View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1148_low_48 (Length: 343)

Name: NF1148_low_48
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1148_low_48
NF1148_low_48
[»] chr5 (42 HSPs)
chr5 (180-343)||(2865139-2865301)
chr5 (177-343)||(29455126-29455291)
chr5 (180-343)||(18183353-18183515)
chr5 (181-343)||(5819313-5819474)
chr5 (181-343)||(8647438-8647599)
chr5 (181-343)||(19359136-19359297)
chr5 (180-343)||(24362220-24362382)
chr5 (180-343)||(14215627-14215789)
chr5 (180-343)||(8460929-8461091)
chr5 (180-343)||(15708970-15709131)
chr5 (180-343)||(164575-164737)
chr5 (184-343)||(15372257-15372415)
chr5 (180-342)||(19359520-19359682)
chr5 (180-343)||(14463905-14464066)
chr5 (184-342)||(5818932-5819090)
chr5 (180-342)||(8647822-8647984)
chr5 (184-342)||(18182973-18183131)
chr5 (183-343)||(24331944-24332107)
chr5 (180-342)||(24331558-24331722)
chr5 (176-342)||(8461315-8461481)
chr5 (183-342)||(14215243-14215402)
chr5 (187-342)||(24361843-24361997)
chr5 (179-343)||(16018587-16018748)
chr5 (183-342)||(2864756-2864915)
chr5 (203-343)||(25000112-25000251)
chr5 (187-342)||(24325218-24325372)
chr5 (181-341)||(164191-164350)
chr5 (184-343)||(16018970-16019129)
chr5 (176-342)||(29454735-29454901)
chr5 (179-343)||(25000472-25000636)
chr5 (181-322)||(7349422-7349562)
chr5 (181-342)||(15709353-15709513)
chr5 (181-308)||(7348559-7348685)
chr5 (183-295)||(15371873-15371983)
chr5 (182-302)||(4222147-4222266)
chr5 (181-323)||(4623148-4623287)
chr5 (187-320)||(6019177-6019309)
chr5 (181-320)||(4219663-4219800)
chr5 (182-321)||(6018315-6018452)
chr5 (193-321)||(4624631-4624758)
chr5 (263-322)||(13814133-13814190)
chr5 (312-342)||(14340793-14340823)
[»] chr1 (38 HSPs)
chr1 (177-343)||(15646579-15646744)
chr1 (179-343)||(50970662-50970825)
chr1 (179-343)||(5540202-5540365)
chr1 (184-343)||(15173099-15173257)
chr1 (180-343)||(18984118-18984280)
chr1 (176-343)||(29306948-29307114)
chr1 (178-343)||(29869617-29869781)
chr1 (183-343)||(33144303-33144462)
chr1 (177-343)||(5962962-5963127)
chr1 (181-343)||(21856427-21856588)
chr1 (180-331)||(9018972-9019122)
chr1 (180-343)||(26859444-26859605)
chr1 (181-343)||(8678926-8679086)
chr1 (181-343)||(17433216-17433377)
chr1 (183-343)||(39154021-39154180)
chr1 (181-343)||(29307325-29307487)
chr1 (182-342)||(5539817-5539977)
chr1 (183-343)||(17433598-17433758)
chr1 (180-340)||(50970277-50970437)
chr1 (176-308)||(18984538-18984669)
chr1 (179-342)||(33143913-33144078)
chr1 (181-342)||(29870003-29870164)
chr1 (182-299)||(8678542-8678658)
chr1 (182-341)||(4636356-4636515)
chr1 (183-342)||(21856044-21856203)
chr1 (179-342)||(39154404-39154567)
chr1 (180-342)||(15173478-15173639)
chr1 (177-322)||(52268286-52268430)
chr1 (180-342)||(15646191-15646353)
chr1 (181-299)||(26859059-26859176)
chr1 (180-343)||(9019346-9019509)
chr1 (182-342)||(5962579-5962739)
chr1 (241-343)||(4636033-4636133)
chr1 (171-267)||(2733416-2733512)
chr1 (183-298)||(52269177-52269291)
chr1 (183-256)||(47826966-47827039)
chr1 (206-278)||(47827036-47827108)
chr1 (236-342)||(17112336-17112442)
[»] chr2 (37 HSPs)
chr2 (184-343)||(11090524-11090682)
chr2 (180-343)||(239352-239513)
chr2 (180-343)||(1978107-1978269)
chr2 (180-343)||(22374319-22374481)
chr2 (176-343)||(40027135-40027301)
chr2 (173-343)||(40815729-40815898)
chr2 (177-343)||(26538093-26538258)
chr2 (181-343)||(43058333-43058494)
chr2 (180-343)||(18451215-18451377)
chr2 (184-343)||(14432145-14432303)
chr2 (187-343)||(3025472-3025626)
chr2 (180-343)||(26538462-26538625)
chr2 (181-343)||(28616613-28616775)
chr2 (180-342)||(7446730-7446892)
chr2 (184-343)||(8425744-8425902)
chr2 (179-322)||(20444747-20444889)
chr2 (179-342)||(18450828-18450991)
chr2 (179-338)||(7446340-7446497)
chr2 (183-342)||(40815347-40815506)
chr2 (180-342)||(11090904-11091066)
chr2 (180-342)||(22374709-22374871)
chr2 (182-322)||(35781068-35781207)
chr2 (179-342)||(40027524-40027687)
chr2 (180-342)||(43058717-43058878)
chr2 (180-299)||(28847123-28847241)
chr2 (180-322)||(20440437-20440577)
chr2 (181-322)||(35779708-35779848)
chr2 (179-342)||(28616998-28617161)
chr2 (182-342)||(239736-239896)
chr2 (180-308)||(1978528-1978655)
chr2 (184-341)||(8425358-8425514)
chr2 (181-341)||(3025848-3026006)
chr2 (183-342)||(14432525-14432684)
chr2 (183-322)||(8972239-8972377)
chr2 (183-322)||(15551501-15551639)
chr2 (183-323)||(15552458-15552596)
chr2 (106-180)||(16195049-16195125)
[»] chr4 (57 HSPs)
chr4 (177-343)||(33109680-33109845)
chr4 (183-343)||(23494445-23494604)
chr4 (183-343)||(46193789-46193948)
chr4 (180-343)||(25937669-25937831)
chr4 (183-341)||(4219559-4219716)
chr4 (183-343)||(38962203-38962362)
chr4 (180-343)||(25447620-25447782)
chr4 (181-343)||(11153531-11153692)
chr4 (180-341)||(12234328-12234488)
chr4 (178-343)||(15523618-15523782)
chr4 (184-343)||(22434562-22434718)
chr4 (179-343)||(22170321-22170483)
chr4 (180-343)||(51020796-51020958)
chr4 (184-342)||(54995072-54995230)
chr4 (181-342)||(22434179-22434340)
chr4 (180-343)||(48526195-48526356)
chr4 (184-343)||(54995452-54995609)
chr4 (181-343)||(46193405-46193567)
chr4 (180-341)||(15523234-15523395)
chr4 (181-342)||(25447247-25447408)
chr4 (179-343)||(2118680-2118842)
chr4 (171-342)||(45082808-45082979)
chr4 (180-298)||(23494872-23494989)
chr4 (180-342)||(20470895-20471057)
chr4 (184-343)||(45082435-45082591)
chr4 (181-342)||(12234713-12234874)
chr4 (179-342)||(11153144-11153307)
chr4 (182-322)||(44892553-44892692)
chr4 (179-342)||(48526565-48526728)
chr4 (184-342)||(4219943-4220101)
chr4 (179-308)||(25938090-25938218)
chr4 (180-308)||(33109883-33110010)
chr4 (180-342)||(51021180-51021341)
chr4 (249-343)||(12503820-12503913)
chr4 (179-342)||(18751597-18751760)
chr4 (183-308)||(2118295-2118419)
chr4 (182-322)||(20958266-20958403)
chr4 (183-296)||(18763951-18764063)
chr4 (188-320)||(20957196-20957327)
chr4 (179-318)||(16690934-16691072)
chr4 (181-299)||(35363028-35363146)
chr4 (199-322)||(43243686-43243807)
chr4 (180-322)||(48293593-48293734)
chr4 (182-322)||(44890518-44890657)
chr4 (199-320)||(43281198-43281317)
chr4 (181-322)||(48294947-48295088)
chr4 (184-322)||(48713751-48713888)
chr4 (198-342)||(12503453-12503597)
chr4 (180-318)||(48708294-48708431)
chr4 (234-322)||(43242323-43242410)
chr4 (178-308)||(10258306-10258435)
chr4 (179-251)||(16318251-16318323)
chr4 (181-318)||(16691481-16691616)
chr4 (291-343)||(18751986-18752038)
chr4 (242-322)||(44220782-44220861)
chr4 (176-245)||(55677439-55677509)
chr4 (287-343)||(17504078-17504134)
[»] chr7 (27 HSPs)
chr7 (179-343)||(37786765-37786928)
chr7 (184-343)||(19830423-19830581)
chr7 (181-343)||(19590525-19590686)
chr7 (179-343)||(38858641-38858804)
chr7 (181-343)||(32004998-32005159)
chr7 (180-343)||(2659224-2659386)
chr7 (180-343)||(34534175-34534337)
chr7 (180-343)||(35289285-35289447)
chr7 (187-343)||(23953113-23953268)
chr7 (179-343)||(29100235-29100398)
chr7 (169-343)||(4641428-4641601)
chr7 (180-342)||(19590909-19591071)
chr7 (180-342)||(2658838-2659000)
chr7 (180-342)||(38859025-38859187)
chr7 (184-343)||(4478084-4478242)
chr7 (193-342)||(29099862-29100011)
chr7 (180-341)||(32004613-32004774)
chr7 (180-322)||(38160950-38161091)
chr7 (180-340)||(37787153-37787313)
chr7 (180-320)||(28583438-28583577)
chr7 (180-342)||(34533790-34533952)
chr7 (181-298)||(35288903-35289019)
chr7 (179-342)||(19830804-19830966)
chr7 (182-322)||(28584327-28584466)
chr7 (184-342)||(4641828-4641983)
chr7 (180-299)||(23952729-23952848)
chr7 (29-107)||(4887749-4887824)
[»] chr6 (33 HSPs)
chr6 (179-343)||(15828025-15828188)
chr6 (180-343)||(18257136-18257298)
chr6 (180-343)||(20741099-20741261)
chr6 (180-342)||(2319671-2319832)
chr6 (181-343)||(10900314-10900475)
chr6 (181-343)||(11276966-11277127)
chr6 (182-343)||(31470700-31470860)
chr6 (181-343)||(1149815-1149977)
chr6 (180-343)||(12935541-12935703)
chr6 (169-343)||(11444975-11445148)
chr6 (180-342)||(12935156-12935318)
chr6 (182-341)||(18505305-18505463)
chr6 (180-343)||(28472636-28472797)
chr6 (180-343)||(29859825-29859986)
chr6 (184-343)||(2322603-2322760)
chr6 (179-343)||(23073997-23074149)
chr6 (184-343)||(10899942-10900101)
chr6 (180-342)||(11445371-11445533)
chr6 (180-342)||(22219737-22219899)
chr6 (180-342)||(23075512-23075674)
chr6 (179-342)||(20741485-20741651)
chr6 (181-343)||(4811372-4811533)
chr6 (184-342)||(18504922-18505080)
chr6 (181-342)||(18257521-18257682)
chr6 (177-342)||(31470311-31470476)
chr6 (179-342)||(11276588-11276751)
chr6 (183-322)||(29033436-29033575)
chr6 (180-269)||(1149464-1149553)
chr6 (178-318)||(3835135-3835274)
chr6 (182-308)||(15827639-15827766)
chr6 (183-322)||(29035042-29035180)
chr6 (180-322)||(18296144-18296284)
chr6 (181-308)||(4811675-4811801)
[»] scaffold0295 (2 HSPs)
scaffold0295 (180-343)||(4792-4954)
scaffold0295 (183-296)||(5222-5334)
[»] chr8 (31 HSPs)
chr8 (180-343)||(19176674-19176836)
chr8 (180-341)||(41681133-41681292)
chr8 (180-343)||(12571862-12572025)
chr8 (180-343)||(31133219-31133381)
chr8 (179-343)||(9930041-9930204)
chr8 (180-343)||(11656454-11656617)
chr8 (185-343)||(13224645-13224801)
chr8 (179-343)||(33328156-33328319)
chr8 (180-343)||(44831629-44831791)
chr8 (180-342)||(19176289-19176451)
chr8 (179-342)||(13225023-13225186)
chr8 (171-342)||(44831237-44831408)
chr8 (181-343)||(9178020-9178180)
chr8 (181-299)||(41681562-41681679)
chr8 (179-342)||(11656841-11657004)
chr8 (171-342)||(12572235-12572406)
chr8 (184-342)||(9928912-9929070)
chr8 (182-341)||(31133605-31133764)
chr8 (183-342)||(33328524-33328683)
chr8 (180-308)||(34540967-34541094)
chr8 (180-342)||(33742921-33743082)
chr8 (239-343)||(33743303-33743406)
chr8 (184-343)||(4630176-4630328)
chr8 (180-278)||(11336970-11337068)
chr8 (180-336)||(4629796-4629952)
chr8 (184-320)||(10918129-10918264)
chr8 (179-322)||(8073957-8074098)
chr8 (260-322)||(43958264-43958325)
chr8 (164-221)||(10919691-10919748)
chr8 (180-214)||(9177666-9177700)
chr8 (275-342)||(9177725-9177793)
[»] chr3 (53 HSPs)
chr3 (180-343)||(31779036-31779198)
chr3 (181-343)||(39555961-39556122)
chr3 (180-343)||(20840559-20840721)
chr3 (184-343)||(5136983-5137141)
chr3 (184-343)||(41046703-41046861)
chr3 (181-343)||(32535343-32535508)
chr3 (180-337)||(48452988-48453144)
chr3 (179-343)||(37726927-37727090)
chr3 (180-343)||(24300940-24301102)
chr3 (178-343)||(17464875-17465040)
chr3 (179-343)||(23644460-23644623)
chr3 (181-343)||(43973441-43973602)
chr3 (178-343)||(27393961-27394125)
chr3 (180-343)||(26837740-26837901)
chr3 (183-343)||(25853611-25853770)
chr3 (184-343)||(26274951-26275108)
chr3 (180-343)||(30104481-30104642)
chr3 (180-342)||(43973824-43973986)
chr3 (185-331)||(22425209-22425354)
chr3 (177-342)||(27393657-27393822)
chr3 (181-342)||(37727314-37727475)
chr3 (179-342)||(20840945-20841108)
chr3 (179-342)||(39555576-39555739)
chr3 (180-342)||(17464490-17464652)
chr3 (179-342)||(31778651-31778814)
chr3 (180-342)||(4275748-4275910)
chr3 (184-322)||(25612382-25612519)
chr3 (181-342)||(25853234-25853395)
chr3 (180-343)||(29801799-29801962)
chr3 (180-342)||(5137365-5137527)
chr3 (181-342)||(23644849-23645010)
chr3 (178-342)||(30098147-30098311)
chr3 (184-342)||(26837363-26837521)
chr3 (179-308)||(32534957-32535085)
chr3 (182-323)||(32697105-32697244)
chr3 (179-342)||(26274565-26274728)
chr3 (180-342)||(22424813-22424975)
chr3 (181-303)||(29801356-29801477)
chr3 (181-322)||(50116814-50116954)
chr3 (181-321)||(23228414-23228552)
chr3 (179-342)||(24300555-24300717)
chr3 (180-320)||(45965937-45966076)
chr3 (180-322)||(51474738-51474880)
chr3 (180-322)||(37220556-37220697)
chr3 (206-342)||(41047083-41047218)
chr3 (194-322)||(25419157-25419284)
chr3 (182-278)||(51473429-51473525)
chr3 (183-320)||(25420548-25420684)
chr3 (180-267)||(37222030-37222117)
chr3 (236-310)||(18010162-18010235)
chr3 (298-343)||(29801532-29801577)
chr3 (275-322)||(23227349-23227396)
chr3 (184-224)||(32695706-32695746)
[»] scaffold0951 (2 HSPs)
scaffold0951 (171-343)||(1657-1828)
scaffold0951 (180-342)||(2051-2213)
[»] scaffold0019 (1 HSPs)
scaffold0019 (180-343)||(134057-134219)
[»] scaffold1223 (2 HSPs)
scaffold1223 (183-343)||(755-913)
scaffold1223 (181-308)||(1160-1286)
[»] scaffold0273 (2 HSPs)
scaffold0273 (180-343)||(4591-4753)
scaffold0273 (220-342)||(4242-4364)
[»] scaffold0007 (2 HSPs)
scaffold0007 (177-343)||(64298-64463)
scaffold0007 (179-297)||(64735-64852)
[»] scaffold0432 (2 HSPs)
scaffold0432 (184-341)||(10259-10414)
scaffold0432 (184-278)||(9935-10029)
[»] scaffold0417 (2 HSPs)
scaffold0417 (200-343)||(10640-10782)
scaffold0417 (181-308)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (179-343)||(18833-18995)
scaffold0176 (181-280)||(19067-19166)
[»] scaffold0027 (2 HSPs)
scaffold0027 (180-343)||(42543-42704)
scaffold0027 (178-343)||(42166-42331)
[»] scaffold1585 (1 HSPs)
scaffold1585 (182-322)||(568-707)
[»] scaffold0157 (2 HSPs)
scaffold0157 (249-343)||(16564-16657)
scaffold0157 (198-342)||(16880-17024)
[»] scaffold0057 (2 HSPs)
scaffold0057 (184-322)||(61863-62000)
scaffold0057 (180-255)||(61027-61102)
[»] scaffold0113 (1 HSPs)
scaffold0113 (179-308)||(28662-28790)
[»] scaffold0076 (1 HSPs)
scaffold0076 (184-278)||(8457-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (230-322)||(7693-7784)
[»] scaffold1696 (1 HSPs)
scaffold1696 (185-322)||(454-588)


