View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11488_low_3 (Length: 451)

Name: NF11488_low_3
Description: NF11488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11488_low_3
NF11488_low_3
[»] chr4 (55 HSPs)
chr4 (21-433)||(5677661-5678073)
chr4 (204-404)||(5672517-5672724)
chr4 (198-404)||(27013893-27014103)
chr4 (204-404)||(5670198-5670406)
chr4 (296-404)||(40903365-40903474)
chr4 (296-404)||(48415811-48415920)
chr4 (304-404)||(15430137-15430238)
chr4 (304-404)||(15436751-15436852)
chr4 (304-404)||(19820467-19820568)
chr4 (304-404)||(24044422-24044523)
chr4 (304-404)||(24150411-24150512)
chr4 (304-404)||(29545155-29545256)
chr4 (296-389)||(37740059-37740151)
chr4 (296-404)||(38283770-38283879)
chr4 (304-404)||(39501387-39501488)
chr4 (304-404)||(48637244-48637345)
chr4 (304-389)||(19827229-19827315)
chr4 (304-404)||(40493649-40493750)
chr4 (296-404)||(40794733-40794842)
chr4 (304-404)||(52531217-52531318)
chr4 (304-406)||(15163931-15164034)
chr4 (304-387)||(48014349-48014431)
chr4 (311-404)||(21419535-21419629)
chr4 (304-404)||(27677336-27677437)
chr4 (304-404)||(34018063-34018164)
chr4 (304-404)||(52006812-52006913)
chr4 (304-394)||(19859813-19859903)
chr4 (311-404)||(8448824-8448918)
chr4 (304-389)||(35509704-35509790)
chr4 (304-404)||(3718863-3718964)
chr4 (312-404)||(8875043-8875136)
chr4 (304-404)||(12782644-12782745)
chr4 (304-404)||(15405366-15405467)
chr4 (311-404)||(22172655-22172751)
chr4 (304-404)||(34320199-34320300)
chr4 (304-404)||(44164522-44164623)
chr4 (304-404)||(53009839-53009940)
chr4 (304-404)||(56195266-56195367)
chr4 (304-387)||(27691442-27691526)
chr4 (304-394)||(19864804-19864894)
chr4 (304-394)||(53094246-53094337)
chr4 (304-404)||(11195414-11195516)
chr4 (319-404)||(33408599-33408685)
chr4 (187-389)||(37103511-37103718)
chr4 (304-404)||(5681167-5681268)
chr4 (304-404)||(15431818-15431919)
chr4 (304-404)||(15438432-15438533)
chr4 (304-404)||(25961797-25961898)
chr4 (304-404)||(29324564-29324665)
chr4 (304-404)||(33926706-33926807)
chr4 (304-404)||(46955760-46955861)
chr4 (321-394)||(33493985-33494059)
chr4 (304-404)||(44809237-44809338)
chr4 (304-376)||(18911293-18911366)
chr4 (345-404)||(15812419-15812479)
[»] chr5 (38 HSPs)
chr5 (280-404)||(31575134-31575258)
chr5 (198-389)||(28441431-28441626)
chr5 (296-404)||(26907736-26907845)
chr5 (192-404)||(21332963-21333179)
chr5 (296-389)||(7270748-7270842)
chr5 (192-404)||(21335979-21336195)
chr5 (304-404)||(17664292-17664393)
chr5 (304-404)||(26752983-26753084)
chr5 (304-404)||(30066082-30066183)
chr5 (304-404)||(40582989-40583090)
chr5 (296-389)||(33551853-33551947)
chr5 (198-404)||(22937219-22937429)
chr5 (304-404)||(26292531-26292632)
chr5 (304-404)||(26895885-26895986)
chr5 (304-404)||(41306808-41306909)
chr5 (304-404)||(41877046-41877147)
chr5 (304-385)||(34831503-34831585)
chr5 (305-390)||(563518-563603)
chr5 (305-394)||(18765932-18766021)
chr5 (304-404)||(18952433-18952534)
chr5 (271-388)||(21914830-21914946)
chr5 (304-404)||(23043905-23044005)
chr5 (304-404)||(43491495-43491596)
chr5 (304-404)||(22130005-22130105)
chr5 (304-404)||(4099798-4099904)
chr5 (311-404)||(17748187-17748281)
chr5 (304-389)||(28787619-28787705)
chr5 (304-389)||(42062661-42062747)
chr5 (304-404)||(7624842-7624943)
chr5 (304-404)||(12087698-12087799)
chr5 (304-404)||(14016420-14016521)
chr5 (304-404)||(34133264-34133365)
chr5 (304-404)||(34143495-34143596)
chr5 (235-404)||(32837691-32837859)
chr5 (311-389)||(11959466-11959545)
chr5 (304-404)||(31863439-31863541)
chr5 (312-404)||(20055522-20055615)
chr5 (311-389)||(12058788-12058867)
[»] chr1 (26 HSPs)
chr1 (311-412)||(34066714-34066815)
chr1 (235-404)||(2793901-2794070)
chr1 (271-403)||(7635354-7635486)
chr1 (311-404)||(27332052-27332145)
chr1 (187-404)||(1950736-1950957)
chr1 (304-404)||(41058583-41058684)
chr1 (304-404)||(905970-906071)
chr1 (304-404)||(20398594-20398695)
chr1 (304-404)||(49853359-49853460)
chr1 (302-404)||(45941155-45941258)
chr1 (304-389)||(673369-673455)
chr1 (295-404)||(31204570-31204680)
chr1 (304-404)||(3797107-3797208)
chr1 (296-404)||(6071235-6071344)
chr1 (304-404)||(45961026-45961127)
chr1 (304-404)||(49498779-49498880)
chr1 (304-389)||(23022220-23022306)
chr1 (304-404)||(21018748-21018848)
chr1 (304-404)||(21107572-21107673)
chr1 (304-404)||(28110798-28110898)
chr1 (304-404)||(37184145-37184246)
chr1 (311-404)||(2405258-2405352)
chr1 (319-404)||(42022431-42022517)
chr1 (296-404)||(29643502-29643611)
chr1 (305-366)||(37907565-37907626)
chr1 (311-389)||(11668322-11668401)
[»] chr8 (29 HSPs)
chr8 (250-404)||(18721563-18721717)
chr8 (198-404)||(14421371-14421582)
chr8 (192-394)||(45155561-45155768)
chr8 (250-404)||(23613224-23613378)
chr8 (248-389)||(25594954-25595095)
chr8 (304-404)||(17930718-17930819)
chr8 (304-394)||(38248690-38248781)
chr8 (304-404)||(16953513-16953614)
chr8 (296-404)||(25591760-25591869)
chr8 (304-404)||(30784666-30784767)
chr8 (244-404)||(10663577-10663737)
chr8 (296-404)||(12582737-12582846)
chr8 (304-404)||(5980594-5980695)
chr8 (304-404)||(8911384-8911485)
chr8 (304-404)||(36710918-36711019)
chr8 (304-404)||(43682152-43682253)
chr8 (304-389)||(21280065-21280151)
chr8 (304-388)||(5614025-5614110)
chr8 (304-404)||(18824676-18824777)
chr8 (311-391)||(31284414-31284495)
chr8 (304-404)||(33419393-33419494)
chr8 (311-404)||(10498495-10498589)
chr8 (319-404)||(23619645-23619731)
chr8 (304-404)||(18826169-18826270)
chr8 (296-404)||(22174205-22174314)
chr8 (353-404)||(5539055-5539106)
chr8 (304-389)||(23643556-23643642)
chr8 (323-391)||(25230836-25230905)
chr8 (310-389)||(13196600-13196680)
[»] scaffold0233 (1 HSPs)
scaffold0233 (311-401)||(9685-9775)
[»] chr6 (38 HSPs)
chr6 (244-411)||(28848523-28848691)
chr6 (304-394)||(28108080-28108171)
chr6 (296-404)||(9953697-9953806)
chr6 (304-404)||(13021536-13021635)
chr6 (304-394)||(14281812-14281903)
chr6 (198-404)||(5738366-5738576)
chr6 (304-404)||(10289714-10289815)
chr6 (304-404)||(11125977-11126078)
chr6 (304-404)||(11188197-11188298)
chr6 (304-404)||(11401998-11402099)
chr6 (304-392)||(28112058-28112147)
chr6 (305-404)||(23388378-23388478)
chr6 (304-389)||(30655185-30655271)
chr6 (304-404)||(3597063-3597164)
chr6 (271-404)||(12988407-12988539)
chr6 (304-394)||(5259678-5259769)
chr6 (304-394)||(6512994-6513084)
chr6 (311-404)||(24399928-24400022)
chr6 (304-404)||(2378971-2379072)
chr6 (304-389)||(11192876-11192960)
chr6 (304-404)||(19475744-19475845)
chr6 (304-404)||(26942716-26942817)
chr6 (312-389)||(2846051-2846129)
chr6 (311-404)||(18856306-18856400)
chr6 (295-404)||(22561445-22561555)
chr6 (304-389)||(28665560-28665646)
chr6 (312-404)||(1126017-1126110)
chr6 (304-404)||(4512214-4512315)
chr6 (304-404)||(20185486-20185587)
chr6 (304-404)||(22150404-22150505)
chr6 (340-404)||(24371052-24371116)
chr6 (304-394)||(13004930-13005021)
chr6 (311-389)||(24410048-24410127)
chr6 (304-389)||(9839691-9839777)
chr6 (304-389)||(26898165-26898251)
chr6 (311-404)||(28230343-28230437)
chr6 (304-404)||(31072046-31072147)
chr6 (336-404)||(13946792-13946861)
[»] chr2 (46 HSPs)
chr2 (280-404)||(35521647-35521771)
chr2 (296-406)||(31586221-31586332)
chr2 (296-404)||(5105440-5105549)
chr2 (248-404)||(26365599-26365756)
chr2 (235-404)||(29440177-29440346)
chr2 (304-389)||(43723423-43723509)
chr2 (296-404)||(9185707-9185816)
chr2 (304-404)||(42368993-42369094)
chr2 (304-404)||(6826494-6826595)
chr2 (296-404)||(9188935-9189044)
chr2 (304-404)||(25959971-25960072)
chr2 (296-404)||(43208172-43208281)
chr2 (296-404)||(10600659-10600769)
chr2 (304-404)||(11348178-11348279)
chr2 (304-404)||(12219517-12219618)
chr2 (304-404)||(16178849-16178950)
chr2 (304-404)||(22630563-22630664)
chr2 (304-404)||(24234817-24234918)
chr2 (304-404)||(24238089-24238190)
chr2 (304-404)||(25821128-25821229)
chr2 (304-404)||(25870506-25870607)
chr2 (304-404)||(25873897-25873998)
chr2 (304-404)||(30926269-30926370)
chr2 (244-404)||(36808724-36808884)
chr2 (304-404)||(37279959-37280060)
chr2 (304-404)||(40781194-40781295)
chr2 (199-389)||(25139229-25139423)
chr2 (304-404)||(8888357-8888459)
chr2 (311-404)||(16791041-16791135)
chr2 (311-404)||(40259421-40259515)
chr2 (304-404)||(13972176-13972277)
chr2 (304-404)||(17876293-17876394)
chr2 (304-394)||(22020790-22020880)
chr2 (311-404)||(1386704-1386798)
chr2 (304-389)||(17876828-17876914)
chr2 (311-404)||(37937501-37937595)
chr2 (304-404)||(27266510-27266611)
chr2 (304-404)||(33310388-33310489)
chr2 (304-404)||(38015240-38015341)
chr2 (304-404)||(45453596-45453697)
chr2 (319-404)||(5666255-5666341)
chr2 (304-389)||(45456883-45456969)
chr2 (316-404)||(3875020-3875109)
chr2 (304-404)||(31427824-31427925)
chr2 (336-404)||(30275051-30275120)
chr2 (317-400)||(6298203-6298287)
[»] scaffold0035 (2 HSPs)
scaffold0035 (235-404)||(62187-62358)
scaffold0035 (304-381)||(63608-63686)
[»] scaffold0034 (1 HSPs)
scaffold0034 (319-427)||(48661-48769)
[»] chr3 (69 HSPs)
chr3 (244-404)||(9392502-9392660)
chr3 (271-389)||(11636626-11636743)
chr3 (304-404)||(2873389-2873490)
chr3 (296-404)||(3840333-3840442)
chr3 (304-404)||(30690561-30690662)
chr3 (296-404)||(49743188-49743297)
chr3 (305-394)||(27298740-27298830)
chr3 (248-389)||(55035143-55035284)
chr3 (304-404)||(2775306-2775407)
chr3 (304-404)||(2778549-2778650)
chr3 (304-404)||(7486395-7486496)
chr3 (311-404)||(22360278-22360371)
chr3 (311-404)||(22370181-22370274)
chr3 (304-404)||(24125324-24125425)
chr3 (304-404)||(24128601-24128702)
chr3 (304-404)||(25584512-25584613)
chr3 (321-394)||(27308300-27308373)
chr3 (304-404)||(34984121-34984222)
chr3 (304-404)||(52199738-52199839)
chr3 (304-404)||(54719796-54719897)
chr3 (304-404)||(54723566-54723667)
chr3 (304-404)||(17544441-17544541)
chr3 (304-394)||(32287602-32287693)
chr3 (304-389)||(16243698-16243784)
chr3 (305-404)||(18542376-18542477)
chr3 (248-404)||(6435046-6435202)
chr3 (304-404)||(11190351-11190452)
chr3 (311-404)||(22993967-22994060)
chr3 (248-404)||(28265650-28265806)
chr3 (296-404)||(29344143-29344252)
chr3 (304-404)||(41976840-41976941)
chr3 (304-404)||(43809404-43809505)
chr3 (304-404)||(43926660-43926761)
chr3 (304-404)||(45896205-45896306)
chr3 (304-391)||(46884777-46884865)
chr3 (244-384)||(10884624-10884764)
chr3 (307-404)||(17529025-17529123)
chr3 (304-389)||(20728930-20729016)
chr3 (251-404)||(35412288-35412441)
chr3 (304-385)||(52309845-52309927)
chr3 (243-404)||(53815593-53815754)
chr3 (304-404)||(8461755-8461856)
chr3 (304-404)||(10106867-10106968)
chr3 (304-404)||(11784590-11784691)
chr3 (304-404)||(17141233-17141334)
chr3 (304-404)||(22417102-22417203)
chr3 (304-404)||(28008338-28008439)
chr3 (304-404)||(50461817-50461918)
chr3 (313-404)||(31857650-31857742)
chr3 (308-397)||(38386815-38386905)
chr3 (302-404)||(27091717-27091820)
chr3 (319-404)||(538666-538752)
chr3 (304-389)||(15195585-15195671)
chr3 (311-404)||(52988237-52988331)
chr3 (304-404)||(19301773-19301874)
chr3 (304-404)||(19304957-19305058)
chr3 (304-388)||(22783417-22783502)
chr3 (304-388)||(22787781-22787866)
chr3 (304-404)||(32367397-32367498)
chr3 (304-389)||(3293244-3293330)
chr3 (311-404)||(12561502-12561596)
chr3 (319-404)||(25443128-25443214)
chr3 (304-389)||(30220292-30220378)
chr3 (304-404)||(16184956-16185057)
chr3 (304-404)||(35751279-35751380)
chr3 (312-404)||(48064303-48064396)
chr3 (317-364)||(27308887-27308934)
chr3 (311-404)||(10881312-10881406)
chr3 (304-404)||(17040290-17040391)
[»] scaffold0381 (1 HSPs)
scaffold0381 (198-404)||(5680-5891)
[»] chr7 (30 HSPs)
chr7 (304-406)||(3068261-3068364)
chr7 (304-404)||(4546596-4546697)
chr7 (304-404)||(23225192-23225293)
chr7 (235-384)||(26557158-26557308)
chr7 (304-404)||(4695251-4695352)
chr7 (304-404)||(8276712-8276813)
chr7 (304-404)||(9133046-9133147)
chr7 (304-404)||(22611893-22611994)
chr7 (304-404)||(37166433-37166534)
chr7 (304-389)||(4596310-4596396)
chr7 (243-404)||(45287355-45287516)
chr7 (304-404)||(10468871-10468972)
chr7 (304-404)||(13450062-13450163)
chr7 (304-404)||(14683730-14683831)
chr7 (304-404)||(17730541-17730642)
chr7 (304-404)||(26136414-26136515)
chr7 (304-404)||(26144794-26144895)
chr7 (319-390)||(24917938-24918009)
chr7 (312-389)||(5242454-5242532)
chr7 (304-404)||(6603185-6603286)
chr7 (304-404)||(7227254-7227355)
chr7 (304-404)||(13809799-13809900)
chr7 (304-404)||(13842367-13842468)
chr7 (304-404)||(16165475-16165576)
chr7 (304-404)||(5796280-5796379)
chr7 (271-389)||(18562835-18562952)
chr7 (304-404)||(20081004-20081105)
chr7 (304-404)||(48645201-48645302)
chr7 (321-404)||(20594007-20594091)
chr7 (304-404)||(9865013-9865114)
[»] scaffold0427 (1 HSPs)
scaffold0427 (304-404)||(4070-4171)
[»] scaffold0250 (1 HSPs)
scaffold0250 (304-404)||(19135-19236)
[»] scaffold0048 (1 HSPs)
scaffold0048 (304-404)||(24561-24662)
[»] scaffold0757 (1 HSPs)
scaffold0757 (296-389)||(5084-5178)
[»] scaffold0065 (1 HSPs)
scaffold0065 (304-404)||(58964-59065)
[»] scaffold0056 (1 HSPs)
scaffold0056 (304-404)||(67806-67907)
[»] scaffold0321 (1 HSPs)
scaffold0321 (304-389)||(3308-3394)
[»] scaffold0962 (1 HSPs)
scaffold0962 (244-404)||(3564-3723)
[»] scaffold0191 (1 HSPs)
scaffold0191 (304-404)||(1486-1587)
[»] scaffold0080 (1 HSPs)
scaffold0080 (244-356)||(26869-26980)
[»] scaffold0334 (1 HSPs)
scaffold0334 (304-404)||(19095-19197)
[»] scaffold0807 (1 HSPs)
scaffold0807 (304-385)||(2373-2455)
[»] scaffold0520 (2 HSPs)
scaffold0520 (304-389)||(8515-8601)
scaffold0520 (304-389)||(4276-4362)
[»] scaffold0084 (2 HSPs)
scaffold0084 (311-404)||(19042-19136)
scaffold0084 (311-404)||(29112-29206)
[»] scaffold0038 (1 HSPs)
scaffold0038 (311-404)||(30841-30935)
[»] scaffold0045 (1 HSPs)
scaffold0045 (304-404)||(89509-89610)
[»] scaffold0005 (1 HSPs)
scaffold0005 (304-404)||(292763-292864)
[»] scaffold0066 (1 HSPs)
scaffold0066 (307-404)||(57871-57969)
[»] scaffold0002 (1 HSPs)
scaffold0002 (311-404)||(118727-118821)
[»] scaffold0187 (1 HSPs)
scaffold0187 (305-366)||(31451-31512)
[»] scaffold1785 (1 HSPs)
scaffold1785 (304-381)||(998-1076)
[»] scaffold0024 (1 HSPs)
scaffold0024 (304-333)||(84980-85009)


Alignment Details
Target: chr4 (Bit Score: 393; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 21 - 433
Target Start/End: Complemental strand, 5678073 - 5677661
Alignment:
Q  21 cacagacagagaagcattcacgttttttggaggcggaatcaaagaaaaaacaagaaaccacacgagcagaagctatcacgttttggaagggagaaaaaca 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5678073 cacacacagagaagcattcacgttttttggaggcggaatcaaagaaaaaacaagaaaccacacgagcagaagctatcacgttttgaaagggagaaaaaca 5677974  T
Q  121 caacacgcacaacgagaagagaagcacatggatatgggaagacaacacgcatcggaaagtaattgagagcaaagccagcaacgacggaattcgatcagtt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5677973 caacacgcacaacgagaagagaagcacatggatatgggaagacaacacgcatcggaaagtaattgagagcaaagccagcaacgacggaattcgatcagtt 5677874  T
Q  221 tatttcctttgctatgtttattttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttg 320  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5677873 tatttcctttactatgtttattctttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactctgattgaaccatgttgttg 5677774  T
Q  321 tgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataatctgaatcagtgagat 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5677773 tgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataatctgaatcagtgagat 5677674  T
Q  421 tgtatgagattgc 433  Q
    |||||||||||||    
T  5677673 tgtatgagattgc 5677661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 404
Target Start/End: Original strand, 5672517 - 5672724
Alignment:
Q  204 acggaattcgatcagtttatttcctttgctatgtt---tattt-tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataac 299  Q
    |||||| || ||| |||||||| ||||||||||||   ||||| ||| ||||||| |||||||||||||||||||| || |||||||| |||||  ||||    
T  5672517 acggaactctatcggtttattttctttgctatgttgtttatttctttaatcatgtctagctaattttctttgattaggtctgagatgattctggtgtaac 5672616  T
Q  300 tcttattgaaccatgttgttgtgaaactctatttcctgtgaatat--caatctag-ttttactcaattcatctgttcttaatgctttttatatattgatc 396  Q
      | |||||||||||||| |||||||||||||||  |||||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||    
T  5672617 cttaattgaaccatgttgctgtgaaactctatttattgtgaatatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatc 5672716  T
Q  397 acatataa 404  Q
    | ||||||    
T  5672717 aaatataa 5672724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 198 - 404
Target Start/End: Original strand, 27013893 - 27014103
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgctatgtt---tatt-ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctgg 293  Q
    |||||||||||| || |||  ||||||| |||| |||||||   |||| |||| ||||||| |||||||||| ||||||||| || |||||||| ||| |    
T  27013893 gcaacgacggaactctatcgatttattttctttactatgttgtttattattttaatcatgtctagctaatttcctttgattaggtctgagatga-tcttg 27013991  T
Q  294 aataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatatt 392  Q
      |||| ||||||||||||||||||||||||| |||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |    
T  27013992 tgtaacccttattgaaccatgttgttgtgaaaatctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatattct 27014091  T
Q  393 gatcacatataa 404  Q
    ||||| ||||||    
T  27014092 gatcaaatataa 27014103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 204 - 404
Target Start/End: Original strand, 5670198 - 5670406
Alignment:
Q  204 acggaattcgatcagtttatttcctttgctatgtt---tattt-tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataac 299  Q
    |||||| || ||| |||||||| ||||||||||||   ||||| ||| ||||||| |||||||||| ||||||||| || |||||||| |||||  ||||    
T  5670198 acggaactctatcggtttattttctttgctatgttgtttatttctttaatcatgtctagctaatttcctttgattaggtctgagatgattctggtgtaac 5670297  T
Q  300 tctta-ttgaaccatgttgttgtgaaactctatttcctgtgaatat--caatctagtttt-actcaattcatctgttcttaatgctttttatatattgat 395  Q
      ||| ||||||||| ||| |||||||||||||||  |||||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  ||||    
T  5670298 ctttaattgaaccatattgctgtgaaactctatttattgtgaatatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgat 5670397  T
Q  396 cacatataa 404  Q
    || ||||||    
T  5670398 caaatataa 5670406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 40903474 - 40903365
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  40903474 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctga 40903375  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  40903374 tcaaatataa 40903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 48415920 - 48415811
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  48415920 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 48415821  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  48415820 tcaaatataa 48415811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 15430238 - 15430137
