View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11482_high_57 (Length: 249)
Name: NF11482_high_57
Description: NF11482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11482_high_57 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 19243736 - 19243499
Alignment:
| Q |
1 |
ctatcttattgtcatattaccaaaagtttaagaaaatttatcactcttgcttttatagtttttgttttatcatttgattgcaaaagtttaccaccttaag |
100 |
Q |
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| T |
19243736 |
ctattttattgtcatattaccaaaagtttaagaaaatttatcactcttgcttttatagtttttgttttatcatttgattgcaaaagtttaccaccttaag |
19243637 |
T |
|
| Q |
101 |
ttaaatgcgtcaaacctgaaatctagttctgatgatgtgattaaaatttcaggcaatccattgatctgtatggtagcgtgccatcgccgaatataggatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19243636 |
ttaaatgcgtcaaacctgaaatctagttctgatgatgtgattaaaatttcaggcaatccattgatctgtatggtagcgtgccatcgccgaatataggatt |
19243537 |
T |
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| Q |
201 |
tcttggaacgacgtcattggcaagattaggcagttctt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
19243536 |
tcttggaacgacgtcattggcaagattaggcagttctt |
19243499 |
T |
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