View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1148_low_6 (Length: 616)

Name: NF1148_low_6
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1148_low_6
NF1148_low_6
[»] chr5 (38 HSPs)
chr5 (30-355)||(8317730-8318043)
chr5 (393-605)||(8318042-8318255)
chr5 (373-503)||(38952243-38952374)
chr5 (372-499)||(17421748-17421875)
chr5 (305-510)||(28747746-28747955)
chr5 (423-513)||(6260978-6261068)
chr5 (414-510)||(15294134-15294230)
chr5 (361-401)||(17209975-17210015)
chr5 (435-498)||(3349402-3349465)
chr5 (319-401)||(4736796-4736879)
chr5 (289-434)||(10470961-10471110)
chr5 (423-510)||(32736365-32736452)
chr5 (372-510)||(12910012-12910150)
chr5 (305-510)||(14369751-14369959)
chr5 (470-510)||(17233264-17233304)
chr5 (319-401)||(30688014-30688100)
chr5 (423-510)||(4738037-4738124)
chr5 (323-510)||(9124704-9124896)
chr5 (319-401)||(33696051-33696136)
chr5 (424-510)||(857996-858082)
chr5 (423-453)||(1797460-1797490)
chr5 (423-513)||(6436528-6436618)
chr5 (372-401)||(3960737-3960766)
chr5 (305-401)||(4737916-4738015)
chr5 (424-453)||(7014573-7014602)
chr5 (372-401)||(15809029-15809058)
chr5 (476-513)||(17232903-17232940)
chr5 (305-503)||(22701741-22701941)
chr5 (305-401)||(25912141-25912240)
chr5 (305-401)||(29302056-29302155)
chr5 (305-401)||(30687866-30687965)
chr5 (305-401)||(37249438-37249537)
chr5 (423-499)||(2695097-2695173)
chr5 (423-459)||(17605082-17605118)
chr5 (373-401)||(22800740-22800768)
chr5 (423-503)||(31752221-31752301)
chr5 (425-453)||(33282303-33282331)
chr5 (361-401)||(37282226-37282266)
[»] scaffold0418 (1 HSPs)
scaffold0418 (372-520)||(5752-5900)
[»] chr2 (36 HSPs)
chr2 (404-537)||(29452941-29453075)
chr2 (476-558)||(43660835-43660918)
chr2 (423-510)||(34082554-34082641)
chr2 (305-510)||(29512074-29512284)
chr2 (423-510)||(768664-768752)
chr2 (423-503)||(23387247-23387327)
chr2 (423-510)||(33739534-33739621)
chr2 (341-462)||(29403980-29404104)
chr2 (305-401)||(13002021-13002120)
chr2 (373-510)||(42850003-42850140)
chr2 (423-558)||(1576591-1576727)
chr2 (319-401)||(39906380-39906466)
chr2 (423-499)||(41528016-41528092)
chr2 (319-401)||(44257468-44257554)
chr2 (435-510)||(8386684-8386759)
chr2 (414-453)||(15554133-15554172)
chr2 (476-515)||(22711176-22711215)
chr2 (361-400)||(45629778-45629817)
chr2 (423-453)||(20939830-20939860)
chr2 (429-558)||(32601329-32601459)
chr2 (423-453)||(39904710-39904740)
chr2 (423-453)||(44257514-44257544)
chr2 (361-398)||(1297691-1297728)
chr2 (305-401)||(1750188-1750287)
chr2 (372-401)||(4293314-4293343)
chr2 (372-401)||(9690268-9690297)
chr2 (372-401)||(17265367-17265396)
chr2 (372-401)||(20939820-20939849)
chr2 (372-401)||(33173566-33173595)
chr2 (372-401)||(39904721-39904750)
chr2 (372-401)||(44542916-44542945)
chr2 (319-401)||(3769464-3769550)
chr2 (373-401)||(6332386-6332414)
chr2 (423-459)||(9690278-9690314)
chr2 (423-503)||(18370226-18370306)
chr2 (423-503)||(29511960-29512040)
[»] chr4 (39 HSPs)
chr4 (423-510)||(14948244-14948331)
chr4 (372-520)||(40496134-40496283)
chr4 (346-503)||(15725221-15725381)
chr4 (319-402)||(5157031-5157118)
chr4 (319-401)||(5046739-5046825)
chr4 (423-499)||(33106034-33106110)
chr4 (423-515)||(38425649-38425741)
chr4 (319-401)||(41172443-41172529)
chr4 (423-510)||(49425762-49425849)
chr4 (305-510)||(6946646-6946849)
chr4 (428-510)||(36955483-36955565)
chr4 (346-510)||(11777498-11777665)
chr4 (346-401)||(6137610-6137668)
chr4 (319-401)||(12584385-12584471)
chr4 (319-401)||(14202969-14203055)
chr4 (311-401)||(578708-578801)
chr4 (374-453)||(41172489-41172568)
chr4 (423-510)||(45875881-45875968)
chr4 (423-453)||(578868-578898)
chr4 (423-453)||(13621423-13621453)
chr4 (423-453)||(14202979-14203009)
chr4 (305-510)||(16553426-16553634)
chr4 (319-399)||(17745181-17745265)
chr4 (423-453)||(30258235-30258265)
chr4 (424-515)||(54742573-54742666)
chr4 (372-401)||(578858-578887)
chr4 (372-401)||(3818834-3818863)
chr4 (372-401)||(10216350-10216379)
chr4 (372-401)||(13211905-13211934)
chr4 (372-401)||(17181040-17181069)
chr4 (372-401)||(21519821-21519850)
chr4 (372-401)||(26958627-26958656)
chr4 (372-401)||(30258225-30258254)
chr4 (372-401)||(48560088-48560117)
chr4 (372-401)||(49970685-49970714)
chr4 (305-401)||(52437537-52437636)
chr4 (319-401)||(18470290-18470376)
chr4 (423-510)||(20458834-20458922)
chr4 (435-515)||(38425556-38425636)
[»] chr8 (39 HSPs)
chr8 (423-558)||(34102941-34103077)
chr8 (305-558)||(10616232-10616489)
chr8 (305-510)||(26042939-26043147)
chr8 (414-515)||(25123644-25123745)
chr8 (423-510)||(2823721-2823808)
chr8 (305-510)||(27545750-27545958)
chr8 (347-502)||(23544832-23544991)
chr8 (423-510)||(26630019-26630106)
chr8 (424-515)||(30633185-30633276)
chr8 (423-510)||(32069012-32069099)
chr8 (319-400)||(41942956-41943041)
chr8 (423-510)||(45299707-45299793)
chr8 (289-453)||(17883986-17884153)
chr8 (373-510)||(25123368-25123505)
chr8 (373-510)||(30207157-30207294)
chr8 (423-510)||(5946905-5946993)
chr8 (319-401)||(9483748-9483834)
chr8 (372-499)||(13269302-13269430)
chr8 (423-510)||(17691205-17691292)
chr8 (423-510)||(39922394-39922481)
chr8 (372-510)||(8258390-8258528)
chr8 (423-453)||(25281059-25281089)
chr8 (476-510)||(36899727-36899761)
chr8 (476-514)||(44873142-44873180)
chr8 (372-401)||(1783101-1783130)
chr8 (305-401)||(3154216-3154315)
chr8 (423-503)||(13468420-13468501)
chr8 (372-401)||(14826360-14826389)
chr8 (372-401)||(19971500-19971529)
chr8 (372-401)||(21021284-21021313)
chr8 (305-401)||(21442080-21442179)
chr8 (372-401)||(21442419-21442448)
chr8 (425-510)||(42556672-42556757)
chr8 (346-391)||(43562175-43562220)
chr8 (372-441)||(44874202-44874271)
chr8 (361-401)||(5642575-5642615)
chr8 (361-401)||(5644516-5644556)
chr8 (414-458)||(17884039-17884083)
chr8 (430-510)||(34969925-34970005)
[»] chr7 (41 HSPs)
chr7 (305-510)||(2509309-2509516)
chr7 (423-510)||(454225-454312)
chr7 (423-510)||(28912203-28912290)
chr7 (372-510)||(18352303-18352442)
chr7 (305-510)||(938895-939103)
chr7 (372-510)||(19069466-19069604)
chr7 (373-510)||(38796811-38796949)
chr7 (361-401)||(2362808-2362848)
chr7 (361-401)||(2633990-2634030)
chr7 (361-392)||(6736555-6736586)
chr7 (374-453)||(12080759-12080838)
chr7 (423-510)||(23740160-23740247)
chr7 (372-510)||(9401644-9401782)
chr7 (256-401)||(41407293-41407441)
chr7 (305-401)||(2936640-2936739)
chr7 (305-401)||(8047923-8048022)
chr7 (372-401)||(8048066-8048095)
chr7 (428-513)||(11766247-11766332)
chr7 (372-401)||(12080770-12080799)
chr7 (372-401)||(14770146-14770175)
chr7 (372-401)||(14777998-14778027)
chr7 (372-401)||(15220597-15220626)
chr7 (372-401)||(15230136-15230165)
chr7 (372-401)||(20516991-20517020)
chr7 (372-401)||(22479277-22479306)
chr7 (372-401)||(24720332-24720361)
chr7 (372-401)||(25818554-25818583)
chr7 (372-401)||(27812013-27812042)
chr7 (372-401)||(28605513-28605542)
chr7 (372-401)||(32852928-32852957)
chr7 (372-401)||(34986596-34986625)
chr7 (305-401)||(38367953-38368052)
chr7 (372-401)||(38876265-38876294)
chr7 (372-401)||(45225331-45225360)
chr7 (372-401)||(45225464-45225493)
chr7 (414-459)||(48193207-48193252)
chr7 (372-401)||(48454642-48454671)
chr7 (423-459)||(14719101-14719137)
chr7 (476-524)||(18829699-18829747)
chr7 (423-459)||(27811996-27812032)
chr7 (373-401)||(32577615-32577643)
[»] scaffold0325 (1 HSPs)
scaffold0325 (424-558)||(6660-6795)
[»] chr6 (24 HSPs)
chr6 (423-510)||(4838398-4838485)
chr6 (423-510)||(14488415-14488502)
chr6 (423-513)||(11742439-11742529)
chr6 (305-510)||(4898435-4898643)
chr6 (423-510)||(21969883-21969970)
chr6 (426-507)||(11009906-11009987)
chr6 (319-401)||(29646228-29646314)
chr6 (319-401)||(31132976-31133062)
chr6 (423-510)||(4898116-4898203)
chr6 (414-453)||(27828412-27828451)
chr6 (423-453)||(15962847-15962877)
chr6 (374-459)||(5187830-5187915)
chr6 (372-401)||(5187869-5187898)
chr6 (372-401)||(8171945-8171974)
chr6 (372-401)||(9955895-9955924)
chr6 (372-401)||(14488364-14488393)
chr6 (305-401)||(29646363-29646461)
chr6 (422-514)||(32889671-32889761)
chr6 (372-401)||(33730587-33730616)
chr6 (319-401)||(4184359-4184445)
chr6 (423-459)||(9955905-9955941)
chr6 (319-397)||(15962841-15962923)
chr6 (319-401)||(27828411-27828497)
chr6 (373-401)||(32889637-32889665)
[»] chr3 (34 HSPs)
chr3 (374-513)||(8814839-8814978)
chr3 (423-510)||(36824065-36824152)
chr3 (414-510)||(3800298-3800394)
chr3 (423-510)||(12127651-12127738)
chr3 (346-515)||(48765200-48765375)
chr3 (372-515)||(50912990-50913133)
chr3 (372-511)||(53467345-53467484)
chr3 (423-513)||(8815098-8815188)
chr3 (305-401)||(6109117-6109216)
chr3 (369-510)||(22894542-22894682)
chr3 (319-401)||(7848535-7848621)
chr3 (423-510)||(33837804-33837892)
chr3 (319-401)||(45059633-45059719)
chr3 (423-499)||(53581669-53581745)
chr3 (423-510)||(13349245-13349332)
chr3 (423-453)||(45059643-45059673)
chr3 (305-401)||(994675-994774)
chr3 (372-401)||(994822-994851)
chr3 (372-401)||(6114846-6114875)
chr3 (305-401)||(6114924-6115023)
chr3 (305-401)||(17226155-17226254)
chr3 (372-401)||(17226275-17226304)
chr3 (372-401)||(21727710-21727739)
chr3 (305-401)||(26152463-26152562)
chr3 (305-401)||(31039661-31039760)
chr3 (372-401)||(32203212-32203241)
chr3 (319-401)||(2868264-2868350)
chr3 (319-401)||(4043636-4043722)
chr3 (319-401)||(6109265-6109351)
chr3 (319-401)||(6748750-6748836)
chr3 (319-401)||(11460158-11460244)
chr3 (319-401)||(26158333-26158419)
chr3 (434-510)||(29239589-29239665)
chr3 (425-453)||(51148124-51148152)
[»] chr1 (29 HSPs)
chr1 (423-558)||(28704470-28704606)
chr1 (347-462)||(9005160-9005275)
chr1 (423-506)||(36389451-36389534)
chr1 (423-510)||(20201688-20201775)
chr1 (423-510)||(28454825-28454912)
chr1 (423-510)||(13157269-13157358)
chr1 (305-510)||(28764537-28764745)
chr1 (319-401)||(12864294-12864380)
chr1 (374-462)||(28182204-28182292)
chr1 (319-401)||(32716408-32716494)
chr1 (372-503)||(32156052-32156183)
chr1 (305-510)||(23413636-23413842)
chr1 (424-510)||(26842986-26843072)
chr1 (476-513)||(463003-463040)
chr1 (305-401)||(463410-463509)
chr1 (305-401)||(13157657-13157756)
chr1 (372-401)||(14387497-14387526)
chr1 (305-401)||(20411146-20411245)
chr1 (372-401)||(20411294-20411323)
chr1 (372-401)||(27389546-27389575)
chr1 (476-513)||(27787830-27787867)
chr1 (305-401)||(27787898-27787997)
chr1 (299-372)||(32374670-32374743)
chr1 (305-401)||(34515228-34515327)
chr1 (372-401)||(51431915-51431944)
chr1 (423-510)||(3273452-3273540)
chr1 (319-401)||(13943359-13943445)
chr1 (319-401)||(16960379-16960465)
chr1 (319-401)||(39424365-39424451)
[»] scaffold0217 (1 HSPs)
scaffold0217 (305-510)||(20608-20817)
[»] scaffold0068 (2 HSPs)
scaffold0068 (305-401)||(58042-58141)
scaffold0068 (319-401)||(57907-57993)
[»] scaffold0627 (1 HSPs)
scaffold0627 (423-510)||(4179-4266)
[»] scaffold0015 (2 HSPs)
scaffold0015 (476-510)||(9721-9755)
scaffold0015 (305-401)||(9831-9930)


Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 30 - 355