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  | |||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  15430238 attgaaccatgttgttgtgaaactctatttattgtgaatgactatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 15430139  T
Q  403 aa 404  Q
    ||    
T  15430138 aa 15430137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 15436852 - 15436751
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  | |||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  15436852 attgaaccatgttgttgtgaaactctatttattgtgaatgactatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 15436753  T
Q  403 aa 404  Q
    ||    
T  15436752 aa 15436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 19820467 - 19820568
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  19820467 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 19820566  T
Q  403 aa 404  Q
    ||    
T  19820567 aa 19820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 24044523 - 24044422
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  24044523 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 24044424  T
Q  403 aa 404  Q
    ||    
T  24044423 aa 24044422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24150411 - 24150512
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  24150411 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 24150510  T
Q  403 aa 404  Q
    ||    
T  24150511 aa 24150512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 29545256 - 29545155
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  29545256 attgaaacatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 29545157  T
Q  403 aa 404  Q
    ||    
T  29545156 aa 29545155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 37740151 - 37740059
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| |||||| ||||||||||||||||||||||   ||||||||| |||||||||||| ||||||||  |||| ||||||||||||||||    
T  37740151 taactctaattgaatcatgttgttgtgaaactctattat-tgtgaatattaatctagttttattcaattcaattgttgttaatgctttttatat 37740059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 38283879 - 38283770
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||| ||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  38283879 taacccttgttgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 38283780  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  38283779 tcaaatataa 38283770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 39501387 - 39501488
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  39501387 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 39501486  T
Q  403 aa 404  Q
    ||    
T  39501487 aa 39501488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 48637244 - 48637345
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  48637244 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 48637343  T
Q  403 aa 404  Q
    ||    
T  48637344 aa 48637345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 19827229 - 19827315
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  19827229 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 19827315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 40493750 - 40493649
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  40493750 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 40493651  T
Q  403 aa 404  Q
    ||    
T  40493650 aa 40493649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 40794733 - 40794842
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| |||||||||||||| |||||||||||||||  |||||||  |||| ||| ||||| |||||||   |||||||||||||||||||||  |||    
T  40794733 taactctaattgaaccatgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcgattgttcttaatgctttttatatcctga 40794832  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  40794833 tcaaatataa 40794842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 52531318 - 52531217
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||| ||||||||||||||  |||||| ||||    
T  52531318 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttctgaatgctttttatatcctgatcaaatat 52531219  T
Q  403 aa 404  Q
    ||    
T  52531218 aa 52531217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 406
Target Start/End: Original strand, 15163931 - 15164034
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| |||||||   ||||||||||| |||||||||  |||||| ||||    
T  15163931 attgaaccatgttgctgtgaaactctatttattgtgaattacaatctagtttttattcaattctattgttcttaatgttttttatatcctgatcaaatat 15164030  T
Q  403 aatc 406  Q
    ||||    
T  15164031 aatc 15164034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 48014431 - 48014349
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttat 387  Q
    |||||||||||||| ||||||||| ||||   ||| |||||||||||||||||| ||||||||  |||||||||||||||||||    
T  48014431 attgaaccatgttgctgtgaaactatattat-tgtcaatatcaatctagttttattcaattcaattgttcttaatgctttttat 48014349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 21419535 - 21419629
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  21419535 catgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 21419629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 27677437 - 27677336
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||  ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  27677437 attgaaccatgttgatgtgaaactctatttattgtgaatgacaatctagtttttgttcaattcaattgttcttaatgttttttatatcctgatcaaatat 27677338  T
Q  403 aa 404  Q
    ||    
T  27677337 aa 27677336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 34018164 - 34018063
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  || ||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  34018164 attgaaccatgttgctgtgaaactctatttattgtgaatgacagtctagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatat 34018065  T
Q  403 aa 404  Q
    ||    
T  34018064 aa 34018063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 52006913 - 52006812
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| ||||||||||||| |  |||||||  |||||||| ||||| |||||||   ||||||||||| ||||||||| ||||||| ||||    
T  52006913 attgaaccatgttgctgtgaaactctatctattgtgaatgacaatctagtttttattcaattcgattgttcttaatgttttttatatcttgatcaaatat 52006814  T
Q  403 aa 404  Q
    ||    
T  52006813 aa 52006812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 19859903 - 19859813
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| |||||| |||||||||||||||  |||||||  || ||||||||| | ||||||||  ||||||||||||||||||||||||||    
T  19859903 attgaactatgttgctgtgaaactctatttattgtgaatgaca-tctagtttttattcaattcaattgttcttaatgctttttatatattga 19859813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 8448918 - 8448824
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  | || |||||||||||||||| ||||||| ||||||    
T  8448918 catgttgatgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattattgttaatgctttttatatcttgatcaaatataa 8448824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 35509704 - 35509790
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| |||||||||||||||  |||||||   ||||||| ||||| ||||||||  |||||||||||||||||||||    
T  35509704 attgaaacatgttgatgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatat 35509790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 3718863 - 3718964
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||| ||| |||||||||||||||  |||||||   ||||||| ||||| ||||||||  |||||||||| ||||||||||  |||||| ||||    
T  3718863 attgaaccatattgctgtgaaactctatttattgtgaatgaaaatctagtttttattcaattcaattgttcttaatactttttatatcctgatcaaatat 3718962  T
Q  403 aa 404  Q
    ||    
T  3718963 aa 3718964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 404
Target Start/End: Complemental strand, 8875136 - 8875043
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||   ||||||| ||||||    
T  8875136 atgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatcacttgatcaaatataa 8875043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 12782644 - 12782745
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  ||||| |  |||||| | ||||| ||| ||||  |||||||||| ||||||||||  |||||| ||||    
T  12782644 attgaaccatgttgttgtgaaactctatttattgtgagtgacaatcttgtttttattcatttcagttgttcttaatactttttatattctgatcaaatat 12782743  T
Q  403 aa 404  Q
    ||    
T  12782744 aa 12782745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 15405467 - 15405366
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  15405467 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcgtgatcaaatat 15405368  T
Q  403 aa 404  Q
    ||    
T  15405367 aa 15405366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 22172751 - 22172655
Alignment:
Q  311 catgttgttgtgaaactctatttcctgt--gaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||||||| |||| | |  |||||||||| ||||||| | ||||||||  |||| |||||| |||||||||| |||||||||||||    
T  22172751 catgttgttgtgaaactctgtttcatatatgaatatcaatatagttttgattcaattcaattgttattaatgatttttatatactgatcacatataa 22172655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 34320300 - 34320199
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  34320300 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 34320201  T
Q  403 aa 404  Q
    ||    
T  34320200 aa 34320199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 44164522 - 44164623
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | | ||||  ||||||||||| |||||||||  |||||| ||||    
T  44164522 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttatttatttcaattgttcttaatgttttttatattctgatcaaatat 44164621  T
Q  403 aa 404  Q
    ||    
T  44164622 aa 44164623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 53009940 - 53009839
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatcta-gttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||   |||||| |||||| ||||||||  |||||||||| ||||||||||  |||||| ||||    
T  53009940 attgaaacatgttgctgtgaaactctatttattgtgaatgataatctaggttttattcaattcaattgttcttaatactttttatatcctgatcaaatat 53009841  T
Q  403 aa 404  Q
    ||    
T  53009840 aa 53009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 56195266 - 56195367
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  56195266 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 56195365  T
Q  403 aa 404  Q
    ||    
T  56195366 aa 56195367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 27691526 - 27691442
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttat 387  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||    
T  27691526 attgaatcatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttat 27691442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 19864894 - 19864804
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatct-agttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||||||||| | |||||||||||||||  |||||||  | |||| | ||||| ||||||||  ||||||||||||||||||||||||||    
T  19864894 attgaaccatgtagctgtgaaactctatttattgtgaatgac-atctaatttttattcaattcaattgttcttaatgctttttatatattga 19864804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 53094246 - 53094337
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||| ||||||| ||||||||||||| |  |||||||  ||||||| |||| | |||||| |  ||||||||||||||||||||||||||    
T  53094246 attgaaacatgttgctgtgaaactctatctattgtgaatgacaatctaatttttattcaattaaattgttcttaatgctttttatatattga 53094337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 11195414 - 11195516
Alignment:
Q  304 attgaaccatgttgttgtgaaa-ctctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacata 401  Q
    |||||||||||||| ||||||| ||||||||  ||||| |  |||||| ||||| | ||||||||  |||||||||||||||||||||  |||||| |||    
T  11195414 attgaaccatgttgctgtgaaaactctatttattgtgagtgacaatctggtttttattcaattcaattgttcttaatgctttttatatcatgatcaaata 11195513  T
Q  402 taa 404  Q
    |||    
T  11195514 taa 11195516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 404
Target Start/End: Complemental strand, 33408685 - 33408599
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||  |||||||  |||||||||||| | |||| |||  |||||||||||||||||||||  |||||| ||||||    
T  33408685 tgtgaaactctatttattgtgaatgacaatctagtttttattcaactcaattgttcttaatgctttttatatcctgatcagatataa 33408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 389
Target Start/End: Complemental strand, 37103718 - 37103511
Alignment:
Q  187 gagcaaagccagcaacgacggaattcgatcagtttatttcctttgctatgtt---tatt-ttttgatcatgtttagctaattttcttt-gattaagtgtg 281  Q
    |||||||||| |||||| || || || ||| |||||||| ||||  ||||||   |||| |||| ||||||| ||||||||||||||| |||||| | ||    
T  37103718 gagcaaagccggcaacggcgaaactctatcggtttattttctttattatgttgtttattctttttatcatgtctagctaattttcttttgattaaatctg 37103619  T
Q  282 agatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgc 380  Q
    |||||| |||    |||  || |||||||||||||| ||  |||||||||||  |||||||  |||||||| ||||| ||||||||  |||| |||||||    
T  37103618 agatgattctttg-taatcctaattgaaccatgttgctggtaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttattaatgc 37103520  T
Q  381 tttttatat 389  Q
    ||| |||||    
T  37103519 tttatatat 37103511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 5681167 - 5681268
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||| ||| |||||||||| ||||  |||||||  |||||||||||| | ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  5681167 attgaatcatattgctgtgaaactcaatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatat 5681266  T
Q  403 aa 404  Q
    ||    
T  5681267 aa 5681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 15431818 - 15431919
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||| ||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  15431818 attgatccatgttgctgtgaaactctatttattattaatgacaatttagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatat 15431917  T
Q  403 aa 404  Q
    ||    
T  15431918 aa 15431919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 15438432 - 15438533
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||| ||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  15438432 attgatccatgttgctgtgaaactctatttattattaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 15438531  T
Q  403 aa 404  Q
    ||    
T  15438532 aa 15438533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 25961797 - 25961898
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||| ||||   |||||||  |||||||||||| | ||||||||  ||||||||| |||||||||||  |||||| ||||    
T  25961797 attgaaacatgttgctgtgaaactatattaattgtgaatgacaatctagtttttattcaattcaattgttcttaaagctttttatatcctgatcaaatat 25961896  T
Q  403 aa 404  Q
    ||    
T  25961897 aa 25961898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 29324564 - 29324665
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||| ||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  29324564 attgatccatgttgctgtgaaactcgatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 29324663  T
Q  403 aa 404  Q
    ||    
T  29324664 aa 29324665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 33926706 - 33926807
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||| ||| ||||| ||||||||  ||||||| |||||||||||||  |||||| ||||    
T  33926706 attgatccatgttgttgtgaaactctatttattattaatgacaatttagtttttattcaattcaattgttcttgatgctttttatatcctgatcaaatat 33926805  T
Q  403 aa 404  Q
    ||    
T  33926806 aa 33926807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 46955861 - 46955760
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | |||||| |  |||||||||||||||||||||  |||||| ||||    
T  46955861 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaatttaattgttcttaatgctttttatattatgatcaaatat 46955762  T
Q  403 aa 404  Q
    ||    
T  46955761 aa 46955760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 33494059 - 33493985
Alignment:
Q  321 tgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatg-ctttttatatattga 394  Q
    |||||||||||||| | ||||||||||| |||||||| | ||||||  |||| ||||||  ||||||||||||||    
T  33494059 tgaaactctatttcatatgaatatcaatttagttttatttaattcaattgttgttaatgtttttttatatattga 33493985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 44809338 - 44809237
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaatt-catctgttcttaatgctttttatatattgatcacata 401  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | |||||| ||| |||||||||||||||||||||  |||||| |||    
T  44809338 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaatttcat-tgttcttaatgctttttatatcctgatcaaata 44809240  T
Q  402 taa 404  Q
    |||    
T  44809239 taa 44809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 376
Target Start/End: Original strand, 18911293 - 18911366
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttctta 376  Q
    |||||||||||||| |||||||||||||||  |||||||  |||| ||| ||||| ||||||||  ||||||||    
T  18911293 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatttagtttttattcaattcaattgttctta 18911366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 15812479 - 15812419
Alignment:
Q  345 caatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  15812479 caatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatataa 15812419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 31575134 - 31575258
Alignment:
Q  280 tgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatg 379  Q
    |||||||||||||   |||| ||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||  ||||| |||||    
T  31575134 tgagatgaatctgatgtaaccctatttgaaccatgttgttgtgaaactctatttcatgtgaatatcaatctagttttatttaattcaattgttcataatg 31575233  T
Q  380 ctttttatatattgatcacatataa 404  Q
    ||||||||||| |||||||||||||    
T  31575234 ctttttatatactgatcacatataa 31575258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 198 - 389
Target Start/End: Complemental strand, 28441626 - 28441431
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgcta---tgtttattttttgat-catgtttagctaattttctttgattaagtgtgagatgaatctgg 293  Q
    |||||||||||| || ||| |||||||| |||| |||   ||||||||| || || ||||| |||||||||| ||| ||||| || |||||||| ||||     
T  28441626 gcaacgacggaactctatcggtttattttctttactacgttgtttatttctttattcatgtctagctaatttccttggattaggtctgagatgactctgt 28441527  T
Q  294 aataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    | ||||||| |||||| |||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||  |||||||||    
T  28441526 a-taactctaattgaaacatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatattttttatat 28441431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 26907845 - 26907736
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| |||||| |||||||||||||||||||||||  |||||||  |||||||||||| | ||||||||  ||||||||||||||||||||| ||||    
T  26907845 taactctaattgaaacatgttgttgtgaaactctatttattgtgaatgacaatctagttttaattcaattcaattgttcttaatgctttttatatcttga 26907746  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  26907745 tcaaatataa 26907736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 192 - 404
