || | | || ||||||||||  ||||||| |||||||||    
T  3839404 aacaaactaacgaactaatagttcaattagattaaactc 3839366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 267
Target Start/End: Original strand, 51370103 - 51370293
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||| |||| ||||| | || |||||||||| |||||    || |||||||  ||||||||||||||  ||||| |  | | ||||||||| ||||| |    
T  51370103 aaggcttaagtctggcatgcggcctgtcataggcttacaaagtaagcctgagcttgaccttctgaaagtctgatacgtcctgctagcctgttaaaaagtc 51370202  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||| || || ||||||| ||||||||||||||||||||| |||| || ||||| ||||||||||||| ||||||||||| ||||    
T  51370203 tatttcatatgaacatatttaaataagcaatgtgatctaagtttaactagactaacgaacaaatatatcaattagattaaactctcttttg 51370293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 7287380 - 7287248
Alignment:
Q  135 cttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcga 234  Q
    ||||||||||| ||||| | || | |||||||||||||| | ||| || ||| || |||||||||| ||||||||||||||||||||||| || ||  ||    
T  7287380 cttctgaaagcctgatacggtctgctagcctgtttaaaaacatatatcttatgaacatctttaaataagcaatgtgatctaagtttaaatggactaatga 7287281  T
Q  235 actaatatatcaattaaattaaactctcctttg 267  Q
    |||||||  ||||||||||||||||||| ||||    
T  7287280 actaatagttcaattaaattaaactctcttttg 7287248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 27089687 - 27089774
Alignment:
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||| ||||||||| ||| | |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||    
T  27089687 ttcatatgaatatcttttaataaacaatgtgatctaagtttagatagactagcgaactaatatatcaattagattaaactctcttttg 27089774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 6213277 - 6213145
Alignment:
Q  116 ttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatcta 215  Q
    ||||||| |||||||||||||| ||||||||||||||| || |||| ||||||||||| | |||||||||| || || ||||||   | |||||||||||    
T  6213277 ttttaggtctgagtctgaccttttgaaagcttgatatggtctgttaacctgtttaaaaacttatttcatatgaacatttttaaaaatgtaatgtgatcta 6213178  T
Q  216 agtttaaatagattagcgaactaatatatcaat 248  Q
    ||||| ||| || |  |||||||||| ||||||    
T  6213177 agtttcaatcgacttacgaactaatagatcaat 6213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 101 - 260
Target Start/End: Complemental strand, 17391850 - 17391691
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||||||||||||||| || |||||||||| |||||||||  | || || || | ||  ||||||||||  |||||| |||| || ||||||||||    
T  17391850 tgtcatagacttactttttaagcatgagtctgactttctgaaagtctaatgtggtctgctaaactgtttaaaaaactattttatatgaacatctttaaat 17391751  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
     || |||||||| | | ||||||| || || ||||||||||||| ||| |||||||||||    
T  17391750 aagtaatgtgatattaatttaaatggactaacgaactaatatatgaataaaattaaactc 17391691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 267
Target Start/End: Complemental strand, 45756412 - 45756227
Alignment:
Q  82 ctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 181  Q
    ||||| ||||||| || |||||||||| | |||||||| ||  |||||| |||||||||||||  ||||| |  | | |||||| |||||||| |||| |    
T  45756412 ctaagtctggcctgcggcctgtcataggcatactttttgggtttgagtcggaccttctgaaagtctgatacggcctgctagcctatttaaaagtctatat 45756313  T
Q  182 catataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | ||| || || |||||||  |||||||||||||||||||||| || || |||| |||||  || |||| ||||||||||| ||||    
T  45756312 cttatgaacatatttaaatatgcaatgtgatctaagtttaaatggactaacgaattaatagttctattagattaaactctcttttg 45756227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 260
Target Start/End: Complemental strand, 8424643 - 8424476
Alignment:
Q  78 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcct 177  Q
    |||| |||| ||||||| || ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| || | | |||||                 
T  8424643 aggcttaagtctggcctgcggcctgtcatagacttactttttaggcatgagtctgcccttctgaaagcctgatacgacctgctagcc------------- 8424557  T
Q  178 atttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
      ||||||| || |||||||||| | |||||||||| || |||||||||| || ||||||||||||||| ||| |||||||||    
T  8424556 --ttcatatgaacatctttaaataaacaatgtgatcaaaatttaaatagactaacgaactaatatatcagttagattaaactc 8424476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 262
Target Start/End: Complemental strand, 25412466 - 25412322
Alignment:
Q  118 ttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaag 217  Q
    ||||||||||| ||| ||||||||||||  ||||    | |||||||||||||||||| ||| |  ||| || |||||||||| || ||||||||||||     
T  25412466 ttaggcctgagcctggccttctgaaagccggatacagcctgttagcctgtttaaaagcttatattttatgaacatctttaaataagtaatgtgatctaaa 25412367  T
Q  218 tttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    ||||||| || || | ||||||||  |||||||||||||||||||    
T  25412366 tttaaatggactaacaaactaatagttcaattaaattaaactctc 25412322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 259
Target Start/End: Original strand, 28397334 - 28397466
Alignment:
Q  127 agtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 226  Q
    |||||||||||||||||    || |||| | | |||| ||||||||| | ||||||||||||| |||||||||| || |||||  | |||||||||||||    
T  28397334 agtctgaccttctgaaaaacagacatgacctgctagcatgtttaaaaacttatttcatataaaaatctttaaataagtaatgtagtataagtttaaatag 28397433  T
Q  227 attagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||| ||| |||||| | ||||||||    
T  28397434 attagcgaacttatagatcaataagattaaact 28397466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 262
Target Start/End: Original strand, 46998056 - 46998160
Alignment:
Q  158 gttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
    ||||||||||||||||||   |||||||| || |||||| ||| ||||||||||||||||||||||||||  | | || |||||||| ||||| ||||||    
T  46998056 gttagcctgtttaaaagctcgtttcatatgaacatcttttaataagcaatgtgatctaagtttaaatagaccaacaaattaatatattaattagattaaa 46998155  T
Q  258 ctctc 262  Q
    |||||    
T  46998156 ctctc 46998160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 41158217 - 41158050
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| | ||||||||||||||||| |||  |||||||||||   ||| |  | |||||||||||||||||||||  || ||| || ||||| ||     
T  41158217 ctgtcataggcctactttttaggcctgagcctggtcttctgaaagcccaatacggcctgttagcctgtttaaaagcctaaatcttatgaacatcttcaag 41158118  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | | ||||| ||||||||||||||| || ||| ||||| |||  ||||||| ||||||||||| ||||    
T  41158117 taaccaatgagatctaagtttaaatggactagagaacttatagttcaattagattaaactctcatttg 41158050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 266
Target Start/End: Complemental strand, 14346459 - 14346306
Alignment:
Q  113 actttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgat 212  Q
    |||||| |||| ||||| ||||||||||||||  | || ||| | | || ||||||| ||||| ||||||||| ||| |||||||||| || ||||||||    
T  14346459 acttttcaggcatgagtttgaccttctgaaagtctcatgtgacctgctaacctgttttaaagcatatttcataaaaacatctttaaataagtaatgtgat 14346360  T
Q  213 ctaagtttaaatagattagcgaactaatatatcaattaaattaaactctccttt 266  Q
     |||  ||||||||| |||| |||||||| |||| ||   ||||||||||||||    
T  14346359 ttaaagttaaatagactagcaaactaatagatcatttgtgttaaactctccttt 14346306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 29639755 - 29639674
Alignment:
Q  161 agcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatat 242  Q
    ||||| ||||||||| ||| |||||| ||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||    
T  29639755 agcctatttaaaagcatatatcatatgaatatctttaaataaacaatgtgatataagtttaaatagactagcgaattaatat 29639674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 7799201 - 7799316
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    ||||||| |||| || || |||||||||| |||||||||| ||| |||| |||||||||||||||| |||||  | | | ||||||||||||||||||||    
T  7799201 gcctaagactggtctgcggcctgtcataggcttactttttgggcatgagcctgaccttctgaaagcctgata-cagctgctagcctgtttaaaagcctat 7799299  T
Q  180 ttcatataaatatcttt 196  Q
    || |||| || ||||||    
T  7799300 tttatatgaacatcttt 7799316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 267
Target Start/End: Complemental strand, 23757459 - 23757285
Alignment:
Q  92 cctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaata 191  Q
    |||||||||||| ||||||||  ||||||||| || ||| |||||| ||||| |  ||||||  |   ||||||||||||||  |||||| |||| || |    
T  23757459 cctacgacctgtgatagacttg-tttttaggcatgtgtccgaccttatgaaaacccgatatggcctaatagcctgtttaaaaatctattttatatgaaca 23757361  T
Q  192 tctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||| |  |||||| |||||||||||||| | ||||||||||||| || ||| | | ||||||||| ||||    
T  23757360 tctttaaataatgaatgtggtctaagtttaaataaactagcgaactaatagataaatgagactaaactctcatttg 23757285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 267
Target Start/End: Original strand, 39737195 - 39737378
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||| ||||| | || |||||||||  ||||| |||||||| ||| |||| |||||||||||| ||||| || | | ||| |||||||||||||    
T  39737195 aaggcctaagtctggcatgcggcctgtcatatgcttaccttttaggcatgactctggccttctgaaagcctgatacgacctgctagtctgtttaaaagcc 39737294  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||    ||||   |   ||||  | |||||||| ||||||||||||||||| || | ||| ||||||||||||| ||||||||||| ||||    
T  39737295 ta----atat---ttcatttacgtaagcaatgtaatctaagtttaaatagactaacaaacaaatatatcaattagattaaactctcttttg 39737378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 11751756 - 11751654
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 264  Q
    ||||||||||| ||| |  ||| || ||||||| || | ||||||||||||||||||||||||  ||| |||||||| |||||||| ||||||||||| |    
T  11751756 tgtttaaaagcttatatgttatgaacatctttacataaacaatgtgatctaagtttaaatagaccagcaaactaatagatcaattagattaaactctctt 11751657  T
Q  265 ttg 267  Q
    |||    
T  11751656 ttg 11751654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 196
Target Start/End: Complemental strand, 1826603 - 1826495
Alignment:
Q  88 ctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata 187  Q
    ||||| |||| |||||||||| ||||||||||||||||||| |||||||| ||||||| |  || |    | ||||||||||||||| |||||| ||||     
T  1826603 ctggcatacggcctgtcataggcttactttttaggcctgagcctgaccttatgaaagcctcgtacggcttgctagcctgtttaaaagtctattttatatg 1826504  T
Q  188 aatatcttt 196  Q
    |||||||||    
T  1826503 aatatcttt 1826495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 224
Target Start/End: Original strand, 3022574 - 3022697
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    ||||||||||||| |||||||| |||| |  ||| |||| ||||| |||| ||    | || |||||||||||| ||| ||||||| || ||||||||||    
T  3022574 tgtcatagacttattttttaggtctgaattcgacattctaaaagcctgatgtggcatgctaacctgtttaaaagtctacttcatatgaacatctttaaat 3022673  T
Q  201 cagcaatgtgatctaagtttaaat 224  Q
     |||||||||||| ||||||||||    
T  3022674 aagcaatgtgatcgaagtttaaat 3022697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 248
Target Start/End: Complemental strand, 4402416 - 4402245
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||  ||||| | ||| ||||||||| ||||||||| ||  |||||| || | ||||||||  ||||||||||| | ||||||||||||||| |    
T  4402416 aaggcctaactctggcatgcgatctgtcataggcttacttttcagatctgagtttggctttctgaaaatttgatatgatctgctagcctgtttaaaagtc 4402317  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 248  Q
    || ||| ||| || || ||||||  || |||||||  |||| ||||||| | || | |||||||| ||||||    
T  4402316 taattcgtatgaacatttttaaacaagtaatgtgaaataaggttaaataaactaacaaactaataaatcaat 4402245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 20953031 - 20953094
Alignment:
Q  204 caatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||| |||||||||||||||||||||  |||||||||||||||| ||| ||||||| ||||    
T  20953031 caatgtggtctaagtttaaatagattagcagactaatatatcaattagattgaactctcttttg 20953094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 22863163 - 22863323
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||  |||||||||||| |||||||||| |||| ||||||  ||||  |  | | |||| ||||||||||  ||||| |||| || |||||||||    
T  22863163 ctgtcataagcttactttttagacctgagtctggccttatgaaagtctgattaggcctgctagcttgtttaaaagtttattttatatgaacatctttaaa 22863262  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    | || ||||  ||  ||| |||||||||| |||||||||||| |||||| | |||||||||||    
T  22863263 taagtaatg--atacaaggttaaatagatcagcgaactaatagatcaatgatattaaactctc 22863323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 756530 - 756461
Alignment:
Q  188 aatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
    ||||||||||||| | |||| |||| ||||||||||||||||| | || ||||| |||||| ||||||||    