Alignment Details
Target: chr5 (Bit Score: 128; Significance: 4e-66; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 2865301 - 2865139
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  2865301 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 2865203  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 2865139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 177 - 343
Target Start/End: Complemental strand, 29455291 - 29455126
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||| ||| ||||| ||||||||||| ||||||||| ||||||||||||||||| |    
T  29455291 ttaaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcat-t 29455193  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29455192 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 29455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 18183515 - 18183353
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  18183515 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 18183417  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  18183416 gttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttaga 18183353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 5819474 - 5819313
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||||||||||| |||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttttg 5819376  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  5819375 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttaga 5819313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 8647438 - 8647599
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||||||||| ||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatca-tttttg 8647536  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8647537 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 8647599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 19359136 - 19359297
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatca-tttttg 19359234  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  19359235 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctaga 19359297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 24362382 - 24362220
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| |||| ||||||||||||||| ||||| |||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatca-ttttt 24362284  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 24362220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 14215789 - 14215627
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||  |||| ||||||||||| |||||||||||||||||||| ||||| |||||    
T  14215789 aggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatca-ttttt 14215691  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  14215690 gttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttaga 14215627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 8460929 - 8461091
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||| || |||||||| |||| ||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  8460929 aggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-ttttt 8461027  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttaga 8461091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 15708970 - 15709131
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||| ||  | ||||||||||| |||||||||||||||||||||||||| |||||    
T  15708970 aggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 15709068  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  15709069 gttgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaga 15709131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 164737 - 164575
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | ||||| ||||| |||||||||| |||||| | ||| ||| | ||||||||||| |||||||||||||||||||||||||||||||     
T  164737 aggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt- 164639  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  164638 gttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttaga 164575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 15372415 - 15372257
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-tttttgttg 15372317  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||| || ||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  15372316 cattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttaga 15372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 19359682 - 19359520
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  19359682 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 19359584  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 14464066 - 14463905
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| |||| |  |  |||||||||| ||||||||||| |||||||||||||| |||||    
T  14464066 aggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatca-ttttt 14463968  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  14463967 attgcatttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttaga 14463905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatca-tttttgttg 5819030  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     |||||||||| |||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5819031 catttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 8647984 - 8647822
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  8647984 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 8647886  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||||||| ||||  | ||||| |  ||||| ||||| |||||||||||||||||||    
T  8647885 gttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 18183071  T
Q  284 tatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| || | |||||| | ||| ||||| |||||||||||||||||||    
T  18183072 catttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 24332107 - 24331944
Alignment:
Q  183 cttaattaca-tttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaa-agaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||| ||||||||| || ||||||||| ||||||||| |||  |||| || |||| |||| |||||||||||||||| ||||||||||||||||    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  281 ttgtattttt-cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttaga 24331944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 24331558 - 24331722
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatc-attttt 278  Q
    ||||||||||||| |||||||||||||||||||  |||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  24331558 aggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttt 24331657  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24331658 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 176 - 342
Target Start/End: Complemental strand, 8461481 - 8461315
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt 275  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||||||||||||||||||||||||||     
T  8461481 tttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcat- 8461383  T
Q  276 ttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| || |||||||||| |||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  8461382 ttttgctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||| ||  ||||||||||||| ||||||||| ||||||||| |||||| ||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatca-tttttgtt 14215341  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  14215342 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  187 attacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtat 286  Q
    |||||| ||||||||| | ||||||||||||| ||||| |||  || | ||||| ||||| ||||||||| |||||||||| |||||||||| |||| ||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcattttt-gttgcat 24361941  T
Q  287 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24361942 ttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 16018587 - 16018748
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||| | |  || | ||||||||||| ||||||||||||||||||||||||   ||||    
T  16018587 aaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat--atttt 16018684  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | ||| ||||| ||||||| ||||||||||||||||||||||  |||| ||||||||||||||||    
T  16018685 tattgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttaga 16018748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||||| |||||||||||||||||||| | |  || | ||||||||||| | |||||||||||||||||||||||| ||||||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatca-tttttgtt 2864854  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  2864855 gcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 203 - 343
Target Start/End: Original strand, 25000112 - 25000251
Alignment:
Q  203 tcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccc 302  Q
    ||||||||||||||||||||||   | ||| | |||| |||||| |||| |||| ||||||| |||||||||||||  ||| |||||| |||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcattttta-ttgcattttttgtcctaccccc 25000210  T
Q  303 cattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25000211 cattttattctccaaaaacgtagagaaatgacagttttaga 25000251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 342
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  187 attacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtat 286  Q
    |||||| ||||||||| | ||||||||||||| ||||| |||  || | ||||| ||||| ||||||||| |||||||||| |||||||||| || | ||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcattttt-gtcgcat 24325316  T
Q  287 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  24325317 ttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||| || | |||||||||||| |||||||||||  |||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca--ttttg 164288  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  164289 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 16019129 - 16018970
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||| ||||||||| ||||||||| | | ||||| | ||||||||| |||| |||| ||| ||||||||||||| ||||||||    
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcat-ttttgttg 16019031  T
Q  284 tatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||||||||||| || | |||||  ||||| ||||| ||||||||||||||||||||    
T  16019030 tatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaga 16018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 176 - 342
Target Start/End: Original strand, 29454735 - 29454901
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt 275  Q
    |||||||||||||| || |||||||| | |||||||||||||||||||| | | ||| | ||||||||||| ||||||||||||||||| |||||||| |    
T  29454735 tttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatca-t 29454833  T
Q  276 ttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| || ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  29454834 ttttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 25000636 - 25000472
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||| || ||||||||||||||||||| | | ||| |   ||||||||| ||||||||| |||| ||||||||||| ||||    
T  25000636 aaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatca-tttt 25000538  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||||||| ||| || ||||| |  ||||||||||| ||||||||||||||||||||    
T  25000537 tgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttaga 25000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 7349562 - 7349422
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||| |||||||||| | | ||||| | ||||||||| | ||||||||  ||||||| ||||||| |||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcat-ttttg 7349464  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||| | ||||| |||||||||||||||| | |||||||||||    
T  7349463 ttgcacttttcatcctaccccccattttttcctccaaaaacg 7349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||| | ||||||||||||||||| || ||||||| | ||| ||||||| ||||||||||||||||| | |||||| ||| ||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccc-tttaaaacagaacaaaacggtcctttagttatca-tttctg 15709416  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||||||||| || ||||| |  ||||| || || |||||||||||||||||||    
T  15709415 ttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||||||||||||||| |||||| | |||||||||| | | ||| | ||||||||||| ||||||||||  ||||||  |||||| ||||||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatca-tttttg 7348657  T
Q  281 ttgtatttttcgtcctaccccccatttt 308  Q
    ||| | ||||||||||||||||||||||    
T  7348658 ttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 15371873 - 15371983
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||| ||||||| |||||| |||||||||| | | ||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacga-attggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-tttttgtt 15371970  T
Q  283 gtatttttcgtcc 295  Q
    | |||||||||||    
T  15371971 gcatttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| |||||||||||||||||||| || ||||||| | | ||| | ||||||||||| |||||||||  ||| |||| ||||||| |||| |    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcat-ttttat 4222168  T
Q  282 tgtatttttcgtcctaccccc 302  Q
    || ||||||||||||||||||    
T  4222167 tgcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 323
Target Start/End: Original strand, 4623148 - 4623287
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||| |||||||||| | ||||||||| | | ||||| ||  ||||||| |||||||||  ||||||||||||||| |||||     
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatca-ttttta 4623246  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgt 323  Q
    | | ||||| |||||||  ||||||||||| ||||||||||||    
T  4623247 tggcattttccgtccta--ccccattttatcctccaaaaacgt 4623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 320
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  187 attacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtat 286  Q
    ||||||||||||||| || ||||||||| ||||||||| |||  || | | ||||||||| |||||||||| ||| || ||||||||||||| |||| ||    
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcattttt-gttgcat 6019212  T
Q  287 tttt-cgtcctaccccccattttattctccaaaaa 320  Q
    |||| ||||||||| |||||||||| |||||||||    
T  6019211 tttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 320
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||| |||||||||||||| ||| | || | | | ||| | || |||||||| ||||||||   |||||| | |||||| ||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatca-tttttg 4219761  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaa 320  Q
    ||| ||||||||||||| |||||||||||| |||||||||    
T  4219762 ttgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||||||||||| |||||||||||  |||||||||| ||| ||| |  |||||||||| |||||||||   | |||||||||||| |||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatca-tttttgt 6018412  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaac 321  Q
    || | |||| ||||||||| | |||||   ||||||||||    
T  6018413 tgcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 4624758 - 4624631
Alignment:
Q  193 tttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcg 292  Q
    ||||| |||||||||||||  ||||||||||| | | ||| |  |  ||||||| | ||||||||  || |||||||||||||| | |||| ||||||||    
T  4624758 tttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttat-gttgcatttttcg 4624660  T
Q  293 tcctaccccccattttattctccaaaaac 321  Q
    |||||||||||||||||| || |||||||    
T  4624659 tcctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 13814190 - 13814133
Alignment:
Q  263 ttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||||| |||||||||||    
T  13814190 ttcaattatcattttt-gttgcacttttcgtcctaccccc-attttatcctccaaaaacg 13814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 342
Target Start/End: Complemental strand, 14340823 - 14340793
Alignment:
Q  312 ctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||||||||||||||||||||||||||||    
T  14340823 ctccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 177 - 343
Target Start/End: Complemental strand, 15646744 - 15646579
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||||||| |    
T  15646744 ttaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcat-t 15646646  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  15646645 tttgttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttaga 15646579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 50970825 - 50970662
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  50970825 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 50970727  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50970726 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 50970662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 5540365 - 5540202
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||  |||||||||| |||| |||||||||||||||||||||| |||    
T  5540365 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcat-ttt 5540267  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5540266 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 5540202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 15173099 - 15173257
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||||||||| |||||||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatca-tttttgttg 15173197  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15173198 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 15173257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 18984118 - 18984280
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  18984118 aggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 18984216  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttaga 18984280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 176 - 343
Target Start/End: Original strand, 29306948 - 29307114
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt 275  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| ||| |  |||||||||| |||||||||||||||||||||||||| |    
T  29306948 tttatggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatca-t 29307046  T
Q  276 ttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29307047 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 29307114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 29869617 - 29869781
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||| | |||    
T  29869617 taaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatta-ttt 29869715  T
Q  278 ttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  29869716 ttgttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttaga 29869781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 33144462 - 33144303
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| || ||||||| ||||| ||||||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatca-tttttgtt 33144364  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33144363 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 33144303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 177 - 343
Target Start/End: Complemental strand, 5963127 - 5962962
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||| |||  || | ||||||||||| |||||||||| ||| |||||||||||| |    
T  5963127 ttaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcat-t 5963029  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5963028 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 5962962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 21856588 - 21856427
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||  |||| || |||||||| |||||||||||||||||||| ||||| ||||||    
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatca-tttttg 21856490  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  21856489 ctgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttaga 21856427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 331
Target Start/End: Original strand, 9018972 - 9019122
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| || || ||||||||||| |||||||||||||| ||||| ||||| |||||    
T  9018972 aggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatca-ttttt 9019070  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaat 331  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9019071 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 26859605 - 26859444
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| |||| |||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  26859605 aggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcat-tttt 26859507  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||||| | |||||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttaga 26859444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 8679086 - 8678926
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||||| |||| |||||||||||| |||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcat-ttttg 8678988  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||||    
T  8678987 ttgcatttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttaga 8678926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 17433216 - 17433377
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||| |||||||||||||||| || |||   | | ||||||||||| |||||||||||||||||||| |||||||||| |    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt-g 17433314  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433315 ttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 17433377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 39154021 - 39154180
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||| || ||||||||| ||||||||| |||  || | ||||||||||| |||||||||||||||| |||||||||||||| |||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcattttt-gtt 39154119  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  39154120 gcatttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttaga 39154180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 29307487 - 29307325
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 29307389  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||    
T  29307388 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 29307325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgt 5539915  T
Q  282 tgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||||||||||||||| || ||||| |  ||||| ||||| | ||||||| |||||||||    
T  5539916 tgtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 17433758 - 17433598
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgtt 17433660  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    | ||||||||||||||| || ||||| |  || || ||||| ||||||||||||||||||||    
T  17433659 gcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttaga 17433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 180 - 340
Target Start/End: Original strand, 50970277 - 50970437
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | ||||||||  |||||||||||||||||||||||||| |||||    
T  50970277 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatca-ttttt 50970375  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 340  Q
    |||| |||||||||||||||  | ||||| |  ||||| ||||| |||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 18984669 - 18984538
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt 275  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||| | | ||||| ||||||||||| |||||||||||||||||||||||||||     
T  18984669 tttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat- 18984571  T
Q  276 ttttgttgtatttttcgtcctaccccccatttt 308  Q
    |||||||| ||||||||||||||| || |||||    
T  18984570 ttttgttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 33143913 - 33144078
Alignment:
Q  179 aaggcttaatta--catttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    ||||||||||||  || ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  33143913 aaggcttaattatacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 33144012  T
Q  277 tttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||| || |||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  33144013 ttt-ttgcatatttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| ||||| || |||||||| ||||||||||||||||||||||||||| |||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcat-ttttg 29870066  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||||||||| || ||||| |  ||  | ||||| |||||||||||||||||||    
T  29870065 ttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 8678542 - 8678658
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| | |||||||||||||||||||||||| |||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatca-tttttgt 8678640  T
Q  282 tgtatttttcgtcctacc 299  Q
    || |||||||||||||||    
T  8678641 tgcatttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 341
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcat-ttttgt 4636417  T
Q  282 tgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
    || ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| |||||    
T  4636416 tgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 21856044 - 21856203
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgtt 21856142  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||| ||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  21856143 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 39154567 - 39154404