Target Start/End: Complemental strand, 21333179 - 21332963
Alignment:
Q  192 aagccagcaacgacggaattcgatcagtttatttcctttgctatgtt---tattt-tttgatcatgtttagctaattttctttgattaagtgtgagatga 287  Q
    ||||| ||| |||||||| || ||| |||||||| |||| |||||||   ||||  ||| || |||| ||||||||||||   |||||||| ||||||||    
T  21333179 aagccggcagcgacggaactctatcggtttattttctttactatgttgtttattccttttattatgtctagctaattttcagagattaagtctgagatga 21333080  T
Q  288 atctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgcttttta 386  Q
     ||||   |||| || ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  || |||||||||||||||    
T  21333079 ttctgtg-taaccctaattgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgctcttaatgcttttta 21332981  T
Q  387 tatattgatcacatataa 404  Q
    |||  |||||| ||||||    
T  21332980 tatcatgatcaaatataa 21332963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 7270748 - 7270842
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttt-tactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||  ||||||||||| || ||||||||  |||||||||||||||||||||    
T  7270748 taactctaattgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttctattcaattcaattgttcttaatgctttttatat 7270842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 404
Target Start/End: Complemental strand, 21336195 - 21335979
Alignment:
Q  192 aagccagcaacgacggaattcgatcagtttatttcctttgctatgtt---tattt-tttgatcatgtttagctaattttctttgattaagtgtgagatga 287  Q
    ||||| ||| |||||||| || ||| |||||||| |||| |||||||   ||||  ||| || |||| ||||||||||||   |||||||| ||||||||    
T  21336195 aagccggcagcgacggaactctatcggtttattttctttactatgttgtttattccttttattatgtctagctaattttcagagattaagtctgagatga 21336096  T
Q  288 atctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgcttttta 386  Q
     ||||   |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||||||| | ||||||||  || |||||||||||||||    
T  21336095 ttctgtg-taaccctaattgaaccatgttgctgtgaaactctatttattgtgaataacaatatagttttaattcaattcaattgctcttaatgcttttta 21335997  T
Q  387 tatattgatcacatataa 404  Q
    |||  |||||| ||||||    
T  21335996 tatcctgatcaaatataa 21335979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 17664292 - 17664393
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  17664292 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 17664391  T
Q  403 aa 404  Q
    ||    
T  17664392 aa 17664393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 26753084 - 26752983
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  26753084 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 26752985  T
Q  403 aa 404  Q
    ||    
T  26752984 aa 26752983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30066082 - 30066183
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  | ||||||||||||||||||| ||||||| ||||    
T  30066082 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattattcttaatgctttttatatcttgatcaaatat 30066181  T
Q  403 aa 404  Q
    ||    
T  30066182 aa 30066183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 40582989 - 40583090
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  40582989 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 40583088  T
Q  403 aa 404  Q
    ||    
T  40583089 aa 40583090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 33551853 - 33551947
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| |||||||||||||| |||||||||||||||  |||||||  |||| ||| ||||| ||||||||  |||||||||||||||||||||    
T  33551853 taactctaattgaaccatgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaattgttcttaatgctttttatat 33551947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 404
Target Start/End: Complemental strand, 22937429 - 22937219
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgctatgtt---tatt-ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctgg 293  Q
    |||||||||||| || ||| |||||||| |||| |||||||   |||| |||| ||||||| ||||||||||   ||||||| || |||||||| | ||     
T  22937429 gcaacgacggaactctatcggtttattttctttactatgttgtttattattttaatcatgtctagctaatttctcttgattaggtctgagatgattttgt 22937330  T
Q  294 aataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatatt 392  Q
      |||  || ||||||||| |||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||| ||||||||  |    
T  22937329 g-taatcctaattgaaccaagttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgcattttatatcct 22937231  T
Q  393 gatcacatataa 404  Q
    ||||| ||||||    
T  22937230 gatcaaatataa 22937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 26292531 - 26292632
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||| || |||||||  |||||| ||||    
T  26292531 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatactatttatatcctgatcaaatat 26292630  T
Q  403 aa 404  Q
    ||    
T  26292631 aa 26292632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 26895986 - 26895885
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttt-tactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  ||||||||||| || | ||||||  ||||||||||||||||||||| ||||||| ||||    
T  26895986 attgatccatgttgctgtgaaactctatttattgtgaatgacaatctagtttctatttaattcagttgttcttaatgctttttatatcttgatcaaatat 26895887  T
Q  403 aa 404  Q
    ||    
T  26895886 aa 26895885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 41306909 - 41306808
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatct-agttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||| | ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  41306909 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctaatttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 41306810  T
Q  403 aa 404  Q
    ||    
T  41306809 aa 41306808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 41877147 - 41877046
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  41877147 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgtttttaatgctttttatatcctgatcaaatat 41877048  T
Q  403 aa 404  Q
    ||    
T  41877047 aa 41877046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 385
Target Start/End: Original strand, 34831503 - 34831585
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgcttttt 385  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||    
T  34831503 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgcttttt 34831585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 563603 - 563518
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatata 390  Q
    ||||| ||||| |||||||||||||||| | ||||||||| ||| |||||||| |||||| |  |||||||||| |||||||||||    
T  563603 ttgaaacatgtggttgtgaaactctattgcatgtgaatattaatatagttttattcaatttaattgttcttaatactttttatata 563518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 18766021 - 18765932
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||| ||||| | ||||||||| |||| | |||| |||| |||||||||||| ||||||||  |||| |||||||||||||||||||||    
T  18766021 ttgaaacatgtggctgtgaaactttattgcttgtgcatattaatctagttttattcaattcaattgtttttaatgctttttatatattga 18765932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 18952433 - 18952534
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  18952433 attgatccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgtttttaatgctttttatattctgatcaaatat 18952532  T
Q  403 aa 404  Q
    ||    
T  18952533 aa 18952534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 388
Target Start/End: Original strand, 21914830 - 21914946
Alignment:
Q  271 gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctg 370  Q
    ||||| || |||||||| ||||   |||| || |||||||||||||| | ||||||||||||   |||||| ||||||||||||||| ||||||||  ||    
T  21914830 gattaggtctgagatgattctgatgtaaccctaattgaaccatgttgctatgaaactctattat-tgtgaaaatcaatctagttttattcaattcaattg 21914928  T
Q  371 ttcttaatgctttttata 388  Q
    ||||||||| ||||||||    
T  21914929 ttcttaatgatttttata 21914946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 23043905 - 23044005
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||||| ||||| |||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  23043905 attgaaccatgttgttatgaaa-tctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 23044003  T
Q  403 aa 404  Q
    ||    
T  23044004 aa 23044005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 43491495 - 43491596
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||||||||||||||||||||  |||||||  |||| ||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  43491495 attgaaacatgttgttgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaattgttattaatgctttttatatcctgatcaaatat 43491594  T
Q  403 aa 404  Q
    ||    
T  43491595 aa 43491596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 22130005 - 22130105
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatata 403  Q
    ||||| |||| ||| |||||||||||||||  | |||||  ||||||||||||  ||||||||  |||||||||||||||||||||  |||||| |||||    
T  22130005 attgatccatattgctgtgaaactctatttattatgaatgacaatctagtttttatcaattcaattgttcttaatgctttttatatcctgatcaaatata 22130104  T
Q  404 a 404  Q
    |    
T  22130105 a 22130105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 4099904 - 4099798
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt------actcaattcatctgttcttaatgctttttatatattgatca 397  Q
    |||||||||||||| |||||||||||||||  |||||||  ||||||||||||      | ||||||||  |||||||||||||||||||||  ||||||    
T  4099904 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattcaattgttcttaatgctttttatatcctgatca 4099805  T
Q  398 catataa 404  Q
     ||||||    
T  4099804 aatataa 4099798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 17748187 - 17748281
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  17748187 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 17748281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 28787705 - 28787619
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| ||||||| |||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  28787705 attgaatcatgttgctgtgaaagtctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 28787619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 42062661 - 42062747
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||||| ||||  ||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  42062661 attgaaccaagttgcagtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 42062747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 7624842 - 7624943
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  7624842 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 7624941  T
Q  403 aa 404  Q
    ||    
T  7624942 aa 7624943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 12087698 - 12087799
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||| ||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  12087698 attgaaacatgttgctgtgaaactttattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 12087797  T
Q  403 aa 404  Q
    ||    
T  12087798 aa 12087799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 14016521 - 14016420
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  14016521 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 14016422  T
Q  403 aa 404  Q
    ||    
T  14016421 aa 14016420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 34133365 - 34133264
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||| ||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  34133365 attgaaacatgttgctgtgaaactttattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 34133266  T
Q  403 aa 404  Q
    ||    
T  34133265 aa 34133264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 34143596 - 34143495
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||| ||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  34143596 attgaaacatgttgctgtgaaactttattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 34143497  T
Q  403 aa 404  Q
    ||    
T  34143496 aa 34143495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 404
Target Start/End: Original strand, 32837691 - 32837859
Alignment:
Q  235 tgtttattt-tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctattt 333  Q
    ||||||||| ||| ||||||| ||||||||||||   |||||||| | |||||| ||||   |||| || |||||||||| ||| |||||||||||||||    
T  32837691 tgtttatttcttttatcatgtctagctaattttcagagattaagtctaagatgattctgtg-taacactaattgaaccattttgctgtgaaactctattt 32837789  T
Q  334 cctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
      | |||||  |||||||| ||||| ||||||||  |||||  ||||||||||||||  |||||| ||||||    
T  32837790 attatgaatgacaatctagtttttattcaattcaattgttc--aatgctttttatatcctgatcaaatataa 32837859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 11959545 - 11959466
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| ||| |||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  11959545 catgttgctgttaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 11959466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 31863439 - 31863541
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttctt-aatgctttttatatattgatcacata 401  Q
    |||||| ||||||| ||||||||| |||||  |||||||  |||||||| ||||| ||||||||  ||||||| ||||||||||||||  |||||| |||    
T  31863439 attgaaacatgttgctgtgaaactttatttattgtgaatgacaatctagtttttattcaattcaattgttcttaaatgctttttatatcctgatcaaata 31863538  T
Q  402 taa 404  Q
    |||    
T  31863539 taa 31863541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 404
Target Start/End: Original strand, 20055522 - 20055615
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| |||||||||||||||   ||||||  ||||| |||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  20055522 atgttgctgtgaaactctatttatcgtgaatgacaatcaagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 20055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 12058867 - 12058788
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| ||||||||||||||   |||||||  || ||||||||| | ||||||||  |||||||||||||||||||||    
T  12058867 catgttgctgtgaaactctattatttgtgaatgacattctagtttttattcaattcaattgttcttaatgctttttatat 12058788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 34066815 - 34066714
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataatctgaa 410  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||| |   |||||||||||||    
T  34066815 catgttgttgtgaaactctatttcttgtgaatatcaatctagttttattcaattcaattgttcttgatgctttttatatattaacaccatataatctgaa 34066716  T
Q  411 tc 412  Q
    ||    
T  34066715 tc 34066714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 404
Target Start/End: Original strand, 2793901 - 2794070
Alignment:
Q  235 tgtttattttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttc 334  Q
    |||||||| ||||||||||| ||||||| || ||||||||| || |||||||||||| |  |||| || |||||| ||||||| |||||||||||||||     
T  2793901 tgtttattctttgatcatgtctagctaaattcctttgattaggtctgagatgaatct-gtgtaaccctaattgaatcatgttgctgtgaaactctattta 2793999  T
Q  335 ctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     |||||||  |||| ||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  2794000 ttgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 2794070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 7635354 - 7635486
Alignment:
Q  271 gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctg 370  Q
    ||||| ||||||||||| ||||   |||| || ||| || ||||||| |||||||||||||||| | |||||||||||||||||||| ||||||||  ||    
T  7635354 gattaggtgtgagatgattctgatgtaaccctaatttaaacatgttgatgtgaaactctatttcttatgaatatcaatctagttttattcaattcaattg 7635453  T
Q  371 ttcttaatgctttttatatattgatcacatata 403  Q
    |||||| ||||||||||||  ||||||||||||    
T  7635454 ttcttagtgctttttatatgctgatcacatata 7635486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 27332145 - 27332052
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| | ||||||| |||||| |||||||||||||||||||||| ||||||||  |||| ||||||||||||||||| |||||||||||||    
T  27332145 catgttgctatgaaactttatttcttgtgaatatcaatctagttttattcaattcaattgttattaatgctttttatatactgatcacatataa 27332052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 187 - 404
Target Start/End: Complemental strand, 1950957 - 1950736
Alignment:
Q  187 gagcaaagccagcaacgacggaattcgatcagtttatttcctttgctatgttt----attttttgatcatgtttagctaattttctttgattaagtgtga 282  Q
    |||| ||||| |||||||||||| || ||  |||||||| |||| |||||||     ||| |||||| |||| |||||||||| ||||||||| || |||    
T  1950957 gagctaagccggcaacgacggaactctattggtttattttctttactatgttgtttaattctttgattatgtctagctaatttcctttgattaggtctga 1950858  T
Q  283 gatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgct 381  Q
    ||||| ||     |||| || |||||||||||||| |||||||||||||||  |||||||   ||||||| ||||| ||||||||  |||||||||||||    
T  1950857 gatgattccttt-taaccctaattgaaccatgttgatgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgct 1950759  T
Q  382 ttttatatattgatcacatataa 404  Q
    ||||||||  |||||| ||||||    
T  1950758 ttttatatcctgatcatatataa 1950736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 41058684 - 41058583
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  41058684 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 41058585  T
Q  403 aa 404  Q
    ||    
T  41058584 aa 41058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 906071 - 905970
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||| ||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  906071 attgaaccatgttattgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 905972  T
Q  403 aa 404  Q
    ||    
T  905971 aa 905970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 20398594 - 20398695
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  20398594 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 20398693  T
Q  403 aa 404  Q
    ||    
T  20398694 aa 20398695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 49853460 - 49853359
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  49853460 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 49853361  T
Q  403 aa 404  Q
    ||    
T  49853360 aa 49853359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 45941155 - 45941258
Alignment:
Q  302 ttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacat 400  Q
    |||||||||||||||| |||||||| ||||||  ||| |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||    
T  45941155 ttattgaaccatgttgctgtgaaaccctatttattgtaaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaat 45941254  T
Q  401 ataa 404  Q
    ||||    
T  45941255 ataa 45941258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 673455 - 673369
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  673455 attgatccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 673369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 404
Target Start/End: Original strand, 31204570 - 31204680
Alignment:
Q  295 ataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattg 393  Q
    ||||| || ||||| ||||||||||||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  ||    
T  31204570 ataaccctaattgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctg 31204669  T
Q  394 atcacatataa 404  Q
    |||| ||||||    
T  31204670 atcaaatataa 31204680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 3797208 - 3797107
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  3797208 attgaaacatgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 3797109  T
Q  403 aa 404  Q
    ||    
T  3797108 aa 3797107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 6071344 - 6071235
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||| ||||||||| |||    
T  6071344 taactctaattgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgccttttatatactga 6071245  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  6071244 tcaaatataa 6071235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 45961127 - 45961026
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  45961127 attgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 45961028  T
Q  403 aa 404  Q
    ||    
T  45961027 aa 45961026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 49498880 - 49498779
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||   ||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  49498880 attgaaacatgttgctgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 49498781  T
Q  403 aa 404  Q
    ||    
T  49498780 aa 49498779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 23022306 - 23022220
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||||||||||  |||||||   ||||||| ||||| ||||||||  |||||||||| ||||||||||    
T  23022306 attgaaccatgttgctgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatactttttatat 23022220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 21018848 - 21018748
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||| |||||| |||||||||||||||  |||||||  |||| ||| ||||| |||||||| |||||||||| ||||||| ||| ||||||| ||||    
T  21018848 attgaacaatgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaactgttcttaacgcttttt-tatcttgatcaaatat 21018750  T
Q  403 aa 404  Q
    ||    
T  21018749 aa 21018748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 21107673 - 21107572
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| ||| |||||||||||  |||||||  |||| ||| ||||| |||||| |  |||||||||||||||||||||  |||||| ||||    
T  21107673 attgaaccatgttgctgtcaaactctatttattgtgaatgacaatttagtttttattcaattaaattgttcttaatgctttttatattctgatcaaatat 21107574  T
Q  403 aa 404  Q
    ||    
T  21107573 aa 21107572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 28110798 - 28110898
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  ||||||||||| |||||||||  |||||| ||||    
T  28110798 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatg-tttttatatcctgatcaaatat 28110896  T
Q  403 aa 404  Q
    ||    
T  28110897 aa 28110898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 37184246 - 37184145
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  37184246 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 37184147  T
Q  403 aa 404  Q
    ||    
T  37184146 aa 37184145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 2405258 - 2405352
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||||| ||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||| ||||  |||||| ||||||    
T  2405258 catgttgttgtgaaactcaatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgattttcatatcctgatcaaatataa 2405352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 42022431 - 42022517
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  42022431 tgtgaaattctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 42022517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 29643611 - 29643502
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| |||||||||| ||| |||||||||||||||  | |||||  |||| ||| ||||| |||||| |  ||||||||||| |||||||||  |||    
T  29643611 taactctaattgaaccatattgctgtgaaactctatttattttgaatgacaatttagtttttattcaattaaattgttcttaatgttttttatatcctga 29643512  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  29643511 tcaaatataa 29643502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 37907626 - 37907565
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattca 366  Q
    ||||| ||||| ||||||||||| |||| | | |||||||||||||||||||| ||||||||    
T  37907626 ttgaaacatgtggttgtgaaactatattgcttatgaatatcaatctagttttattcaattca 37907565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 11668401 - 11668322
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| ||||||||||||| |  |||||||   ||||||||||| | ||||||||  |||||||||||||||||||||    
T  11668401 catgttgctgtgaaactctatctattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatat 11668322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 250 - 404
Target Start/End: Complemental strand, 18721717 - 18721563
Alignment:
Q  250 catgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatc 349  Q
    ||||| |||||||||| ||||||||| || |||||||| |||    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||    
T  18721717 catgtctagctaatttcctttgattaggtctgagatgattctatg-taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatc 18721619  T
Q  350 tag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||| ||||| ||||||||  |||||||||||||||||||||| |||||| ||||||    
T  18721618 tagtttttattcaattcaattgttcttaatgctttttatatactgatcaaatataa 18721563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 198 - 404
Target Start/End: Original strand, 14421371 - 14421582
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgctatgtttattt-----tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctg 292  Q
    ||||||||||||||| ||| |||||||| |||| |||||||| |||     ||| | |||||||||||||||| ||| ||||| || |||||||| ||||    
T  14421371 gcaacgacggaattctatcggtttattttctttactatgtttttttatgtatttaaccatgtttagctaatttacttggattaggtctgagatgattctg 14421470  T
Q  293 gaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatat 391  Q
       |||| || |||||| ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||      
T  14421471 tg-taaccctaattgaaacatgttgctgtgaaactctattaattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcc 14421569  T
Q  392 tgatcacatataa 404  Q
    |||||| ||||||    
T  14421570 tgatcaaatataa 14421582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 192 - 394
Target Start/End: Complemental strand, 45155768 - 45155561
Alignment:
Q  192 aagccagcaacgacggaattcgatcagtttatttcctttgctatgtt---tattt-tttgatcatgtttagctaattttctttgattaagtgtgagatga 287  Q
    ||||| |||||||||||| || ||  |||||||| |||| |||||||   ||||| ||| ||||||| |||||||||||    ||||| || ||||||||    
T  45155768 aagccggcaacgacggaactctatatgtttattttctttactatgttgtttatttctttaatcatgtctagctaatttttagagattaggtctgagatga 45155669  T
Q  288 atctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgcttttta 386  Q
     ||||   |||| || |||||| ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  ||||||||||||||||||    
T  45155668 ttctgatgtaaccctaattgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgcttttta 45155569  T
Q  387 tatattga 394  Q
    ||||||||    
T  45155568 tatattga 45155561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 404
Target Start/End: Original strand, 23613224 - 23613378
Alignment:
Q  250 catgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatc 349  Q
    ||||| |||||||||| ||||||||| || |||||||| | |    |||| || ||||||||||||||||||||||||||||||  |||||||  |||||    
T  23613224 catgtctagctaatttcctttgattaggtctgagatgattttatg-taaccctgattgaaccatgttgttgtgaaactctatttattgtgaatgacaatc 23613322  T
Q  350 tag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  23613323 tagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 23613378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 389
Target Start/End: Complemental strand, 25595095 - 25594954
Alignment:
Q  248 atcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaa 347  Q
    ||||||| |||||||||| | ||||||| || |||||| | ||||   |||| ||||||||||||||||| |||||||||||||||  |||||||  |||    
T  25595095 atcatgtctagctaatttccattgattaggtctgagattattctgtg-taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaa 25594997  T
Q  348 tctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||| ||||| ||||||||  |||||||||||||||||||||    
T  25594996 tctagtttttattcaattcaattgttcttaatgctttttatat 25594954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 17930718 - 17930819
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  17930718 attgatccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatat 17930817  T
Q  403 aa 404  Q
    ||    
T  17930818 aa 17930819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 38248781 - 38248690
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  38248781 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatattga 38248690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 16953513 - 16953614
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  16953513 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 16953612  T
Q  403 aa 404  Q
    ||    
T  16953613 aa 16953614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 25591869 - 25591760
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||    
T  25591869 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcacttgttcttaatgttttttatattatga 25591770  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  25591769 tcaaatataa 25591760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30784666 - 30784767
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  30784666 attgaaacatgttgatgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatat 30784765  T
Q  403 aa 404  Q
    ||    
T  30784766 aa 30784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 404
Target Start/End: Original strand, 10663577 - 10663737
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaata 343  Q
    ||||||||||| ||||||| || ||||||||| || |||||||||||| |  |||| || |||||  ||||||| |||||||||||||||  | |||||     
T  10663577 tttgatcatgtctagctaaattcctttgattaggtctgagatgaatct-gtgtaaccctaattgactcatgttgctgtgaaactctatttattctgaatg 10663675  T
Q  344 tcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     |||| ||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||||    
T  10663676 acaatttagtttttattcaattcaattgttcttaatgatttttatatcatgatcaaatataa 10663737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 12582737 - 12582846
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| ||||||| |||||| |||||||||||||||  |||||||  |||| ||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  12582737 taactctaattgaactatgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaattgttcttaatgctttttatatcctga 12582836  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  12582837 tcaaatataa 12582846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 5980695 - 5980594
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| ||||||| |||||||  ||||||| ||||||||| ||||| |||||| |  |||||||||||||||||||||  |||||| ||||    
T  5980695 attgatccatgttgctgtgaaaatctatttattgtgaatgtcaatctagtttttattcaattaaattgttcttaatgctttttatatcctgatcaaatat 5980596  T
Q  403 aa 404  Q
    ||    
T  5980595 aa 5980594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 8911384 - 8911485
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  8911384 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgtttttaatgctttttatatcctgatcaaatat 8911483  T
Q  403 aa 404  Q
    ||    
T  8911484 aa 8911485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 36711019 - 36710918
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  36711019 attgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 36710920  T
Q  403 aa 404  Q
    ||    
T  36710919 aa 36710918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 43682253 - 43682152
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||||||||||| | |||||  |||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  43682253 attgaaccatgttgttgtgaaattttatttattgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 43682154  T
Q  403 aa 404  Q
    ||    
T  43682153 aa 43682152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 21280151 - 21280065
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    ||||| |||||||| |||||||||||||||  ||| |||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  21280151 attgatccatgttgctgtgaaactctatttattgttaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 21280065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 388
Target Start/End: Complemental strand, 5614110 - 5614025
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttata 388  Q
    |||||| ||||||| |||||||||||||||  |||| ||  |||||||| ||||| ||||||||  ||||||||||||||||||||    
T  5614110 attgaaacatgttgatgtgaaactctatttattgtggatgacaatctagtttttattcaattcaattgttcttaatgctttttata 5614025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 18824777 - 18824676
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  18824777 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 18824678  T
Q  403 aa 404  Q
    ||    
T  18824677 aa 18824676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 31284414 - 31284495
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatat 391  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||||    
T  31284414 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatat 31284495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 33419393 - 33419494
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| |||||| |  ||||||||| ||| |||||||  |||||| ||||    
T  33419393 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaatttaattgttcttaaagctctttatatcatgatcaaatat 33419492  T
Q  403 aa 404  Q
    ||    
T  33419493 aa 33419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 10498589 - 10498495
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | |||| |||  |||||||||||||||||||||  |||||| ||||||    
T  10498589 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaagtcaattgttcttaatgctttttatatcctgatcaaatataa 10498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 404
Target Start/End: Complemental strand, 23619731 - 23619645
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  23619731 tgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 23619645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 18826270 - 18826169
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||  |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  18826270 attgatccatgttactgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 18826171  T
Q  403 aa 404  Q
    ||    
T  18826170 aa 18826169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 22174314 - 22174205
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||| ||||| |||||||| |||||||||||||||  | | |||  | |||||| ||||| ||||||||  | |||||||||||||||||||  |||    
T  22174314 taactctaattgatccatgttgctgtgaaactctatttattattaatgaccatctagtttttattcaattcaattattcttaatgctttttatatgctga 22174215  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  22174214 tcaaatataa 22174205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 5539106 - 5539055
Alignment:
Q  353 ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||| ||||||||  |||||||||||||||||||||| |||||| ||||||    
T  5539106 ttttattcaattcaattgttcttaatgctttttatatactgatcaaatataa 5539055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 23643556 - 23643642
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||| |||||||| ||||||||| |||||  | |||||  |||||||| ||||| ||||||||  ||||||||||||| |||||||    
T  23643556 attgatccatgttgctgtgaaactgtatttattctgaatgacaatctagtttttattcaattcaattgttcttaatgctgtttatat 23643642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 25230836 - 25230905
Alignment:
Q  323 aaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatat 391  Q
    |||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||| ||||||||||||    
T  25230836 aaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatactttttatatat 25230905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 13196600 - 13196680
Alignment:
Q  310 ccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||| ||||||||| |||||  ||||||   |||||||| ||||| ||||||||  |||||||||| ||||||||||    
T  13196600 ccatgttgctgtgaaactatatttattgtgaacgacaatctagtttttattcaattcaattgttcttaatactttttatat 13196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 401
Target Start/End: Original strand, 9685 - 9775
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacata 401  Q
    ||||||| |||||||||||||||| | ||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  9685 catgttgctgtgaaactctatttcttatgaatatcaatatagttttattcaattcaattgttcttaatgctttttatatattgatcacata 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 411
Target Start/End: Original strand, 28848523 - 28848691
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagt-gtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaat 342  Q
    ||||||||||| ||| |||||| |||||||||  | ||||||||| ||||   ||| | |  |||||| |||||||||||||||||| |||| | |||||    
T  28848523 tttgatcatgtctagttaatttcctttgattagatcgtgagatgattctgatgtaattttgtttgaacgatgttgttgtgaaactctgtttcatatgaat 28848622  T
Q  343 atcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataatctgaat 411  Q
    |||||| ||| |||| |||||||| |||||||||||| |||||||||| |||||| |||||| ||||||    
T  28848623 atcaatataggtttattcaattcaactgttcttaatgttttttatatactgatcatatataacctgaat 28848691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 28108171 - 28108080
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||||||||||||||||||||||||||| || |||||  |||||||| ||||| ||||||||  ||||||||||||||||||||||||||    
T  28108171 attgaaccatgttgttgtgaaactctatttactatgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatattga 28108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 9953697 - 9953806
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||    
T  9953697 taacccttattgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttgttaatgctttttatatcctga 9953796  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  9953797 tcaaatataa 9953806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 13021635 - 13021536
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatata 403  Q
    ||||||||||||||||||||| |||||||   |||||||||||||||||||||| ||||||||    ||||||||||||||||||| ||||||| |||||    
T  13021635 attgaaccatgttgttgtgaagctctattat-tgtgaatatcaatctagttttattcaattcaatatttcttaatgctttttatatcttgatcaaatata 13021537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 14281903 - 14281812
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||||||||||||||||||||||||||  | |||||| |||||||| ||||| ||||||||  |||||||| |||||||||||||||||    