Target Start/End: Original strand, 8317730 - 8318043
Alignment:
Q  30 tggtgtagtccaaatgatggaatcttgacttaattggactttgaccagaacatgcatggcaatgtcttcttcattctaaagcttctttaccgtctaccgg 129  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8317730 tggtgtagtcaaaatgatggaatcttgacttaattggactttgaccagaacatgcatggcaatgtcttcttcattctaaagcttctttaccgtctaccgg 8317829  T
Q  130 atctaagtgggcatatgaatatcatcaagcttatttgttcacgtttcacaagtgctttgtctgattttcggacttttctacacttaaccgtgttcttagg 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8317830 atctaagtgggcatatgaatatcatcaagcttatttgttcacgtttcataagtgctttgtctgattttcggacttttctacacttaaccgtgttcttagg 8317929  T
Q  230 aacttaatcaattaattcatatttcaatatgtatatgaaatttgctatgatacaactattagtttttacgaagacgtgttttagcagcatacaccttaaa 329  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||| ||||||    
T  8317930 aacttgatcaattaattaatatttcaatatgtatatgaaatttgcta------------tagtttttacgaagacgtgttttagcagcatacatcttaaa 8318017  T
Q  330 gtgtatttagacattatttagttatc 355  Q
    ||||||||| ||||||||||||||||    
T  8318018 gtgtatttaaacattatttagttatc 8318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 393 - 605
Target Start/End: Original strand, 8318042 - 8318255
Alignment:
Q  393 tctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccacttttta 492  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  8318042 tctagcaaaggtttgcggtagttgttaaattacacccacttattttttagaatgagtgtttcaacaacatgcacct-aaaatatatttaaccacttttta 8318140  T
Q  493 gttatatctttactaaaatac-tcttataaaaatcaaacgggtgtatcatagcaaatccatatatattaa-acttactctatttgtagattcaatataat 590  Q
    ||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  8318141 gttatatctttgctaaaatacttcttataaaaaccaagcgggtgtatcatagcaaatccatatatattaagacttgctctatttgtagattcaatgtaat 8318240  T
Q  591 tgttcattagttcat 605  Q
    |||||||||||||||    
T  8318241 tgttcattagttcat 8318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 503
Target Start/End: Original strand, 38952243 - 38952374
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccactta-ttttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||| |||||||  |||| ||   ||||||| ||||||||| ||| |||||||||| |||| ||| | | |||| ||| | ||    
T  38952243 taaaaaataagtgggtgtattttagcaaatgtttgtggacgttgttaacttacacccatttatttttttagaacgagtgttttagccacattcatattaa 38952342  T
Q  472 aatatatttaaccactttttagttatatcttt 503  Q
    | | |||||||| |||||||||||||||||||    
T  38952343 agtgtatttaacaactttttagttatatcttt 38952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 17421748 - 17421875
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||  | |   | | ||  |||  ||||||||||||||||||||||||||||||| | |||||| || || ||    
T  17421748 ctaaaaaataagtgggtgtattctagcaaatgtctataggagtttctaacatacacccacttattttttagaatgagtattttagcaacattcaccttaa 17421847  T
Q  472 aatatatttaaccactttttagttatat 499  Q
      | |||| ||| |||||||||||||||    
T  17421848 ggtgtattaaacaactttttagttatat 17421875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 28747746 - 28747955
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||  |||||||||   ||| ||||||||| || | ||||||||| |   ||||||| ||||||||||||||||||||||    
T  28747746 gtgttttagcaagctacaccttagggtgtatttaactattttttagttataacttgctaaaacacacattctaaaaattaagtgggtgtattctagcaaa 28747845  T
Q  402 gatttgcggtaattgttaaattacacccacttatttttt-agaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatc 500  Q
      | |   | | ||| |||  |||||||||||||||||| |||| ||||  || | |||||| || || || || |||||||| ||||||||||||||||    
T  28747846 tgtctataggagttgctaacatacacccacttatttttttagaaggagtgctttagcaacattcaccttaagatgtatttaacaactttttagttatatc 28747945  T
Q  501 tttactaaaa 510  Q
    ||| ||||||    
T  28747946 tttgctaaaa 28747955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 6261068 - 6260978
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    ||||||||||||||||||| || | || ||| |||||||| || || ||  | |||||||||||||||||||||||| ||| |||||||||    
T  6261068 tacacccacttattttttaaaaggtgtgttttaacaacattcaccttaaggtgtatttaaccactttttagttatatttttgctaaaatac 6260978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 15294134 - 15294230
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||  ||||| ||||||||||| | ||||||| ||| |||||||| ||||| ||| | |||||||| |||||||| |||| ||||| ||||||    
T  15294134 ttgttaacgtacactcacttatttttcaaaatgagtgttttaacaacattcatcttaaagtgtatttaacaactttttaattatgtctttgctaaaa 15294230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 17210015 - 17209975
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  17210015 ctaaaatactcctaaaaaataagtgggtgtattctagcaaa 17209975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 498
Target Start/End: Original strand, 3349402 - 3349465
Alignment:
Q  435 ttttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttata 498  Q
    ||||||||||| ||| ||| |||| ||||||||| ||| ||||||||||||||||| |||||||    
T  3349402 ttttttagaataagtgtttaaacatcatgcatctcaaagtatatttaaccacttttaagttata 3349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 4736796 - 4736879
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||| ||||| |||||||||  || | ||||||||| ||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  4736796 tacatcttaaggtgtatttaaccactttttagttattcacttgctaaaatactcctaaaaaataagtggatgtattctagcaaa 4736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 289 - 434
Target Start/End: Original strand, 10470961 - 10471110
Alignment:
Q  289 tagtttttacgaagacgtgttttagcagcatacaccttaaagtgtatttagaca-ttatttagttatcacgtactaaaacactc---ctaaaaaataagt 384  Q
    ||||||||| ||||  ||||||||||| ||| ||||||  |||||||||||  | || ||||||||| || | ||||||||||    |||||| ||||||    
T  10470961 tagtttttatgaagttgtgttttagcaacatgcacctttgagtgtatttagctacttttttagttatgacatgctaaaacactaattctaaaacataagt 10471060  T
Q  385 gggtgtattctagcaaagatttgcggtaattgttaaattacacccactta 434  Q
    ||||||||| |||||||  |||| || | ||| ||| |||||||||||||    
T  10471061 gggtgtattttagcaaatgtttgtgggagttgctaacttacacccactta 10471110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 32736365 - 32736452
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  32736365 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 32736452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 12910150 - 12910012
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||    |   | | ||| |||  ||||| ||||||| |||||||||| || ||| |||||||| || || ||    
T  12910150 ctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacactcacttatattttagaatgtgtgttttaacaacattcaccttaa 12910051  T
Q  472 aatatatttaaccactttttagttatatctttactaaaa 510  Q
     || |||||||| | |||||| |||||||||| ||||||    
T  12910050 gatgtatttaacaattttttaattatatctttgctaaaa 12910012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 14369751 - 14369959
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  14369751 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaa 14369850  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  |||||||||||||||||||||| | || ||| | |||||| || || ||  | || ||||| |||||||||||||||||    
T  14369851 tgcctataggagttgctaacatacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtagttaacaactttttagttatatct 14369950  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  14369951 ttgctaaaa 14369959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 470 - 510
Target Start/End: Complemental strand, 17233304 - 17233264
Alignment:
Q  470 aaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  17233304 aaaatatatttaacaactttttagttatatcttttctaaaa 17233264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 30688100 - 30688014
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  30688100 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 30688014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 4738037 - 4738124
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||| |||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  4738037 tacacccacttatattttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 4738124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 510
Target Start/End: Original strand, 9124704 - 9124896
Alignment:
Q  323 ccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct----aaaaaataagtgggtgtattctagcaaagatttgcggtaattgtt 418  Q
    |||||| ||||||||| | ||| ||||||||| || | ||||||||| | |    ||||||||||||| ||||||||||||||    |   | | |||||    
T  9124704 ccttaaggtgtatttaaatattttttagttataacttgctaaaacacacattctaaaaaaataagtggatgtattctagcaaatgcctatagaagttgtt 9124803  T
Q  419 aaattacacccacttatttttta-gaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||  ||||||||||||||||||| ||||| || ||| | |||||| || || ||  | |||||||| | ||||||||||||||||| ||||||    
T  9124804 aacatacacccacttattttttaagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaaatttttagttatatctttgctaaaa 9124896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 33696051 - 33696136
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttatcacgtactaaaaca---ctcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||   | | ||||||||| || | ||||||||   || ||||||||||||||||||||||||||||||    
T  33696051 tacaccttaaggtgtatttaactactttttagttataacatgctaaaacataacttctaaaaaataagtgggtgtattctagcaaa 33696136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 857996 - 858082
Alignment:
Q  424 acacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||| ||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  857996 acacccacttattttctagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Complemental strand, 1797490 - 1797460
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  1797490 tacacccacttattttttagaatgagtattt 1797460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 6436528 - 6436618
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    |||| |||||||||||||||||||  | ||| | ||| || || || ||  | |||||||| ||||||||||||||||||| |||||||||    
T  6436528 tacaaccacttattttttagaatgtttgttttagcaatattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaatac 6436618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 3960766 - 3960737
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  3960766 ctaaaaaataagtgggtgtattctagcaaa 3960737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 4737916 - 4738015
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |   ||||||||||||||||||||| ||||||||    
T  4737916 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaa 4738015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 453
Target Start/End: Complemental strand, 7014602 - 7014573
Alignment:
Q  424 acacccacttattttttagaatgagtattt 453  Q
    ||||||||||||||||||||||||||||||    
T  7014602 acacccacttattttttagaatgagtattt 7014573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 15809029 - 15809058
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  15809029 ctaaaaaataagtgggtgtattctagcaaa 15809058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Complemental strand, 17232940 - 17232903
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  17232940 tatttaacaactttttagttatatctttgctaaaatac 17232903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 503