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| | ||||||| ||||||||||||||||| |||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcat-ttt 39154469  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  || || ||||| |||||||||||| ||||||    
T  39154468 tgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 15173639 - 15173478
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||  |||||||||| ||||||||| |||||||||||||||| |||||    
T  15173639 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcct-gccttttaaaacagaacaaaatggtccttcaattatca-ttttt 15173542  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 177 - 322
Target Start/End: Original strand, 52268286 - 52268430
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||| | | ||||| ||||||||||| |||||||||| ||| |||| |||||| ||    
T  52268286 ttaaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatca-tt 52268384  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||| | |||||||||||||||||||||| | |||||||||||    
T  52268385 tttgttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 15646191 - 15646353
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||| ||| |||||||||||| |||||    
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatca-ttttt 15646289  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| |  ||||| |  ||||| ||| | |||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 26859059 - 26859176
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| || |||||||| |||||||||||||||||||||||||| ||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-tttttg 26859157  T
Q  281 ttgtatttttcgtcctacc 299  Q
    ||| |||||||||||||||    
T  26859158 ttgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 9019509 - 9019346
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| | ||| || || || |||||||| |||||||||||||| |||||||||||| ||||    
T  9019509 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcat-tttt 9019411  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||||| || ||||| |  | ||| ||||| |||||||| |||||||||||    
T  9019410 gttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttaga 9019346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    |||||||||||||||||||||||||||| ||| ||| |||||| ||| ||||  ||||||||||| |||||||||||||| ||||| ||||| |||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatca-tttttgt 5962677  T
Q  282 tgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    || ||||||||| ||||| || ||||| |  ||||| ||||  |||| ||||||||||||||    
T  5962678 tgcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 343
Target Start/End: Original strand, 4636033 - 4636133
Alignment:
Q  241 ttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttt 340  Q
    |||||| |||||||| ||||||||||| |||||||||| |||| |||||| || ||||||||||||||||||| |||||||| |||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcattttt-gttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttt 4636130  T
Q  341 aga 343  Q
    |||    
T  4636131 aga 4636133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 2733512 - 2733416
Alignment:
Q  171 ataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaa 267  Q
    |||| ||| ||||||||||| | |||||||||| ||||||||||||| || ||| | | ||||| ||||||||||| ||||||||||||||||||||    
T  2733512 ataaattttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||| | |||||| || |   || || ||||||||||| |||||||||  ||| |||| |||||| ||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatca-tttttgtt 52269193  T
Q  283 gtatttttcgtcctac 298  Q
    | | ||||||||||||    
T  52269192 gcacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaa 256  Q
    |||||||||| |||||||||||||||||||| |||||||||| | | ||| | ||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 47827108 - 47827036
Alignment:
Q  206 tgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||||||||||||| | | ||| | ||||||||||| |||||||||  |||||| |||||||||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcattttt 47827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 17112336 - 17112442
Alignment:
Q  236 cccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgac 334  Q
    ||||||||||| |||| ||||  ||||||||||||||| ||||| ||| ||||||||||||||| || ||||| |  ||||| ||||| ||| ||||||     
T  17112336 cccttttaaaatagaataaaatagtccttcaattatca-tttttattgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgat 17112434  T
Q  335 agttttag 342  Q
    ||||||||    
T  17112435 agttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 11090524 - 11090682
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 11090622  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11090623 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 11090682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 239352 - 239513
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||||||||     
T  239352 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt- 239449  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  239450 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 239513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 1978107 - 1978269
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  1978107 aggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 1978205  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttaga 1978269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 22374319 - 22374481
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||    
T  22374319 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 22374417  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttaga 22374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 176 - 343
Target Start/End: Original strand, 40027135 - 40027301
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt 275  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |    
T  40027135 tttaaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-t 40027233  T
Q  276 ttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40027234 ttttgttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttaga 40027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 173 - 343
Target Start/End: Complemental strand, 40815898 - 40815729
Alignment:
Q  173 aagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatc 272  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||  | ||||||||||| |||||||||||| ||||||||||||    
T  40815898 aagttttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatc 40815799  T
Q  273 attttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40815798 at-ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 40815729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 177 - 343
Target Start/End: Original strand, 26538093 - 26538258
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| || || ||||||||||| |||||||| ||||||||||||||||| ||    
T  26538093 ttaaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatca-tt 26538191  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  26538192 tttgttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttaga 26538258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 43058333 - 43058494
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||| |||||||||||||||| |||||| | ||| ||||| || |||||||| |||||||||||||||||||||||||| ||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatca-tttttg 43058431  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43058432 ttgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 43058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 18451377 - 18451215
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| |||||||||  ||||||||| ||||| |||||    
T  18451377 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatca-ttttt 18451279  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18451278 gttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 18451215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 14432145 - 14432303
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||| | ||||||||||| | |||||||||||||||||| ||||| |||||||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatca-tttttgttg 14432243  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14432244 catttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 14432303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 187 - 343
Target Start/End: Original strand, 3025472 - 3025626
Alignment:
Q  187 attacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtat 286  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| |||||||||||||||||||| ||||| ||||||||| ||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatca-tttttgttgcat 3025570  T
Q  287 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||    
T  3025571 ttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttaga 3025626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 26538625 - 26538462
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||| |||||| ||||||||||||||||||||||||||| ||||    
T  26538625 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcat-tttt 26538527  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||| |  | ||| ||||| ||||||||||||||||||||    
T  26538526 gttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttaga 26538462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 28616613 - 28616775
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| ||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 28616711  T
Q  281 ttgtatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttaga 343  Q
    ||| | ||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||||||||    
T  28616712 ttgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttaga 28616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 7446892 - 7446730
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  7446892 aggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 7446794  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  7446793 gttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 8425902 - 8425744
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||| || ||||||||| |||||||||| | | ||||| ||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcat-ttttgttg 8425804  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttaga 8425744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 322
Target Start/End: Original strand, 20444747 - 20444889
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||| ||||||||||| ||||||||||||||||||| |||||| ||||    
T  20444747 aaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatca-tttt 20444845  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||| | |||||||||||||||||||||||| |||||||||||    
T  20444846 tgttgcagttttcgtcctaccccccattttatcctccaaaaacg 20444889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 18450828 - 18450991
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||| |||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  18450928 t-ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||| |||||||||||||| ||||||| || | | ||||| ||||||||||| |||||||||||||| ||||||||||| ||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-tttt 7446438  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtt 338  Q
    | ||| |||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  7446439 tattgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 40815347 - 40815506
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| | ||||||||||| |||||||||||| ||||||||    
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca-tttttgtt 40815445  T
Q  283 gtatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||||||||||| || | |||||  ||||| ||||| |||||||||||||||||||    
T  40815446 gcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 11091066 - 11090904
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| || ||    
T  11091066 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttatt 11090968  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||||||||||||||| | || ||||| |  ||||| ||||| ||| |||||||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 22374871 - 22374709
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | | ||| | ||||||||||| ||||||||||||||||||||||||||| ||||    
T  22374871 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 22374773  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 35781207 - 35781068
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| | | ||| | ||||||||||| ||||||||||  ||||||||||||||| ||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcat-ttttgt 35781109  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    || ||||||||||||| |||||||||||| |||||||||||    
T  35781108 tgcatttttcgtcctaacccccattttatcctccaaaaacg 35781068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 40027687 - 40027524
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| |||||||||||||| |||||||||||| |||    
T  40027687 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttt 40027589  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||| || |||||| |||||||||    
T  40027588 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 43058878 - 43058717
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| | ||||||||| ||||||||| ||||||||||||||||  ||||    
T  43058878 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca--tttt 43058781  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  43058780 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 28847241 - 28847123
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| | ||||||||| | ||||||||||||||||||||||||| ||||    
T  28847241 aggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcat-tttt 28847143  T
Q  280 gttgtatttttcgtcctacc 299  Q
    |||| |||||||||||||||    
T  28847142 gttgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 180 - 322
Target Start/End: Complemental strand, 20440577 - 20440437
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||| ||||||||||| |||||||||||||| |||| ||||||| ||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcat-tttt 20440479  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| | ||||||||||| |||||| ||||| |||||||||||    
T  20440478 gttgcagttttcgtcctatccccca-tttatcctccaaaaacg 20440437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 322
Target Start/End: Original strand, 35779708 - 35779848
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||| | ||||||||| | | ||||| || |||||||| |||||||||  ||||||||||||||| ||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatca-tttttg 35779806  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||| |||||| ||||||||||||||||||| |||||||||||    
T  35779807 ttgcattttttgtcctaccccccattttatcctccaaaaacg 35779848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 28617161 - 28616998
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||  |||||||||| ||||||||| ||||||||||||||||| |||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcat-ttt 28617063  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| |||||||||| |||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  28617062 tgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcat-ttttgt 239798  T
Q  282 tgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||  ||||||||| |||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  239797 tgcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 1978655 - 1978528
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| | | ||||| ||||||||||| |||||||||| |||||||||||||||| ||||    
T  1978655 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcat-tttt 1978557  T
Q  280 gttgtatttttcgtcctaccccccatttt 308  Q
    |||| |||||| |||||||| || |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||| |||||||||||||||||||| | | ||| |||| |||||||| ||||||||||||| |||||||||||| ||| |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatca-tttgtgttg 8425455  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
     ||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||||||| ||||||||||||||||| ||||||||| | | || || ||||||||||| | |||||||||||||||||||||| | ||||||    
T  3026006 ggcttaattacatttt-ggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattatta-tttttg 3025910  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||| | ||||||||||||||||||    
T  3025909 ttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||| | || |||||||| |||| |||| ||| |||||||||| | ||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattatta-tttttgtt 14432586  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||| ||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  14432585 gcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 322
Target Start/End: Original strand, 8972239 - 8972377
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||| | ||||||| | | ||| | |||||| |||| |||||||||  ||| ||||||||||| ||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatca-tttttgtt 8972337  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    | ||||||||| |||||||| ||||||| |||||||||||    
T  8972338 gcatttttcgttctaccccctattttatcctccaaaaacg 8972377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 322
Target Start/End: Original strand, 15551501 - 15551639
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||  ||||||||| | | ||| | || |||||||| | |||||||  |||||||| |||||| ||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatca-tttttgtt 15551599  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    | ||||||||||| |||| ||||||||| |||||||||||    
T  15551600 gcatttttcgtccaaccctccattttatcctccaaaaacg 15551639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 15552596 - 15552458
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||| |  ||||||||||||||||||| | |  |||  ||||||||||| |||||||||  ||| |||||||||||||||| |||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatccg-cccttttaaaacagaacaaaattgtcattcaattatcattttt-gtt 15552499  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgt 323  Q
    |||||||||||||||||| |||||||   ||||||||||||    
T  15552498 gtatttttcgtcctaccctccattttgccctccaaaaacgt 15552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 16195125 - 16195049
Alignment:
Q  106 ttattaaaacggtagcagtagttgttctta--gcataaccatgttttgagaacagtgaacttgtgtaataagtttaa 180  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||  |||||||||||||||||||||    
T  16195125 ttattaaaacggtagcagtagttgttcttataggataaccatgttttgagaacaaggaacttgtgtaataagtttaa 16195049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 177 - 343
Target Start/End: Original strand, 33109680 - 33109845
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||| | ||||||||| |||||||||||||||||||||||||| ||    
T  33109680 ttaagacttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatca-tt 33109778  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33109779 tttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 33109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 23494445 - 23494604
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||| ||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatca-tttttatt 23494543  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23494544 gcatttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttaga 23494604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 46193948 - 46193789
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttatt 46193850  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46193849 gcatttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttaga 46193789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 25937669 - 25937831
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  25937669 aggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 25937767  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  25937768 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttaga 25937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 183 - 341
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||| | |||||||| ||||||||||||||| ||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatca-tttttgtt 4219657  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 341  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4219658 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 38962362 - 38962203
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||| ||||  ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgtt 38962264  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  38962263 gcatttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttaga 38962203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 25447782 - 25447620
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  25447782 aggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-tttt 25447684  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttaga 25447620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 11153692 - 11153531
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||| ||||||||||||||| |||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcat-ttttg 11153594  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  11153593 ttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttaga 11153531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 12234328 - 12234488
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||| ||||||||| || |||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  12234328 aggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca-ttttt 12234426  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 341  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  12234427 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 15523782 - 15523618
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||| ||| ||||| ||||||||||| | ||||||| |||||||||| ||||| |||    
T  15523782 taaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatca-ttt 15523684  T
Q  278 ttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15523683 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttaga 15523618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 22434718 - 22434562
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||| ||| |||||||||||||| ||||||||||| |||||||||    
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatca-tttttgttg 22434621  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  22434620 catttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaga 22434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 22170483 - 22170321
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||| | | ||||| || |||||||| | |||||||||||| ||||||||||||||||    
T  22170483 aaggcttaattacacttttggtcctcgtgttttgacctactgacgaaatt-gtcctgcctttttaaaacaaaacaaaacggtcattcaattatcattttt 22170385  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22170384 -gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 22170321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 51020796 - 51020958
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| ||||| |||||||||  | |||| | ||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||     
T  51020796 aggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcattttt- 51020894  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51020895 gttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttaga 51020958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 54995170  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  54995171 catttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 22434277  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  22434278 ttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 48526195 - 48526356
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||| ||||||||||| |||||||| || ||| |  || ||||||||||| |||||||||||||||||||||||||| |||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 48526293  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  48526294 gttgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttaga 48526356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 54995609 - 54995452
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||  || | ||||||||||| |||||||||||||||||||| |||||  ||||||||    
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca--ttttgttg 54995512  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||||||||| |||||||||||||||| ||||||| | |||||||| |||||||||    
T  54995511 catttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttaga 54995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 46193405 - 46193567
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatca-tttttg 46193503  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||    
T  46193504 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 46193567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 15523234 - 15523395
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||    
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
     ||| ||||||||||||||| || ||||| |  ||| | ||||| ||||||||||||||||||    