T  14281903 attgaaccatgttgttgtgaaactctatttattttgaataacaatctagtttttattcaattcaattgttcttattgctttttatatattga 14281812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 404
Target Start/End: Complemental strand, 5738576 - 5738366
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgctatgtt---tatt-ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctgg 293  Q
    |||||||||||| || ||| |||||||| |||| |||||||   |||| |||| ||||||| |||||||||| ||||||||| || |||||||| |||      
T  5738576 gcaacgacggaactctatcggtttattttctttactatgttgtttattattttaatcatgtctagctaatttcctttgattaggtctgagatgattcttt 5738477  T
Q  294 aataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatatt 392  Q
      ||||  | ||||| | |||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |    
T  5738476 g-taaccttaattgatctatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatatcct 5738378  T
Q  393 gatcacatataa 404  Q
    ||||| ||||||    
T  5738377 gatcaaatataa 5738366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 10289714 - 10289815
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||| ||| |||||||||||||||||||||  |||||| ||||    
T  10289714 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaatacatttgttcttaatgctttttatatcctgatcaaatat 10289813  T
Q  403 aa 404  Q
    ||    
T  10289814 aa 10289815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 11126078 - 11125977
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||||||||||||| |||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  11126078 attgaaccatgttgttgtgaaactttatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 11125979  T
Q  403 aa 404  Q
    ||    
T  11125978 aa 11125977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 11188298 - 11188197
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  11188298 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatat 11188199  T
Q  403 aa 404  Q
    ||    
T  11188198 aa 11188197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 11401998 - 11402099
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  11401998 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 11402097  T
Q  403 aa 404  Q
    ||    
T  11402098 aa 11402099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 392
Target Start/End: Complemental strand, 28112147 - 28112058
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatatt 392  Q
    |||||||||||||||||||||||||||||| ||||||||  ||| |||| ||||| |||| |||  ||||||||||||||||||||||||    
T  28112147 attgaaccatgttgttgtgaaactctatttactgtgaatgacaaactagtttttattcaagtcaattgttcttaatgctttttatatatt 28112058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 23388478 - 23388378
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatata 403  Q
    ||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| |||||    
T  23388478 ttgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatata 23388379  T
Q  404 a 404  Q
    |    
T  23388378 a 23388378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 30655185 - 30655271
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||| |||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  30655185 attgaaccatattgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 30655271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 3597164 - 3597063
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  | |||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  3597164 attgaaccatgttgctgtgaaactctatttattttgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 3597065  T
Q  403 aa 404  Q
    ||    
T  3597064 aa 3597063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 404
Target Start/End: Complemental strand, 12988539 - 12988407
Alignment:
Q  271 gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctg 370  Q
    ||||| || |||||||| ||||   |||| || |||||||||||||| |||||| |||||||   |||||||||||||||||||||| ||||||||        
T  12988539 gattaggtctgagatgattctgatgtaaccctaattgaaccatgttgctgtgaagctctattat-tgtgaatatcaatctagttttattcaattcaatat 12988441  T
Q  371 ttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||||||  |||||| ||||||    
T  12988440 ttcttaatgctttttatatcctgatcaaatataa 12988407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 5259678 - 5259769
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||| ||||||||||||||||||||| |  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||| |||||||    
T  5259678 attgaaacatgttgttgtgaaactctatctattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttagatattga 5259769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 6512994 - 6513084
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||||||||||||||||  ||||||||  |||||||  |||||||||||| ||||||||||  |||||||||| |||||||||||||||    
T  6512994 attgaaccatgttgttgtgac-ctctatttattgtgaatgacaatctagtttttactcaattcaattgttcttaatactttttatatattga 6513084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 24399928 - 24400022
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  24399928 catgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 24400022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 2378971 - 2379072
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||| ||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  | |||||||||||||||||||  |||||| ||||    
T  2378971 attgaaccatattgatgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattattcttaatgctttttatatcctgatcaaatat 2379070  T
Q  403 aa 404  Q
    ||    
T  2379071 aa 2379072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 11192960 - 11192876
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||| ||||||||||||||||||   |||||||||||||||||||||| |||||| |  ||||||||||||||| |||||    
T  11192960 attgaatcatattgttgtgaaactctattat-tgtgaatatcaatctagttttattcaatttaattgttcttaatgctttctatat 11192876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 19475744 - 19475845
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||| ||||   |||||||  |||||||||||| | ||||||||| |||||||||||||||||||||  |||||| ||||    
T  19475744 attgaaacatgttgctgtgaaactttattatttgtgaatgacaatctagtttttattcaattcatttgttcttaatgctttttatatcctgatcaaatat 19475843  T
Q  403 aa 404  Q
    ||    
T  19475844 aa 19475845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 26942817 - 26942716
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||| | ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  26942817 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctcgtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatat 26942718  T
Q  403 aa 404  Q
    ||    
T  26942717 aa 26942716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 2846051 - 2846129
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||||||||| |  |||||||| |||||||| ||||| ||||||||  ||||||||||| |||||||||    
T  2846051 atgttgttgtgaaactctatatattgtgaataacaatctagtttttattcaattcaattgttcttaatgttttttatat 2846129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 18856400 - 18856306
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  18856400 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 18856306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 404
Target Start/End: Complemental strand, 22561555 - 22561445
Alignment:
Q  295 ataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattg 393  Q
    ||||| || |||||| ||||||| |||||||||||||||  ||||||   |||||||| ||||| | ||||||  |||||||||||||||||||||  ||    
T  22561555 ataaccctaattgaatcatgttgctgtgaaactctatttattgtgaaggacaatctagtttttatttaattcaattgttcttaatgctttttatatcctg 22561456  T
Q  394 atcacatataa 404  Q
    |||| ||||||    
T  22561455 atcaaatataa 22561445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 28665646 - 28665560
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||  |||||||||    
T  28665646 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatattttttatat 28665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 404
Target Start/End: Complemental strand, 1126110 - 1126017
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  1126110 atgttgctgtgaaactctattcattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatataa 1126017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 4512214 - 4512315
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||| ||| ||||| ||||||||  |||||||||| |||||||| |  |||||| ||||    
T  4512214 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaattgttcttaatactttttatctcgtgatcaaatat 4512313  T
Q  403 aa 404  Q
    ||    
T  4512314 aa 4512315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 20185486 - 20185587
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||| ||  ||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  20185486 attgaaccatgctgcagtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgatttttatatcctgatcaaatat 20185585  T
Q  403 aa 404  Q
    ||    
T  20185586 aa 20185587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 22150505 - 22150404
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||| ||  ||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  22150505 attgaaccatgctgcagtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgatttttatatcctgatcaaatat 22150406  T
Q  403 aa 404  Q
    ||    
T  22150405 aa 22150404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 24371052 - 24371116
Alignment:
Q  340 aatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  24371052 aatatcattctagttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 24371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 13004930 - 13005021
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||||||||||||||||||||||||||||  ||| |||  |||||||| ||||| | |||| |  ||||||| || |||||||||||||||    
T  13004930 attgaaccatgttgttgtgaaactctatttattgtaaatgacaatctagtttttattgaatttaattgttcttgatcctttttatatattga 13005021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 24410048 - 24410127
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| |||||||||||||||   ||||||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  24410048 catgttgctgtgaaactctatttatggtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 24410127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 9839777 - 9839691
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| |||||||||||||||  | |||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||    
T  9839777 attgaaacatgttgctgtgaaactctatttattatgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatat 9839691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 26898251 - 26898165
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| ||||||||| |||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||| ||||||    
T  26898251 attgaaacatgttgctgtgaaactatatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgcttgttatat 26898165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 28230343 - 28230437
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  | |||||||||||||||||||  |||||| ||||||    
T  28230343 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattattcttaatgctttttatatcctgatcaaatataa 28230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 31072046 - 31072147
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| || ||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  31072046 attgatccatgttgctgcgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 31072145  T
Q  403 aa 404  Q
    ||    
T  31072146 aa 31072147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 13946792 - 13946861
Alignment:
Q  336 tgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  13946792 tgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 13946861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 280 - 404
Target Start/End: Complemental strand, 35521771 - 35521647
Alignment:
Q  280 tgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatg 379  Q
    |||||||||||||   ||||| |  |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||  |||||||||||    
T  35521771 tgagatgaatctgatgtaactttgtttgaaccatgttgttgtgaaactctatttcatgtgggtatcaatctagttttactcaattcaattgttcttaatg 35521672  T
Q  380 ctttttatatattgatcacatataa 404  Q
      ||||||||| |||| | ||||||    
T  35521671 tattttatatactgataatatataa 35521647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 406
Target Start/End: Complemental strand, 31586332 - 31586221
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||    
T  31586332 taacccttattgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagttttgattcaattcaattgttcttaatgctttttatatcctga 31586233  T
Q  395 tcacatataatc 406  Q
    ||| ||||||||    
T  31586232 tcaaatataatc 31586221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 5105440 - 5105549
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  5105440 taacccttattgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 5105539  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  5105540 tcaaatataa 5105549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 26365599 - 26365756
Alignment:
Q  248 atcatgtttagctaattttcttt-gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatca 346  Q
    ||||||| ||||||||||||||| |||||||| |||||||| |||    |||| || ||| |||||||||| |||||||||||||||  |||||||  ||    
T  26365599 atcatgtctagctaattttcttttgattaagtctgagatgattctttc-taaccctaattaaaccatgttgctgtgaaactctatttattgtgaatgaca 26365697  T
Q  347 atctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  26365698 atctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 26365756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 404
Target Start/End: Original strand, 29440177 - 29440346
Alignment:
Q  235 tgtttattttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttc 334  Q
    |||||||| ||||||||||| ||||||| || ||||||||| || |||||||||||| |  |||| || |||||  ||||||| |||||||||||||||     
T  29440177 tgtttattctttgatcatgtctagctaaattcctttgattaggtctgagatgaatct-gtgtaaccctaattgactcatgttgctgtgaaactctattta 29440275  T
Q  335 ctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     |||||||  |||| ||| ||||| |||||| |  |||||||||||||||||||||  |||||| ||||||    
T  29440276 ttgtgaatgacaatttagtttttattcaatttaattgttcttaatgctttttatatcctgatcaaatataa 29440346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 43723423 - 43723509
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  43723423 attgaaccatgttgttgtgaaactctatttattgtgaataacaatctagtttttattcaattcaattgttcttaatgctttttatat 43723509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 9185816 - 9185707
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  9185816 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 9185717  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  9185716 tcaaatataa 9185707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 42369094 - 42368993
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  42369094 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 42368995  T
Q  403 aa 404  Q
    ||    
T  42368994 aa 42368993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 6826494 - 6826595
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  6826494 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 6826593  T
Q  403 aa 404  Q
    ||    
T  6826594 aa 6826595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 9189044 - 9188935
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| |||||||||||||| ||||||||||||||||||  | |||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  9189044 taacccttattgaaccatgatgttgtgaaactctatttattatgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 9188945  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  9188944 tcaaatataa 9188935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 25960072 - 25959971
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  25960072 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 25959973  T
Q  403 aa 404  Q
    ||    
T  25959972 aa 25959971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 43208281 - 43208172
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||| ||||||||||  |||    
T  43208281 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatactttttatatcctga 43208182  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  43208181 tcaaatataa 43208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 10600659 - 10600769
Alignment:
Q  296 taactcttattgaacca-tgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattg 393  Q
    |||| |||||||||||| ||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  ||    
T  10600659 taacccttattgaaccaatgttgctgtgaaactctatttattgtgaatgacaatctagattttattcaattcaattgttcttaatgctttttatattctg 10600758  T
Q  394 atcacatataa 404  Q
    |||| ||||||    
T  10600759 atcaaatataa 10600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 11348279 - 11348178
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| ||||||||| |||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  11348279 attgaaccatgttgctgtgaaactttatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 11348180  T
Q  403 aa 404  Q
    ||    
T  11348179 aa 11348178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 12219517 - 12219618
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  12219517 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 12219616  T
Q  403 aa 404  Q
    ||    
T  12219617 aa 12219618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 16178849 - 16178950
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||||||  |||||| ||||    
T  16178849 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatgctttttatatcctgatcaaatat 16178948  T
Q  403 aa 404  Q
    ||    
T  16178949 aa 16178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 22630563 - 22630664
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||   ||||||||||| | |||||||| ||||||||||||||||||||||  |||||| ||||    
T  22630563 attgaaacatgttgctgtgaaactctatttattgtgaatgataatctagtttttattcaattcaactgttcttaatgctttttatatcctgatcaaatat 22630662  T
Q  403 aa 404  Q
    ||    
T  22630663 aa 22630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24234817 - 24234918
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||||||  |||||| ||||    
T  24234817 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatgctttttatatcctgatcaaatat 24234916  T
Q  403 aa 404  Q
    ||    
T  24234917 aa 24234918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24238089 - 24238190
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||||||  |||||| ||||    
T  24238089 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatgctttttatatcctgatcaaatat 24238188  T
Q  403 aa 404  Q
    ||    
T  24238189 aa 24238190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 25821229 - 25821128