T  756530 aatatctttaaattaacaatatgatataagtttaaatagattaacaaattaatagatcaatgaaattaaa 756461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 37696801 - 37696700
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||| ||||| |||||||||||||| |||||| | |||| ||||||||||| || | ||||  |||||||||||| ||| || ||| || || |||||    
T  37696801 cctgtcgtagacctactttttaggcctaagtctggctttctaaaagcttgatacgacctgttaatctgtttaaaagcatatatcttatgaacatttttaa 37696702  T
Q  199 at 200  Q
    ||    
T  37696701 at 37696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 1825293 - 1825226
Alignment:
Q  189 atatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
    |||||||| ||| |||||||| ||| || ||||||||||||||||||||||| |||| |||| ||||||    
T  1825293 atatcttttaataagcaatgtaatc-aactttaaatagattagcgaactaatttatctattagattaaa 1825226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 35718394 - 35718494
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||| |||||||||| |||||||||||| | |||| || || |  || ||||||||||||| ||| || ||  |||||||||||||| | ||||||||||    
T  35718394 tagcttgtttaaaagtctatttcatatagacatctctagataattaacgtgatctaagtttcaatcgactaatgaactaatatatcattgaaattaaact 35718493  T
Q  260 c 260  Q
    |    
T  35718494 c 35718494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 207
Target Start/End: Original strand, 6135915 - 6136018
Alignment:
Q  104 catagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcag 203  Q
    ||||||||||| ||| ||| |||| |||| | || ||||||  || ||||| | | || ||| |||||||||||||||||||| || |||||||||| ||    
T  6135915 catagacttacatttcaggtctgaatctggcgttttgaaagtctggtatgacctgctatcctatttaaaagcctatttcatatgaacatctttaaataag 6136014  T
Q  204 caat 207  Q
    ||||    
T  6136015 caat 6136018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 28397268 - 28397308
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctg 59  Q
    |||||||||||||||||||| ||||||||||| ||| ||||    
T  28397268 aataggctaggccgagctaacctttgtaaggcctgagcctg 28397308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 100 - 267
Target Start/End: Original strand, 25685208 - 25685375
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| || |   ||||||||||||||||||||||||||| ||||| ||||||    
T  25685208 ctgtcatagacttactttttaggtctgggtctggccttctgaaagcttgatacgacctactagcctgtttaaaagcctatttcatatgaatatatttaaa 25685307  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  25685308 taagcaatatgatctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 25685375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 19 - 256
Target Start/End: Complemental strand, 41016088 - 41015852
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    ||||||||| |||||||||||||||| ||||| ||| ||||  |||||||       ||||||||||||||||||| || |||||||||| |||||||||    
T  41016088 aataggctaagccgagctaagctttggaaggcctgagcctgacctgccaacttttttgaaggcctaagcctggcctgcggcctgtcataggcttactttt 41015989  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||||||||||||| |||| ||||||  |||||||  |   |||| ||||||||||| ||||| |||| || |||||| | |||||||||||||||||||    
T  41015988 taggcctgagtctggccttatgaaagtctgatatggcctactagcatgtttaaaagcatattttatatgaacatcttt-agtcagcaatgtgatctaagt 41015890  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaa 256  Q
    ||||||||| || |||||||||||||||||||||||||    
T  41015889 ttaaatagactaacgaactaatatatcaattaaattaa 41015852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 267
Target Start/End: Complemental strand, 32555965 - 32555774
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||| ||| ||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| | || | ||||||||||||||||    
T  32555965 gaaggccaaagtctggcatgcgacctgtcataggcttactttttaggcttgagtctgaccttctgaaagcctgatacggtctgctagcctgtttaaaagc 32555866  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || ||| |||| || || ||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||| ||| ||||||| ||||    
T  32555865 ctgttttatatgaacatttttaaataagcaatgtgatctaagtttaaatagactagtgaacaaatatatcaattagatttaactctcttttg 32555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 97 - 267
Target Start/End: Original strand, 5034004 - 5034174
Alignment:
Q  97 gacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatcttt 196  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||| ||||| | |  | | ||||||||||||||||||||||||| || || |||    
T  5034004 gacctgtcacaggcttactttttaggcctgagtctgaccttctgaaagcctgatacggtatgcttgcctgtttaaaagcctatttcatatgaacatattt 5034103  T
Q  197 aaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||| ||||||||  |||||||||| ||||    
T  5034104 aaataagcaatgtgatcaaagtttaaatagactagcgaactaatagatcaattaggttaaactctcttttg 5034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 42672655 - 42672842
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    |||||| ||| |||| || |||||||||| |||||||||||||| |||| ||| |||||||||||| ||||| |  | | || | ||||||||||| | |    
T  42672655 gcctaaacctagcctgcggcctgtcataggcttactttttaggcatgagcctggccttctgaaagcctgatacggcctgctaacttgtttaaaagcttgt 42672754  T
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||| || ||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  42672755 ttcatatcaacatcttaaaataagcaatgtgatataagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 42672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 9271037 - 9271230
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcataga--cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaa 173  Q
    ||||||||||||||||||| || ||| ||||| |  |||||||||||||| |||||||||||||| |||| | ||||| |  | | || ||||||||||     
T  9271037 gaaggcctaagcctggcctgcggcctatcatataggcttactttttaggcttgagtctgaccttccgaaatcctgatacggcctgctaacctgtttaaag 9271136  T
Q  174 gcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||||| || |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||| ||||| |||||| |||| ||||    
T  9271137 gcctatttcatatgaacatctttaaataagcaatgtgatctaggtttaaatagactagcgaactaaaatattaattagattaaaatctcttttg 9271230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 32420187 - 32420435
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnn-gaaggcctaagcctggcctacgacctgtcatagacttacttt 117  Q
    ||||||||||||||||||| |||||| ||||| | | ||||| |||||||        ||| || || ||||||| | || |||||||||| ||| ||||    
T  32420187 aataggctaggccgagctaggctttgcaaggcctaagcctggcctgccaatttttgatgaatgcataggcctggcttgcggcctgtcataggcttgcttt 32420286  T
Q  118 ttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaag 217  Q
    |||||||| |||||| |||||||||||| | ||| |  | | |||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||    
T  32420287 ttaggcctaagtctggccttctgaaagcct-atacggcctgctagcctgtttaaaagcctatatcatataaacatttttaaataagcaatgtgatctaag 32420385  T
Q  218 tttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||| | | |||| ||||||||||||||||  ||||||||||| ||||    
T  32420386 tttaaacaaactagcaaactaatatatcaattggattaaactctcttttg 32420435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 101 - 267
Target Start/End: Original strand, 39727153 - 39727319
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||| ||| |||||||||| ||||| |  | |||||||||| ||||||| || | |||||||||||||||||||||| |||| |  || |||||||    
T  39727153 tgtcataggctttctttttaggcatgagtatagctttctgaaagcctgatatggtctgctagcctgtttaaaagcctattttatatgagcatatttaaat 39727252  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  39727253 gagcaatgttatctaagtttaaatagactagcgaactaatatatcaattagattaaattctcttttg 39727319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 255
Target Start/End: Complemental strand, 18331011 - 18330833
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||||||||||| || | ||||||| |||||||||||||||||||||||||  ||  ||||||||||  || || || | | |||||||||||||||||    
T  18331011 aaggcctaagcctagcatgcgacctgacatagacttactttttaggcctgagcttggtcttctgaaagtctgttacgacctgctagcctgtttaaaagcc 18330912  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaatta 255  Q
    ||| |||||| || |||||||||| | ||||||||| ||||||||||||||| ||| ||| |||| |||||||| ||||    
T  18330911 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaatagatcagccaaccaataaatcaattagatta 18330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 40727343 - 40727175
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| | ||||||||||| | |||||||  ||||| ||||||||||| | || |||| | ||||||||||||||| |  ||| || ||||||||    
T  40727343 cctgtcataggcctactttttaggtccgagtctggtcttctaaaagcttgatacggtctgttaacatgtttaaaagcctatattttatgaacatctttaa 40727244  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || ||||||||||||||||||||||| || || ||||||||||  ||||||||||||||||||| ||||    
T  40727243 ataagcaatgtgatctaagtttaaatggactaacgaactaatagttcaattaaattaaactctcttttg 40727175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 267
Target Start/End: Original strand, 9479205 - 9479368
Alignment:
Q  104 catagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcag 203  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||| | ||| | || | |||| ||||||||||  |||||||||| || || ||||||| ||    
T  9479205 cataggcttacattttaggcatgagtctgaccttttgaaagccttatacggtctgctagcatgtttaaaagaatatttcatatgaacatatttaaataag 9479304  T
Q  204 caatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||| |||||| ||||||||||| ||||  ||||||||||||||||  ||||| |||| ||||    
T  9479305 caatgcgatctatgtttaaatagactagctgactaatatatcaattagtttaaattctcttttg 9479368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 34654044 - 34653942
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 264  Q
    |||||||||| |||||| || | ||||| ||||||| || |||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||| |    
T  34654044 tgtttaaaagtctatttaatgtgaatatatttaaataagtaatgtgatctaattttaaatagactagcgaactaatatatcaatgagattaaactctctt 34653945  T
Q  265 ttg 267  Q
    |||    
T  34653944 ttg 34653942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 25072577 - 25072762
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||||||||||||| || || | | |||||  |||||||||||||| | ||||||||||| |||| |  ||||  |  | | |||||||||||||| ||    
T  25072577 aaggcctaagcctggtctgcggcatatcatatgcttactttttaggcttaagtctgaccttatgaaggtctgattaggcctgctagcctgtttaaaatcc 25072676  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||||||| || |||||||||| || ||||||||  ||| ||||||||| || ||| |||||| |||||| | |||||||||||    
T  25072677 tatttcatatgaacatctttaaataagtaatgtgattcaaggttaaatagactaacgagctaatagatcaatgatattaaactctc 25072762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 259
Target Start/End: Complemental strand, 41937967 - 41937807
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| | |||||||||| |||||||||| ||||||||||| || ||| ||   ||||| ||||||||||||  || || ||| || ||||||||    
T  41937967 cctgtcataggcctactttttagccctgagtctggccttctgaaagtttaatacgacatgttagtctgtttaaaagctcatatcttatgaacatctttaa 41937868  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    || | ||||| ||| |||||||||||||| ||| || ||||||  ||||||| ||||||||    
T  41937867 ataaacaatgcgatttaagtttaaatagactagagatctaatagttcaattatattaaact 41937807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 267
Target Start/End: Complemental strand, 42766779 - 42766622
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    |||| ||||||| ||||  |||| |||||| ||||  ||||||| || | ||| |||||| ||||  |||| ||||| ||||||||||||| || ||  |    
T  42766779 cttattttttagacctgcatctggccttctaaaagtctgatatggtctgctagtctgtttgaaagtttattacatatgaatatctttaaataagtaaatt 42766680  T
Q  210 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||| ||||||||| |||||||||| ||||||||| | ||||| ||||||||||    
T  42766679 gatctaaggttaaatagactagcgaactattatatcaatgagattaatctctcctttg 42766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 260
Target Start/End: Complemental strand, 22166239 - 22166057
Alignment:
Q  78 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaag-cttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||| |||| || ||| ||||| ||||||||||||| |||||| ||||||||||| | |   ||||| || | | ||| | |||||| || |||||| ||    
T  22166239 aggcataagtcttgccgacgacttgtcatagacttattttttaagcctgagtctggcatgtcgaaagtctggttttga-ctgttagcttggttaaaatcc 22166141  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||| |||  | || |||||||||| ||||||||||||||||||    
T  22166140 tatttcatataaacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactc 22166057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 260
Target Start/End: Complemental strand, 22224946 - 22224764
Alignment:
Q  78 aggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaag-cttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||| |||| || ||| ||||| ||||||||||||| |||||| ||||||||||| | |   ||||| || | | ||| | |||||| || |||||| ||    
T  22224946 aggcataagtcttgccgacgacttgtcatagacttattttttaagcctgagtctggcatgtcgaaagtctggttttga-ctgttagcttggttaaaatcc 22224848  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    ||||||||||||| |||||||||| |  |||||||| ||||||| |||  | || |||||||||| ||||||||||||||||||    
T  22224847 tatttcatataaacatctttaaataaataatgtgatttaagttttaatcaactaacgaactaatagatcaattaaattaaactc 22224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 261
Target Start/End: Complemental strand, 21144707 - 21144543
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata--aatatcttt 196  Q
    |||||||||| | |||||||||||| ||||| |||||||||||||| |||||| |    | || | |||||||||| |||| |  ||||  || ||||||    
T  21144707 cctgtcataggcctactttttaggcatgagtttgaccttctgaaagtttgatacggcatgctaacatgtttaaaagtctatatgttatatgaacatcttt 21144608  T
Q  197 aaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    ||||    |||||||| |||||||||||||| ||| ||||||||| |||||||| ||||||||||    
T  21144607 aaatacttaatgtgatataagtttaaatagactagtgaactaatagatcaattagattaaactct 21144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 22541181 - 22541286
Alignment:
Q  111 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 210  Q
    ||||||||||| || |||| | ||| | ||||||   ||||||||| ||||| ||||||||||  ||||||||||| ||||||||||||| |  ||||||    
T  22541181 ttactttttagacccgagttttaccatttgaaagtcagatatgatctgttagtctgtttaaaaatctatttcatatgaatatctttaaataaataatgtg 22541280  T
Q  211 atctaa 216  Q
    ||||||    
T  22541281 atctaa 22541286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 44073610 - 44073529
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||||||||||| | |||||||||| ||||| ||||||| || ||| |||| | ||||| |||||| |||||||||||||    
T  44073610 tagcctgtttaaaaacatatttcatatgaatatttttaaataagtaatatgatatgagtttgaatagaatagcgaactaata 44073529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 267
Target Start/End: Original strand, 38566540 - 38566699
Alignment:
Q  105 atagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagc 204  Q
    ||||||||||||||||||| ||||||||||||||| ||||  |   ||||   | |||  |||||||||  ||||||||||| ||   | |||||| ||     
T  38566540 atagacttactttttaggcatgagtctgaccttctaaaagtctctcatgagttgctagtttgtttaaaaatctatttcatatgaa---cattaaataagt 38566636  T
Q  205 aatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | |||||||||| ||||||||||||  | |||||||| |||||| | ||||||||||| ||||    
T  38566637 attgtgatctaaatttaaatagattgtctaactaatagatcaatgagattaaactctcttttg 38566699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 39725444 - 39725524
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 181  Q
    ||||| || |||||||||||||| ||||| |  |||||||||||| ||||| | || |||||| |||||||||||||||||    
T  39725444 tgtcacaggcttactttttaggcatgagtatagccttctgaaagcctgatacggtctgttagcatgtttaaaagcctattt 39725524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 28032113 - 28032058
Alignment:
Q  169 taaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 224  Q
    |||||||||||||||| | || |||||||||| ||||||||| |||||||||||||    
T  28032113 taaaagcctatttcatgtgaacatctttaaataagcaatgtgttctaagtttaaat 28032058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 246
Target Start/End: Complemental strand, 37155714 - 37155631
Alignment:
Q  163 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 246  Q
    |||||||||||||||||||||||  || |||||||||| || ||| ||||| ||| ||||||||| || ||| |||||| ||||    
T  37155714 cctgtttaaaagcctatttcatacgaacatctttaaataagtaatatgatccaaggttaaatagactaacgagctaatagatca 37155631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 262
Target Start/End: Complemental strand, 29171757 - 29171597
Alignment:
Q  104 catagacttactttttaggcctgagtctgaccttctgaaagcttga-tatgatccgttagcctgtttaaaagcctatttcatat--aaatatctttaaat 200  Q
    |||| |||||||||||||| |||||||||||||| ||||||| | | |||| || | |||  ||||||||||||||||||||||  | |||| |||||||    
T  29171757 cataaacttactttttaggtctgagtctgaccttatgaaagcctcattatg-tctgctagtatgtttaaaagcctatttcatatgaacatatatttaaat 29171659  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
     || || ||||||  |  ||||||||| |||||| |||||| ||| |  | |||||||||||    
T  29171658 aagtaacgtgatcccaagttaaatagactagcgagctaataaatcgacgatattaaactctc 29171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 32684169 - 32684271
Alignment:
Q  125 tgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 224  Q
    ||||| ||||||  |||||| || |||||||| | || ||||||||||||| |||||||||| |   ||||||||| |  |||||||||||| |||||||    
T  32684169 tgagtttgacctattgaaagtttcatatgatctgctatcctgtttaaaagcatatttcatatgaccgtctttaaataaataatgtgatctaaatttaaat 32684268  T
Q  225 aga 227  Q
    |||    
T  32684269 aga 32684271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 39723574 - 39723654
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctattt 181  Q
    |||||||| |||||||||||||| ||||| |  |||||||||||| ||||| | || | |||| | |||||||||||||||    
T  39723574 tgtcataggcttactttttaggcatgagtatagccttctgaaagcctgatacggtctgctagcatatttaaaagcctattt 39723654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 18793580 - 18793680
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    |||||||||||||||||||||||  ||||  ||  ||||||||||| ||||||| |  ||||  || ||||||||| |||| ||||| || || ||||||    
T  18793580 ctgtcatagacttactttttaggtttgagattggtcttctgaaagcctgatatggtatgttaatctatttaaaagcttattgcatatgaacatatttaaa 18793679  T
Q  200 t 200  Q
    |    
T  18793680 t 18793680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 18879741 - 18879693
Alignment:
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||| || || ||||||||||  ||||||||||||||||||||||||    
T  18879741 ttaaatggactaacgaactaatagttcaattaaattaaactctcctttg 18879693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 36439748 - 36439996
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||| ||||||||| || |||||| ||||| ||| |||| |||| |||       ||||| ||||| |||| || ||  |||||||| ||||||||||    
T  36439748 aataggttaggccgagttaggctttgcaaggcctgagcctgatctgtcaaattttatgaaggactaagtctggtctgcggtctgtcataaacttactttt 36439847  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||| |||||||| |||||||||||| |||||| | || | |||||||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  36439848 taggtctgagtctaaccttctgaaagtttgatacggtctgctagcctgtttaaaagcatatttcatataaacatctttaaataagcaatgttatctaagt 36439947  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||| || |||||||||||||||| || ||||||||||| ||||    
T  36439948 ttaaatagactaacgaactaatatatcaaatagattaaactctcttttg 36439996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 83 - 267
Target Start/End: Complemental strand, 40202055 - 40201871
Alignment:
Q  83 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 182  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||| |||||||||||  ||||| | |  | ||| ||||||||||| |||||||    
T  40202055 taagcttggcctgcggcctgtcatagacttactttttaggcctgagtctggccttctgaaagtctgatacggtatgctagtctgtttaaaagtctatttc 40201956  T
Q  183 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || | || |||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||| ||||    
T  40201955 atttcaacatcttttaataagcaatgtgatctaagtttaaatagactagcaaactaatatatcaattagattgaactctcttttg 40201871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 100 - 261
Target Start/End: Complemental strand, 6391652 - 6391491
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||||||||||||||||||||||||| | |||||||||||  ||||| |    | |||||| |||||  ||||||||||||| || |||||||||    
T  6391652 ctgtcatagacttactttttaggcctgagtcaggccttctgaaagtctgatacggcttgctagcctatttaacggcctatttcatatgaacatctttaaa 6391553  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  6391552 taagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaactct 6391491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 99 - 267
Target Start/End: Original strand, 35319211 - 35319379
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||  ||||| |  | | ||||||||||||||||||  |||| ||||| || |||||    
T  35319211 cctgtcataggcttactttttaggcctgagtctgaccttttgaaagtctgatacggcctgctagcctgtttaaaagcctgcttcagataaacatatttaa 35319310  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||| ||||    
T  35319311 ataagcaatgtgatctaagtttaaatagactagggaactaatatatcaattagattaaagtctcttttg 35319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 40417541 - 40417402
Alignment:
Q  111 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 210  Q
    ||||||||||||| ||| |||||| |||||||||| ||||| | || | || |||||||||||||||||||||||| || |||||||||| |||||||||    
T  40417541 ttactttttaggcatgaatctgacattctgaaagcctgatacggtctgctaacctgtttaaaagcctatttcatatgaacatctttaaataagcaatgtg 40417442  T
Q  211 atctaagtttaaatagattagcgaactaatatatcaatta 250  Q
    ||| ||||||||||||| ||| ||||||||||||||||||    
T  40417441 atcgaagtttaaatagactagtgaactaatatatcaatta 40417402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 267
Target Start/End: Complemental strand, 28207546 - 28207357
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||| |||||||||| || || |||||||||| | |||||||||||||||||  |||||||||||||||  |||| || | | ||||||||||||||| |    
T  28207546 aaggtctaagcctggtctgcggcctgtcataggcctactttttaggcctgagcttgaccttctgaaagccagatacgacctgctagcctgtttaaaagtc 28207447  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||| |  ||| || || ||||||| ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||| ||||    
T  28207446 tatatt-tatgaacatttttaaataagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattaaattaaactctcttttg 28207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 76 - 262
Target Start/End: Original strand, 40514657 - 40514844
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    |||||||||| ||||  ||||| | ||||||| |||||| ||||||| ||||| |||||||||||||||  ||||||| || | ||| ||||||||||||    
T  40514657 gaaggcctaaacctgatctacggcttgtcatatacttacattttaggtctgagcctgaccttctgaaagtctgatatggtctgctagtctgtttaaaagc 40514756  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtg--atctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    | ||||||||| || |||||||||| | |||||||  || |||||||||||| | ||||||| |||||||||||||| |||||||||||    
T  40514757 c-atttcatatgaacatctttaaataaacaatgtgatatttaagtttaaatatactagcgaagtaatatatcaattagattaaactctc 40514844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 76 - 259
Target Start/End: Complemental strand, 8570461 - 8570278
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    |||||||||||  || | | ||||||||||||  ||||||||| |||| ||| |||  | |||||||||||| |||||||| | |||||||||||||| |    
T  8570461 gaaggcctaagtttgacatgcgacctgtcatatgcttacttttaaggcatgaatcttgctttctgaaagcttaatatgatctgctagcctgtttaaaaac 8570362  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||| ||  | ||||||| || |||||||||||| |||||||||| || | ||||||||||||||||| ||||||||    
T  8570361 ctatttcatatgaacgtatttaaataagtaatgtgatctaaatttaaatagactaacaaactaatatatcaattagattaaact 8570278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 111 - 250
Target Start/End: Original strand, 39981544 - 39981683
Alignment:
Q  111 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 210  Q
    ||||||||||||| |||||||| | |||||||||| ||||| |  | | || |||||||||||||||||||||||| || || ||||||| |||||||||    
T  39981544 ttactttttaggcatgagtctggcattctgaaagcctgatacggcctgctaacctgtttaaaagcctatttcatatgaacatatttaaataagcaatgtg 39981643  T
Q  211 atctaagtttaaatagattagcgaactaatatatcaatta 250  Q
    ||| ||||||||||||| ||| ||||||||||||||||||    
T  39981644 atcgaagtttaaatagactagtgaactaatatatcaatta 39981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 267
Target Start/End: Original strand, 42108442 - 42108599
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    |||||||||||||| ||||| || |||||||||||| | ||| |    ||||||||||||||||| || |||  ||| || |||||||||| |||||| |    
T  42108442 cttactttttaggcttgagtttggccttctgaaagcctaatacggcatgttagcctgtttaaaagtctgttttgtattaacatctttaaataagcaatat 42108541  T
Q  210 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  42108542 gatccaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 42108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 28022690 - 28022816
Alignment:
Q  136 ttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaa 235  Q
    ||||||||| ||||||| ||  | ||||||||||||||| |||| |||||| || |||||||||| |||||||||||||||||| |||||||||||||||    
T  28022690 ttctgaaagtttgatataattggatagcctgtttaaaagtctatatcatatgaacatctttaaataagcaatgtgatctaagttaaaatagattagcgaa 28022789  T