Target Start/End: Complemental strand, 22701941 - 22701741
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta--aaaaataagtgggtgtattctagcaaag 402  Q
    |||||||||||   |||||||||| ||| |||||   | | ||||||||| || | ||||||||| |||   |||||||||||||||||||||||||||     
T  22701941 gtgttttagcaagttacaccttaaggtgcatttaactactttttagttataacttgctaaaacacaccttccaaaaataagtgggtgtattctagcaaat 22701842  T
Q  403 atttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctt 502  Q
      ||     | ||| |||  ||||||| |||||||||||||| | || ||| | |||||| || || ||| | ||||| || ||||||||||||||||||    
T  22701841 gcttataagagttgctaacgtacacccgcttattttttagaaggtgtgttttagcaacattcaccttaaagtgtatttcacaactttttagttatatctt 22701742  T
Q  503 t 503  Q
    |    
T  22701741 t 22701741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 25912240 - 25912141
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  25912240 gtgttttagcaagttacaccttaaggtgtatttaattactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 25912141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 29302155 - 29302056
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  29302155 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 29302056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 30687965 - 30687866
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  30687965 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 30687866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 37249438 - 37249537
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  37249438 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 37249537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 499
Target Start/End: Complemental strand, 2695173 - 2695097
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatat 499  Q
    |||||||||||||||||||||| | || ||| | |||||| || || || || |||||||| || ||||||||||||    
T  2695173 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaagatgtatttaacaacattttagttatat 2695097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 17605118 - 17605082
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||||||||||||||||||| |||||||| |||||    
T  17605118 tacacccacttattttttagaaggagtattttaacaa 17605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 401
Target Start/End: Complemental strand, 22800768 - 22800740
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||||||||||||||||||||    
T  22800768 taaaaaataagtgggtgtattctagcaaa 22800740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 503
Target Start/End: Original strand, 31752221 - 31752301
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    |||||| ||||||||||||||| | || ||| | |||||| || || ||  | |||||||| |||||||||||||||||||    
T  31752221 tacacctacttattttttagaaggtgtgttttagcaacattcaccttaatgtgtatttaacaactttttagttatatcttt 31752301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 453
Target Start/End: Complemental strand, 33282331 - 33282303
Alignment:
Q  425 cacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||    
T  33282331 cacccacttattttttagaatgagtattt 33282303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 37282226 - 37282266
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||| |||||||||||||||||| ||||||| |||||||    
T  37282226 ctaaaatactcctaaaaaataagtgagtgtattttagcaaa 37282266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 372 - 520
Target Start/End: Original strand, 5752 - 5900
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||  | |   | | ||| ||| ||||||||||||||||||||||| | || ||| | |||||| || || ||    
T  5752 ctaaaaaataagtgggtgtattctagcaaatgtctataggagttgctaacttacacccacttattttttagaaggtgtgttttagcaacattcaccttaa 5851  T
Q  472 aatatatttaaccactttttagttatatctttactaaaatactcttata 520  Q
      |||||||||| ||||||||||||||||||| |||||| |||| ||||    
T  5852 ggtatatttaacaactttttagttatatcttttctaaaacactcctata 5900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 537
Target Start/End: Complemental strand, 29453075 - 29452941
Alignment:
Q  404 tttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    ||||||| | ||||||| |||||||||||||||||||| ||| | ||||| | ||||||| || | || || |||||| |||||||||||||||||||||    
T  29453075 tttgcggaagttgttaacttacacccacttattttttaaaataattattttagcaacatgtatgtgaagatgtatttatccactttttagttatatcttt 29452976  T
Q  504 actaaaata-ctcttataaaaatcaaacgggtgta 537  Q
     ||||||||  ||||| ||||| |||| |||||||    
T  29452975 gctaaaatatttcttaaaaaaaacaaatgggtgta 29452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 476 - 558
Target Start/End: Original strand, 43660835 - 43660918
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatact-cttataaaaatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||| |||  ||||||||| |||||||||| |||||||    
T  43660835 tatttaaccactttttagttatatctttcctaaaatactcctcataaaaaacaattgggtgtatcttagcaaatccctatatat 43660918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 34082641 - 34082554
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  34082641 tacacccacttattttttagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 34082554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 29512074 - 29512284
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct-----aaaaaataagtgggtgtattctagca 399  Q
    |||||||||||   ||||||||||||||||||||  || | ||||||||| || | ||||||||| |||     ||||||||||||||||||| |||| |    
T  29512074 gtgttttagcaagctacaccttaaagtgtatttaaccactttttagttataacttgctaaaacacaccttctaaaaaaaataagtgggtgtatcctagta 29512173  T
Q  400 aagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatat 499  Q
    ||  | |   | | ||| |||  || ||||||||||||| ||||||| || ||| | |||||| || |  ||||| |||||||| | |||||||||||||    
T  29512174 aatgtctatagaagttgctaacatatacccacttattttctagaatgtgtgttttagcaacattcaccataaaatgtatttaacaattttttagttatat 29512273  T
Q  500 ctttactaaaa 510  Q
    |||| ||||||    
T  29512274 ctttgctaaaa 29512284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 768664 - 768752
Alignment:
Q  423 tacacccacttattttttagaatgagta-tttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| ||| ||| | |||||| || || ||  |||||||||| ||||||||||||||| ||| ||||||    
T  768664 tacacccacttattttttagaatgtgtatttttagcaacattcaccttaaggtatatttaacaactttttagttatatttttgctaaaa 768752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 503
Target Start/End: Original strand, 23387247 - 23387327
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    |||||||||||||||||||||||| || ||| ||||| || || || ||  | |||||||| |||||||||||||||||||    
T  23387247 tacacccacttattttttagaatgtgtgttttaacaagattcaccttaaggtgtatttaacaactttttagttatatcttt 23387327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 33739621 - 33739534
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  33739621 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 33739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 462
Target Start/End: Original strand, 29403980 - 29404104
Alignment:
Q  341 cattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattt 437  Q
    |||| |||||||||||  | |||||||||||   |||||||||||||||||||||| |||||||   ||| |  | ||| ||| ||||||||||||||||    
T  29403980 cattttttagttatcatttgctaaaacactcattctaaaaaataagtgggtgtattttagcaaatgcttgtgagagttgctaacttacacccacttattt 29404079  T
Q  438 tttagaatgagtatttcaacaacat 462  Q
    | |||||| ||| ||| | ||||||    
T  29404080 tctagaattagtgttttagcaacat 29404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 13002021 - 13002120
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||  |||||||||  || | |||||||||||| | |||||||||||   |||||||||||| ||||||||| |||||||    
T  13002021 gtgttttagcatgctacaccttagggtgtatttaaccactttttagttatcacttgctaaaacactccttctaaaaaataagagggtgtattttagcaaa 13002120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 510
Target Start/End: Complemental strand, 42850140 - 42850003
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaa 472  Q
    |||||||||||||| ||||||||||||||    |   | ||||| |||  ||||||||  |||| ||||||| |||| ||| | |||||| || || ||     
T  42850140 taaaaaataagtggatgtattctagcaaatgcctataggaattgctaacatacacccatctattctttagaaggagtgttttagcaacattcaccttaag 42850041  T
Q  473 atatatttaaccactttttagttatatctttactaaaa 510  Q
    || |||||||| ||||||||||||||||||| ||||||    
T  42850040 atgtatttaacaactttttagttatatctttgctaaaa 42850003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 1576727 - 1576591
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac-tcttataa 521  Q
    ||||||||||||||||| |||| | || ||| | |||||| || || ||  | |||| ||| |||||||||||||||||||||||||| ||  ||||  |    
T  1576727 tacacccacttatttttcagaaggtgtgttttatcaacattcaccttaaggtgtattcaacaactttttagttatatctttactaaaacacaccttaata 1576628  T
Q  522 aaatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    ||| | |  ||||||||| ||||||| ||||||||||    
T  1576627 aaaactagtgggtgtatcctagcaaacccatatatat 1576591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 39906466 - 39906380
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  39906466 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 39906380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 499
Target Start/End: Original strand, 41528016 - 41528092
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatat 499  Q
    ||||||||||||||||||| ||||||| ||| | ||| || ||||| ||  | |||||||| |||||||||||||||    
T  41528016 tacacccacttattttttaaaatgagtgttttagcaatattcatcttaaggtgtatttaacaactttttagttatat 41528092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 44257468 - 44257554
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| ||||||| |  |||| ||||||||| ||| | |||||| ||||   ||||||||||||||||||||||||||||||    
T  44257468 tacaccttaaggtgtattgaaccattttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaa 44257554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 8386759 - 8386684
Alignment:
Q  435 ttttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||| |||| ||| | |||||| || || ||| | |||||||| ||||||||||||||||||| ||||||    
T  8386759 ttttttagaaggagtgttttagcaacattcaccttaaagtgtatttaacaactttttagttatatctttgctaaaa 8386684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 15554133 - 15554172
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtattt 453  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  15554133 ttgttagaatacacccacttattttttagaatgagtattt 15554172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 515
Target Start/End: Complemental strand, 22711215 - 22711176
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatactc 515  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  22711215 tatttaaccactttttagttatttatttactaaaatactc 22711176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 400
Target Start/End: Original strand, 45629778 - 45629817
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaa 400  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  45629778 ctaaaacacacctaaaaaataagtgggtatattctagcaa 45629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 20939830 - 20939860