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||||||||||||||||||||  |||||||   ||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  25821229 attgaaacatgttgttgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 25821130  T
Q  403 aa 404  Q
    ||    
T  25821129 aa 25821128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 25870506 - 25870607
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||||||  |||||| ||||    
T  25870506 attgaaccatgttgctgtgaaactctatttattgtgaattacaatctagtttttatttaattcaattgttcttaatgctttttatattctgatcaaatat 25870605  T
Q  403 aa 404  Q
    ||    
T  25870606 aa 25870607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 25873897 - 25873998
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  25873897 attgaaccatgttggtgtgaaactctatttattgtgaattacaatctagtttttattcaattcaattgttcttaatgttttttatattctgatcaaatat 25873996  T
Q  403 aa 404  Q
    ||    
T  25873997 aa 25873998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30926269 - 30926370
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||||||||||||||||| |  ||||||| ||||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  30926269 attgaaacatgttgttgtgaaactctatctattgtgaatgtcaatctagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatat 30926368  T
Q  403 aa 404  Q
    ||    
T  30926369 aa 30926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 404
Target Start/End: Complemental strand, 36808884 - 36808724
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaata 343  Q
    ||||| ||||| ||| ||||||||||||||||  | |||||||| | ||   |||| || |||||||||||||| |||||||||||||||  |||||||     
T  36808884 tttgaccatgtctagttaattttctttgattagatttgagatgattttgtg-taaccctaattgaaccatgttgctgtgaaactctatttattgtgaatg 36808786  T
Q  344 tcaatct-agttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     |||||| | ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||||    
T  36808785 acaatctaatttttattcaattcaattgttcttaatgttttttatatcctgatcaaatataa 36808724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 37280060 - 37279959
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||  ||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  37280060 attgaaccatgttgccgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 37279961  T
Q  403 aa 404  Q
    ||    
T  37279960 aa 37279959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 40781194 - 40781295
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| | |||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  40781194 attgaaccatgttgctctgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 40781293  T
Q  403 aa 404  Q
    ||    
T  40781294 aa 40781295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 389
Target Start/End: Complemental strand, 25139423 - 25139229
Alignment:
Q  199 caacgacggaattcgatcagtttatttcctttgctatgtt---tattttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaa 295  Q
    |||||||||||||| ||| |||||||| |||| | |||||   |||| ||| |  || | |||||||||| ||||||||| || || ||||| |||||      
T  25139423 caacgacggaattctatcggtttattttctttacgatgttatttattattttaatatatctagctaatttcctttgattaggtctgtgatgattctggtg 25139324  T
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    | || || |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| |||||| |  ||||| |||||||||||||||    
T  25139323 tgaccctaattgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaatttaattgttcctaatgctttttatat 25139229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 8888357 - 8888459
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttctt-aatgctttttatatattgatcacata 401  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||| ||||||||||||||  |||||| |||    
T  8888357 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaaatgctttttatatcctgatcaaata 8888456  T
Q  402 taa 404  Q
    |||    
T  8888457 taa 8888459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 16791135 - 16791041
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  16791135 catgttgttgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 16791041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 40259515 - 40259421
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  40259515 catgttgttgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 40259421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 13972277 - 13972176
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtt-ttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  ||||| |  |||| ||||| ||| |||||||| |||||||||||| |||||||||  |||||| ||||    
T  13972277 attgaaccatgttgctgtgaaactctatttattgtgattgacaatatagttattattcaattcaactgttcttaatgttttttatatcatgatcaaatat 13972178  T
Q  403 aa 404  Q
    ||    
T  13972177 aa 13972176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 17876394 - 17876293
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||   ||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  17876394 attgaaacatgttgctgtgaaactctatttatcgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 17876295  T
Q  403 aa 404  Q
    ||    
T  17876294 aa 17876293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Original strand, 22020790 - 22020880
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||||||||||| ||||||||||||||   |||||||  |||||||||||| | |||| |||  ||||||||||||||||||||||||||    
T  22020790 attgaaccatgttgctgtgaaactctattat-tgtgaatgacaatctagtttttattcaactcaattgttcttaatgctttttatatattga 22020880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 1386798 - 1386704
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  1386798 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcatgatcaaatataa 1386704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 17876828 - 17876914
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||||||||||  | |||||  |||||||| ||||| ||||||||  |||||||||| ||||||||||    
T  17876828 attgaaccatgttgctgtgaaactctatttattatgaatgacaatctagtttttattcaattcaattgttcttaattctttttatat 17876914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 37937595 - 37937501
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||||||  |||||| ||||||    
T  37937595 catgttgctgtgaaactctatttattgtgaatgacaatctagtttttattgaattcaattgttcttaatgctttttatatcctgatcaaatataa 37937501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 27266510 - 27266611
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| |||||| |  ||||||||||| |||||||||  |||||| ||||    
T  27266510 attgatccatgttgatgtgaaactctatttattgtgaatgacaatctagtttttattcaattaaattgttcttaatgttttttatatcctgatcaaatat 27266609  T
Q  403 aa 404  Q
    ||    
T  27266610 aa 27266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 33310388 - 33310489
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  33310388 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 33310487  T
Q  403 aa 404  Q
    ||    
T  33310488 aa 33310489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 38015240 - 38015341
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  38015240 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcatgatcaaatat 38015339  T
Q  403 aa 404  Q
    ||    
T  38015340 aa 38015341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 45453596 - 45453697
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  45453596 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 45453695  T
Q  403 aa 404  Q
    ||    
T  45453696 aa 45453697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 5666255 - 5666341
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||  |||||||  |||||||||||| | ||||||||  ||||||||||| |||||||||  |||||| ||||||    
T  5666255 tgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatataa 5666341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 45456883 - 45456969
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||||||| |||||  |||||||  |||||||||||||||||||||    
T  45456883 attgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttatccaattcaattgttcttaatgctttttatat 45456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 404
Target Start/End: Original strand, 3875020 - 3875109
Alignment:
Q  316 tgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||| | |||  |||||||   ||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||||    
T  3875020 tgttgtgaaactgtgtttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatataa 3875109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 31427925 - 31427824
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | | ||||||  |||||||||||||||||||||  |||||| ||||    
T  31427925 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttatttaattcaattgttcttaatgctttttatatcctgatcaaatat 31427826  T
Q  403 aa 404  Q
    ||    
T  31427825 aa 31427824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 30275120 - 30275051
Alignment:
Q  336 tgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  30275120 tgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatataa 30275051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 6298203 - 6298287
Alignment:
Q  317 gttgtgaaactctatttcctgtgaatatcaatctagttttactcaattca-tctgttcttaatgctttttatatattgatcacat 400  Q
    |||||||||||||||||  | ||||| ||||| || |||||  ||||||| | ||| | ||||||||||||||| ||||||||||    
T  6298203 gttgtgaaactctattttatatgaatgtcaatataattttatccaattcaatttgtgcctaatgctttttatatcttgatcacat 6298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 404
Target Start/End: Original strand, 62187 - 62358
Alignment:
Q  235 tgtttatt-ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctattt 333  Q
    |||||||| |||| ||||||| |||||||||| ||||||||| || |||||||| |||     ||| || |||||||||||||| |||||||||||||||    
T  62187 tgtttattattttaatcatgtctagctaatttcctttgattaggtctgagatgattctttgtaaaccctaattgaaccatgttgctgtgaaactctattt 62286  T
Q  334 cctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
      |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  62287 attgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 62358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 63608 - 63686
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgct 381  Q
    |||||| ||||||| |||||||||||||||  |||||||  || ||||| ||||| ||||||||  |||||||||||||    
T  63608 attgaaacatgttgctgtgaaactctatttattgtgaatgacattctagtttttattcaattcaattgttcttaatgct 63686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 48769 - 48661
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataatctgaatcagtgag 418  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||   |||||| ||| |||| || ||    
T  48769 tgtgcaactctatttcatgtgaatatcaatctagttttattcaattcaattgttcttaatgctttttatatattgacaccatatagtctaaatcggtaag 48670  T
Q  419 attgtatga 427  Q
    |||| ||||    
T  48669 attgaatga 48661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 244 - 404
Target Start/End: Original strand, 9392502 - 9392660
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaata 343  Q
    ||||||||||| |||||| |||  |||||||| || |||||||| ||||   |||| || |||||| ||| |||||||||||||||||||  |||||||     
T  9392502 tttgatcatgtctagctagtttcttttgattaggtctgagatgattctg---taaccctaattgaagcatattgttgtgaaactctatttattgtgaatg 9392598  T
Q  344 tcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  9392599 acaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatataa 9392660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 11636626 - 11636743
Alignment:
Q  271 gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctg 370  Q
    ||||| || |||||||| ||||   |||| || |||||||||||||| ||||||||||||||   |||||||||||||||||||||| ||||||||  ||    
T  11636626 gattaggtctgagatgattctgatgtaaccctaattgaaccatgttgctgtgaaactctattat-tgtgaatatcaatctagttttattcaattcaattg 11636724  T
Q  371 ttcttaatgctttttatat 389  Q
    |||||||||||||||||||    
T  11636725 ttcttaatgctttttatat 11636743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 2873389 - 2873490
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  2873389 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 2873488  T
Q  403 aa 404  Q
    ||    
T  2873489 aa 2873490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Original strand, 3840333 - 3840442
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  3840333 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 3840432  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  3840433 tcaaatataa 3840442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 30690561 - 30690662
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| ||||||||||||||| ||||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  30690561 attgaaccatgttgctgtgaaactctatttactgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 30690660  T
Q  403 aa 404  Q
    ||    
T  30690661 aa 30690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 49743297 - 49743188
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||    
T  49743297 taacccttattgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctga 49743198  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  49743197 tcaaatataa 49743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 27298830 - 27298740
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgct-ttttatatattga 394  Q
    ||||| ||||| | |||||||||||||| | |||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  27298830 ttgaaacatgtggctgtgaaactctattgcttgtgaatatcaatctagttttattcaattcaattgttcttaatgcttttttatatattga 27298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 389
Target Start/End: Complemental strand, 55035284 - 55035143
Alignment:
Q  248 atcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaa 347  Q
    ||||||| ||||||||| |||| ||||| || |||||||||| ||   |||  || |||||| |||||||||||||||||||||||  |||||||  |||    
T  55035284 atcatgtctagctaattctctt-gattaggtctgagatgaatttgatgtaatcctaattgaaacatgttgttgtgaaactctatttgttgtgaatgacaa 55035186  T
Q  348 tctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||| ||||| ||||||||  |||||||||||||||||||||    
T  55035185 tctagtttttattcaattcaattgttcttaatgctttttatat 55035143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 2775306 - 2775407
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  2775306 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 2775405  T
Q  403 aa 404  Q
    ||    
T  2775406 aa 2775407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 2778549 - 2778650
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  2778549 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 2778648  T
Q  403 aa 404  Q
    ||    
T  2778649 aa 2778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 7486395 - 7486496
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  7486395 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 7486494  T
Q  403 aa 404  Q
    ||    
T  7486495 aa 7486496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 22360278 - 22360371
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||| ||||| |||||||||||||||| || || ||||||||  ||||||||||| |||||||||| |||||| ||||||    
T  22360278 catgttgatgtgaaactcaatttcttgtgaatatcaatctatttatattcaattcaattgttcttaatgttttttatatactgatcatatataa 22360371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 22370181 - 22370274
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||||| |||||  ||||||||||||||| || || ||||||||  ||||||||||| ||||| |||| |||||||||||||    
T  22370181 catgttgttgtgaaactcaatttctcgtgaatatcaatctatttatattcaattcaattgttcttaatgttttttgtataatgatcacatataa 22370274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24125324 - 24125425
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  24125324 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 24125423  T
Q  403 aa 404  Q
    ||    
T  24125424 aa 24125425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24128601 - 24128702
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  24128601 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 24128700  T
Q  403 aa 404  Q
    ||    
T  24128701 aa 24128702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 25584512 - 25584613
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  25584512 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatat 25584611  T
Q  403 aa 404  Q
    ||    
T  25584612 aa 25584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 27308373 - 27308300
Alignment:
Q  321 tgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    ||||| |||||| | |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  27308373 tgaaaatctattgcttgtgaatatcaatctagttttattcaattcaattgttcttaatgctttttatatattga 27308300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 34984222 - 34984121
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  34984222 attgaaacatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 34984123  T
Q  403 aa 404  Q
    ||    
T  34984122 aa 34984121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 52199738 - 52199839
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  52199738 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 52199837  T
Q  403 aa 404  Q
    ||    
T  52199838 aa 52199839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 54719796 - 54719897
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  54719796 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatat 54719895  T
Q  403 aa 404  Q
    ||    
T  54719896 aa 54719897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 54723566 - 54723667
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  54723566 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 54723665  T
Q  403 aa 404  Q
    ||    
T  54723666 aa 54723667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 17544441 - 17544541
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatata 403  Q
    |||||| |||||||||||||||||||||||  |||||||  ||||||||||||| ||||||||  || |||||||| |||||||||  |||||| |||||    
T  17544441 attgaaacatgttgttgtgaaactctatttattgtgaatgacaatctagttttattcaattcaattgatcttaatgttttttatatcctgatcaaatata 17544540  T
Q  404 a 404  Q
    |    
T  17544541 a 17544541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 32287693 - 32287602
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| ||||||||||||||    
T  32287693 attgaaccatgttgatgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgttttttatatattga 32287602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 16243698 - 16243784
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||||||||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||    
T  16243698 attgaaccatgttgttgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgatttttatat 16243784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 404
Target Start/End: Original strand, 18542376 - 18542477
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgt--gaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||||| ||||  |||||||||||||||| | |  |||||||||| |||||||| ||||||||  ||||||||||| |||||||||| |||||||||||    