T  15523334 -ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 25447345  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  25447346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 2118842 - 2118680
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| |||||||| |||||||||||||| |||| || ||| |||||| |||||||||| | |||||||||||| |||||||||||| |||    
T  2118842 aaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcat-ttt 2118744  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||    
T  2118743 tgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaataatagttttaga 2118680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 171 - 342
Target Start/End: Complemental strand, 45082979 - 45082808
Alignment:
Q  171 ataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaatta 270  Q
    |||| |||| |||||||||||| ||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||    
T  45082979 ataattttatggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatta 45082880  T
Q  271 tcattttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||||| ||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  45082879 tcat-ttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 23494989 - 23494872
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  23494989 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 23494891  T
Q  280 gttgtatttttcgtcctac 298  Q
    |||| ||||||||||||||    
T  23494890 gttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 20471057 - 20470895
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| ||| | ||||||||||| |||||||||||||| |||||||||||| ||||    
T  20471057 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat-tttt 20470959  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  20470958 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 45082435 - 45082591
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||  |||||||| ||||||||||| |||||||||| ||| ||  | ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacga-actggttttgcccttttaaaatagaacaaaacggtccttcaattatca-tttttgttg 45082532  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  45082533 catttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttaga 45082591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||  || | ||||||||||| ||||||||||||||||||||||||||| |||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 12234776  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||||||||| || ||||| |  | ||| ||| | |||||||||||||||||||    
T  12234775 ttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 11153144 - 11153307
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||| | ||||||||||||||||||||||||||||| | | | ||| | ||||||||||| |||| ||||||||||||||||||||| ||||    
T  11153144 aaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatca-tttt 11153242  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  | ||| ||||| |||||||||||||||||||    
T  11153243 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 44892692 - 44892553
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| | | || || || |||||||| |||||||||| ||| ||||||||| |||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattat-attttttgt 44892594  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    || |||||||||||||||| ||||||||| |||||||||||    
T  44892593 tgcatttttcgtcctaccctccattttatcctccaaaaacg 44892553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 48526728 - 48526565
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||| | |||||||||||||||||||| |||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||||  |||    
T  48526728 aaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-cttt 48526630  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  48526629 tgttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||  |||| | ||||||||| ||||||||| |||| |||||||||||| ||||||||    
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcat-ttttgttg 4220003  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| || ||||| |  || |||||||| |||||||| ||||||||||    
T  4220002 catttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 25938218 - 25938090
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||| |||||||||||||||||||| | | ||||| ||||||||||| |||||||||| |||||||||||||||| |||    
T  25938218 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcat-ttt 25938120  T
Q  279 tgttgtatttttcgtcctaccccccatttt 308  Q
    ||||| |||||| |||||||| || |||||    
T  25938119 tgttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 33110010 - 33109883
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| | | ||||| ||||||||||| | ||||||||||||||||||||||||| ||||    
T  33110010 aggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcat-tttt 33109912  T
Q  280 gttgtatttttcgtcctaccccccatttt 308  Q
    |||| ||||||||||||||| || |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 51021341 - 51021180
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| | | ||||| ||||||||||| | ||||||||||||||| ||||||||  ||||    
T  51021341 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca--tttt 51021244  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| || ||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 12503913 - 12503820
Alignment:
Q  249 gaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcattttt-gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttaga 12503820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 18751597 - 18751760
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  | ||| ||| | ||||||||||| |||||||||||||||||||| ||||| ||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatca-tttt 18751695  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||| ||| || ||||| |  ||||| ||||| ||| ||||| |||||||||    
T  18751696 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 2118295 - 2118419
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||||| |||||||||||||||||||| | | ||||| ||||||||||| | |||||||  ||||||||||||||| ||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatca-tttttgtt 2118393  T
Q  283 gtatttttcgtcctaccccccatttt 308  Q
    | ||||||||||||||| || |||||    
T  2118394 gcatttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 20958403 - 20958266
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| |||| |||||||| ||||||||||||||||| | | ||||| ||||||||||| ||||||||   |||||||||||||||| ||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcat-ttttgt 20958305  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    || |||||| |||||| |||||||||||| |||||||||||    
T  20958304 tgcattttt-gtccta-cccccattttatcctccaaaaacg 20958266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||| |  |||||||||| ||||||||| |||| ||||| ||||| ||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatca-tttttgtt 18763965  T
Q  283 gtatttttcgtcct 296  Q
    | ||||||||||||    
T  18763964 gcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 188 - 320
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  188 ttacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatt 287  Q
    |||||||||||||||||| |||||||| ||||||||| | | ||| ||| ||||||||| | |||||||  |||||||||||||||  |||||||| |||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatca-attttgttgcatt 20957294  T
Q  288 tttcgtcctaccccccattttattctccaaaaa 320  Q
    ||||||| ||| ||||||||||||||| |||||    
T  20957295 tttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 318
Target Start/End: Original strand, 16690934 - 16691072
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| |||||||||||||||||||| ||||||||  |||||||||| | | ||||| ||  ||||||| | |||||||   |||||||||||||| ||||    
T  16690934 aaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatca-tttt 16691032  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaa 318  Q
    ||||| |||||||||||||||||| ||||||| |||||||    
T  16691033 tgttgcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaa-aaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| || || | ||||||| |||| |||||||||||| ||||||||||| |||||    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatca-ttttt 35363048  T
Q  280 gttgtatttttcgtcctacc 299  Q
    |||| ||||||||| |||||    
T  35363047 gttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 43243807 - 43243686
Alignment:
Q  199 gtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctac 298  Q
    |||||||||||||||||||||||||| | | ||| | ||||||||||| |||||||||  || ||||||||||||| |||||||| |||||| ||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcat-ttttgttgcattttttgtccta- 43243710  T
Q  299 cccccattttattctccaaaaacg 322  Q
    |||||||||||| |||||||||||    
T  43243709 cccccattttatcctccaaaaacg 43243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 48293593 - 48293734
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| | |  ||||  |  ||||||| | |||||||  || |||||||||||||||||     
T  48293593 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt- 48293691  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| ||||||| |||| ||| |||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacg 48293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 44890518 - 44890657
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| |||||||||| |||||||| |||| |||||| | | ||| | ||||||||||| |||||||||   ||||| |||||| |||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattat-attttttgt 44890616  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    || ||||||| || ||||||||||||||| ||| |||||||    
T  44890617 tgcatttttcatcataccccccattttatcctcaaaaaacg 44890657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  199 gtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctac 298  Q
    |||||||||||||||||||||||||| | | ||| | || |||||||| |||||||||  || ||||||||||   ||||||||| ||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattata--tttttgttgcatttttcgtcctac 43281220  T
Q  299 cccccattttattctccaaaaa 320  Q
    |||||||||||| ||| |||||    
T  43281219 cccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 48295088 - 48294947
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    ||||||||||||||||||||| ||||||||||  |||||||||| | | ||| | ||  ||||||| | |||||||  ||| ||||||||||| ||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatca-tttttg 48294990  T
Q  281 ttgtattttt-cgtcctaccccccattttattctccaaaaacg 322  Q
    ||| |||||| ||||||||||||||||||||  ||||||||||    
T  48294989 ttgcatttttccgtcctaccccccattttatcttccaaaaacg 48294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 48713888 - 48713751
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||  | |||||||||| ||||||||| || | | ||| | | ||||||||| |||||||||  |||||||||||||||||||| ||||    
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt-gttg 48713790  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacg 322  Q
     |||||||||||| ||| ||||||||| |||||||||||    
T  48713789 catttttcgtcctcccctccattttatcctccaaaaacg 48713751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  198 ggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtccta 297  Q
    ||||||||||||||| | ||||||||| |||  |||  || |||||||| |||||||||  ||||||||||||||| ||||||||| |||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatca-tttttgttgcatttttcgtccta 12503551  T
Q  298 ccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    || || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  12503552 cctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 48708294 - 48708431
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||  |||||||||||||  ||||| | |  |||| ||||||||||| | |||||||| ||||||||||||||| |||||    
T  48708294 aggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatca-ttttt 48708392  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaa 318  Q
    |||| |||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 322
Target Start/End: Original strand, 43242323 - 43242410
Alignment:
Q  234 tacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||  ||||||||||    
T  43242323 tacctttttaaaacagaacaaaacggtcattcaattatcatttttt-ttgcatttttcgtcctacctccaattttatcatccaaaaacg 43242410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 10258435 - 10258306
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| || | | ||||| ||||||||||| |||  ||||  ||  ||||||||||| |||    
T  10258435 taaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatca-ttt 10258337  T
Q  278 ttgttgtatttttcgtcctaccccccatttt 308  Q
    |||||| | |||| ||| ||||||| |||||    
T  10258336 ttgttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaa 251  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||  |||| ||||||||||| ||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 318
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||| |||  |||||||| ||||||||||| | | |||||  ||| || ||| | |||||||  |||||| |||||| | ||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcct-gcctctttaaacataacaaaattgtcctttaattatta-tttttg 16691519  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaa 318  Q
    ||| |||||||||| |||| |||||||||| |||||||    
T  16691518 ttgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 18752038 - 18751986
Alignment:
Q  291 cgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||||||| ||||||||||||||||| | |||||||| |||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttaga 18751986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 44220861 - 44220782
Alignment:
Q  242 taaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||| |||||||||  |||||||| ||||||||||| |||  ||||||||| |||||||  ||||||| |||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcattttt-gtttcatttttcgttctacccctaattttatcctccaaaaacg 44220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 55677509 - 55677439
Alignment:
Q  176 tttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacc-cttttaaa 245  Q
    ||||||||||||||||| |||||||||| || ||||| || |||||||| | | |||||||| ||||||||    
T  55677509 tttaaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaa 55677439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 17504078 - 17504134
Alignment:
Q  287 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||| || |||||   ||||| ||||||||||||||||||||||||||    
T  17504078 ttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttaga 17504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 37786765 - 37786928
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| | |||||||||||||||||||||||| ||||    
T  37786765 aaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatca-tttt 37786863  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37786864 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 37786928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 19830423 - 19830581
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 19830521  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19830522 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 19830581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 19590525 - 19590686
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttg 19590623  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  19590624 ttgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttaga 19590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 38858641 - 38858804
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||| | ||||||||| |||||||||||||| ||||||||||| ||||    
T  38858641 aaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatca-tttt 38858739  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38858740 tgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 38858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 32005159 - 32004998
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||| ||| ||| | ||||||||||| ||||||||||||||||| ||||||||| |||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcat-ttttg 32005061  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  32005060 ttgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttaga 32004998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 2659386 - 2659224
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||| ||||||||||| ||| || ||| ||| | ||||||||||| |||||||||||||| |||||||||||| ||||    
T  2659386 aggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcat-tttt 2659288  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2659287 gttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 2659224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 34534337 - 34534175
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||| |||  |||| ||| ||||||| ||||||||||||||||||||||||||| ||||    
T  34534337 aggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcat-tttt 34534239  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttaga 34534175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 35289447 - 35289285
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||     
T  35289447 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttg 35289349  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||| ||||||||||||||||||| ||||||| |||||||| | |||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttaga 35289285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 23953268 - 23953113
Alignment:
Q  187 attacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtat 286  Q
    ||||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||| ||||||||||||||||||||||||||| |||||||| ||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcat-ttttgttgcat 23953170  T
Q  287 ttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  23953169 ttttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttaga 23953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 29100398 - 29100235
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| |||||||||||||||||||| |||||||| | | | ||||| ||||||||||| |||||||||||||| |||||||||||| |||    
T  29100398 aaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-ttt 29100300  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  29100299 tgttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 29100235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 4641428 - 4641601
Alignment:
Q  169 taataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaat 268  Q
    |||||| || |||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| | ||||| ||| | |||||||||||| ||||||    
T  4641428 taataaattcaaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaat 4641527  T
Q  269 tatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  4641528 tatca-tttttgttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttaga 4641601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 19591071 - 19590909
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  19591071 aggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 19590973  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  19590972 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 2658838 - 2659000
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||||    
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatca-ttttt 2658936  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||||||| |||| || ||||| |  ||||||||||| ||||||||| |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 38859187 - 38859025
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | | ||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  38859187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcat-tttt 38859089  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  38859088 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 4478242 - 4478084
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    |||| |||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||| |||| || |  |||||||||||||||| ||||||||    
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcat-ttttgttg 4478144  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||| || ||| |||||||||||||||||||| |||||||| |||||||||||    
T  4478143 catttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttaga 4478084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 193 - 342
Target Start/End: Original strand, 29099862 - 29100011
Alignment:
Q  193 tttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcg 292  Q
    |||||||||||||||||||||||||||||||| |||  |||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  29099862 tttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttgcatttttcg 29099960  T
Q  293 tcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||||| || ||||| |  | ||| ||||||||| |||||||||||||||    
T  29099961 tcctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 32004613 - 32004774
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | |  |||| ||||||||||| ||||||||| |||||||||||||||| |||||    
T  32004613 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatca-ttttt 32004711  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
    |||| |||||||| |||||| || ||||| |  ||||| ||||| ||||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 38160950 - 38161091
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| | || |||| ||||||||||| |||||||||  ||||||||||||| | |||||    
T  38160950 aggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattatta-ttttt 38161048  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| |||||||||||||| ||||||||||| |||||||||||    
T  38161049 gttgcatttttcgtcctactccccattttatcctccaaaaacg 38161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 340
Target Start/End: Complemental strand, 37787313 - 37787153
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| | ||||||||  ||||||||||||| ||||||||||||| ||||    
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcat-tttt 37787215  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttt 340  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||    
T  37787214 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 28583438 - 28583577
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| | || || ||||||||||| | || ||||| ||||||||||||||| |||||    
T  28583438 aggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatca-ttttt 28583536  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaa 320  Q
     ||| |||||||||||||||||||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 34533790 - 34533952
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | | ||||||||| |||| |||| |||| ||||||||||| |||||    
T  34533790 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatca-ttttt 34533888  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||| ||||||||| || ||||| |  ||||||||||| |||||||||||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 181 - 298
Target Start/End: Original strand, 35288903 - 35289019
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||| |||| ||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-tttttg 35289001  T
Q  281 ttgtatttttcgtcctac 298  Q
    ||| ||||||||||||||    
T  35289002 ttgcatttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 19830966 - 19830804
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||  |||||||||| | ||||||||||| ||||||||||||| |||    
T  19830966 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcat-ttt 19830868  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| |||||| |||||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  19830867 tgttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 28584466 - 28584327
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| |||| ||||||||| ||||||||| |||||| | | ||| |  |||||||||| |||||||||  |||||||||||||||||||| ||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcattttt-gt 28584368  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  28584367 tgtatttttcgtcttaccccccattttatcctccaaaaacg 28584327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 342
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||||||||||||   ||| |||||  |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 4641888  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     || |||||||||||  || ||||| |  ||| | ||||| |||||||||||||||||||    
T  4641887 catatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 23952729 - 23952848
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcc-tactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||| | | ||| | ||||||||||| |||||||||||||||||||||||||| ||||    
T  23952729 aggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 23952827  T
Q  279 tgttgtatttttcgtcctacc 299  Q
     |||| |||||||||||||||    
T  23952828 ggttgcatttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 4887749 - 4887824
Alignment:
Q  29 acaactattgattgatttgagagcaagaaacataagtagtaactagtttaattaacataacaggaaataacgtaatctt 107  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  4887749 acaactattgattgatttgagaacaagaaacataagta---actagtttaattaacataacaggaaataacgtaatctt 4887824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 6e-62; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 15828188 - 15828025
