View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1148_high_76 (Length: 207)
Name: NF1148_high_76
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1148_high_76 |
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Alignment Details
Target: chr8 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 36151640 - 36151574
Alignment:
| Q |
55 |
cacagaccctgcagcagaaacatcagcaggtaaatccttgccatcaccatcatcactaccagcacca |
121 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36151640 |
cacagaccctgcagcagaaatatcagcaggtaaatccttgccatcaccatcatcactaccagcacca |
36151574 |
T |
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Target: chr8; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 36155026 - 36154960
Alignment:
| Q |
55 |
cacagaccctgcagcagaaacatcagcaggtaaatccttgccatcaccatcatcactaccagcacca |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36155026 |
cacagaccctgcagcagaaacatcagcaggtaaatccttaccatcaccatcatcactaccagcacca |
36154960 |
T |
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