T  18542376 ttgaaccttgttaatgtgaaactctatttcatatatgaatatcaatatagttttattcaattcaattgttcttaatgatttttatatactgatcacatat 18542475  T
Q  403 aa 404  Q
    ||    
T  18542476 aa 18542477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 404
Target Start/End: Complemental strand, 6435202 - 6435046
Alignment:
Q  248 atcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaa 347  Q
    ||||||| ||||||| ||  |||||||| || |||||||||||||   |||| || ||| |  ||||||| |||||||||||||||  |||||||  |||    
T  6435202 atcatgtctagctaaattcttttgattaggtctgagatgaatctgtg-taaccctaattaattcatgttgctgtgaaactctatttattgtgaatgacaa 6435104  T
Q  348 tctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    | ||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||||    
T  6435103 tttagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatataa 6435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 11190351 - 11190452
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  11190351 attgaatcatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 11190450  T
Q  403 aa 404  Q
    ||    
T  11190451 aa 11190452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 22994060 - 22993967
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||| ||||||||  | ||||||||| |||||||||| | |||| ||||||    
T  22994060 catgttgctgtaaaactctatttattgtgaatatcaatctagttttattcaattcaatttttcttaatgttttttatatacttatcagatataa 22993967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 404
Target Start/End: Original strand, 28265650 - 28265806
Alignment:
Q  248 atcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaa 347  Q
    ||||||| ||||||| ||  |||||||| || |||||||||||||   |||| || |||||  ||||||| |||||||||||||||  |||||||  |||    
T  28265650 atcatgtctagctaaattcttttgattaggtctgagatgaatctgtg-taaccctaattgattcatgttgctgtgaaactctatttattgtgaatgacaa 28265748  T
Q  348 tctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    | ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  28265749 tttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 28265806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 29344252 - 29344143
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattga 394  Q
    |||| ||||||||||||||||| ||| |||||||||||  |||||||  ||||| || ||||| ||||||||  |||||||||||||||||||||  |||    
T  29344252 taacccttattgaaccatgttgctgtcaaactctatttattgtgaatgacaatccagtttttattcaattcaattgttcttaatgctttttatatcctga 29344153  T
Q  395 tcacatataa 404  Q
    ||| ||||||    
T  29344152 tcaaatataa 29344143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 41976840 - 41976941
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  || ||||||||||||||||||  |||||| ||||    
T  41976840 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgctcttaatgctttttatatcctgatcaaatat 41976939  T
Q  403 aa 404  Q
    ||    
T  41976940 aa 41976941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 43809404 - 43809505
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||| |||||||||||||  |||||| ||||    
T  43809404 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttgatgctttttatatcctgatcaaatat 43809503  T
Q  403 aa 404  Q
    ||    
T  43809504 aa 43809505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 43926660 - 43926761
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  ||| |||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  43926660 attgaaccatgttgctgtgaaactctatttattgtaaatgacaatctagtttttattcaattcagttgttcttaatgctttttatatcctgatcaaatat 43926759  T
Q  403 aa 404  Q
    ||    
T  43926760 aa 43926761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 45896205 - 45896306
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||| ||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  45896205 attgaaccatattgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 45896304  T
Q  403 aa 404  Q
    ||    
T  45896305 aa 45896306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 46884777 - 46884865
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatat 391  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||||    
T  46884777 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatat 46884865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 244 - 384
Target Start/End: Original strand, 10884624 - 10884764
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaat-ctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaat 342  Q
    |||||| |||||||| |||||| ||||||||| || |||||||| | || |  |||| || |||||||||||||| |||||||||||||||  |||||||    
T  10884624 tttgattatgtttagttaatttcctttgattaggtctgagatgatttcttg--taaccctaattgaaccatgttgctgtgaaactctatttattgtgaat 10884721  T
Q  343 atcaatctag-ttttactcaattcatctgttcttaatgctttt 384  Q
       ||||||| ||||| ||||||||  ||||||||||||||||    
T  10884722 gataatctagtttttattcaattcaattgttcttaatgctttt 10884764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 404
Target Start/End: Complemental strand, 17529123 - 17529025
Alignment:
Q  307 gaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||| || |||||||||||||||  ||||||| ||||| ||| ||||| ||||||||  |||||||||| |||||||||| ||||||| ||||||    
T  17529123 gaaccatgctgctgtgaaactctatttattgtgaatgtcaatttagtttttattcaattcaattgttcttaatactttttatattttgatcaaatataa 17529025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 20729016 - 20728930
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||||| |||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  20729016 attgaaccacgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 20728930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 404
Target Start/End: Original strand, 35412288 - 35412441
Alignment:
Q  251 atgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatct 350  Q
    |||| |||||||||| ||||||||| || |||||||| |||    ||||  | ||||| | |||||| |||||||||||||||  |||||||  ||||||    
T  35412288 atgtctagctaatttcctttgattaggtctgagatgattctttg-taaccttaattgatctatgttgctgtgaaactctatttattgtgaatgacaatct 35412386  T
Q  351 agtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  35412387 agtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 35412441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 52309927 - 52309845
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgcttttt 385  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||    
T  52309927 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgcttttt 52309845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 404
Target Start/End: Original strand, 53815593 - 53815754
Alignment:
Q  243 ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaat 342  Q
    |||| ||||||| || |||| || ||||||||| || |||||||||||||   |||| || |||||  ||||||| ||| |||||||||||  |||||||    
T  53815593 tttttatcatgtctaactaaattcctttgattaggtctgagatgaatctgtg-taaccctaattgattcatgttgctgtaaaactctatttattgtgaat 53815691  T
Q  343 atcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
      |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  53815692 gacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 53815754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 8461856 - 8461755
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||| ||| ||||| ||||||||  ||| |||||||||||||||||  |||||| ||||    
T  8461856 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatttagtttttattcaattcaattgtgcttaatgctttttatatcctgatcaaatat 8461757  T
Q  403 aa 404  Q
    ||    
T  8461756 aa 8461755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 10106968 - 10106867
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| | |||||||||||||  |||||||   ||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  10106968 attgaaccatgttgctatgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 10106869  T
Q  403 aa 404  Q
    ||    
T  10106868 aa 10106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 11784590 - 11784691
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||||||||    
T  11784590 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcacatat 11784689  T
Q  403 aa 404  Q
    ||    
T  11784690 aa 11784691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 17141233 - 17141334
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||| ||||||||||||||||  |||||||   ||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  17141233 attgaaacatgttattgtgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 17141332  T
Q  403 aa 404  Q
    ||    
T  17141333 aa 17141334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 22417203 - 22417102
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  22417203 attgaaacatgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 22417104  T
Q  403 aa 404  Q
    ||    
T  22417103 aa 22417102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 28008439 - 28008338
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| |||||| |  |||||||||||||||||||||  |||||| ||||    
T  28008439 attgatccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattaaattgttcttaatgctttttatatcctgatcaaatat 28008340  T
Q  403 aa 404  Q
    ||    
T  28008339 aa 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 50461918 - 50461817
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  50461918 attgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 50461819  T
Q  403 aa 404  Q
    ||    
T  50461818 aa 50461817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 404
Target Start/End: Original strand, 31857650 - 31857742
Alignment:
Q  313 tgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||| |||||||||||||||  |||||||  |||| ||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||||    
T  31857650 tgttgctgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatataa 31857742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 397
Target Start/End: Original strand, 38386815 - 38386905
Alignment:
Q  308 aaccatgttgttgtgaaactctatttc--ctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatca 397  Q
    |||||||||||||||||||||||||||   | |||||||||||  ||||||| ||||||||  |||| ||||||||||||||||| ||||||    
T  38386815 aaccatgttgttgtgaaactctatttcatatatgaatatcaattcagttttattcaattcaattgtt-ttaatgctttttatatactgatca 38386905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 404
Target Start/End: Original strand, 27091717 - 27091820
Alignment:
Q  302 ttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacat 400  Q
    |||||||  ||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  |||| ||||||||||||||||  |||||| ||    
T  27091717 ttattgattcatgttgctgtgaaactctatttattgtgaatgacaatctagttttaattcaattcaattgttgttaatgctttttatattctgatcaaat 27091816  T
Q  401 ataa 404  Q
    ||||    
T  27091817 ataa 27091820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 404
Target Start/End: Original strand, 538666 - 538752
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  538666 tgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 538752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 15195671 - 15195585
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| | |||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||| ||||||||||||    
T  15195671 attgaaccatgttgctatgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttattgctttttatat 15195585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 52988237 - 52988331
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  52988237 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 52988331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 19301874 - 19301773
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||| ||  |||||| ||||    
T  19301874 attgatccatgttgatgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatgctttttaaatcctgatcaaatat 19301775  T
Q  403 aa 404  Q
    ||    
T  19301774 aa 19301773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 19305058 - 19304957
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  |||||||  |||||||| ||||| | ||||||  |||||||||||||||||| ||  |||||| ||||    
T  19305058 attgatccatgttgatgtgaaactctatttattgtgaatgacaatctagtttttatttaattcaattgttcttaatgctttttaaatcctgatcaaatat 19304959  T
Q  403 aa 404  Q
    ||    
T  19304958 aa 19304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 22783417 - 22783502
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttata 388  Q
    |||||| ||||||| |||||||||||||||  |||| ||  |||||||| ||||| ||||||||  ||||||||||||||||||||    
T  22783417 attgaaacatgttgatgtgaaactctatttattgtggatgacaatctagtttttattcaattcaattgttcttaatgctttttata 22783502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 22787781 - 22787866
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttata 388  Q
    |||||| ||||||| |||||||||||||||  |||| ||  |||||||| ||||| ||||||||  ||||||||||||||||||||    
T  22787781 attgaaacatgttgatgtgaaactctatttattgtggatgacaatctagtttttattcaattcaattgttcttaatgctttttata 22787866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 32367498 - 32367397
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| ||||||||||||||   |||||||   ||||||| ||||| ||||||||  ||||||||||||||||| |||  |||||| ||||    
T  32367498 attgaaccatgttgctgtgaaactctattatttgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttgtatcctgatcaaatat 32367399  T
Q  403 aa 404  Q
    ||    
T  32367398 aa 32367397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 3293330 - 3293244
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| ||||||||||||| |  |||||||  |||||||| ||||| |||| |||  |||||||||||||||||||||    
T  3293330 attgaaacatgttgatgtgaaactctatctattgtgaatgacaatctagtttttattcaactcaaatgttcttaatgctttttatat 3293244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 12561596 - 12561502
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | | ||||||  |||||||||||||||||||||  |||||| ||||||    
T  12561596 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattgaattcaattgttcttaatgctttttatatcctgatcaaatataa 12561502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 404
Target Start/End: Complemental strand, 25443214 - 25443128
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  25443214 tgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 25443128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 30220378 - 30220292
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| ||||||||| |||||  |||||||  |||||||| ||||| ||||||||  ||||||||||||| |||||||    
T  30220378 attgaaacatgttgctgtgaaactatatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctctttatat 30220292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 16185057 - 16184956
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatct-agttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||| | ||||| ||||||||  |||| |||||| |||||||||  |||||| ||||    
T  16185057 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctaatttttattcaattcaattgttgttaatgttttttatatcctgatcaaatat 16184958  T
Q  403 aa 404  Q
    ||    
T  16184957 aa 16184956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 35751279 - 35751380
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||  || ||||||||||||  | | |||  |||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  35751279 attgatccatgttcctgcgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatat 35751378  T
Q  403 aa 404  Q
    ||    
T  35751379 aa 35751380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 404
Target Start/End: Complemental strand, 48064396 - 48064303
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||| ||||||||||||||   |||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  48064396 atgttgctgtgaaactctattatttgtgaatgacaatatagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 48064303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 27308934 - 27308887
Alignment:
Q  317 gttgtgaaactctatttcctgtgaatatcaatctagttttactcaatt 364  Q
    |||||||||||||||| | |||||||||||||||| ||||| ||||||    
T  27308934 gttgtgaaactctattgcttgtgaatatcaatctatttttattcaatt 27308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 10881312 - 10881406
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||| || |||||||||  |||||| ||||||    
T  10881312 catgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttattagtgttttttatatcctgatcaaatataa 10881406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 17040391 - 17040290
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||| || ||||||||| |||||  |||||||  |||||||| ||||| ||||||||  |||||||||| || |||||||  |||||| ||||    
T  17040391 attgatccatgctgatgtgaaactttatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatactatttatatcctgatcaaatat 17040292  T
Q  403 aa 404  Q
    ||    
T  17040291 aa 17040290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 198 - 404
Target Start/End: Complemental strand, 5891 - 5680
Alignment:
Q  198 gcaacgacggaattcgatcagtttatttcctttgctatgtt---tatt-ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctgg 293  Q
    |||||||||||| || |||  ||||||| |||| |||||||   |||| |||| ||||||| |||||||||| ||||||||| || |||||||| |||      
T  5891 gcaacgacggaactctatcgatttattttctttactatgttgtttattattttaatcatgtctagctaatttcctttgattaggtctgagatgattcttt 5792  T
Q  294 aataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt--actcaattcatctgttcttaatgctttttatatat 391  Q
      ||||  |||||||||||||||| |||||||| ||||||  ||| |||  ||||||||||||  | ||||||||  |||||||||||||||||||||      
T  5791 g-taacctttattgaaccatgttgctgtgaaaccctatttattgtaaatgacaatctagttttttattcaattcaattgttcttaatgctttttatattc 5693  T
Q  392 tgatcacatataa 404  Q
    |||||| ||||||    
T  5692 tgatcaaatataa 5680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 406
Target Start/End: Complemental strand, 3068364 - 3068261
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||| |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  3068364 attgaaacatgttgctgtgaaactctatttattgtgaataacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 3068265  T
Q  403 aatc 406  Q
    ||||    
T  3068264 aatc 3068261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 4546596 - 4546697
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  4546596 attgaaccatgttgctgtgaaactctatttattgtgaattacaatctagttttcattcaattcaattgttcttaatgctttttatattctgatcaaatat 4546695  T
Q  403 aa 404  Q
    ||    
T  4546696 aa 4546697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 23225293 - 23225192
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  23225293 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 23225194  T
Q  403 aa 404  Q
    ||    
T  23225193 aa 23225192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 235 - 384
Target Start/End: Original strand, 26557158 - 26557308
Alignment:
Q  235 tgtttattt-tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctattt 333  Q
    ||||||||| ||| ||||||| |||||||||| |   |||||||| |||||||| ||||   |||| || |||||||||||||| |||||||||||||||    