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| | ||||||||||||||||||||||||| |||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcat-ttt 15828090  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  15828089 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 15828025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 18257136 - 18257298
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  18257136 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 18257234  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttaga 18257298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 20741099 - 20741261
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||| ||||| |||||    
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatca-ttttt 20741197  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 20741261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 2319671 - 2319832
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||    
T  2319671 aggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 2319769  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  2319770 gttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 10900475 - 10900314
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||||| |||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 10900377  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10900376 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 10900314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 11277127 - 11276966
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcat-ttttg 11277029  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11277028 ttgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttaga 11276966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 182 - 343
Target Start/End: Complemental strand, 31470860 - 31470700
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| |||||||||| ||||||| |||||||||||| ||| || || ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgt 31470762  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  31470761 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttaga 31470700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 1149977 - 1149815
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||| ||||||||| || ||| ||| | ||||||||||| ||||||||||||||||||||||| || ||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattacca-tttttg 1149879  T
Q  281 ttgtatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  1149878 ttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttaga 1149815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 12935703 - 12935541
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| || || ||||| ||||||||||||||||||||||||||| ||||    
T  12935703 aggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcat-tttt 12935605  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||  |||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttaga 12935541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 169 - 343
Target Start/End: Original strand, 11444975 - 11445148
Alignment:
Q  169 taataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaat 268  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||  || ||||| ||| ||||||| |||| |||| |||||||||||    
T  11444975 taataaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaat 11445074  T
Q  269 tatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||||    
T  11445075 tatca-tttttgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttaga 11445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 12935156 - 12935318
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  12935156 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 12935254  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  12935255 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 182 - 341
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||| | |||||||||||||||||||| |||||||||| |||  |||| ||||||||||| | |||||||| |||||||||||||||| ||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcat-ttttgt 18505365  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 341  Q
    || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18505364 tgcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 28472636 - 28472797
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| | | ||||| || |||||||| ||||||||| |||| ||||||||||| |||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatca-ttttt 28472734  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  28472735 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaga 28472797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 29859825 - 29859986
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| | | ||||| || |||||||| ||||||||| |||| ||||||||||| |||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatca-ttttt 29859923  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  29859924 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaga 29859986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 2322760 - 2322603
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||||| | || |||||||| ||||||||||||||||||||||||||| ||||||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 2322662  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||    
T  2322661 catttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttaga 2322603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 23073997 - 23074149
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||          
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatc------ 23074090  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
          |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  23074091 ------atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 23074149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 10899942 - 10900101
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 10900040  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||||||||||| || ||||| |  ||||| ||||| ||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 10900101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 11445533 - 11445371
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||    
T  11445533 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat-tttt 11445435  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  11445434 gttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 22219899 - 22219737
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  22219899 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 22219801  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||| ||||| || ||||| |  ||||| ||||  |||||||||||||||||||    
T  22219800 gttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 23075674 - 23075512
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||||| ||||    
T  23075674 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 23075576  T
Q  280 gttgtatttttcgtcctacccccca-ttttattctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||| ||||| || | |||||  ||||||||| | |||||||||||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 20741651 - 20741485
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatt--t 276  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||  |||| ||||||||||| ||||||||||||||||||||||||||||  |    
T  20741651 aaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 20741552  T
Q  277 tttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  20741551 ttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 4811372 - 4811533
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||  || |||||| |||||||||| ||| ||| | ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatca-tttttg 4811470  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||  |||||||||| |||||||||||||||||| |||||||| ||| |||| |||||||||||    
T  4811471 tttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttaga 4811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||||| |||||||||||| ||||||||     
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatca-tttttgttt 18505020  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  18505021 catttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 18257682 - 18257521
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||| | ||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||| | ||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatta-tttttg 18257584  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||  ||||||||||||||| |  |||||    ||||| | |||||||||||||||||||||||    
T  18257583 ttacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttag 18257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 342
Target Start/End: Original strand, 31470311 - 31470476
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||| | | ||||||||| |||||||||| ||| ||||||||| | ||    
T  31470311 ttaaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattatta-tt 31470409  T
Q  277 tttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  31470410 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 11276588 - 11276751
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||||||||  ||| |||| |||||||||| ||||||| || |||  |||||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  11276588 aaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtca-tttt 11276686  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||  ||||||||||||||| || ||||| |  ||||||||||| |||||||||||||||||||    
T  11276687 tgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 11276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 322
Target Start/End: Original strand, 29033436 - 29033575
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| | | ||||| ||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatca-tttttgtt 29033534  T
Q  283 gtatttttcgtcctaccccccattttatt-ctccaaaaacg 322  Q
    | |  |||| |||||||||||||||| || |||||||||||    
T  29033535 gcacatttcatcctaccccccatttttttcctccaaaaacg 29033575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 269
Target Start/End: Original strand, 1149464 - 1149553
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaatt 269  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  1149464 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 178 - 318
Target Start/End: Complemental strand, 3835274 - 3835135
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||| ||||||||| |||||||||  |||||||| ||||||||||| | | ||||| ||  ||||||| |||||||||  |||||| ||||||||| ||    
T  3835274 taaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcat-tt 3835176  T
Q  278 ttgttgtatttttcgtcctaccccccattttattctccaaa 318  Q
    |||| | |||||||||||||||||||||||||| |||||||    
T  3835175 ttgtggcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaa--acggtccttcaattatcatttttt 279  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| ||| || ||  |||||||||| | ||||||  |||||||||||| ||||| |||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatca-ttttt 15827737  T
Q  280 gttgtatttttcgtcctaccccccatttt 308  Q
    |||| ||||||||||||||| || |||||    
T  15827738 gttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 322
Target Start/End: Complemental strand, 29035180 - 29035042
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||| ||||||||||||| |||||||||||| | | ||  | ||||||||||| |||||||||  |||||| | |||||| ||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatca-tttttgtt 29035082  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    | ||||||||||| |||| ||||||| | |||||||||||    
T  29035081 gcatttttcgtcccaccctccattttttcctccaaaaacg 29035042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 18296144 - 18296284
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | |||| |||||||||||||| | ||||||| | | |  |  | ||||||||||| |||||||||| |||||||| |||||| |||||    
T  18296144 aggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatca-ttttt 18296242  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| ||||||||||||| |||||||||||| |||||||||||    
T  18296243 gttgcatttttcgtccta-cccccattttatcctccaaaaacg 18296284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||| | ||||| |||||||||||||||||||||| || |||  || | |  |||||||| ||||||||||||||||||||||||||| |||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcat-ttttg 4811703  T
Q  281 ttgtatttttcgtcctaccccccatttt 308  Q
    ||| ||||||| || |||| || |||||    
T  4811702 ttgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 4792 - 4954
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||    
T  4792 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 4890  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  4891 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 4954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||| ||| |  |||||||||| |||| ||||||||  |||||||||||| |||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcat-ttttgtt 5236  T
Q  283 gtatttttcgtcct 296  Q
    | ||||||||||||    
T  5235 gcatttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 19176836 - 19176674
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  19176836 aggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 19176738  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  19176737 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttaga 19176674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 41681133 - 41681292
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  41681133 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 41681231  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 341  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  41681232 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 12571862 - 12572025
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  12571862 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatca-ttttt 12571960  T
Q  280 gttgtatttttcgtcct-accccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12571961 gttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttaga 12572025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 31133219 - 31133381
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||  ||||||||||| | |||||||| ||||||||| ||||||||||     
T  31133219 aggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt- 31133317  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 31133381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 9930204 - 9930041
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||| ||||| ||||    
T  9930204 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatca-tttt 9930106  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  9930105 tgttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttaga 9930041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 11656454 - 11656617
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | |||||||||||  |||||||||||||||||||||| || |||||    
T  11656454 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattacca-ttttt 11656552  T
Q  280 gttgtatttttcgtcctaccccccattttattctcc-aaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  11656553 gttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttaga 11656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 185 - 343
Target Start/End: Original strand, 13224645 - 13224801
Alignment:
Q  185 taattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgt 284  Q
    |||||||| |||||||| |||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||||  ||||||||||||||||||| ||||     
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcattttt-gttga 13224742  T
Q  285 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13224743 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 13224801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 33328156 - 33328319
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||  || | ||||||||||| |||||||||||||||||||| ||||| ||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatca-tttt 33328254  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  33328255 tgttgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttaga 33328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 44831791 - 44831629
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||| | ||||||||| |||||||||||||  |||||||||||| ||||    
T  44831791 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcat-tttt 44831693  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  44831692 gttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttaga 44831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 19176289 - 19176451
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  19176289 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 19176387  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| ||||||    
T  19176388 gttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 13225186 - 13225023
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||||||||||||| |||    
T  13225186 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcat-ttt 13225088  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  13225087 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 171 - 342
Target Start/End: Original strand, 44831237 - 44831408
Alignment:
Q  171 ataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaatta 270  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| | | ||||| ||||||||||| |||||||||||||||||| ||||    
T  44831237 ataattttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccatta 44831336  T
Q  271 tcattttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  44831337 tca-tttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 9178180 - 9178020
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||  || | |||| |||||| |||||||||||||||||||| ||||| ||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatca-tttttg 9178082  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||| || || |||||||||||||||| ||||||| |||||||||||| |||||||    
T  9178081 ttgcatttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttaga 9178020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 41681679 - 41681562
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 41681581  T
Q  281 ttgtatttttcgtcctacc 299  Q
    ||| |||||||||||||||    
T  41681580 ttgcatttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 11657004 - 11656841
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||   |||||||||| ||||||||| ||||||||||||||||| |||    
T  11657004 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcat-ttt 11656906  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  11656905 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 171 - 342
Target Start/End: Complemental strand, 12572406 - 12572235
Alignment:
Q  171 ataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaatta 270  Q
    |||| |||| || ||||||||| |||||||||||||||||||| |||||||||| ||||||| | | ||||||||| |||||||||||||||||||||||    
T  12572406 ataaatttatggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaatta 12572307  T
Q  271 tcattttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||  |||||||||    
T  12572306 tcat-ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||  |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 9929010  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| ||  |||| |  ||||| ||||| ||||||||| |||||||||    
T  9929011 catttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 341
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||||| |||||||||||||||||||||||| | |||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatta-tttttgt 31133666  T
Q  282 tgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagtttta 341  Q
    || |||||||||| |||| || ||||| |  ||||| ||| | ||||||||||| ||||||    
T  31133665 tgcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||| | |||||||||||||||||| |||||||||||| ||||||| | | ||||||||| | ||||||||||||||||||||||||| |||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcat-ttttgtt 33328585  T
Q  283 gtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | ||||||||||| ||| |||||||| |  ||||| ||||| ||||||||| |||||||||    
T  33328584 gcatttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 34541094 - 34540967
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | ||||||||| | ||||||| ||||||||||||||||| ||||    
T  34541094 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcat-tttt 34540996  T
Q  280 gttgtatttttcgtcctaccccccatttt 308  Q
    |||| ||||||||||||||| || |||||    
T  34540995 gttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 33742921 - 33743082
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||| ||||| |||||||| ||||||||||| |||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatca-ttttt 33743018  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    | || ||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  33743019 gatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 33743406 - 33743303
Alignment:
Q  239 ttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtt 338  Q
    |||||||| |||||||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  33743406 ttttaaaacagaacaaaacggtttttcaattatcattttt-gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagtt 33743308  T
Q  339 ttaga 343  Q
    |||||    
T  33743307 ttaga 33743303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 4630328 - 4630176
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||| || ||||||||||| |||||||||| | | ||||| |  |||||||| |||| | |||||||||||||||||       |||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat-------tgttg 4630236  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4630235 catttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttaga 4630176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 11337068 - 11336970
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||| | | ||||  ||||||||||| |||| ||||||||| ||||||||||||||||    
T  11337068 aggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 180 - 336
Target Start/End: Original strand, 4629796 - 4629952
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||||||| || ||||  | ||||||||||||| || |||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  4629796 aggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatca-ttttt 4629894  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacag 336  Q
     ||| |||||||||| |||| || ||||| |  ||||| ||||| | |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 320
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    |||||||||||||| ||||||||||||||  |||||||||| | | ||| | ||   |||||| ||| |||||  ||||||||| |||||||||| ||||    
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattttt-gttg 10918227  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaa 320  Q
     ||||||| || ||||||||||||||| |||||||||    
T  10918228 catttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 322
Target Start/End: Complemental strand, 8074098 - 8073957
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||| ||| | |||||||||||||||||||||||| |||||| | |  || |  |||||||||| |||||||||   ||||||||||||||  |||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca--ttt 8074001  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||| ||||| ||||  | |||||||||||  |||||||||||    
T  8074000 tgttgcattttacgtcaaaacccccattttaccctccaaaaacg 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 43958264 - 43958325
Alignment:
Q  260 tccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||    
T  43958264 tccttcaattatcattttt-gttgcatttttcgtcctaccctctattttattctccaaaaacg 43958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 10919748 - 10919691
Alignment:
Q  164 ttgtgtaataagtttaaggcttaattacatttttggtcctcgtgttttggcctactca 221  Q
    |||| ||||||  |||||||||||||| | ||||||||||||||||||| ||||||||    
T  10919748 ttgtttaataaaattaaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 9177666 - 9177700
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggc 214  Q
    ||||||||||||| |||||||||||||||||||||    
T  9177666 aggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 9177725 - 9177793
Alignment:
Q  275 tttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||||||| ||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177725 tttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 31779198 - 31779036
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  31779198 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttt 31779100  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttaga 31779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 39556122 - 39555961
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||| |    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca-ttttcg 39556024  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39556023 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 39555961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 20840559 - 20840721
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||| |||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatca-ttttt 20840657  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  20840658 gttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttaga 20840721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 5136983 - 5137141