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  20939830 tacacccacttattttttagaatgagtattt 20939860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 558
Target Start/End: Complemental strand, 32601459 - 32601329
Alignment:
Q  429 cacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac-tcttataaaaatca 527  Q
    |||||||||||||||||| || ||| | |||||| || || ||  |||| ||||| ||||||| ||||||||||| |||||| ||  ||||  |||| |     
T  32601459 cacttattttttagaatgtgtgttttagcaacattcaccttaaggtatacttaacaacttttttgttatatctttgctaaaacacaccttaataaaaact 32601360  T
Q  528 aacgggtgtatcatagcaaatccatatatat 558  Q
    |  ||||||||| ||||||| ||||||||||    
T  32601359 agtgggtgtatcctagcaaacccatatatat 32601329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Complemental strand, 39904740 - 39904710
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  39904740 tacacccacttattttttagaatgagtattt 39904710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Complemental strand, 44257544 - 44257514
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  44257544 tacacccacttattttttagaatgagtattt 44257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 1297728 - 1297691
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagc 398  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  1297728 ctaaaatactcctaaaaaataagtggttgtattctagc 1297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 1750188 - 1750287
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| ||| |||||   | | ||||||||| || ||||||||||| |||   ||||| ||||||||||||||||||||||    
T  1750188 gtgttttagcaagctacaccttaaggtgcatttaactactttttagttataacttactaaaacacaccttctaaaaattaagtgggtgtattctagcaaa 1750287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 4293343 - 4293314
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  4293343 ctaaaaaataagtgggtgtattctagcaaa 4293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 9690297 - 9690268
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  9690297 ctaaaaaataagtgggtgtattctagcaaa 9690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 17265396 - 17265367
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  17265396 ctaaaaaataagtgggtgtattctagcaaa 17265367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 20939849 - 20939820
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  20939849 ctaaaaaataagtgggtgtattctagcaaa 20939820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 33173566 - 33173595
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  33173566 ctaaaaaataagtgggtgtattctagcaaa 33173595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 39904721 - 39904750
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  39904721 ctaaaaaataagtgggtgtattctagcaaa 39904750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 44542916 - 44542945
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  44542916 ctaaaaaataagtgggtgtattctagcaaa 44542945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 3769464 - 3769550
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||| ||||||||||    
T  3769464 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtgttctagcaaa 3769550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 401
Target Start/End: Complemental strand, 6332414 - 6332386
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||||||||||||||||||||    
T  6332414 taaaaaataagtgggtgtattctagcaaa 6332386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 9690278 - 9690314
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||||||||||||||||||| |||||||| |||||    
T  9690278 tacacccacttattttttagaaggagtattttaacaa 9690314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 18370306 - 18370226
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    |||||||||||||||||||||| | |  ||| | |||||| || || ||  |||||||||| | |||||||||||||||||    
T  18370306 tacacccacttattttttagaaggtgcgttttagcaacattcaccttaaggtatatttaacaattttttagttatatcttt 18370226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 503
Target Start/End: Complemental strand, 29512040 - 29511960
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    |||||||||||||||| ||||| | || ||| | |||||| ||  | || || |||||||| |||||||||||||||||||    
T  29512040 tacacccacttattttctagaaggtgtgttttagcaacattcactttaagatgtatttaacaactttttagttatatcttt 29511960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 14948244 - 14948331
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| || ||| | |||||| || || || || |||||||| ||||||||||||||||||||||||||    
T  14948244 tacacccacttattttttagaatgcgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctttactaaaa 14948331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 372 - 520
Target Start/End: Complemental strand, 40496283 - 40496134
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttt-agaatgagtatttcaacaacatgcatctaa 470  Q
    ||||||||||||||||||||||||||||||  | |   | | ||| ||| ||||||||||||||||||| |||| | || ||| | |||||| || || |    
T  40496283 ctaaaaaataagtgggtgtattctagcaaatgtctataggagttgctaacttacacccacttatttttttagaaggtgtgttttagcaacattcacctta 40496184  T
Q  471 aaatatatttaaccactttttagttatatctttactaaaatactcttata 520  Q
    |  |||||||||| ||||||||||||||||||| |||||| |||| ||||    
T  40496183 aggtatatttaacaactttttagttatatcttttctaaaacactcctata 40496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 346 - 503
Target Start/End: Original strand, 15725221 - 15725381
Alignment:
Q  346 tttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttag 442  Q
    ||||||||| || ||||||||||| |||   ||||||||||||||||||| ||||||||    |   | | ||| |||  ||||| ||||||||||||||    
T  15725221 tttagttataacttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcctataggagttgctaacatacactcacttattttttag 15725320  T
Q  443 aatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    || | || ||| |||||||| || || || || |||||||| |||||||||||||||||||    
T  15725321 aaggtgtgttttaacaacattcaccttaagatgtatttaacaactttttagttatatcttt 15725381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 402
Target Start/End: Original strand, 5157031 - 5157118
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaag 402  Q
    |||||||||| |||||||||  || | ||||||||| ||| |||||||| ||||||   |||||||||||||||||||||||||||||    
T  5157031 tacaccttaaggtgtatttaaccactttttagttattcacttactaaaatactccttctaaaaaataagtgggtgtattctagcaaag 5157118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 5046825 - 5046739
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  |||| ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  5046825 tacaccttaaggtgtatttaaccattttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 5046739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 499
Target Start/End: Original strand, 33106034 - 33106110
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatat 499  Q
    |||||||||||||||||||||||| || ||| | |||||| || || ||| | |||||||| |||||||||||||||    
T  33106034 tacacccacttattttttagaatgtgtgttttagcaacattcaccttaaagtgtatttaacaactttttagttatat 33106110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 38425741 - 38425649
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatactc 515  Q
    ||||||||||||||||||| |||| || ||| |||||||| || || ||  | |||||||| |||||| |||||||||||| |||||| ||||    
T  38425741 tacacccacttattttttaaaatgtgtgttttaacaacattcaccttaaggtgtatttaacaacttttcagttatatctttgctaaaacactc 38425649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 41172443 - 41172529
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||  || | ||||||||| ||| | |||||| ||||   ||||||||||||||||||||||||||||||    
T  41172443 tacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaa 41172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 49425849 - 49425762
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  49425849 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 49425762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 6946646 - 6946849
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacac---tcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   ||||||||||||||||||||   | | ||||||||| || | |||||||||   | ||||||||||||||||||||| ||||||||    
T  6946646 gtgttttagcaagctacaccttaaagtgtatttaactactttttagttataacttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaa 6946745  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  |||||||||||||||||||||| | || ||| | |||||| || |     || |||||||| |||||||||||||||||    
T  6946746 tgcctataggagttgctaacatacacccacttattttttagaaggtgtgttttagcaacattcacc-----atgtatttaacaactttttagttatatct 6946840  T
Q  502 ttactaaaa 510  Q
    |||| ||||    
T  6946841 ttaccaaaa 6946849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 510
Target Start/End: Original strand, 36955483 - 36955565
Alignment:
Q  428 ccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||| || ||| ||| | |||||| || || ||| |||||||||| | ||||||||||||||||| ||||||    
T  36955483 ccacttattttttagtataagtgttttagcaacattcaccttaaagtatatttaacaattttttagttatatctttgctaaaa 36955565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 510
Target Start/End: Complemental strand, 11777665 - 11777498
Alignment:
Q  346 tttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttag 442  Q
    ||||||||| || ||||||||||| |||   ||||||||||||||||||| ||||||||   ||   | | ||| |||  |||||||| |||||||||||    
T  11777665 tttagttataacttactaaaacacaccttctaaaaaataagtgggtgtatcctagcaaatgcttataggagttgctaacatacacccaattattttttag 11777566  T
Q  443 aatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||  || ||| | |||||| || || ||  | |||||||| |||||||||||||| |||| ||||||    
T  11777565 aatatgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatacctttgctaaaa 11777498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 346 - 401
Target Start/End: Complemental strand, 6137668 - 6137610
Alignment:
Q  346 tttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||| || ||||||||||| |||   ||||||||||||||||||||||||||||    
T  6137668 tttagttataacttactaaaacacaccttctaaaaaataagtgggtgtattctagcaaa 6137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 12584471 - 12584385
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  12584471 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 12584385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 14203055 - 14202969
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttatc-acgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | |||||||||| || | |||||| ||||   ||||||||||||||||||||||||||||||    
T  14203055 tacaccttaaggtgtatttaaccactttttagttatccacttgctaaaatactcattctaaaaaataagtgggtgtattctagcaaa 14202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 401
Target Start/End: Complemental strand, 578801 - 578708
Alignment:
Q  311 tagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| |||||||||||| |||||||||  || | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  578801 tagcaacatacaccttaaggtgtatttattcactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 578708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 41172568 - 41172489
Alignment:
Q  374 aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtattt 453  Q
    ||||||||| ||||||| ||||||||||  ||   || | ||| || | |||||||||||||||||||||||||||||||    
T  41172568 aaaaaataaatgggtgtgttctagcaaatcttataggcatttgctagaatacacccacttattttttagaatgagtattt 41172489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 45875881 - 45875968
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||||||| |||| || ||| | |||||| || || ||  | |||||||| | ||||||||||||||||| ||||||    
T  45875881 tacacccacttattttttaaaatgtgtgttttagcaacattcaccttaaggtgtatttaacaattttttagttatatctttgctaaaa 45875968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 578868 - 578898
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  578868 tacacccacttattttttagaatgagtattt 578898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 13621423 - 13621453
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  13621423 tacacccacttattttttagaatgagtattt 13621453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 14202979 - 14203009
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  14202979 tacacccacttattttttagaatgagtattt 14203009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 16553426 - 16553634
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |   ||||||||||||||| ||||||||||||||    
T  16553426 gtgttttagcaagctacaccttaaggtgtatttaattactttttagttataacttgctaaaacacactttctaaaaaataagtggatgtattctagcaaa 16553525  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  |||||| |||||| |||||||| | || ||| | |||||| || || || || |||||||| ||||||||||||||| |    
T  16553526 tgcctataggagttgctaacatacacctacttatattttagaaggtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatat 16553625  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  16553626 ttgctaaaa 16553634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 17745181 - 17745265
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagca 399  Q
    |||||||||| |||||||||  |||| ||||||||| ||| | |||||| ||||||   |||||||| |||||||||||||||||    
T  17745181 tacaccttaaggtgtatttaaccattttttagttattcacttgctaaaatactccttctaaaaaataggtgggtgtattctagca 17745265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 30258235 - 30258265
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  30258235 tacacccacttattttttagaatgagtattt 30258265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 515
Target Start/End: Original strand, 54742573 - 54742666
Alignment:
Q  424 acacccacttatttt--ttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatactc 515  Q
    |||||||||||||||  |||||||| || ||| | |||||| ||||| || || |||||||| | ||||| ||||||||||| |||||| ||||    
T  54742573 acacccacttattttttttagaatgtgtgttttagcaacattcatcttaagatgtatttaacaaatttttcgttatatctttgctaaaacactc 54742666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 578887 - 578858
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  578887 ctaaaaaataagtgggtgtattctagcaaa 578858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 3818834 - 3818863
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  3818834 ctaaaaaataagtgggtgtattctagcaaa 3818863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 10216379 - 10216350
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  10216379 ctaaaaaataagtgggtgtattctagcaaa 10216350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 13211905 - 13211934
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  13211905 ctaaaaaataagtgggtgtattctagcaaa 13211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 17181040 - 17181069
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  17181040 ctaaaaaataagtgggtgtattctagcaaa 17181069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 21519821 - 21519850
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  21519821 ctaaaaaataagtgggtgtattctagcaaa 21519850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 26958627 - 26958656
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  26958627 ctaaaaaataagtgggtgtattctagcaaa 26958656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 30258254 - 30258225
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  30258254 ctaaaaaataagtgggtgtattctagcaaa 30258225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 48560088 - 48560117
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  48560088 ctaaaaaataagtgggtgtattctagcaaa 48560117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 49970685 - 49970714
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  49970685 ctaaaaaataagtgggtgtattctagcaaa 49970714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 52437636 - 52437537
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||  || | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||| ||||    
T  52437636 gtgttttagcaaactacaccttaaggtgtatttaaccactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctaacaaa 52437537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 18470290 - 18470376
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||| ||||    
T  18470290 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaa 18470376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 20458922 - 20458834
Alignment:
Q  423 tacacccacttatt-ttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||| |||||||| |||| ||| |||||||| || || ||  | |||||||| ||||||||  ||||||||| ||||||    
T  20458922 tacacccacttatttttttagaaggagtgttttaacaacattcaccttaaggtgtatttaacaactttttaactatatctttgctaaaa 20458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 515
Target Start/End: Complemental strand, 38425636 - 38425556
Alignment:
Q  435 ttttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatactc 515  Q
    |||||||||| | || ||| |||||||| || || ||  | |||||||| ||||||||||||||| |||||||||| ||||    
T  38425636 ttttttagaaggtgtgttttaacaacattcaccttaaggtgtatttaacaactttttagttatatttttactaaaacactc 38425556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 34103077 - 34102941
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac-tcttataa 521  Q
    |||||||||||||||||||||||| || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| |||||| ||  ||||  |    
T  34103077 tacacccacttattttttagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttaata 34102978  T
Q  522 aaatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    ||| | | |||||||||| ||||||| ||||||||||    
T  34102977 aaaactagcgggtgtatcctagcaaacccatatatat 34102941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 558
Target Start/End: Complemental strand, 10616489 - 10616232
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   ||| ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  10616489 gtgttttagcaaactacaccttaaggtgtatttaactattttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 10616390  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  |||||||||||||||||||||| | || ||| | ||| || || || ||  |||||||||| |||||||||||||||||    
T  10616389 tgcctataggagttgctaacatacacccacttattttttagaaggtgtgttttagcaatattcaccttaatgtatatttaacaactttttagttatatct 10616290  T
Q  502 ttactaaaatac-tcttataaaaatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    || |||||| ||  ||||  |||| | |  ||||||||| ||||||| ||||||||||    
T  10616289 ttgctaaaacacaccttaataaaaactagtgggtgtatcctagcaaacccatatatat 10616232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 26042939 - 26043147
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  26042939 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaa 26043038  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | |||||||  |||||||||||||||||||||| | |||||| | ||| || || || ||  | |||||||| |||||||||||||||||    
T  26043039 tgcctataggagttgttaacatacacccacttattttttagaaggtgtattttagcaatattcaccttaaggtgtatttaacaactttttagttatatct 26043138  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  26043139 ttgctaaaa 26043147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 515
Target Start/End: Complemental strand, 25123745 - 25123644
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||  |||||||||||||||||||||||| || ||| | |||||| || || ||| | |||||||| ||||||||||||||||| | |||||| ||    
T  25123745 ttgttaacatacacccacttattttttagaatgtgtgttttagcaacattcaccttaaagtgtatttaacaactttttagttatatctatgctaaaacac 25123646  T
Q  514 tc 515  Q
    ||    
T  25123645 tc 25123644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 2823721 - 2823808
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||| ||||||||||||||| || ||| | |||||| || || || || |||||||| ||||||||||||||||||| ||||||    
T  2823721 tacacccaattattttttagaatgtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctttgctaaaa 2823808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 27545958 - 27545750
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  27545958 gtgttttagcaatctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 27545859  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
       ||   | | ||| |||  ||||||||||||| |||||||| | || ||| | |||||| || || ||  | |||||||| |||||||||||||||||    
T  27545858 tgcttataggagttgctaacatacacccacttatattttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatct 27545759  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  27545758 ttgctaaaa 27545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 347 - 502
Target Start/End: Original strand, 23544832 - 23544991
Alignment:
Q  347 ttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttta-g 442  Q
    |||||||| || ||||||||||| |||   ||||||||||||||||||||||| ||||  | |   | | ||| |||  ||||||||||||||||||| |    
T  23544832 ttagttataacttactaaaacacaccttctaaaaaataagtgggtgtattctaacaaatgtctataggagttgctaacatacacccacttattttttaag 23544931  T
Q  443 aatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctt 502  Q
    |||| || ||| | |||||| || || || || |||||||| ||||||||||||||||||    
T  23544932 aatgtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctt 23544991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 26630106 - 26630019
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  26630106 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 26630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 515
Target Start/End: Original strand, 30633185 - 30633276
Alignment:
Q  424 acacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatactc 515  Q
    ||||||||||||||||||||| | || ||| | |||||| ||||| ||  | |||||||| ||||||||||||||| ||| |||||| ||||    
T  30633185 acacccacttattttttagaaggtgtgttttagcaacattcatcttaaggtgtatttaacaactttttagttatatttttgctaaaacactc 30633276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 32069099 - 32069012
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  32069099 tacacccacttattttttagaaagtgtgttttagcaacattcaccttaaggtttatttaacaactttttagttatatctttgctaaaa 32069012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 400