Q  236 ctaatatatcaattaaattaaactctc 262  Q
    |||||  ||||| || |||||||||||    
T  28022790 ctaattgatcaactagattaaactctc 28022816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 333637 - 333774
Alignment:
Q  130 ctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagatt 229  Q
    |||||||||||||||| | ||| || | | |||||||||||||||||||| || ||| |||| |||||||| ||||||||||||||| ||||||| || |    
T  333637 ctgaccttctgaaagcctaatacgacctgctagcctgtttaaaagcctatatcttatgaatacctttaaataagcaatgtgatctaaatttaaatggact 333736  T
Q  230 agcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||||  ||||||| ||||||||||| ||||    
T  333737 agcgaactaatagttcaattagattaaactctcttttg 333774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 12580320 - 12580153
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||| | ||||||||| | |||||  ||||||||||||||  |||||   ||   |||||||| ||||||||||| || ||| || |||||||||    
T  12580320 ctgtcataggcctactttttaagtctgagcatgaccttctgaaagtctgatacagtctactagcctgtctaaaagcctatatcttatgaacatctttaaa 12580221  T
Q  200 tcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | ||||||||||||||||||||||| || |||||||||||||  ||||||| ||||||||||| ||||    
T  12580220 taagcaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaactctcttttg 12580153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 16885344 - 16885531
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    ||||||| ||||| | || |||||||||  | ||||||||| || |||||||| |||||||||||| ||||| |  | |  |||||||||||||| ||||    
T  16885344 gcctaagtctggcttgcggcctgtcatatgcctactttttatgcatgagtctggccttctgaaagcctgatacggcctgcgagcctgtttaaaagtctat 16885443  T
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     || ||| || |||||||||| |||||||| |||||||||||||| ||  ||||||||||||  ||||||| ||||||||||| ||||    
T  16885444 atcttatgaacatctttaaataagcaatgtaatctaagtttaaatggaccagcgaactaatagttcaattagattaaactctcttttg 16885531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 261
Target Start/End: Original strand, 29570964 - 29571138
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    |||||| |||| ||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||| ||||| |  | | ||||  ||||||||||    
T  29570964 gaaggcttaagtctggcctacggtctgtcatagacttactttttaggcctgaacctgaccttctgaaagcctgatacgggctgctagctcgtttaaaagc 29571063  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    |||||| |||| || ||||| |||| |||||           |||||||||| |||||||||||||||||||||| ||||||||||    
T  29571064 ctattttatatgaacatcttcaaataagcaa-----------tttaaatagactagcgaactaatatatcaattagattaaactct 29571138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 267
Target Start/End: Complemental strand, 41387118 - 41386971
Alignment:
Q  120 aggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtt 219  Q
    |||||| || |||||||| ||||||| |||||||    |  ||||||||||||||| |||||||||| || ||||||| || ||||| ||||| ||||||    
T  41387118 aggcctaagcctgaccttgtgaaagcctgatatggcttgcaagcctgtttaaaagcttatttcatatgaacatctttatataagcaaagtgatataagtt 41387019  T
Q  220 taaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||| |||||||||||||||||||||| || |||||||| ||||    
T  41387018 taaatagactagcgaactaatatatcaattagatcaaactctcttttg 41386971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 267
Target Start/End: Original strand, 15530002 - 15530168
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||| | |||||||||||||||||  || ||||| |||||  ||||| | || | |||||||||||||||||||| || ||| || ||||||||||    
T  15530002 tgtcataggcctactttttaggcctgagcttggccttccgaaagtctgatacggtctgctagcctgtttaaaagcctatatcttatgaacatctttaaat 15530101  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     | ||||||||||||| ||||||| || | |||||||||||  ||||||| ||||||||||| ||||    
T  15530102 aaacaatgtgatctaaatttaaatggactggcgaactaatagttcaattagattaaactctcttttg 15530168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 19298272 - 19298104
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatcttt-aa 198  Q
    |||| |||| |||| ||||||||| | ||||||||||||||||||  ||||| |    | ||||||||||||||||||||||  ||| || || ||| ||    
T  19298272 ctgtgataggcttattttttaggcttaagtctgaccttctgaaagtctgatacgtcttgctagcctgtttaaaagcctatttagtatgaacattttttaa 19298173  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || |||||||||||||||||||||||||| || | |||||||||||||| || ||||||||||| ||||    
T  19298172 ataagcaatgtgatctaagtttaaatagactacctaactaatatatcaactagattaaactctcttttg 19298104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 17743049 - 17742945
Alignment:
Q  158 gttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
    ||||| |||||||||||| || ||||||| |||||||||  || ||||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||||    
T  17743049 gttagtctgtttaaaagcataattcatatgaatatcttttgataagcaatgtgatttaagtttcaatagactagcaaactaatatatcaattagattaaa 17742950  T
Q  258 ctctc 262  Q
    |||||    
T  17742949 ctctc 17742945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 16844658 - 16844557
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||| ||| || ||| || |||||||||| || |||||||||||||||||||| || |||||||||||||  ||||||| ||||||||    
T  16844658 tagcctgtttaaaagcatatatcttatgaacatctttaaataagaaatgtgatctaagtttaaatggactagcgaactaatagttcaattagattaaact 16844559  T
Q  260 ct 261  Q
    ||    
T  16844558 ct 16844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 267
Target Start/End: Complemental strand, 22859866 - 22859698
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||  |  | | |||| | ||||||| |||||||||||| || ||||||||    
T  22859866 cctgtcatagacttactttttaggtctgagtctggccttatgagagcctgattaggcctgctagcatttttaaaaacctatttcatatgaacatctttaa 22859767  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || || || |||||| ||| ||||| ||| || ||| |||||| |||||| | ||||||||||| ||||    
T  22859766 ataagtaaggtgatccaaggttaaaaagactaacgagctaatagatcaatgatattaaactctcttttg 22859698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 261
Target Start/End: Original strand, 38876548 - 38876700
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    ||||||||||||| || | || | |||||||||||  ||||| | |  | |||||||||||||||| || ||||||| || |||||||||| | |||||     
T  38876548 cttactttttaggtctaaatccggccttctgaaagtatgatacggtttgctagcctgtttaaaagcgtacttcatatgaacatctttaaataaacaatga 38876647  T
Q  210 gatctaagtttaaatagattagcgaactaata-tatcaattaaattaaactct 261  Q
    ||||||||||||||||||  ||| |||||||| ||||||||| ||||||||||    
T  38876648 gatctaagtttaaatagaccagcaaactaatattatcaattagattaaactct 38876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 11422766 - 11422667
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||| |||||| | |||||| ||| || || ||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  11422766 tagcctgattaaaaacatatttcttatgaacatttttaaataagcattgtgatctaagtttaaatagattagcgaatttatatatcaattagattaaact 11422667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 39963915 - 39964011
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    |||||||||| |||| |||||| || |||||||||| || ||| | ||||||||||||||||| || |||||||||| ||||| || ||||||||||    
T  39963915 tgtttaaaagactatatcatatgaacatctttaaataagtaatataatctaagtttaaatagactaacgaactaataaatcaactagattaaactct 39964011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 18988527 - 18988603
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||||||| ||||||||||| ||||||||||||  || |||||||| |||||||||| | || ||| ||||||||    
T  18988527 tgtttaaaagtctatttcatatcaatatctttaaacaagtaatgtgatttaagtttaaacaaatcagcaaactaata 18988603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 14830573 - 14830671
Alignment:
Q  164 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||||||||| ||| |  ||| || |||||||| | |||||| |||||||||||||||| || |||| ||||||||  ||||||  |||||||||||    
T  14830573 ctgtttaaaagcatatattttatgaacatctttaagtaagcaatatgatctaagtttaaatggactagcaaactaatagttcaattggattaaactctc 14830671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 32906826 - 32906893
Alignment:
Q  191 atctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||| | ||||||||| |||||||||||||  ||||||||| ||| ||||||| |||||||||    
T  32906826 atctttaaataaacaatgtgatataagtttaaataggctagcgaact-atagatcaatttaattaaact 32906893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 35412342 - 35412422
Alignment:
Q  168 ttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 248  Q
    ||||||| ||||||||| | || |||||||||| || ||| |||||||||||| | |||| ||| ||||||||| ||||||    
T  35412342 ttaaaagtctatttcatttgaacatctttaaataagtaatatgatctaagtttgagtagactagtgaactaataaatcaat 35412422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 2823640 - 2823533
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||| ||||||||||  |||||||||| || ||  |||||| || |||||||| |||| ||||||| | || |||||||||  |||||| | ||||||||    
T  2823640 tagcatgtttaaaagtttatttcatatgaacattattaaataagtaatgtgatataaggttaaataaactaacgaactaatggatcaatgatattaaact 2823541  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  2823540 ctcttttg 2823533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 18731254 - 18731159
Alignment:
Q  164 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||| ||||||||||| || || | | ||| |  ||||  ||||||| ||||||||||||| ||||||||| |||||| | ||||||||    
T  18731254 ctgtttaaaagtctatttcatatgaacatttgttaataaataatgcaatctaagcttaaatagattagtgaactaatagatcaatgatattaaact 18731159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 15680310 - 15680384
Alignment:
Q  167 tttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||||| ||||||||||| || |||||||||| |  |||  ||| |||||||||||| |||| ||||||||||    
T  15680310 tttaaaagtctatttcatatgaacatctttaaataactaatacgatataagtttaaataaattaacgaactaata 15680384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 10622595 - 10622636
Alignment:
Q  103 tcatagacttactttttaggcctgagtctgaccttctgaaag 144  Q
    |||||| ||||||||||| || ||||||||||||||||||||    
T  10622595 tcataggcttactttttaagcttgagtctgaccttctgaaag 10622636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 259
Target Start/End: Complemental strand, 43464725 - 43464542
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    |||||||||| |||||| | ||||||||||||| |||||||||||||| |||| |||||||||||||||  || || || | | ||||| ||||||||||    
T  43464725 gaaggcctaaacctggcatgcgacctgtcataggcttactttttaggcttgagcctgaccttctgaaagtctggtacgacctgctagcccgtttaaaagc 43464626  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    || ||||||||  | |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  43464625 ctgtttcatatggacatctttaaataagcaatgtgatctaagtttaaatagactagcgaattaatatatcaattagattaaact 43464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 9503737 - 9503900
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||||||  |||||||| | | |||||||||||||||||||| || ||| || ||||||||    
T  9503737 cctgtcatagacctacttttaaggcttgagtctgaccttttgaaagtctgatatgacctgctagcctgtttaaaagcctatatcttatgaacatctttaa 9503836  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    || ||||||||||||||||||||||| || |||||||||||||  ||||||| |||||||||||    
T  9503837 ataagcaatgtgatctaagtttaaatggactagcgaactaataattcaattagattaaactctc 9503900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 29697374 - 29697565
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||| ||||| |||||||||| ||| |||||||||||||||||| || ||||||||||||| ||||||  ||||| | || |  ||| ||||||||  |    
T  29697374 gaaggtctaagtctggcctacggcctatcatagacttactttttatgcttgagtctgaccttttgaaagtctgatacggtctgcaagcatgtttaaagac 29697473  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||| || |||||||||| ||||||| |||||||||||||||||| || ||||||||||||| ||||| ||||||||||| ||||    
T  29697474 ctatttcatatgaacatctttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatattaattagattaaactctcttttg 29697565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 267
Target Start/End: Complemental strand, 29563845 - 29563674
Alignment:
Q  90 ggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaa 189  Q
    |||||||  |||||||||||||||||||||||||||||||||| |||||||  ||| ||||| ||   ||||||||||||||||| || |||||||| ||    
T  29563845 ggcctacagcctgtcatagacttactttttaggcctgagtctggccttctggtagcctgatacgacatgttagcctgtttaaaagtctgtttcatatgaa 29563746  T
Q  190 tatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     |||||||||| ||||||||||||      |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  29563745 catctttaaataagcaatgtgatc------taaatagactagcgaactaatatatcaattagattaaactctcttttg 29563674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 22990340 - 22990583