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||||| |||||||| | | ||| | ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 5137081  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5137082 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 5137141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 184 - 343
Target Start/End: Original strand, 41046703 - 41046861
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||||||| | |||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-tttttgttg 41046801  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41046802 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 41046861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 32535508 - 32535343
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcat----tt 276  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||    ||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  32535408 tttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttaga 32535343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 180 - 337
Target Start/End: Original strand, 48452988 - 48453144
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    |||||| |||||| |||||||| |||||||||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||| |||||    
T  48452988 aggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-ttttt 48453086  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagt 337  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48453087 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 37726927 - 37727090
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||||||||||||| || || |||| ||| || || ||||||||||| | |||||||||||||||||||||||||||||    
T  37726927 aaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcattttt 37727026  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37727027 -gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 37727090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 24301102 - 24300940
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | | ||||| || |||||||| | |||||||||||||||| | ||||||||||     
T  24301102 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcattttt- 24301004  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24301003 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 24300940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 17465040 - 17464875
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||| |||  |||||||||||| ||||||||||||||||||||||||||| ||    
T  17465040 taaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcat-tt 17464942  T
Q  278 ttgttgta-tttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||| | ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  17464941 ttgttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 17464875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 23644460 - 23644623
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| | | ||||| || |||||||| |||||||||| ||||||||||||||| ||||    
T  23644460 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatca-tttt 23644558  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  23644559 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttaga 23644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 43973441 - 43973602
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| | |  |  | ||||||||||| ||||||||||||||||||||||||||||||| |    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcattttt-g 43973539  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  43973540 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttaga 43973602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 27394125 - 27393961
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |   ||||| || |||||||| ||||||||||| ||||||||||||||| ||    
T  27394125 taaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcat-tt 27394027  T
Q  278 ttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||| ||||| | |||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  27394026 ttgttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttaga 27393961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 26837901 - 26837740
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| || || |||||| |||| |||||||||||||| ||||| ||||||||||     
T  26837901 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcattttt- 26837804  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26837803 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 26837740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 25853770 - 25853611
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||| |||||||||||||  |||||||||| ||| ||| |  | |||||||| ||||||||| ||||||||||||||||||||| |||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcattttt-gtt 25853672  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  25853671 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 25853611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 184 - 343
Target Start/End: Complemental strand, 26275108 - 26274951
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||| | |||||| ||| |||||||| ||||||||||| ||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||    
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcat-ttttgttg 26275010  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
      |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  26275009 -ctttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttaga 26274951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 30104481 - 30104642
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| | | ||||| ||||||||||| | || | ||||||||||||||||||| |||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatca-ttttt 30104579  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||    
T  30104580 gttgcatttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttaga 30104642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 43973986 - 43973824
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| || || ||||||||||| |||||||||||||| |||||||||||| ||||    
T  43973986 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcat-tttt 43973888  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| || | ||| ||||| |||||||||||||||||||    
T  43973887 gttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 185 - 331
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  185 taattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgt 284  Q
    |||||||| ||||||||||||||||| |||||||||||||  || ||| | ||||| ||||| ||||||||||||| ||||||||||||| ||||||||     
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcat-ttttgttgc 22425256  T
Q  285 atttttcgtcctaccccccattttattctccaaaaacgtagagaaat 331  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  22425255 atttttcgtcctaccccccattttattctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 177 - 342
Target Start/End: Original strand, 27393657 - 27393822
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| | ||| ||||| || |||||||| |||||||||||||||||||||||||| ||    
T  27393657 ttaaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatca-tt 27393755  T
Q  277 tttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||||| |||||||||||||||||| ||||| |  | ||| ||||| |||||||||||||||||||    
T  27393756 tttgttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| | ||||||||| ||||||||||||||||||||||||||| |||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcat-ttttg 37727377  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  37727376 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 20841108 - 20840945
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||||||||||||||||||||| |||    
T  20841108 aaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcat-ttt 20841010  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  20841009 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 39555576 - 39555739
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||||||||| ||||    
T  39555576 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatca-tttt 39555674  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||| ||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  39555675 tgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 17464490 - 17464652
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||| || ||| ||| ||| | ||||||||||| |||||||||||||||||||||||||| |||||    
T  17464490 aggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca-ttttt 17464588  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||||| |||||||||||||||||    
T  17464589 gttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 31778651 - 31778814
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||| |||||||||||||||||||| ||||||| || ||| ||||| ||||||||||| ||||||||||||||||||  |||||| ||||    
T  31778651 aaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatca-tttt 31778749  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  31778750 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 4275910 - 4275748
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | | ||||||||| ||||||||||||||||| ||||||||| ||||    
T  4275910 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcat-tttt 4275812  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 25612519 - 25612382
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||||||||||||||||| ||||||||||| | | ||||| ||||||||||| |||||||||| ||| || ||||||||| ||||||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcat-ttttgttg 25612421  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacg 322  Q
     |||||||||||||||||||||||||| |||||||||||    
T  25612420 catttttcgtcctaccccccattttatcctccaaaaacg 25612382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | | ||| | ||||||||||| |||||||||||||||||||||||||| ||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatca-tttttg 25853332  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||||| ||||| || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  25853333 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 29801962 - 29801799
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  29801962 aggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat-tttt 29801864  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| ||||||||||| ||| || ||||| |  ||||| ||||| |||||||||||| |||||||    
T  29801863 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttaga 29801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 5137527 - 5137365
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||| || || ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcat-tttt 5137429  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| |||||| |||||| | || ||||| |  ||||| ||||| |||||||||||||||||||    
T  5137428 gttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 342
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||| | ||||||||||||||||||||||||||||||| | | ||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcat-ttttg 23644912  T
Q  281 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| ||||||| ||||||| || ||||| |  ||| |  |||| |||||||||||||||||||    
T  23644911 ttgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 30098311 - 30098147
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||||||||||| ||    
T  30098311 taaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcat-tt 30098213  T
Q  278 ttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||||| ||||||||||||||| || ||||| |  || || ||||| ||||| |||||||||||||    
T  30098212 ttgttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    |||||||||||||||||||| || ||||||||||||||||| | | ||||| |||||||| || | ||| |||||||||||||||||||| |||||||||    
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatca-tttttgttg 26837461  T
Q  284 tatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
     ||||||||||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  26837462 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 32534957 - 32535085
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| | | ||||| || |||||||| |||||||||||||||||||||||||| ||||    
T  32534957 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatca-tttt 32535055  T
Q  279 tgttgtatttttcgtcctaccccccatttt 308  Q
    ||||| ||||||||||||||| || |||||    
T  32535056 tgttgcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 32697244 - 32697105
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||| |||||||||||||||||||| |||||||||||| | |||||   ||||||||||| |||||||||  || ||||||||||||| ||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcat-ttttgt 32697146  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacgt 323  Q
    || ||||||||||||| |||||||||||| ||||||||||||    
T  32697145 tgcatttttcgtccta-cccccattttatcctccaaaaacgt 32697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 26274565 - 26274728
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||||||||| |||| || |||||| |||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  26274565 aaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-tttt 26274663  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| |||||||||| |||| || ||||| |  ||||| ||||| ||  |||||||||||||||    
T  26274664 tgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 22424813 - 22424975
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||| |||||||||  ||||||| |||| ||| || ||  |||||||||| |||||||||||||||||||||||||| |||||    
T  22424813 aggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatca-ttttt 22424911  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  22424912 gttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 29801356 - 29801477
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||| |||||||||||| ||||||| | ||| ||||| ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-tttttg 29801454  T
Q  281 ttgtatttttcgtcctacccccc 303  Q
    ||| |||||||||| ||||||||    
T  29801455 ttgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 50116954 - 50116814
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||| ||||||||||||| | ||||||||| | | ||| | ||||||| ||| |||||||||||||| |||| ||||||| |||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcat-ttttg 50116856  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||| | |||||||||||||||||||||| | |||||||||||    
T  50116855 ttgcaattttcgtcctaccccccattttttcctccaaaaacg 50116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 321
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| | |  || | ||||||| |||| ||||||||  ||||||||||||||| |||||     
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgccctttt-aaaacgaacaaaattgtccttcaattatca-ttttta 23228455  T
Q  281 ttgtatttttcgtcctaccccccattttattctccaaaaac 321  Q
    ||| ||||||||||||||| |||||||||| ||||||||||    
T  23228454 ttgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 24300555 - 24300717
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| |||||||||||||||||| |||||||||||| || |||||| ||| |||||  |||||||||| |||| |||||||| |||||||||||| ||||    
T  24300555 aaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatca-tttt 24300652  T
Q  279 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||||| | ||||||||| ||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  24300653 tgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 180 - 320
Target Start/End: Original strand, 45965937 - 45966076
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||   || |||| | ||||||||| | |||||||  ||||||| ||||||| ||| |    
T  45965937 aggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatca-tttgt 45966035  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaa 320  Q
    |||| ||||||||| ||| |||||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 322
Target Start/End: Complemental strand, 51474880 - 51474738
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||||| | | ||| | ||||||||||| | |||||||  |||||| | ||||||| ||||    
T  51474880 aggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcat-tttt 51474782  T
Q  280 gttgtatttttcgtcctacccccca-ttttattctccaaaaacg 322  Q
    |||| |||||||||||||||||| | |||||| |||||||||||    
T  51474781 gttgcatttttcgtcctacccccaatttttatcctccaaaaacg 51474738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 37220556 - 37220697
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |    || | | ||||||||| |||| ||||  |||||||| |||||||||||     
T  37220556 aggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt- 37220654  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||| | |||||||||||||| ||||||||| |||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacg 37220697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 342
Target Start/End: Complemental strand, 41047218 - 41047083
Alignment:
Q  206 tgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccat 305  Q
    ||||||||||||||||||| ||| || ||  |||||||||| |||| ||||| ||||||||||||||| ||||||||| ||||||||||||||| || ||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatca-tttttgttgcatttttcgtcctacctcctat 41047121  T
Q  306 ttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    ||| |  ||||| ||||| ||||||||| |||||||||    
T  41047120 tttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 25419157 - 25419284
Alignment:
Q  194 ttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtcc-ttcaattatcattttttgttgtatttttcg 292  Q
    |||||||| ||||||||| || ||||||||| | |||| || ||||||||||| |||||||||| |||| ||||||||||||||||| ||| | |||| |    
T  25419157 ttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgcagttttag 25419256  T
Q  293 tcctaccccccattttattctccaaaaacg 322  Q
    ||||  |||||||||||  |||||||||||    
T  25419257 tccttacccccatttta--ctccaaaaacg 25419284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 51473429 - 51473525
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||||| |||||||||||||||||||| ||| |||||| | | ||||| ||||||||||| |||||||||  |||||||  |||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcattttt 51473525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 25420684 - 25420548
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| ||||| || |||| ||||| ||||||||||| | |  ||   ||||||||||| |||| ||||  ||||||||||||| |||||| |||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattattttt-gtt 25420586  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaa 320  Q
    | |||||||||| ||||||||||||||| || ||||||    
T  25420585 gcatttttcgtcataccccccattttatccttcaaaaa 25420548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 267
Target Start/End: Complemental strand, 37222117 - 37222030
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaa 267  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| | | | ||||| || |||||||| ||||||||||  ||||||||    
T  37222117 aggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 310
Target Start/End: Complemental strand, 18010235 - 18010162
Alignment:
Q  236 cccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttat 310  Q
    ||||||||||| |||||||||  ||  |||||||||||||||| |||| |||||||||||| ||| |||||||||    
T  18010235 cccttttaaaacagaacaaaattgttattcaattatcattttt-gttgcatttttcgtcctgccctccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 29801532 - 29801577
Alignment:
Q  298 ccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttaga 29801577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 23227349 - 23227396
Alignment:
Q  275 tttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||||| |||||||||||| | ||||||||||| |||||||||||    
T  23227349 tttttgttgcatttttcgtccttctccccattttatcctccaaaaacg 23227396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 32695706 - 32695746
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacga 224  Q
    ||||||||||||||||||||| | |||||||||||| ||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacga 32695746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 171 - 343
Target Start/End: Original strand, 1657 - 1828
Alignment:
Q  171 ataagtttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaatta 270  Q
    |||||||  ||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| | |||||||||||    
T  1657 ataagttataggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaatta 1756  T
Q  271 tcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1757 tca-tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 2213 - 2051
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| |||||||||||||| |||||||||||| ||||    
T  2213 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-tttt 2115  T
Q  280 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    |||| ||||||||||||||| || ||||| |  ||||| ||||| |||||||||| ||||||||    
T  2114 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 134219 - 134057
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||||| | ||||||||||| ||||||||||| || |||||    
T  134219 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaaca-ttttt 134121  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  134120 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 134057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 183 - 343
Target Start/End: Original strand, 755 - 913
Alignment:
Q  183 cttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgtt 282  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||  |||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttttgtt 852  T
Q  283 gtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  853 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 1286 - 1160
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||| |||||||||||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-ttttg 1188  T
Q  281 ttgtatttttcgtcctaccccccatttt 308  Q
    ||| || |||||||||||| || |||||    
T  1187 ttgcatctttcgtcctacctcctatttt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 4753 - 4591
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||||||||| ||||||||| ||||    
T  4753 aggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcat-tttt 4655  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttaga 4591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  220 cacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccatttt-attctccaaa 318  Q
    ||||| ||| ||||| ||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||||| ||||| || ||||| |  ||| |||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatca-tttttgttgcatttttcgttctacctcctattttcaaactctaaa 4340  T
Q  319 aacgtagagaaatgacagttttag 342  Q
    || | |||||||||||||||||||    
T  4341 aatgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 111; Significance: 5e-56; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 177 - 343
Target Start/End: Original strand, 64298 - 64463
Alignment:
Q  177 ttaaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattt 276  Q
    |||||||||||||||| ||||||||||||||||||| | ||||||||| |||  ||||  |||||||||| |||||||||||||||||||||||||| ||    
T  64298 ttaaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatca-tt 64396  T
Q  277 tttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  64397 tttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttaga 64463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 179 - 297
Target Start/End: Complemental strand, 64852 - 64735
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| ||| ||||  ||||||||||| ||||||||||||||||| ||||||||| |||    
T  64852 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcat-ttt 64754  T
Q  279 tgttgtatttttcgtccta 297  Q
    ||||| |||||||||||||    
T  64753 tgttgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||| ||  | ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcat-ttttgttg 10316  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagtttta 341  Q
     ||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||    
T  10315 catttttcgtccta-cccccattttattctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 9935 - 10029
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||  || | ||||||||| | ||||||||| |||||||||||||||| ||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaatttt 10029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 10640 - 10782
Alignment:
Q  200 tcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctacc 299  Q
    |||||||||||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||||||| ||||| |||| |||| |||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatca-ttttcgttgcatttttcgtcctacc 10738  T
Q  300 ccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    | ||||||||||||||||||| | ||||||||||||||||||||    
T  10739 ctccattttattctccaaaaatgcagagaaatgacagttttaga 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 11168 - 11042
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| ||||||||||| | ||||||||||||||||||||||||| |||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcat-ttttg 11070  T
Q  281 ttgtatttttcgtcctaccccccatttt 308  Q
    ||| ||||||||||||||| || |||||    
T  11069 ttgcatttttcgtcctacctcctatttt 11042  T