Target Start/End: Complemental strand, 41943041 - 41942956
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagtta-tcacgtactaaaaca---ctcctaaaaaataagtgggtgtattctagcaa 400  Q
    ||||||||||||||||||||  || | |||||||| |||| | |||||| |   ||||||||||||||||||||||||||||||||    
T  41943041 tacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactcctcctaaaaaataagtgggtgtattctagcaa 41942956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 45299707 - 45299793
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||| | |||||||| || |||||||||||||||||||||||    
T  45299707 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaagtgtatttaacaac-ttttagttatatctttactaaaa 45299793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 453
Target Start/End: Complemental strand, 17884153 - 17883986
Alignment:
Q  289 tagtttttacgaagacgtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtg 385  Q
    ||||||||| ||||| ||||||||||| ||| ||||||    |||||||||  | | ||||||||| ||||  ||||||||||   ||||||||||||||    
T  17884153 tagtttttatgaagatgtgttttagcaacatgcacctttggatgtatttagctactttttagttatgacgtgttaaaacactcattctaaaaaataagtg 17884054  T
Q  386 ggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtattt 453  Q
    | |||||| || ||||   ||| || | ||| ||| ||||| |||||||| |||||||| | ||||||    
T  17884053 gatgtattttaacaaatgcttgtgggagttgctaacttacatccacttatgttttagaaggtgtattt 17883986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 510
Target Start/End: Complemental strand, 25123505 - 25123368
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaa 472  Q
    |||||||||||||||||||||||||||||  | |   |   ||| |||  |||| ||| ||||||||||||| | || ||| | |||||| || || |||    
T  25123505 taaaaaataagtgggtgtattctagcaaatgtctataggcgttgctaacatacaaccatttattttttagaaggtgtgttttagcaacattcaccttaaa 25123406  T
Q  473 atatatttaaccactttttagttatatctttactaaaa 510  Q
     | |||||||| | ||||||||||||||||||||||||    
T  25123405 gtgtatttaacaattttttagttatatctttactaaaa 25123368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 373 - 510
Target Start/End: Complemental strand, 30207294 - 30207157
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaa 472  Q
    |||||||||||||||||||||||||||||    |   | | ||| |||  |||||||||||||||||||||  | || ||| | |||||| || || ||     
T  30207294 taaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacccacttattttttagatggtgtgttttagcaacattcaccttaag 30207195  T
Q  473 atatatttaaccactttttagttatatctttactaaaa 510  Q
     | |||||||| ||||||||||||||| ||||||||||    
T  30207194 gtgtatttaacaactttttagttatatatttactaaaa 30207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 5946905 - 5946993
Alignment:
Q  423 tacacccacttatttttt-agaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||| |||| | || |||||||||||| || || ||  | |||||||| ||||||||||||||| ||| ||||||    
T  5946905 tacacccacttatttttttagaaggtgtgtttcaacaacattcaccttaaggtttatttaacaactttttagttatatatttgctaaaa 5946993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 9483834 - 9483748
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  9483834 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 9483748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 499
Target Start/End: Original strand, 13269302 - 13269430
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttt-agaatgagtatttcaacaacatgcatctaa 470  Q
    ||||||||||||||||||||||||||||||  |||   | | ||| |||  |||||||||||||||||| |||||| || ||| | |||||| || || |    
T  13269302 ctaaaaaataagtgggtgtattctagcaaatgtttataggagttgctaacatacacccacttattttttaagaatgtgtgttttagcaacattcacctta 13269401  T
Q  471 aaatatatttaaccactttttagttatat 499  Q
    |  | |||||||| |||||||| ||||||    
T  13269402 aggtgtatttaacaactttttaattatat 13269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 17691292 - 17691205
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||| ||| ||||||    
T  17691292 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatttttgctaaaa 17691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 39922394 - 39922481
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||| |||||||||||||||||| || ||| | |||||| || ||  |  | |||||||| ||||||||||||||||||| ||||||    
T  39922394 tacactcacttattttttagaatgtgtgttttagcaacattcaccttgaggtgtatttaacaactttttagttatatctttgctaaaa 39922481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 8258390 - 8258528
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||    |   | | ||| |||  ||||||||||||||||||| || || | ||| | |||||| || || ||    
T  8258390 ctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacccacttattttttataaggaatgttttagcaacattcaccttaa 8258489  T
Q  472 aatatatttaaccactttttagttatatctttactaaaa 510  Q
      | |||||||| | ||||||||||||||||| ||||||    
T  8258490 ggtgtatttaacaattttttagttatatctttgctaaaa 8258528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 25281059 - 25281089
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  25281059 tacacccacttattttttagaatgagtattt 25281089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 510
Target Start/End: Complemental strand, 36899761 - 36899727
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||| ||||||||||||||||||||||||||    
T  36899761 tatttaacaactttttagttatatctttactaaaa 36899727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 44873142 - 44873180
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatact 514  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  44873142 tatttaactactttttagttatatctttgctaaaatact 44873180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 1783130 - 1783101
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  1783130 ctaaaaaataagtgggtgtattctagcaaa 1783101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 3154216 - 3154315
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  3154216 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 3154315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 503
Target Start/End: Original strand, 13468420 - 13468501
Alignment:
Q  423 tacacccacttatttttta-gaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    ||||||||||||||||||| ||| | || ||| | |||||| ||||| ||  | |||||||| |||||||||||||||||||    
T  13468420 tacacccacttattttttaagaaggtgtgttttagcaacattcatcttaaggtgtatttaacaactttttagttatatcttt 13468501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 14826360 - 14826389
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  14826360 ctaaaaaataagtgggtgtattctagcaaa 14826389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 19971500 - 19971529
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  19971500 ctaaaaaataagtgggtgtattctagcaaa 19971529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 21021313 - 21021284
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  21021313 ctaaaaaataagtgggtgtattctagcaaa 21021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 21442179 - 21442080
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| ||||||||||||  ||||||||   | | ||||||||| || |||||||||||||| |   |||||| ||||||||| ||||||||||    
T  21442179 gtgttatagcaacatacaccttaagatgtatttattaactttttagttataacttactaaaacactcccacataaaaattagtgggtgtgttctagcaaa 21442080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 21442419 - 21442448
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  21442419 ctaaaaaataagtgggtgtattctagcaaa 21442448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 510
Target Start/End: Complemental strand, 42556757 - 42556672
Alignment:
Q  425 cacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||||| || | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  42556757 cacccacttattttttaaaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 42556672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 43562220 - 43562175
Alignment:
Q  346 tttagttatcacgtactaaaacactcctaaaaaataagtgggtgta 391  Q
    ||||||||| || |||||||||||| |||||||| |||||||||||    
T  43562220 tttagttatgacatactaaaacacttctaaaaaagaagtgggtgta 43562175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 441
Target Start/End: Original strand, 44874202 - 44874271
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttta 441  Q
    |||||||||||||||||||||||||||||   | ||  | | |||||||  |||||||||||||||||||    
T  44874202 ctaaaaaataagtgggtgtattctagcaattgtctgtaggagttgttaacatacacccacttatttttta 44874271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 5642575 - 5642615
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||| ||||||| |||| |||||||||||||||||||||    
T  5642575 ctaaaatactcctacaaaaaaagtgggtgtattctagcaaa 5642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 5644516 - 5644556
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||| ||||||| |||| |||||||||||||||||||||    
T  5644516 ctaaaatactcctacaaaaaaagtgggtgtattctagcaaa 5644556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 17884039 - 17884083
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtatttcaaca 458  Q
    |||||||| |||| |||||||||||||||||||||| ||| ||||    
T  17884039 ttgttaaaatacatccacttattttttagaatgagtgttttaaca 17884083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 510
Target Start/End: Original strand, 34969925 - 34970005
Alignment:
Q  430 acttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||| |||| || ||| | |||||| || || ||| | |||||||  ||||||| ||||||||||||||||||    
T  34969925 acttattttttacaatgtgtgttttagcaacattcaccttaaagtgtatttaataactttttggttatatctttactaaaa 34970005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 2509516 - 2509309
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta--aaaaataagtgggtgtattctagcaaag 402  Q
    |||||||||||   |||||||||| ||  |||||  || | ||||||||| || | ||||||||| |||   |||||||||||||||||||||||||||     
T  2509516 gtgttttagcaagctacaccttaaggtacatttaaccactttttagttataacttgctaaaacacaccttctaaaaataagtgggtgtattctagcaaat 2509417  T
Q  403 atttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctt 502  Q
       |   | | |||||||  |||||||||||||| ||||||||| || ||| | |||||| || || || || |||||||| ||||||||||||||||||    
T  2509416 gcatataggagttgttaacatacacccacttattctttagaatgtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctt 2509317  T
Q  503 tactaaaa 510  Q
    | ||||||    
T  2509316 tgctaaaa 2509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 454225 - 454312
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| || ||| |||||||| ||||| ||  | |||||||| ||||||||||||||| ||| ||||||    
T  454225 tacacccacttattttttagaatgtgtgttttaacaacattcatcttaaggtgtatttaacaactttttagttatatatttgctaaaa 454312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 28912203 - 28912290
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  28912203 tacacccacttattttttagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 28912290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 18352442 - 18352303
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttta-gaatgagtatttcaacaacatgcatctaa 470  Q
    ||||||||||||||||||||||||||||||    |   | | ||| |||  ||||||||||||||||||| ||| | || ||| | |||||| ||||| |    