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||| ||||| ||| || |||||| ||||| ||||||| | |||||||       |||||||||||||||| ||| | |||||||||| |||||||||    
T  22990340 aataggataggctgagttaggctttgcaaggcttgaacctagcctgccaaatttttcgaaggcctaagcctggtctatggcctgtcataggcttactttt 22990439  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    | |||||||||||| |||||| ||||  ||||| |    |||||| ||||||||||||||||| | |  || |||||| ||| ||||||||||| |||||    
T  22990440 ttggcctgagtctgcccttctaaaagtctgatacggcatgttagcttgtttaaaagcctattttacacgaacatcttttaataagcaatgtgatataagt 22990539  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    ||||||||| || | || |||||||||||||| |||||||||||    
T  22990540 ttaaatagactaacaaattaatatatcaattagattaaactctc 22990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 11837127 - 11836942
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||  |  |   |||| |||||||||||     
T  11837127 aaggcttaagcctggcctgcaacctgtcatagacttacattttaggcctgagtctgaccttatgaaagcctgattaggcctactagcttgtttaaaagca 11837028  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    | |||||||| || | |||||||| || ||||||||| ||| ||||||||| |||||| ||||||||||||| | |||||||||||    
T  11837027 tgtttcatatcaacacctttaaataagtaatgtgatcaaaggttaaatagactagcgagctaatatatcaatgatattaaactctc 11836942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 20601414 - 20601665
Alignment:
Q  21 taggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttacttttta 120  Q
    ||||||||||||||||| |||||| ||||| ||| ||||| |||||||       ||||||||||||||||||| ||  |||||||||||||||||||||    
T  20601414 taggctaggccgagctaggctttgcaaggcctgagcctggcctgccaaattttttgaaggcctaagcctggcctgcggtctgtcatagacttacttttta 20601513  T
Q  121 ggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaat------------g 208  Q
    || ||||||||  |||||||||||| || || |  | | |||||| |||||| ||||||||||||| || |||||||||| ||||||            |    
T  20601514 ggtctgagtcttgccttctgaaagcctgctaaggcctgctagcctatttaaatgcctatttcatatgaacatctttaaataagcaattaaataagtaatg 20601613  T
Q  209 tgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
     | | |||||||||||||| || ||||||||||||||||||| |||||||||    
T  20601614 cgttataagtttaaatagactaacgaactaatatatcaattagattaaactc 20601665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 261
Target Start/End: Original strand, 36159084 - 36159246
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||  ||||  |  | |||||| ||||||||||||||||| |||| || || |||||    
T  36159084 cctgtcatagacttattttttaggcctgagtctgaccttatgaaagtctgattaggcctgttagcatgtttaaaagcctattttatatgaacatatttaa 36159183  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    || || ||| ||||| ||| ||||||||  |||||| ||||||||||||||| ||||||||||    
T  36159184 ataagtaatatgatccaagattaaatagcctagcgagctaatatatcaattatattaaactct 36159246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 76 - 267
Target Start/End: Complemental strand, 21524022 - 21523842
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttacttttt-aggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaag 174  Q
    ||||||||||||||||||| ||   | |||||| |||||||||| ||||||||||||| |||||||||||| ||||| |        ||||| |    ||    
T  21524022 gaaggcctaagcctggcctgcggtatatcataggcttacttttttaggcctgagtctggccttctgaaagcctgatacg--------gcctgct----ag 21523935  T
Q  175 cctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||| |||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  21523934 cctgtttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaatctctcttttg 21523842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 262
Target Start/End: Original strand, 31132901 - 31133055
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    ||||||||||||||||||||||||||||| || |||||||||| | |||||        || ||||||||||||| |||||||||| || ||||||||||    
T  31132901 tgtcatagacttactttttaggcctgagtttggccttctgaaatcatgatac-------taacctgtttaaaagcttatttcatatgaacatctttaaat 31132993  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
     || ||||||||||||||||||||| | || | |||||||| |||||| | |||||||||||    
T  31132994 aagtaatgtgatctaagtttaaatatactatcaaactaatagatcaatgagattaaactctc 31133055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 77 - 262
Target Start/End: Original strand, 44890550 - 44890735
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||| |||| ||||| | |||||||  ||||||||||||||||||||||| |||  ||||||||||||  |    | ||||||||||||||| |    
T  44890550 aaggcctaagtctggtctacggcatgtcataagcttactttttaggcctgagtctggcctaatgaaagcttgattaggcttgctagcctgtttaaaagtc 44890649  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    ||||| |||| || |||||||||| || ||||||||  ||| ||||||||| ||||||  ||||| |||||| | |||||||||||    
T  44890650 tatttaatatgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgagataatagatcaatgatattaaactctc 44890735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 51880457 - 51880286
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatt----tcatataaatatctt 195  Q
    ||||||||| | |||||||||||||||||||||  ||| ||||||| |||||||  | | ||||||||||||||||||  |    || ||| ||||||||    
T  51880457 ctgtcataggcctactttttaggcctgagtctggtcttatgaaagcctgatatggcctgctagcctgtttaaaagcctgatatggtcttatgaatatctt 51880358  T
Q  196 taaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||| | ||||||||||||||||||||||| || |||| |||||||   ||||||| ||||||||||| ||||    
T  51880357 taagtaagcaatgtgatctaagtttaaatggactagcaaactaattgttcaattagattaaactctcttttg 51880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 52426213 - 52426376
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||  ||||  |  |   ||||||||||||||||||||||||||| |||||||||||    
T  52426213 cctgtcataggcttactttttaggtctgagtctggccttatgaaagtctgattaggcctactagcctgtttaaaagcctatttcatatgaatatctttaa 52426312  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    || || | ||| ||| ||  ||||||||| |||| | || ||| |||||| | |||||||||||    
T  52426313 ataagtagtgtaatccaatgttaaatagactagctagctgatagatcaatgatattaaactctc 52426376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 45613327 - 45613225
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 264  Q
    |||||||||| |||||| |||| ||||||||||||| | ||||||| ||| ||||||| |||| || ||||||||| ||||||||| ||||||||||| |    
T  45613327 tgtttaaaagtctattttatatgaatatctttaaataaacaatgtggtcttagtttaactagactaacgaactaatgtatcaattagattaaactctctt 45613228  T
Q  265 ttg 267  Q
    |||    
T  45613227 ttg 45613225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 248
Target Start/End: Complemental strand, 27483555 - 27483384
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||||||| | ||| |||| |||||  ||||||||||||| |||||| ||||||| | ||||  ||||  || |   ||  ||||||||||| |    
T  27483555 aaggcctaagcctgacttacaacctatcataatcttactttttaggtctgagtatgaccttataaaagtctgattagacctactaatctgtttaaaagtc 27483456  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 248  Q
    |||||||||| || || ||||||| || |||||||| |||| ||||||||| ||| || |||||| ||||||    
T  27483455 tatttcatatgaacatatttaaataagtaatgtgatttaagattaaatagactagtgagctaatagatcaat 27483384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 980845 - 980929
Alignment:
Q  102 gtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatat 186  Q
    ||||||| ||||||||||||||||||||| || |||||||||||  |||  |||| |||||||| ||||||| | ||||||||||    
T  980845 gtcataggcttactttttaggcctgagtccgatcttctgaaagcccgattcgatctgttagcctatttaaaaacttatttcatat 980929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 43946869 - 43946710
Alignment:
Q  103 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatca 202  Q
    ||||||||| | ||||| | | ||| ||||| |||||||||| ||||| ||||| |||| | |||| |||||  ||||||||||  |||||||||||| |    
T  43946869 tcatagactaattttttggacatgaatctgatcttctgaaagtttgatgtgatctgttaacttgttgaaaagtttatttcatatgtatatctttaaataa 43946770  T
Q  203 gcaa--tgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactc 260  Q
    | ||  |||||| |||||||||||||| |  | |||||||| |||||| | |||||||||    
T  43946769 gtaatgtgtgatttaagtttaaatagactgacaaactaataaatcaataacattaaactc 43946710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 27048541 - 27048640
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||||||| ||||||  | |||||||||| |  ||||| || |||||||||||||| || |||| ||||| |||||| | ||||||||    
T  27048541 tagcctgtttaaaagcctatatcatatggacatctttaaataactaatgtaatataagtttaaatagactaccgaattaatagatcaataagattaaact 27048640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 33458755 - 33458660
Alignment:
Q  164 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||| | ||||||||  || || ||||||  || |||||||| |||||||||| ||| ||| |||||||||||||||  ||||||||||    
T  33458755 ctgtttaaaagtccatttcatacgaacatttttaaagaagtaatgtgatttaagtttaaagagactagtgaactaatatatcaacgaaattaaact 33458660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 30643270 - 30643188
Alignment:
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||| |||||||||||||||| | |  | |||||||||| ||||||||||  || ||||||||| |||||| | ||||||||    
T  30643270 tattttatataaatatctttaattaattagtgtgatctaaatttaaatagacaagtgaactaataaatcaatgagattaaact 30643188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 120
Target Start/End: Complemental strand, 22771189 - 22771160
Alignment:
Q  91 gcctacgacctgtcatagacttacttttta 120  Q
    ||||||||||||||||||||||||||||||    
T  22771189 gcctacgacctgtcatagacttacttttta 22771160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 29719350 - 29719391
Alignment:
Q  209 tgatctaagtttaaatagattagcgaactaatatatcaatta 250  Q
    ||||||||||||  ||||| ||||||||||||||||||||||    
T  29719350 tgatctaagtttgcatagactagcgaactaatatatcaatta 29719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 261
Target Start/End: Complemental strand, 1222548 - 1222364
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||||| || ||||||| || |||||||||| |||||||| ||||| | || ||||||||||||||   ||||| | || | |||||||||||||| ||    
T  1222548 aaggcctgagtctggcctgcggcctgtcataggcttactttctaggcttaagcctgaccttctgaaaatctgatacggtctgctagcctgtttaaaaacc 1222449  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  1222448 tatttcatatgaaaatctttaaataagcaatgtgatctaagtttaaatagactagcgaaccaatatatcaattagattaaactct 1222364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 25107662 - 25107434
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||| |||||| |||||||||||  ||||| ||| |||||| ||||||       |||||||||||||||  | | |  |||||||||||||||||||    
T  25107662 aataggttaggccaagctaagctttacaaggcctgagcctggtatgccaaattttttgaaggcctaagcctgatcaaaggtctgtcatagacttactttt 25107563  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    | |||||||| ||| |||||||||||| ||||| || | ||||| |||||||||||||||||||| || || |||||||||| |||||||| ||||||||    
T  25107562 tgggcctgag-ctggccttctgaaagcctgatacgacctgttagtctgtttaaaagcctatttcaaatgaacatctttaaataagcaatgtaatctaagt 25107464  T
Q  219 ttaaatagattagcgaactaatatatcaat 248  Q
    ||||||||  ||||||||||||||||||||    
T  25107463 ttaaataggctagcgaactaatatatcaat 25107434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 112 - 267
Target Start/End: Original strand, 21019681 - 21019836
Alignment:
Q  112 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 211  Q
    |||||||||||||||||||| ||||||||||||  |||||||||| | |||| ||||||||||  ||| || ||| || |||||||||| ||||||||||    
T  21019681 tactttttaggcctgagtctaaccttctgaaagtctgatatgatctgctagcatgtttaaaagtttatatcttatgaacatctttaaataagcaatgtga 21019780  T
Q  212 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  21019781 tctaagtttaaatagactagcgaactaatagatcaattaaattaaactctcttttg 21019836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 10710389 - 10710147
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    ||||||||| |||||  || |||||| ||||||||| ||||| ||||||        ||||| |||||| |||||| | |||||||||||| ||||||||    
T  10710389 aataggctatgccgatttaggctttgcaaggcatgagcctggcctgccatattttttgaaggtctaagcttggcctgcaacctgtcatagatttactttt 10710290  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||||||||| || ||||| ||||||| |||||  | | |||||||||||||||| | ||||| |||| || || ||| ||| ||||||||| |||| ||    
T  10710289 taggcctgagccttaccttttgaaagcctgatacaacctgttagcctgtttaaaaacatattttatatgaacatattttaataagcaatgtgctctatgt 10710190  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    |||| |||| |||| ||||||||||||||||||||||||||||    
T  10710189 ttaagtagactagcaaactaatatatcaattaaattaaactct 10710147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 39139235 - 39139426