T  26557158 tgtttatttcttttatcatgtctagctaatttccagagattaagtctgagatgattctgtg-taaccctaattgaaccatgttgctgtgaaactctattt 26557256  T
Q  334 cctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttt 384  Q
      |||||||  |||||||| ||||| ||||||||  ||||||||||||||||    
T  26557257 aatgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttt 26557308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 4695251 - 4695352
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  4695251 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttattaatgctttttatatcctgatcaaatat 4695350  T
Q  403 aa 404  Q
    ||    
T  4695351 aa 4695352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 8276712 - 8276813
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  ||| |||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  8276712 attgaaccatgttgctgtgaaactctatttattgttaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 8276811  T
Q  403 aa 404  Q
    ||    
T  8276812 aa 8276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 9133147 - 9133046
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  ||||||||||||||| |||||  |||||| ||||    
T  9133147 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttctatatcctgatcaaatat 9133048  T
Q  403 aa 404  Q
    ||    
T  9133047 aa 9133046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 22611994 - 22611893
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| |||||||||| ||||||||||||  |||||||   ||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  22611994 attgaaacatgttgttgcgaaactctatttattgtgaatgataatctagtttttattcaattcaattgttcttaatgctttttatattttgatcaaatat 22611895  T
Q  403 aa 404  Q
    ||    
T  22611894 aa 22611893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 37166534 - 37166433
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  ||||||   |||||||||||| | ||||||||  ||||||||||||||||||||| ||||||| ||||    
T  37166534 attgagccatgttgctgtgaaactctatttattgtgaacgacaatctagtttttattcaattcaattgttcttaatgctttttatatcttgatcaaatat 37166435  T
Q  403 aa 404  Q
    ||    
T  37166434 aa 37166433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 4596396 - 4596310
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| | |||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  4596396 attgaaccatgttgctctgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 4596310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 404
Target Start/End: Complemental strand, 45287516 - 45287355
Alignment:
Q  243 ttttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaat 342  Q
    |||| ||||||| || |||| || ||||||||| || |||||||||||||   |||| || |||||  ||||||| ||||||||| |||||  |||||||    
T  45287516 tttttatcatgtctaactaaattcctttgattaggtctgagatgaatctgtg-taaccctaattgattcatgttgctgtgaaactttatttattgtgaat 45287418  T
Q  343 atcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
      |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  45287417 gacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 45287355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 10468871 - 10468972
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| ||||||||||||||||  |||||| ||||    
T  10468871 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgtttttaatgctttttatatcctgatcaaatat 10468970  T
Q  403 aa 404  Q
    ||    
T  10468971 aa 10468972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 13450163 - 13450062
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| ||||||||||||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  13450163 attgatccatgttgttgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 13450064  T
Q  403 aa 404  Q
    ||    
T  13450063 aa 13450062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 14683831 - 14683730
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||  ||||||||| ||||| ||||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  14683831 attgaaccatgtttctgtgaaactttatttactgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 14683732  T
Q  403 aa 404  Q
    ||    
T  14683731 aa 14683730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 17730541 - 17730642
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||| ||  |||||||  |||||||| ||||| ||||||||  ||||||||||| |||||||||  |||||| ||||    
T  17730541 attgaaccatgttgctgtgaaactctacttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgatttttatatcctgatcaaatat 17730640  T
Q  403 aa 404  Q
    ||    
T  17730641 aa 17730642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 26136515 - 26136414
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  26136515 attgaaacatgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 26136416  T
Q  403 aa 404  Q
    ||    
T  26136415 aa 26136414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 26144895 - 26144794
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  26144895 attgaaacatgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 26144796  T
Q  403 aa 404  Q
    ||    
T  26144795 aa 26144794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 390
Target Start/End: Original strand, 24917938 - 24918009
Alignment:
Q  319 tgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatata 390  Q
    |||||||||||||| | ||||||||| ||| |||||||| ||||| ||  ||||||||||||||||||||||    
T  24917938 tgtgaaactctattgcatgtgaatattaatttagttttattcaatccaattgttcttaatgctttttatata 24918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 5242532 - 5242454
Alignment:
Q  312 atgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||||||||| |  |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||    
T  5242532 atgttgttgtgaaactctatctattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 5242454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 6603185 - 6603286
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  6603185 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 6603284  T
Q  403 aa 404  Q
    ||    
T  6603285 aa 6603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 7227254 - 7227355
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| | |||||||||||||  |||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  7227254 attgaaacatgttgctatgaaactctatttattgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 7227353  T
Q  403 aa 404  Q
    ||    
T  7227354 aa 7227355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 13809900 - 13809799
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||||||||| |  |||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  13809900 attgaaacatgttgatgtgaaactctatctattgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatattatgatcaaatat 13809801  T
Q  403 aa 404  Q
    ||    
T  13809800 aa 13809799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 13842367 - 13842468
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  13842367 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 13842466  T
Q  403 aa 404  Q
    ||    
T  13842467 aa 13842468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 16165475 - 16165576
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  16165475 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatattctgatcaaatat 16165574  T
Q  403 aa 404  Q
    ||    
T  16165575 aa 16165576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 5796280 - 5796379
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctgttcttaatgctttttatatattgatcacatata 403  Q
    |||||||||||||| |||||||||| || |  | |||||| ||||||||||||| ||||||||  | ||||||||| |||||||||  |||||| |||||    
T  5796280 attgaaccatgttgctgtgaaactc-atctattatgaataacaatctagttttattcaattcaattattcttaatgttttttatatcctgatcaaatata 5796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 389
Target Start/End: Complemental strand, 18562952 - 18562835
Alignment:
Q  271 gattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattcatctg 370  Q
    ||||| || |||||||| ||||   |||| || ||||||||||| |||||| ||||||||||   | | | |||| ||||||||||| ||||||||  ||    
T  18562952 gattaggtctgagatgattctgatgtaaccctaattgaaccatgctgttgtaaaactctattat-tataattatctatctagttttattcaattcagttg 18562854  T
Q  371 ttcttaatgctttttatat 389  Q
    |||||||||||||||||||    
T  18562853 ttcttaatgctttttatat 18562835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 20081105 - 20081004
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| || |||| |||||||||||||||  |||||||   |||||| |||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  20081105 attgaaacaagttgctgtgaaactctatttattgtgaatgataatctaatttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 20081006  T
Q  403 aa 404  Q
    ||    
T  20081005 aa 20081004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 48645201 - 48645302
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | |||| |||  |||||||||||||||||||||  |||||| ||||    
T  48645201 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaaatcaattgttcttaatgctttttatatcctgatcaaatat 48645300  T
Q  403 aa 404  Q
    ||    
T  48645301 aa 48645302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 404
Target Start/End: Original strand, 20594007 - 20594091
Alignment:
Q  321 tgaaactctatttcctgtgaatatcaatctagtt-ttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    |||||||||||||  |||||||  || ||||||| ||| ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  20594007 tgaaactctatttattgtgaatgacattctagttcttattcaattcaattgttcttaatgctttttatattctgatcaaatataa 20594091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 9865114 - 9865013
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||| ||| ||||| ||||||||  |||||||| ||||||||||||  |||||| ||||    
T  9865114 attgatccatgttgctgtgaaactctatttattattaatgacaatgtagtttttattcaattcaattgttcttattgctttttatatcctgatcaaatat 9865015  T
Q  403 aa 404  Q
    ||    
T  9865014 aa 9865013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 4171 - 4070
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||   ||||||||||| | |||||||| ||||||||||||||||||||||  |||||| ||||    
T  4171 attgaaccatgttgctgtgaaactctatttattgtgaatgaaaatctagtttttattcaattcaactgttcttaatgctttttatatcctgatcaaatat 4072  T
Q  403 aa 404  Q
    ||    
T  4071 aa 4070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 19135 - 19236
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  19135 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 19234  T
Q  403 aa 404  Q
    ||    
T  19235 aa 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 24561 - 24662
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||||||||||||||||||   |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  24561 attgaaccatgttgttgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 24660  T
Q  403 aa 404  Q
    ||    
T  24661 aa 24662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 5084 - 5178
Alignment:
Q  296 taactcttattgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    ||||||| || |||||||||||||||||||||||||||  |||||||  |||| ||| ||||| |||||||| ||||| ||||||||||||||||    
T  5084 taactctaatagaaccatgttgttgtgaaactctatttattgtgaatgacaatatagtttttattcaattcaactgtttttaatgctttttatat 5178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 59065 - 58964
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  59065 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 58966  T
Q  403 aa 404  Q
    ||    
T  58965 aa 58964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 67907 - 67806
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||||||||||| |||||||||||||||  | |||||  |||||||| ||||| ||||||||  |||||||||||||||||||||  |||||| ||||    
T  67907 attgaaccatgttgctgtgaaactctatttattatgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 67808  T
Q  403 aa 404  Q
    ||    
T  67807 aa 67806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 3394 - 3308
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||| ||||||| |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||||||||||||||||||||    
T  3394 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatat 3308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 404
Target Start/End: Complemental strand, 3723 - 3564
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaata 343  Q
    ||||||||||| ||||||||||  |||||||| || |||||||| | ||   |||| || |||||| || |||| |||||||||||||||  |||||||     
T  3723 tttgatcatgtctagctaatttcttttgattaggtctgagatgattttgtg-taaccctaattgaaacaagttgctgtgaaactctatttattgtgaatg 3625  T
Q  344 tcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
     ||| |||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  3624 acaa-ctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 1486 - 1587
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| |||||||||||||||  |||| ||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  1486 attgaaacatgttgctgtgaaactctatttattgtgtatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 1585  T
Q  403 aa 404  Q
    ||    
T  1586 aa 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 26869 - 26980
Alignment:
Q  244 tttgatcatgtttagctaattttctttgattaagtgtgagatgaatctggaataactcttattgaaccatgttgttgtgaaactctatttcctgtgaata 343  Q
    ||||||||||| ||| ||||||  |||||||| || |||||||| ||||   |||| || |||||||||||||| |||||||||||||||  |||||||     
T  26869 tttgatcatgtctaggtaatttcatttgattaggtctgagatgattctgtg-taaccctaattgaaccatgttgctgtgaaactctatttattgtgaatg 26967  T
Q  344 tcaatctagtttt 356  Q
     ||||||||||||    
T  26968 acaatctagtttt 26980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 19095 - 19197
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag--ttttactcaattcatctgttcttaatgctttttatatattgatcacata 401  Q
    |||||| ||||||| |||||||||||||||  |||||||  ||||||||  ||||| ||||||||  ||||| |||||||| |||||| ||||||| |||    
T  19095 attgaaacatgttgctgtgaaactctatttattgtgaatgacaatctagttttttattcaattcaattgttcataatgcttgttatatcttgatcaaata 19194  T
Q  402 taa 404  Q
    |||    
T  19195 taa 19197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 2455 - 2373
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagt-tttactcaattcatctgttcttaatgcttttt 385  Q
    |||||||||||||| |||||||||||||||  |||||||  ||||||| | |||| ||||||||  |||||||||||||||||    
T  2455 attgaaccatgttgctgtgaaactctatttattgtgaatgacaatctaatgtttattcaattcaattgttcttaatgcttttt 2373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 8601 - 8515
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||| ||||||  |||||||  |||||||| ||||| ||||||||  | |||||||||||||||||||    
T  8601 attgaaccatgttgatgtgaaacactatttattgtgaatgacaatctagtttttattcaattcaatttttcttaatgctttttatat 8515  T

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Target: scaffold0520; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 4362 - 4276
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatat 389  Q
    |||||||||||||| |||||||| ||||||  |||||||  |||||||| ||||| ||||||||  | ||||||| |||||||||||    
T  4362 attgaaccatgttgatgtgaaacactatttattgtgaatgacaatctagtttttattcaattcaattattcttaaagctttttatat 4276  T

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Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 19042 - 19136
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  19042 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 19136  T

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Target: scaffold0084; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 29112 - 29206
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| ||||||||||||||   |||||||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||||    
T  29112 catgttgctgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatataa 29206  T

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Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 404
Target Start/End: Original strand, 30841 - 30935
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||||||||||||||   |||||||  |||||||| ||||| ||||||||  | |||||||||||||||||||  |||||| ||||||    
T  30841 catgttgttgtgaaactctattatttgtgaatgacaatctagtttttattcaattcaatttttcttaatgctttttatatcctgatcaaatataa 30935  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 89509 - 89610
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    ||||| |||||||| |||||||||||||||  | | |||  |||||||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  89509 attgatccatgttgctgtgaaactctatttattattaatgacaatctagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 89608  T
Q  403 aa 404  Q
    ||    
T  89609 aa 89610  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 292763 - 292864
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatat 402  Q
    |||||| ||||||| ||||||| |||||||  |||||||  |||| ||||||| | ||||||||  |||||||||||||||||||||  |||||| ||||    
T  292763 attgaaacatgttgctgtgaaattctatttattgtgaatgacaatttagtttttattcaattcaattgttcttaatgctttttatatcctgatcaaatat 292862  T
Q  403 aa 404  Q
    ||    
T  292863 aa 292864  T

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Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 404
Target Start/End: Complemental strand, 57969 - 57871
Alignment:
Q  307 gaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||||||  |||||||||||||||  |||||||  |||||||| ||||| ||||||||  |||| |||||| |||||||||  |||||| ||||||    
T  57969 gaaccatgttactgtgaaactctatttattgtgaatgacaatctagtttttattcaattcaattgtttttaatgttttttatatcctgatcaaatataa 57871  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 404
Target Start/End: Complemental strand, 118821 - 118727
Alignment:
Q  311 catgttgttgtgaaactctatttcctgtgaatatcaatctagtttt-actcaattcatctgttcttaatgctttttatatattgatcacatataa 404  Q
    ||||||| |||||||||||||||  |||||||  |||| ||||||| | ||||||||  ||||||||||| |||||||||  |||||| ||||||    
T  118821 catgttgctgtgaaactctatttattgtgaatgacaatttagtttttattcaattcaattgttcttaatgttttttatatcctgatcaaatataa 118727  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 31451 - 31512
Alignment:
Q  305 ttgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctagttttactcaattca 366  Q
    ||||| ||||| ||||||||||| |||| | | |||||||||||||||||||| ||||||||    
T  31451 ttgaaacatgtggttgtgaaactatattgcttatgaatatcaatctagttttattcaattca 31512  T

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Target: scaffold1785 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 998 - 1076
Alignment:
Q  304 attgaaccatgttgttgtgaaactctatttcctgtgaatatcaatctag-ttttactcaattcatctgttcttaatgct 381  Q
    |||||| ||||||| |||||||||||||||  |||||||  || ||||| ||||| ||||||||  |||||||||||||    
T  998 attgaaacatgttgctgtgaaactctatttattgtgaatgacattctagtttttattcaattcaattgttcttaatgct 1076  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 84980 - 85009
Alignment:
Q  304 attgaaccatgttgttgtgaaactctattt 333  Q
    ||||||||||||||||||||||||||||||    
T  84980 attgaaccatgttgttgtgaaactctattt 85009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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