View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1148_high_51 (Length: 300)
Name: NF1148_high_51
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1148_high_51 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 1049148 - 1048878
Alignment:
| Q |
1 |
attgctaagagaaacgtccttttgaaaccaacttgtggttcagaggggaaacagcaaaagcaagagtgaaattttgagatcataaagagaataaaaggga |
100 |
Q |
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| T |
1049148 |
attgctaagagaaacgtccttttgaaaccaacttgtggttcagaggggaaacagcaaaagcaagagtgaaattttgagatcataaagagaataaaaggga |
1049049 |
T |
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| Q |
101 |
caaagaaaattgtttgagggatcaaaaagtcataattatttaatggaagactttagaaatagtattccattgagggtcctccattgagtactaattaaga |
200 |
Q |
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| T |
1049048 |
caaagaaaattgtttgagggatcaaaaagtcataattatttaatggaagactttggaaatagtattccattgagggtcctccattgagtactaattaaga |
1048949 |
T |
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| Q |
201 |
ttttcatacttcgttgtaaagaaacttttatgctttattggaattcatagaagaatgaataatgtttggtt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1048948 |
ttttcatacttcgttgtaaagaaacttttatgctttattggaattcatagaagaatgaataatgtttggtt |
1048878 |
T |
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