T  18352442 ctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacccacttattttttaagaaggtgtgttttagcaacattcatctta 18352343  T
Q  471 aaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |  | |||||||| |||||||||||||||||| |||||||    
T  18352342 aggtgtatttaacaactttttagttatatcttcactaaaa 18352303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 938895 - 939103
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  938895 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtatcctagcaaa 938994  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  |||||||||||| ||||||||| | || ||| | |||||| || || ||  | |||||||| |||||||||||||||||    
T  938995 tgcctataggagttgctaacatacacccacttactttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatct 939094  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  939095 ttgctaaaa 939103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 19069466 - 19069604
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||| |||||||| |  |   | | ||| |||  || |||||||||| |||||||| | || ||| | |||||| || || ||    
T  19069466 ctaaaaaataagtgggtgtatcctagcaaatagctataggagttgctaacataaacccacttatattttagaaggtgtgttttagcaacattcaccttaa 19069565  T
Q  472 aatatatttaaccactttttagttatatctttactaaaa 510  Q
      | |||||||| ||||||||||||||||||||||||||    
T  19069566 ggtgtatttaacaactttttagttatatctttactaaaa 19069604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 510
Target Start/End: Complemental strand, 38796949 - 38796811
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttatttttt-agaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||| |||||||||||||||||  | |   | | ||| |||  |||||||||||||||||| ||||||| |  || | |||||| ||||| ||    
T  38796949 taaaaaataagcgggtgtattctagcaaatgtctataggagttgctaacatacacccacttatttttttagaatgaatgctttagcaacattcatcttaa 38796850  T
Q  472 aatatatttaaccactttttagttatatctttactaaaa 510  Q
      | |||||||| ||||||||||||||||||| ||||||    
T  38796849 ggtgtatttaacaactttttagttatatctttgctaaaa 38796811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 2362808 - 2362848
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  2362808 ctaaaacacacctaaaaaataagtgggtgtatcctagcaaa 2362848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 2634030 - 2633990
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  2634030 ctaaaacacacctaaaaaataagtaggtgtattctagcaaa 2633990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 392
Target Start/End: Original strand, 6736555 - 6736586
Alignment:
Q  361 ctaaaacactcctaaaaaataagtgggtgtat 392  Q
    ||||||||||||||||||||||||||||||||    
T  6736555 ctaaaacactcctaaaaaataagtgggtgtat 6736586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 453
Target Start/End: Complemental strand, 12080838 - 12080759
Alignment:
Q  374 aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtattt 453  Q
    ||||||||||||||||| ||||||||||   |   || | ||| || | |||||||||||||||||||||||||||||||    
T  12080838 aaaaaataagtgggtgtgttctagcaaatcctataggcatttgctagaatacacccacttattttttagaatgagtattt 12080759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 23740160 - 23740247
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||| |||||||||||||||| |||| ||| ||||| || || || ||  | |||||||| | ||||||||||||||||| ||||||    
T  23740160 tacacacacttattttttagaaggagtgttttaacaatattcaccttaaggtgtatttaacaattttttagttatatctttgctaaaa 23740247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 9401782 - 9401644
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||    |   | | ||| |||  ||||||||||||| |||||||| | || ||| | | |||| || || ||    
T  9401782 ctaaaaaataagtgggtgtattctagcaaatgcctataggagttgctaacatacacccacttatattttagaaggtgtgttttagctacattcaccttaa 9401683  T
Q  472 aatatatttaaccactttttagttatatctttactaaaa 510  Q
      | |||||||| ||||||||||||||||||| ||||||    
T  9401682 ggtgtatttaacaactttttagttatatctttgctaaaa 9401644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 401
Target Start/End: Original strand, 41407293 - 41407441
Alignment:
Q  256 atatgtatatgaaatttgctatgatacaactattagtttttacgaagacgtgttttagcagcatacaccttaaagtgtatttagacattatttagttatc 355  Q
    |||| |||||||  |||||||  | ||| ||||||||||||| |  |  |||||||||||   ||||| |||| |||||||||   | | |||||||||     
T  41407293 atatatatatgaggtttgctagaacacacctattagtttttatgtgggagtgttttagcaagctacacattaaggtgtatttaactactttttagttata 41407392  T
Q  356 acgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    || | ||||||||| |   ||||||||||||||||||||||||||||||    
T  41407393 acttgctaaaacacactttctaaaaaataagtgggtgtattctagcaaa 41407441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 2936640 - 2936739
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  2936640 gtgttttagcaagttacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 2936739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 8048022 - 8047923
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| ||||||||||||||||||||||   | | ||||||||| || | |||||||||||| |   |||||  ||||||||| ||||||||||    
T  8048022 gtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaactagtgggtgtgttctagcaaa 8047923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 8048095 - 8048066
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  8048095 ctaaaaaataagtgggtgtattctagcaaa 8048066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 513
Target Start/End: Original strand, 11766247 - 11766332
Alignment:
Q  428 ccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    ||||||||||||||||||| || ||| | |||||| ||  | ||  | |||||||| |||||||| |||||||||| |||||||||    
T  11766247 ccacttattttttagaatgtgtgttttagcaacattcacattaaggtgtatttaacaactttttaattatatctttgctaaaatac 11766332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 12080770 - 12080799
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  12080770 ctaaaaaataagtgggtgtattctagcaaa 12080799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 14770146 - 14770175
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  14770146 ctaaaaaataagtgggtgtattctagcaaa 14770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 14777998 - 14778027
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  14777998 ctaaaaaataagtgggtgtattctagcaaa 14778027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 15220597 - 15220626
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  15220597 ctaaaaaataagtgggtgtattctagcaaa 15220626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 15230136 - 15230165
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  15230136 ctaaaaaataagtgggtgtattctagcaaa 15230165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 20516991 - 20517020
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  20516991 ctaaaaaataagtgggtgtattctagcaaa 20517020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 22479277 - 22479306
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  22479277 ctaaaaaataagtgggtgtattctagcaaa 22479306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 24720332 - 24720361
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  24720332 ctaaaaaataagtgggtgtattctagcaaa 24720361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 25818554 - 25818583
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  25818554 ctaaaaaataagtgggtgtattctagcaaa 25818583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 27812013 - 27812042
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  27812013 ctaaaaaataagtgggtgtattctagcaaa 27812042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 28605513 - 28605542
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  28605513 ctaaaaaataagtgggtgtattctagcaaa 28605542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 32852928 - 32852957
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  32852928 ctaaaaaataagtgggtgtattctagcaaa 32852957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 34986596 - 34986625
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  34986596 ctaaaaaataagtgggtgtattctagcaaa 34986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 38368052 - 38367953
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||| ||||||||||||||    
T  38368052 gtgttttagcaagttacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtggctgtattctagcaaa 38367953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 38876294 - 38876265
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  38876294 ctaaaaaataagtgggtgtattctagcaaa 38876265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 45225331 - 45225360
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  45225331 ctaaaaaataagtgggtgtattctagcaaa 45225360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 45225464 - 45225493
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  45225464 ctaaaaaataagtgggtgtattctagcaaa 45225493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 459
Target Start/End: Complemental strand, 48193252 - 48193207
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||| | |||||||||||||||||||||| |||||||| |||||    
T  48193252 ttgttagaatacacccacttattttttagaaggagtattttaacaa 48193207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 48454671 - 48454642
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  48454671 ctaaaaaataagtgggtgtattctagcaaa 48454642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 14719101 - 14719137
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||||||||||||||||||| |||||||| |||||    
T  14719101 tacacccacttattttttagaaggagtattttaacaa 14719137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 524
Target Start/End: Original strand, 18829699 - 18829747
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatactcttataaaaa 524  Q
    ||||||||||||||||||||||    |||||||||||||||| ||||||    
T  18829699 tatttaaccactttttagttattcacttactaaaatactcttttaaaaa 18829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 459
Target Start/End: Complemental strand, 27812032 - 27811996
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||||||||||||||||||| |||||||| |||||    
T  27812032 tacacccacttattttttagaaggagtattttaacaa 27811996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 401
Target Start/End: Original strand, 32577615 - 32577643
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||||||||||||||||||||    
T  32577615 taaaaaataagtgggtgtattctagcaaa 32577643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 424 - 558
Target Start/End: Original strand, 6660 - 6795
Alignment:
Q  424 acacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac-tcttataaa 522  Q
    ||||||| ||||||||||||| | || ||| | |||||| || || ||| |||||||||| ||||||||||||||||||| |||||| ||  ||||  ||    
T  6660 acacccaattattttttagaaggtgtgttttagcaacattcacctcaaagtatatttaacaactttttagttatatctttgctaaaacacaccttaataa 6759  T
Q  523 aatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    || | |  ||||||||||||||||| ||||||||||    