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||||||||||||| | || |||||||||| ||||| ||||||| |||||| || |||||||||||  ||||| |||| | ||| ||||||| ||||    
T  39139235 gaaggcctaagcctggcatgcgccctgtcataggcttacgttttaggtctgagtttggccttctgaaagtctgatacgatctgctagtctgtttacaagc 39139334  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || ||| |||| || | |||||||| || |||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||| ||||    
T  39139335 ctgttttatatgaacacctttaaataagtaatgtgatctaagtttaaatagaccagcgaactaatatatcaattagattaatctctcttttg 39139426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 40691140 - 40691241
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  40691140 tagcctgtttaaaagcctatttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatatcaattagattaaact 40691239  T
Q  260 ct 261  Q
    ||    
T  40691240 ct 40691241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 22738433 - 22738680
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||| |||||||||||||| |||||| ||||| |||  ||||  ||||||       |||||| ||||| |||||| || |||||||||| | || ||||    
T  22738433 aataagctaggccgagctaggctttgcaaggcctgagtctggcttgccaagttttttgaaggcataagcttggcctgcggcctgtcataggcatattttt 22738532  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    ||||||||||| || |||||| ||||  ||||| |  | | |||||||||||||||||||| | |||| || |||||||||| || ||| ||||||||||    
T  22738533 taggcctgagtttggccttct-aaagtctgatacggccagctagcctgtttaaaagcctatattatatgaacatctttaaataaggaatatgatctaagt 22738631  T
Q  219 ttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||||| ||||    
T  22738632 ttaaatagactagtgaactaatatattaattagattaaactctcttttg 22738680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 96 - 262
Target Start/End: Complemental strand, 2062838 - 2062672
Alignment:
Q  96 cgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctt 195  Q
    |||||||| ||||||||||||||||| ||| ||||||  |||  |||||||| ||| || | |||||| ||||||||| | |||||||||| || |||||    
T  2062838 cgacctgttatagacttactttttagacctaagtctggtctttcgaaagcttaatacgacctgttagcatgtttaaaatcatatttcatatgaacatctt 2062739  T
Q  196 taaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    ||||| |||||||||||| ||||||||||||| ||||||  ||||| |||||||| |||||||||||    
T  2062738 taaataagcaatgtgatcgaagtttaaatagactagcgatttaatagatcaattagattaaactctc 2062672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 2621646 - 2621410
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||||||||||||| || | |||||||||| |||   ||| |||||||       ||||||| |||||||  || |||||| |||||| |||||||||    
T  2621646 aataggctaggccgagttaggttttgtaaggcctgagtttggcctgccaatttttttgaaggccaaagcctgatctgcgacctatcataggcttactttt 2621547  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
    |||| ||||||||| |||||||||||   ||||   || | || | |||||||||| ||||||||||| || || ||||||| |||||| ||||||||||    
T  2621546 tagggctgagtctggccttctgaaagtcggatacagtctgctaacatgtttaaaaggctatttcatattaacatatttaaataagcaatatgatctaagt 2621447  T
Q  219 ttaaatagattagcgaactaatatatcaattaaatta 255  Q
    ||||||||  || ||||||||||||||||||| ||||    
T  2621446 ttaaatagtctaacgaactaatatatcaattagatta 2621410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 267
Target Start/End: Original strand, 2374176 - 2374363
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    ||||||||||||| | |  |||||||||| | ||||||||||||||||| |||||||| ||||||||||||| || |   || | ||||||||||| |||    
T  2374176 gcctaagcctggcatgcagcctgtcataggcctactttttaggcctgagcctgaccttatgaaagcttgatacgaccttctaacttgtttaaaagcttat 2374275  T
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     || ||  || || ||||||| ||||||||||||||||||||||| || |||| ||||||||| ||||||| | ||||||||| ||||    
T  2374276 atcttacgaacatatttaaataagcaatgtgatctaagtttaaatggactagcaaactaatatttcaattagaataaactctcttttg 2374363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 267
Target Start/End: Original strand, 30469274 - 30469453
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||||||| |||  | |||||||||| ||||| ||||||| ||||||| |||||||||||||| ||||||  | | | |||||||||||         
T  30469274 aaggcctaagcctgacctgtggcctgtcataggcttaccttttaggtctgagtcagaccttctgaaagcctgatat--tgcctgagcctgtttaa----- 30469366  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
        |||||| || |||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||| ||||    
T  30469367 ----tcatatgaacatctttaaataagcaatgtgatctaagtttgaatagactagcaaactaatatatcaattacattaaactctcttttg 30469453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 262
Target Start/End: Complemental strand, 19973152 - 19973003
Alignment:
Q  112 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 211  Q
    |||||||||||||||||||| ||||||||||||  |||||||||| | |||| ||||||||||  ||| || ||| || |||||||||| ||||||||||    
T  19973152 tactttttaggcctgagtctaaccttctgaaagtctgatatgatctgctagcatgtttaaaagtttatatcttatgaacatctttaaataagcaatgtga 19973053  T
Q  212 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||| ||||||||| ||| || |||||| ||||| ||||| ||||||||    
T  19973052 tctaag-ttaaatagactagggagctaatagatcaaataaatgaaactctc 19973003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 9617276 - 9617380
Alignment:
Q  163 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||||||||| ||||||||||| || || ||||||| |||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  9617276 cctgtttaaaagtctatttcatatgaacatatttaaataagcaatgtaatctaaattcaaatagattaacgaactaatatatcaattaaattaaactctc 9617375  T
Q  263 ctttg 267  Q
     ||||    
T  9617376 ttttg 9617380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 31588081 - 31587974
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||| ||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||||    
T  31588081 tagcctctttaaaagcttgtttcatatgaacatctttaaataagcaatgtgatctaagtttaaatagactagcgaactaatatattaataagattaaact 31587982  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  31587981 ctcttttg 31587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 267
Target Start/End: Complemental strand, 3458083 - 3457928
Alignment:
Q  112 tactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtga 211  Q
    |||||||||| | ||||| ||  ||| ||||||| |||||||||  | |||| ||||||||||||||| || ||| || |||||||| | ||||||||||    
T  3458083 tactttttagccttgagtttggacttttgaaagcctgatatgatatgctagcatgtttaaaagcctatatcttatgaacatctttaagtaagcaatgtga 3457984  T
Q  212 tctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | ||||||||||| |||||| |||||||||  ||||||| ||||||||||| ||||    
T  3457983 tttaagtttaaatggattagtgaactaatagttcaattagattaaactctcttttg 3457928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 10811829 - 10811974
Alignment:
Q  122 gcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagttta 221  Q
    |||| ||||||  ||||||||||| ||||| | || | |||||||||||||||||||| || ||| || | |||||||| ||||||||||||||||||||    
T  10811829 gcctaagtctggtcttctgaaagcctgatacggtctgctagcctgtttaaaagcctatatcttatgaacaactttaaataagcaatgtgatctaagttta 10811928  T
Q  222 aatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||| || || |||||||||   ||||||| ||||||||||| ||||    
T  10811929 aatggactaacgaactaatggttcaattagattaaactctcttttg 10811974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 110 - 257
Target Start/End: Complemental strand, 17989107 - 17988962
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    |||||||||||||||||||||||  ||||||||||  ||||    | |  |||||||||||||||||||||| | || || |||||||||| ||||||||    
T  17989107 cttactttttaggcctgagtctggtcttctgaaagtctgatggcctac--tagcctgtttaaaagcctattttacatgaacatctttaaataagcaatgt 17989010  T
Q  210 gatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
     || |||||||||||||| ||  |||||||||||||||||| ||||||    
T  17989009 aatttaagtttaaatagactaaggaactaatatatcaattagattaaa 17988962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 31955832 - 31955730
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||| ||| || ||| || || ||||||| ||||||| |||||||||||||||||| || |||||||||||||| |||| ||||||||    
T  31955832 tagcctgtttaaaagcatatatcgtattaacatttttaaataagcaatgcgatctaagtttaaatagactaacgaactaatatatcgattagattaaact 31955733  T
Q  260 ctc 262  Q
    |||    
T  31955732 ctc 31955730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 259
Target Start/End: Complemental strand, 38996286 - 38996126
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| ||||||||||||| |||| |||   |||||| |||  ||| |||| |   ||  |||||||||||| |||||| ||| || || |||||    
T  38996286 cctgtcataggcttactttttaggtctgattctagtcttctggaagtctgacatgacctactaatctgtttaaaagcatatttcgtattaacatttttaa 38996187  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    || ||||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  38996186 ataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaact 38996126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 259
Target Start/End: Complemental strand, 44602308 - 44602148
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||| ||||||||||||| |||| |||   |||||| |||  ||| |||| |   ||  |||||||||||| |||||| ||| || || |||||    
T  44602308 cctgtcataggcttactttttaggtctgattctagtcttctggaagtctgacatgacctactaatctgtttaaaagcatatttcgtattaacatttttaa 44602209  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    || ||||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||||    
T  44602208 ataagcaatgcgatgtaagtttaaatagactagtgaactaatatatcaattagattaaact 44602148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 77 - 200
Target Start/End: Original strand, 2510377 - 2510500
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||||| |||||||||| || |||||||||| ||||||||||||| |||||||||  |||||||| || ||||| || | | ||| |||||||||||||    
T  2510377 aaggcctgagcctggcctgcggcctgtcataggcttactttttaggtctgagtctggtcttctgaaggcctgatacgacctgctagtctgtttaaaagcc 2510476  T
Q  177 tatttcatataaatatctttaaat 200  Q
    ||||| |||| || || |||||||    
T  2510477 tattttatatgaacatttttaaat 2510500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 17006299 - 17006405
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||| ||| |||||| || |||||||| | | |||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||||    
T  17006299 tagcctgtttaaaagcatatatcatatgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaact 17006397  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  17006398 ctcttttg 17006405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 17570949 - 17570843
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||| ||| |||||| || |||||||| | | |||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||||    
T  17570949 tagcctgtttaaaagcatatatcatatgaacatctttaagtaaacaatatgatctaagtttaaatagaccagccaactaata-atcaatttaattaaact 17570851  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  17570850 ctcttttg 17570843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 44652707 - 44652617
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| |  | | |||||||||||||||| |||||||||| || ||||||||||    
T  44652707 cttactttttaggtctgagtctggccttctgaaagcctgatacggcctgctagcctgtttaaaagcttatttcatatgaacatctttaaat 44652617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 254746 - 254924
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  254746 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 254844  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaa 256  Q
    ||| |||||| || |||||||||| | ||||||||| |||||||||| ||| ||||||||||| |  ||||||| |||||    
T  254845 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaa 254924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 661112 - 660934
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  661112 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 661014  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaa 256  Q
    ||| |||||| || |||||||||| | ||||||||| |||||||||| ||| ||||||||||| |  ||||||| |||||    
T  661013 tatatcatatgaacatctttaaataaacaatgtgatataagtttaaaaagactagcgaactaacaggtcaattagattaa 660934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 18020465 - 18020353
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    ||||||||||||| ||||| ||||| |||||| | |  |||||||| |||       ||||| |||| |||||||| || ||||||||||||||||||||    
T  18020465 aataggctaggccaagctaggctttttaaggcctaagtctggtctgtcaatttttttgaaggtctaaccctggcctgcggcctgtcatagacttactttt 18020366  T
Q  119 taggcctgagtct 131  Q
    |||||||||||||    
T  18020365 taggcctgagtct 18020353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 262
Target Start/End: Original strand, 35458698 - 35458861
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    |||||||||  ||||||||||||| |  |||||| |||| ||||||| ||||  |  | | ||| |||||||||||| |||||||||| ||  | |||||    
