View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11482_high_58 (Length: 249)
Name: NF11482_high_58
Description: NF11482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11482_high_58 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 969918 - 970159
Alignment:
| Q |
1 |
ctctcacaatattttcattgagaaatataaatgaagatggagcttataagtggttatgttgtggacctataaaacatatgcatgaaaggtttggagattt |
100 |
Q |
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| T |
969918 |
ctctcacaatattttcattgagaaatataaatgaagatggagcttataagtggttatgttgtggacctataaaacatatgcatggaaggtttggagattt |
970017 |
T |
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| Q |
101 |
tgatctcactagaacataaggaataaagaggtgcatcaatgttatatattgccttcctctttttcctttatatttttcatgccc----ttcttttgaaga |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |
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| T |
970018 |
tgatctcactagaacataaggaataaagaggtgcatcaatgttatatattgccttcctctttttcctttatatttttcatgcccttaattcttttgaata |
970117 |
T |
|
| Q |
197 |
aaacaaatcaagaattcatatagtgcaaagcttttccttctt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
970118 |
aaacaaatcaagaattcatatagtgcaaagcttttccttctt |
970159 |
T |
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