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Target: scaffold0176 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 18833 - 18995
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||| |||||| ||||||||||  ||||||||||||||||||| ||| ||| | ||||||||||| | ||||||||||| |||||||||||| ||||    
T  18833 aaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatca-tttt 18931  T
Q  279 tgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||    
T  18932 tgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttaga 18995  T

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Target: scaffold0176; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 19166 - 19067
Alignment:
Q  181 ggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttg 280  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttg 19067  T

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Target: scaffold0027 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 42704 - 42543
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttttt 279  Q
    ||||||||||| | |||||| ||||||||||||| ||||||| || |||  | || ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  42704 aggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat-tttt 42606  T
Q  280 gttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  42605 gtttcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaga 42543  T

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Target: scaffold0027; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 42166 - 42331
Alignment:
Q  178 taaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcatttt 277  Q
    ||||| ||||||||| |||| || |||||||||||| ||| |||||| |||  |||| || |||||||| |||||||||||||| ||||||||||| |||    
T  42166 taaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatca-ttt 42264  T
Q  278 ttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttaga 343  Q
    |||||| |||||| ||| |||| || ||||| |  || || ||||| ||||||||||||||||||||    
T  42265 ttgttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttaga 42331  T

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Target: scaffold1585 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 568 - 707
Alignment:
Q  182 gcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgt 281  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| | |  || | ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatca-tttttgt 666  T
Q  282 tgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    |||||||||||||  ||| ||||||| || |||||||||||    
T  667 tgtatttttcgtctcacctcccatttgatcctccaaaaacg 707  T