T  35458698 cctgtcataagcttactttttaggtccaagtctggccttatgaaagcctgattaggcctgctagtctgtttaaaagcatatttcatatgaacgtttttaa 35458797  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    || || ||||||||| ||  ||||||||| |||||| |||||| |||||| | |||||||||||    
T  35458798 ataagtaatgtgatccaaagttaaatagactagcgagctaatagatcaatgatattaaactctc 35458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 2510494 - 2510543
Alignment:
Q  218 tttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  2510494 tttaaatagactagcgaactaatatatcaattagattaaactctcttttg 2510543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 846910 - 846751
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||| | ||||||  || ||||| |||  ||||||||||||| ||||| |||||||| ||||||| |  ||   || | ||| ||||||||||| |    
T  846910 aaggcctatgtctggcccgcggcctgttataagcttactttttaggtctgagcctgacctt-tgaaagcctattacagtctgctagtctgtttaaaagtc 846812  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaact 237  Q
    ||| |||||| || ||||||||||   ||||||||| |||||||||| ||| |||||||||    
T  846811 tatatcatatgaacatctttaaatacacaatgtgatataagtttaaaaagactagcgaact 846751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 17948929 - 17949044
Alignment:
Q  110 cttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgt 209  Q
    |||| |||||||| |||||||||||||||| ||||  || || || | | ||||||||| ||||| |||| |||||| || || ||||||| | |||| |    
T  17948929 cttaatttttaggtctgagtctgaccttctaaaagtctgttacgacctgctagcctgttgaaaagtctatatcatatgaacatttttaaataaacaatat 17949028  T
Q  210 gatctaagtttaaata 225  Q
     || ||||||||||||    
T  17949029 aatataagtttaaata 17949044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 9552501 - 9552563
Alignment:
Q  179 tttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||||| || || ||||||| | |||||||||||||||||||||| | || ||||||||||    
T  9552501 tttcatatgaacatatttaaataaacaatgtgatctaagtttaaataaactaacgaactaata 9552563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 39629220 - 39629158
Alignment:
Q  83 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagc 145  Q
    |||||||||||| || |||| | ||| ||||||||||||| || |||||| ||||||||||||    
T  39629220 taagcctggcctgcggcctgacgtaggcttactttttaggtctaagtctggccttctgaaagc 39629158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 39638770 - 39638708
Alignment:
Q  83 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagc 145  Q
    |||||||||||| || |||| | ||| ||||||||||||| || |||||| ||||||||||||    
T  39638770 taagcctggcctgcggcctgacgtaggcttactttttaggtctaagtctggccttctgaaagc 39638708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 40691041 - 40691116
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcct 94  Q
    ||||||||||||||||||| |||||| ||||| |||  |||| |||||||       |||||||||||||||||||    
T  40691041 aataggctaggccgagctaggctttgcaaggcctgagtctggcctgccaatttttttgaaggcctaagcctggcct 40691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 44652780 - 44652731
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaa 68  Q
    ||||||||||||||||||| |||||| ||||| ||| ||||| |||||||    
T  44652780 aataggctaggccgagctaggctttgcaaggcctgagcctggcctgccaa 44652731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 40554473 - 40554397
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    |||||||||| |||| | | || || |||||||||  || ||||||||||||||||||||||| || |||| |||||    
T  40554473 tgtttaaaagtctatcttaaatgaacatctttaaaaaagtaatgtgatctaagtttaaatagactaacgaattaata 40554397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 80 - 267
Target Start/End: Complemental strand, 9716493 - 9716306
Alignment:
Q  80 gcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctat 179  Q
    ||||||| ||||||| |  ||| |||||| | |||||||||||||||||| ||||||||||||||  ||||| |  | | ||||||||||||||||||||    
T  9716493 gcctaagtctggcctgcagcctatcataggcctactttttaggcctgagtttgaccttctgaaagtctgatacggcctgctagcctgtttaaaagcctat 9716394  T
Q  180 ttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     || ||| ||||||||||||| |||||||||||||||||||| || || |||||||||||||  ||||||| ||||||||||| ||||    
T  9716393 atcttatgaatatctttaaataagcaatgtgatctaagtttacattgactagcgaactaatagttcaattagattaaactctcttttg 9716306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 111 - 267
Target Start/End: Original strand, 16054892 - 16055048
Alignment:
Q  111 ttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtg 210  Q
    |||||||||||| ||||| | |||||||||||||| ||||| ||   | || | |||||||||||||||||||||| || |||||| ||| | ||||||     
T  16054892 ttactttttaggtctgagcccgaccttctgaaagcatgatacgacatgctaacatgtttaaaagcctatttcatatgaacatctttgaataaacaatgta 16054991  T
Q  211 atctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  16054992 atctaagtttaaatagactagcgaactaatatatcaattagattaaactctcttttg 16055048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 267
Target Start/End: Original strand, 43897988 - 43898153
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||  |||||||||||||| |||||||| | |||||||||||||||| || | | ||   ||||||||||| ||||||||||||  ||||||||||    
T  43897988 tgtcatatgcttactttttaggcatgagtctggcattctgaaagcttgataagacctgctattttgtttaaaagcttatttcatataac-atctttaaat 43898086  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     | |||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||| ||||    
T  43898087 aaacaatgtgatctaagtttaaatagtctagcaaactaatatatcaattagattaaactctcttttg 43898153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 267
Target Start/End: Original strand, 5880133 - 5880316
Alignment:
Q  83 taagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttc 182  Q
    |||||||||| | || |||||||||| | ||| |||||||| |||||||| |||||||||||||||||||   | | ||| |||||||||||| ||| ||    
T  5880133 taagcctggcatgcggcctgtcataggcctacattttaggcttgagtctggccttctgaaagcttgatatagcctgctagactgtttaaaagcttatatc 5880232  T
Q  183 atataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
     ||| || |||||||||| ||||||||||||||||||||||| || |||||||||||||   |||||| ||||||||||| ||||    
T  5880233 ttatgaacatctttaaataagcaatgtgatctaagtttaaatggactagcgaactaata-gccaattagattaaactctcttttg 5880316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 77 - 262
Target Start/End: Complemental strand, 39848726 - 39848541
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    ||||||||||||||| || |  ||| |||||| ||||| |||||||| ||||| || |||| ||||||| ||||  |  | | ||| || ||||||||||    
T  39848726 aaggcctaagcctggtctgcagcctatcataggcttacattttaggcttgagtatggccttatgaaagcctgattaggccagctagactatttaaaagcc 39848627  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||||||| || |||||||||| || ||||||||  ||||||||||||| ||||||||||||| |||| | | |||||||||||    
T  39848626 tatttcatatgaacatctttaaataagtaatgtgattcaagtttaaatagactagcgaactaatagatcagtgatattaaactctc 39848541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 4816833 - 4816726
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||||||| || ||| || || ||||||| ||||||||| ||||||||||||| ||  ||||||||||||  ||||||||||||||||    
T  4816833 tagcctgtttaaaagcctatatcttatgaacatatttaaataagcaatgtggtctaagtttaaatggaccagcgaactaatagttcaattaaattaaact 4816734  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  4816733 ctcttttg 4816726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 16202308 - 16202142
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgat-atgatccgt-tagcctgtttaaaag 174  Q
    |||||||||||||||| | || ||| |||||| ||||||||||| || |||| |||||||| ||||||| |||| |||  || | |||||||||||||||    
T  16202308 aaggcctaagcctggcttgcggcctatcataggcttactttttaagcttgaggctgaccttatgaaagcctgattatg--ccttctagcctgtttaaaag 16202211  T
Q  175 cctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatata 243  Q
    |||| ||||||| || |||||||||| || ||||||||  ||| ||||||||| | |||| ||||||||    
T  16202210 cctacttcatatgaacatctttaaataagtaatgtgattcaaggttaaatagacttgcgagctaatata 16202142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 9730100 - 9730219
Alignment:
Q  147 tgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatca 246  Q
    |||||||||| | |||| |||||||||||  ||| ||||| || |||||||||| ||||||||| | ||| |||| ||||| ||||||||||||| ||||    
T  9730100 tgatatgatctgctagcatgtttaaaagctgatt-catatgaacatctttaaataagcaatgtggtataaatttagatagactagcgaactaatagatca 9730198  T
Q  247 attaaattaaactctcctttg 267  Q
    |||||||||||||||| ||||    
T  9730199 attaaattaaactctcttttg 9730219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 32700587 - 32700689
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||||| | ||||||||||| || |||||||||| || ||||||||  ||| ||||||||| ||||||||||||| |||||| | ||||||||    
T  32700587 tagcctgtttaaatgtctatttcatatgaacatctttaaataagtaatgtgattcaaggttaaatagactagcgaactaataaatcaatgatattaaact 32700686  T
Q  260 ctc 262  Q
    |||    
T  32700687 ctc 32700689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 267
Target Start/End: Complemental strand, 38556647 - 38556514
Alignment:
Q  134 ccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcg 233  Q
    |||||||||||| | |||||| | | ||| |||||||||||||||| || |||||| || ||||||| ||||||||||| ||||||||||| || | |||    
T  38556647 ccttctgaaagcctaatatgacctgctagtctgtttaaaagcctatatcttataaacatatttaaataagcaatgtgatataagtttaaatggactggcg 38556548  T
Q  234 aactaatatatcaattaaattaaactctcctttg 267  Q
    |||||| |  ||||| | ||||||||||| ||||    
T  38556547 aactaaaagttcaatcagattaaactctcttttg 38556514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 5442919 - 5443026
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||| |||||||||| |||| | ||||  | || ||||||| ||||||| |||||||||||||||||| || |||||||||| |||||||| ||||||||    
T  5442919 tagcatgtttaaaagtctatattatatgcacatatttaaataagcaatgcgatctaagtttaaatagactaacgaactaatagatcaattagattaaact 5443018  T
Q  260 ctcctttg 267  Q
    ||| ||||    
T  5443019 ctcttttg 5443026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 16735032 - 16735130
Alignment:
Q  164 ctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    ||||||||||| |||| || ||| || |||||||||| || |||||||| ||||||||||| || |||||||||||||  ||||||||| |||||||||    
T  16735032 ctgtttaaaagtctatatcttatgaacatctttaaataagtaatgtgatgtaagtttaaatggactagcgaactaatagttcaattaaactaaactctc 16735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 1845216 - 1845320
Alignment:
Q  163 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctc 262  Q
    |||||||||||| |||| || ||| || |||||||||| |||| | |||||||| ||||||| || |||||||||||||  | ||||| |||||||||||    
T  1845216 cctgtttaaaagtctatatcttatgaacatctttaaataagcattatgatctaattttaaatggactagcgaactaatagtttaattagattaaactctc 1845315  T
Q  263 ctttg 267  Q
     ||||    
T  1845316 ttttg 1845320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 267
Target Start/End: Complemental strand, 5712674 - 5712574
Alignment:
Q  167 tttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctccttt 266  Q
    |||||||| ||||||||||| || || ||||||| || ||||||||||||| ||||||||| |||| |  ||||| |||||| | ||||||||||| |||    
T  5712674 tttaaaagtctatttcatatgaacatatttaaataagtaatgtgatctaaggttaaatagactagcaagttaatagatcaatgatattaaactctctttt 5712575  T
Q  267 g 267  Q
    |    
T  5712574 g 5712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 7598853 - 7598999
Alignment:
Q  103 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatcc-gttagcctgtttaaaagcctatttcatataaatatctttaaatc 201  Q
    ||||||||||| |||||||||||||||| | ||| |||||||  || | || ||| | |||  ||||||||||| ||||| |||| || || |||||||     
T  7598853 tcatagacttattttttaggcctgagtcaggcctcctgaaagtctgttgtggtcctggtagtgtgtttaaaagcatattttatatgaacatatttaaata 7598952  T
Q  202 agcaatgtgatctaagtttaaatagattagcgaactaatatatcaat 248  Q
    || || ||||||| | ||| |||||| || |||||||||||||||||    
T  7598953 agtaacgtgatctgaatttgaatagactatcgaactaatatatcaat 7598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 10057215 - 10057297
Alignment:
Q  175 cctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
    ||||| |||||| ||  ||||||||| | ||||||||| |||||||||||||| ||||||| ||||| |||||||| ||||||    
T  10057215 cctatatcatatgaacttctttaaataaacaatgtgatataagtttaaatagactagcgaattaatagatcaattagattaaa 10057297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 29037674 - 29037735
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 226  Q
    ||||||||||| ||||||||||||| |||||||||| || |||| | |||||||||||||||    
T  29037674 tgtttaaaagcttatttcatataaacatctttaaataagtaatgcggtctaagtttaaatag 29037735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 12677928 - 12677840
