View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11482_high_66 (Length: 231)
Name: NF11482_high_66
Description: NF11482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11482_high_66 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 1702152 - 1702342
Alignment:
| Q |
26 |
agtagaaacatcgctcaccctcatgtctcactctcatgttccacaaaaattctggtgttatgccttccaaatggcggtgtatttaataaatcgcatgaca |
125 |
Q |
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| T |
1702152 |
agtagaaacatcgctcaccctcatgtctcactctcatgttccacaaaaattctggtgttatgccttccaaatggcggtgtatttaataaatcgcatgcca |
1702251 |
T |
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| Q |
126 |
acaacacatcttaaaaacaaatgtcctaatgaaattctgtttggttccactcctaattatcttaatcttggagtctttggatatctgtgct |
216 |
Q |
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| T |
1702252 |
acaacacatcttaaaaacaaatgtcctcatgaaattctgtttggttccactcctaattatcttaatcttcgagtctttggatgtctgtgct |
1702342 |
T |
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