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Target: scaffold0157 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 16564 - 16657
Alignment:
Q  249 gaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 343  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcattttt-gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttaga 16657  T

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Target: scaffold0157; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 198 - 342
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  198 ggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtccta 297  Q
    ||||||||||||||| | ||||||||| |||  |||  || |||||||| |||||||||  |||||||||||||||| |||||||| |||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcat-ttttgttgcatttttcgtccta 16926  T
Q  298 ccccccatttt-attctccaaaaacgtagagaaatgacagttttag 342  Q
    || || ||||| |  ||||| ||||| |||||||| ||||||||||    
T  16925 cctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

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Target: scaffold0057 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 184 - 322
Target Start/End: Complemental strand, 62000 - 61863
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttg 283  Q
    ||||||||| ||||| |||||||||||||| |||||||||| | | ||||||||||||||||| |||||||||   || ||||| ||||| ||||||||     
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatca-tttttgtta 61902  T
Q  284 tatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  61901 tatttttcgtcctaccccccattttgtcctccaaaaacg 61863  T

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Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 61027 - 61102
Alignment:
Q  180 aggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaa 255  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||| | |  |||| || |||||||| ||||||||    
T  61027 aggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

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Target: scaffold0113 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 28790 - 28662
Alignment:
Q  179 aaggcttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||| |||||||| |||||||| ||||||||||||||||| |||| ||| ||| | ||||||||||| |||||||||||||| |||||||||||| |||    
T  28790 aaggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcat-ttt 28692  T
Q  279 tgttgtatttttcgtcctaccccccatttt 308  Q
    ||||| | |||||||||| |||||||||||    
T  28691 tgttgcagttttcgtccttccccccatttt 28662  T

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Target: scaffold0076 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 8551 - 8457
Alignment:
Q  184 ttaattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttt 278  Q
    ||||||||| |||||||| || |||||||| ||||| |||| ||| ||||||||||||||||| | | |||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcattttt 8457  T

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Target: scaffold0168 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 7784 - 7693
Alignment:
Q  230 gtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgtatttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||| ||||||||||| |||||||||| ||| |||| ||||||||||| |||| |||||||||||||||||| ||||||| |||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcattttt-gttgcatttttcgtcctaccccctattttatcctccaaaaacg 7693  T

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Target: scaffold1696 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 322
Target Start/End: Original strand, 454 - 588
Alignment:
Q  185 taattacatttttggtcctcgtgttttggcctactcacgagactagtcctacccttttaaaaaagaacaaaacggtccttcaattatcattttttgttgt 284  Q
    |||||||||||| |||| |||||||||||||||||||||| | | ||| |   ||||||||| | |||| ||  ||||||||||||||| |||||||||     
T  454 taattacatttt-ggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatca-tttttgttgc 551  T
Q  285 atttttcgtcctaccccccattttattctccaaaaacg 322  Q
    ||||||||||||| | |||||||||| ||| |||||||    
T  552 atttttcgtccta-cacccattttatcctcaaaaaacg 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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