Alignment:
Q  159 ttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaa 247  Q
    |||| |||||||||| | |||||||||| ||||||||||||| ||||| | | ||||| |||||||| | ||| | |||||||||||||    
T  12677928 ttagtctgtttaaaaacttatttcatatgaatatctttaaataagcaacgcgttctaaatttaaataaactagtggactaatatatcaa 12677840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 37259407 - 37259358
Alignment:
Q  191 atctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaat 240  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||||||    
T  37259407 atctttaaatcagtaatgtgatctaagtttaaatagacaaacgaactaat 37259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 5712743 - 5712699
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttag 121  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||    
T  5712743 aaggcctaagtctggcctacggcctgtcatacacttactttttag 5712699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 2764308 - 2764246
Alignment:
Q  163 cctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaata 225  Q
    ||||||||||||||||||| ||||||| || ||||||| |  |||||  ||||||||||||||    
T  2764308 cctgtttaaaagcctatttaatataaaaatatttaaattaataatgttttctaagtttaaata 2764246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 5331491 - 5331269
Alignment:
Q  19 aataggctaggccgagctaagctttgtaaggcatgaacctggtctgccaannnnnnngaaggcctaagcctggcctacgacctgtcatagacttactttt 118  Q
    |||||||||||||||| ||  ||||| ||||| | | |||||||||||||        || |||||| |||||||| || |||||||||||| |||||||    
T  5331491 aataggctaggccgagatagactttgcaaggcctaagcctggtctgccaaatttttttaaagcctaaacctggcctgcggcctgtcatagacctactttt 5331392  T
Q  119 taggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagt 218  Q
     ||||||||||||| |||||||||||||||||| |  | | || ||||||||||| ||||| || ||| ||||||||||||| |||||||||| ||||||    
T  5331391 aaggcctgagtctggccttctgaaagcttgatacggcctgctaacctgtttaaaaacctatatcttatgaatatctttaaataagcaatgtgacctaagt 5331292  T
Q  219 ttaaatagattagcgaactaata 241  Q
    |||||| || || ||||||||||    
T  5331291 ttaaatggactaacgaactaata 5331269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 267
Target Start/End: Complemental strand, 24073784 - 24073594
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    |||||||||||||||||||||| |||||||| | || || ||||||||||||||||| ||||| |||| | ||||| || | | |||||||| |||||||    
T  24073784 gaaggcctaagcctggcctacggcctgtcattggctcaccttttaggcctgagtctggccttcggaaaacctgatacgacctgctagcctgtctaaaagc 24073685  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | ||||||||| || |||||| ||| |||||||||||||  | ||||||||| |||| ||| ||||||||||||| |||||| |||| ||||    
T  24073684 ccatttcatatgaacatcttttaataagcaatgtgatct-gggttaaatagactagcaaaccaatatatcaattagattaaattctcttttg 24073594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 267
Target Start/End: Original strand, 33247973 - 33248141
Alignment:
Q  99 cctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaa 198  Q
    ||||||||||||||||||||||| ||||||| ||   |||||||||  ||||| ||   |||| ||||||||||||||||||||||||||| || ||| |    
T  33247973 cctgtcatagacttactttttagacctgagtttggatttctgaaagtctgatacgacatgttatcctgtttaaaagcctatttcatataaacatatttca 33248072  T
Q  199 atcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||  ||||||| |||||||| |||||||| || | |||||| |||||||||||||||||||||| ||||    
T  33248073 atttgcaatgttatctaagtgtaaatagactaacaaactaagatatcaattaaattaaactctcttttg 33248141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 267
Target Start/End: Complemental strand, 24556834 - 24556654
Alignment:
Q  88 ctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatata 187  Q
    ||||||| || |||||||||||| ||||||||| || | || ||||||||||| |||| ||||| |  | | |||||||||||||||  ||| || |||     
T  24556834 ctggcctgcggcctgtcatagacctactttttaagctttagcctgaccttctgtaagcctgatacggcctgctagcctgtttaaaaggatatatcttatg 24556735  T
Q  188 aatatctttaaatcagcaatgtgatctaa-gtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    || |||||||||| ||||||||||||||| ||||||||||| |||||||||||||  ||||||| ||||||||||| ||||    
T  24556734 aacatctttaaataagcaatgtgatctaaagtttaaatagactagcgaactaatagttcaattagattaaactctcttttg 24556654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 267
Target Start/End: Original strand, 10667453 - 10667644
Alignment:
Q  76 gaaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagc 175  Q
    ||||||||||| ||||| | ||  || |||||  |||| ||||||||  |||||||| |||||||||||| || || |  | | ||| ||||||||||||    
T  10667453 gaaggcctaagtctggcttgcggtctatcatatgcttaatttttaggtatgagtctggccttctgaaagcctgctacggcctgctagtctgtttaaaagc 10667552  T
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    ||||||||||| || ||||||  || || ||||||||||||||||||||||| |||| |||| ||| |||||||| | ||||||||| ||||    
T  10667553 ctatttcatatgaacatctttgtataagtaatgtgatctaagtttaaatagactagcaaactcatagatcaattagaataaactctcttttg 10667644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 267
Target Start/End: Complemental strand, 9952929 - 9952789
Alignment:
Q  127 agtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatag 226  Q
    |||||| |||||||||||||||||| | || | ||||||||||||||| |||| |  ||| || |||||||||| | |||||||||||| |||||||| |    
T  9952929 agtctggccttctgaaagcttgatacggtctgctagcctgtttaaaagtctatatattatgaacatctttaaataaacaatgtgatctacgtttaaatgg 9952830  T
Q  227 attagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    | || ||||||||||  ||||||| ||||||||||| ||||    
T  9952829 actaccgaactaatagttcaattagattaaactctcttttg 9952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 26244432 - 26244338
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    ||||||||||| ||| |||| | ||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||||    
T  26244432 tgtttaaaagcatatatcatgtgaatatatttaaataagcaatgtgatctaagtttcaatagattagtgaactaataaatcaattagattaaact 26244338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 267
Target Start/End: Original strand, 33614459 - 33614611
Alignment:
Q  115 tttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatct 214  Q
    ||||||||| ||| |||||| |||||||||  |||||| |  |||||| || ||||||| ||||||||||||||| || |||||||    ||||| || |    
T  33614459 tttttaggcttgattctgactttctgaaagtctgatataacacgttagtctatttaaaaacctatttcatataaacatatttaaatatataatgtaatat 33614558  T
Q  215 aagtttaaatagattagcgaactaatatatcaattaaattaaactctcctttg 267  Q
    |||||||||||||| | ||||||||||||||||| | ||| ||||||| ||||    
T  33614559 aagtttaaatagatcaacgaactaatatatcaatgagattgaactctcttttg 33614611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 225
Target Start/End: Complemental strand, 8351421 - 8351296
Alignment:
Q  100 ctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaa 199  Q
    ||||||||||||||||||||||| |||| || || ||||| ||||||||||||||   | |||| ||||||||||| |||||||||| ||   |||||||    
T  8351421 ctgtcatagacttactttttaggtctgaatccgatcttctaaaagcttgatatgacgtgctagcttgtttaaaagcatatttcatatgaacgcctttaaa 8351322  T
Q  200 tcagcaatgtgatctaagtttaaata 225  Q
    | || |||||||| |||| |||||||    
T  8351321 taagtaatgtgatataagattaaata 8351296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 261
Target Start/End: Original strand, 13640730 - 13640877
Alignment:
Q  114 ctttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatc 213  Q
    |||||||||  |||||||| | |||||||||| |||||  | |   |||| |||| |||||| ||| || ||| || ||| |||||| |||||||||||     
T  13640730 ctttttaggtatgagtctggctttctgaaagcctgatacaaccttctagcatgttcaaaagcatatatcttatgaacatcattaaataagcaatgtgata 13640829  T
Q  214 taagtttaaatagattagcgaactaatatatcaattaaattaaactct 261  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||||    
T  13640830 taagttttaatagactagctaactaataaatcaattaaattaaactct 13640877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 5167129 - 5167267
Alignment:
Q  103 tcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatca 202  Q
    ||||||||||||||||||||||||||| ||  ||||||||||| ||||| |  |   ||| |||||||||||||||| || ||| |  ||||||||||      
T  5167129 tcatagacttactttttaggcctgagtttggtcttctgaaagcctgatacggcctactagtctgtttaaaagcctatatcttatgatcatctttaaatat 5167228  T
Q  203 gcaatgtgatctaagtttaaatagattagcgaactaata 241  Q
    ||||| | |||||||||||||| ||  ||||||||||||    
T  5167229 gcaatataatctaagtttaaatggacgagcgaactaata 5167267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 6248951 - 6248850
Alignment:
Q  160 tagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaact 259  Q
    |||||||||||||||  ||| || ||| || || ||||||| ||||||||  |||||||||||||||| | ||||| |||||||||| ||| ||||||||    
T  6248951 tagcctgtttaaaagattatatcttattaacatatttaaataagcaatgttgtctaagtttaaatagactggcgaattaatatatcagttagattaaact 6248852  T
Q  260 ct 261  Q
    ||    
T  6248851 ct 6248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 5423200 - 5423086
Alignment:
Q  134 ccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcg 233  Q
    |||| ||||||| |||||||  ||| ||| ||||  ||||| ||||||||||| ||||||||||||| |  | |||||| ||| ||||||||||| |||     
T  5423200 ccttttgaaagcatgatatggcccgatagtctgtgcaaaagtctatttcatattaatatctttaaataaatattgtgatataaatttaaatagatgagca 5423101  T
Q  234 aactaatatatcaat 248  Q
    |||||||| ||||||    
T  5423100 aactaatagatcaat 5423086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 2803825 - 2803874
Alignment:
Q  176 ctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaata 225  Q
    ||||||||||| ||||||||||||| || |||||||||||| ||||||||    
T  2803825 ctatttcatatgaatatctttaaataagtaatgtgatctaattttaaata 2803874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 6228406 - 6228374
Alignment:
Q  194 tttaaatcagcaatgtgatctaagtttaaatag 226  Q
    ||||||| |||||||||||||||||||||||||    
T  6228406 tttaaataagcaatgtgatctaagtttaaatag 6228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 53164 - 53062
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaactctcct 264  Q
    |||||||||||||||||||||| || |||||||||| | ||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |    
T  53164 tgtttaaaagcctatttcatatgaacatctttaaataaacaattagatctaagtttaaatagattaacgaactaatatatcgattaaattaaactctctt 53065  T
Q  265 ttg 267  Q
    |||    
T  53064 ttg 53062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 11186 - 11006
Alignment:
Q  77 aaggcctaagcctggcctacgacctgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcc 176  Q
    |||||||||| ||||||| || ||| |||||| ||||| |||||| | ||||||||||||||  ||||  |  || | || | || |||||||||| ||     
T  11186 aaggcctaagtctggccttcggcctatcataggcttacgttttagacttgagtctgaccttccaaaagtcttctacggtctgctaacctgtttaaa-gca 11088  T
Q  177 tatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaac 258  Q
    |||||||||| || |||||||||| |||||| ||||||||||||||||||| || | ||||||||||| ||||| |||||||    
T  11087 tatttcatatgaacatctttaaataagcaatatgatctaagtttaaatagactatcaaactaatatataaattatattaaac 11006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 257
Target Start/End: Original strand, 7191 - 7347
Alignment:
Q  101 tgtcatagacttactttttaggcctgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaat 200  Q
    |||||||||||||||||||||| || || ||  |||| ||||||| ||||  ||   | |||||| |||||||| |||||||||||||| ||||||||||    
T  7191 tgtcatagacttactttttaggtcttagcctagccttatgaaagcctgattagacttgctagcctatttaaaagtctatttcatataaacatctttaaat 7290  T
Q  201 cagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaa 257  Q
     || |||| |||||||  |||||| || || | | |||||| |||||| | ||||||    
T  7291 aagtaatgcgatctaatgttaaattgactaccaagctaatagatcaatgatattaaa 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Complemental strand, 325063 - 324970
Alignment:
Q  165 tgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaatagattagcgaactaatatatcaattaaattaaac 258  Q
    ||||||||||||||||| || | || |||||||||| || ||||||||||||  ||||||||| || |||| ||||| |||||| | |||||||    
T  325063 tgtttaaaagcctattttatttgaagatctttaaataagtaatgtgatctaatgttaaatagactaacgaattaataaatcaatgatattaaac 324970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 241
Target Start/End: Complemental strand, 12064 - 11948
Alignment:
Q  125 tgagtctgaccttctgaaagcttgatatgatccgttagcctgtttaaaagcctatttcatataaatatctttaaatcagcaatgtgatctaagtttaaat 224  Q
    ||||||||||||||| ||||  | ||| |||| | ||| ||||||||||  |||| |||||| |||||||||| || | ||||||||| |||||| ||||    
T  12064 tgagtctgaccttctaaaagtctaatacgatctgctagtctgtttaaaaatctatatcatatgaatatctttatataaacaatgtgatttaagttgaaat 11965  T
Q  225 agattagcgaactaata 241  Q
    | | ||| |||||||||    
T  11964 aaactagagaactaata 11948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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