T  6760 aaactagtgggtgtatcatagcaaacccatatatat 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 4838398 - 4838485
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| ||||| ||  | |||||||| ||||||||||||||||||||||||||    
T  4838398 tacacccacttattttttagaaggtgtgttttagcaacattcatcttaaggtgtatttaacaactttttagttatatctttactaaaa 4838485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 14488415 - 14488502
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||| ||||||||||||||||||||| ||| |||||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  14488415 tacactcacttattttttagaatgagtgttttaacaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 14488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 11742439 - 11742529
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||||||||||||||||| | || ||| | ||| || || || ||||| |||||||| ||||||||||||||||||| |||||||||    
T  11742439 tacacccacttattttttagaaggtgtgttttagcaaaatacaccttaaaatgtatttaacaactttttagttatatctttgctaaaatac 11742529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 4898643 - 4898435
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |   ||||||||||||||||||||| ||||||||    
T  4898643 gtgttttagcaagctacaccttaaggtgtatttaattactttttagttataacttgctaaaacacacattctaaaaaataagtgggtgtatcctagcaaa 4898544  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
        |   | | ||| |||  ||||||||||||||||||| || | || ||| | |||||| || || ||| | |||||||| |||||||||||||||||    
T  4898543 tgcctataggagttgctaacatacacccacttattttttaaaaggtgtgttttagcaacattcaccttaaagtgtatttaacaactttttagttatatct 4898444  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  4898443 ttgctaaaa 4898435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 21969970 - 21969883
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||||||||||    ||||| |||||||| ||||| ||  | |||||||| || |||||||||||||||| ||||||    
T  21969970 tacacccacttattttttagaaattatattttaacaacattcatcttaaggtgtatttaacaacattttagttatatctttgctaaaa 21969883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 426 - 507
Target Start/End: Complemental strand, 11009987 - 11009906
Alignment:
Q  426 acccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttacta 507  Q
    |||||||||||||||||||||||| ||| | |||||| || || ||  |||||||||| |  ||||| ||||||||||||||    
T  11009987 acccacttattttttagaatgagtcttttagcaacattcaccttaaggtatatttaacaatattttaattatatctttacta 11009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 29646228 - 29646314
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  29646228 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 29646314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 31133062 - 31132976
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  31133062 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 31132976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 4898203 - 4898116
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||| ||||||||||||||||| || ||| | |||||| ||||| || || ||||  || ||||||||||||||||| | ||||||    
T  4898203 tacaccaacttattttttagaatgtgtgttttagcaacattcatcttaagatgtattggacaactttttagttatatctatcctaaaa 4898116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 27828412 - 27828451
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtattt 453  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  27828412 ttgttagaatacacccacttattttttagaatgagtattt 27828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 15962847 - 15962877
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  15962847 tacacccacttattttttagaatgagtattt 15962877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 5187830 - 5187915
Alignment:
Q  374 aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaa 459  Q
    ||||||||||||||||| ||||||||||   |   || | ||| || | ||||||||||||||||||||| ||||||||| |||||    
T  5187830 aaaaaataagtgggtgtgttctagcaaaacctacaggcatttgctagaatacacccacttattttttagattgagtattttaacaa 5187915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 5187898 - 5187869
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  5187898 ctaaaaaataagtgggtgtattctagcaaa 5187869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 8171945 - 8171974
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  8171945 ctaaaaaataagtgggtgtattctagcaaa 8171974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 9955924 - 9955895
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  9955924 ctaaaaaataagtgggtgtattctagcaaa 9955895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 14488364 - 14488393
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  14488364 ctaaaaaataagtgggtgtattctagcaaa 14488393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 29646363 - 29646461
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   ||| ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  29646363 gtgttatagcaacatacaccttaaggtgtatttattaatt-tttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 29646461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 514
Target Start/End: Complemental strand, 32889761 - 32889671
Alignment:
Q  422 ttacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatact 514  Q
    ||||| ||||||| |||||||||||||| ||  | |||||||||| | ||  | |||||||||||  |||||||||||||||  |||||||||    
T  32889761 ttacatccacttagtttttagaatgagtgttatagcaacatgcattttaaggtgtatttaaccac--tttagttatatctttgttaaaatact 32889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 33730587 - 33730616
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  33730587 ctaaaaaataagtgggtgtattctagcaaa 33730616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 4184445 - 4184359
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||| ||||||||||||||||    
T  4184445 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaa 4184359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 9955905 - 9955941
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaa 459  Q
    |||||||||||||||||||||| |||||||| |||||    
T  9955905 tacacccacttattttttagaaagagtattttaacaa 9955941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 15962923 - 15962841
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctag 397  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||   ||||||||||||||||||||||||||    
T  15962923 tacaccttaaggtgtatttaaccactttttagttatacacttgctaaaatactcattctaaaaaataagtgggtgtattctag 15962841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 27828497 - 27828411
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||   ||||||||||||||||||||||||| ||||    
T  27828497 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtattctaacaaa 27828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 401
Target Start/End: Complemental strand, 32889665 - 32889637
Alignment:
Q  373 taaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||||||||||||||||||||    
T  32889665 taaaaaataagtgggtgtattctagcaaa 32889637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 513
Target Start/End: Original strand, 8814839 - 8814978
Alignment:
Q  374 aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaa 473  Q
    ||||||||||||||||||||||||||||   ||   | | ||| |||  |||||||||||||||||||||||| || ||| | |||||| || || |  |    
T  8814839 aaaaaataagtgggtgtattctagcaaatgcttatagaagttgctaacatacacccacttattttttagaatgtgtgttttagcaacattcaccttagga 8814938  T
Q  474 tatatttaaccactttttagttatatctttactaaaatac 513  Q
    | |||||||| | ||||||||||||||||| |||||||||    
T  8814939 tgtatttaacaattttttagttatatctttgctaaaatac 8814978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 36824065 - 36824152
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||||| || ||| |||||||| ||||| ||  | |||||||| |||||||| |||||||||| ||||||    
T  36824065 tacacccacttattttttagaatgtgtgttttaacaacattcatcttaaggtgtatttaacaactttttaattatatctttgctaaaa 36824152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 3800298 - 3800394
Alignment:
Q  414 ttgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||  |||||||||||||||||||||| | |||||| | |||||| || || || || |||||||| |||||||||||||||| || ||||||    
T  3800298 ttgttaacatacacccacttattttttagaaggtgtattttagcaacattcaccttaagatgtatttaacaactttttagttatatcattgctaaaa 3800394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 12127651 - 12127738
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  12127651 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 12127738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 346 - 515
Target Start/End: Complemental strand, 48765375 - 48765200
Alignment:
Q  346 tttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttag 442  Q
    ||||||||| || ||||||||||| |||   ||||||||| |||||||||| ||||||| ||     | | |||||||  |||||||||||||||| |||    
T  48765375 tttagttataacttactaaaacacaccttctaaaaaataaatgggtgtattttagcaaatatccataggagttgttaacatacacccacttattttgtag 48765276  T
Q  443 aatgagtatttcaa---caacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatactc 515  Q
    || | || ||| |    |||||| || || || || |||||||| |||||||||||||||||||||||||| ||||    
T  48765275 aaagtgtgttttagtagcaacattcaccttaagatgtatttaacaactttttagttatatctttactaaaacactc 48765200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 515
Target Start/End: Complemental strand, 50913133 - 50912990
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||| ||||||||||||||||||||||    ||  | | ||| |||  |||||||| ||||||||||||||  || ||| | |||||| || || ||    
T  50913133 ctaaaaattaagtgggtgtattctagcaaatgcctgtaggagttgctaacatacacccatttattttttagaatatgtgttttatcaacattcaccttaa 50913034  T
Q  472 aatatatttaaccactttttagttatatctttactaaaatactc 515  Q
      | |||||||| ||||||||||||||| ||| |||||||||||    
T  50913033 ggtgtatttaacaactttttagttatatttttgctaaaatactc 50912990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 511
Target Start/End: Complemental strand, 53467484 - 53467345
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||    | |   | ||| |||  |||||| |||||| |||||||||| || ||| | |||||| || || ||    
T  53467484 ctaaaaaataagtgggtgtattctagcaaatgcctacatgagttgctaacatacaccaacttatattttagaatgtgtgttttagcaacatccaccttaa 53467385  T
Q  472 aatatatttaaccactttttagttatatctttactaaaat 511  Q
      | |||||||| ||||||||||||||||||| |||||||    
T  53467384 ggtgtatttaacaactttttagttatatctttgctaaaat 53467345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 8815098 - 8815188
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||||||||||||||||| | || ||| | |||||| || || |  || |||||||| | ||||||||||||||||| |||||||||    
T  8815098 tacacccacttattttttagaacgtgtgttttagcaacattcaccttaggatgtatttaacaattttttagttatatctttgctaaaatac 8815188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 6109216 - 6109117
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| ||||||||||||||||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  6109216 gtgttatagcaacatacaccttaaagtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 6109117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 369 - 510
Target Start/End: Complemental strand, 22894682 - 22894542
Alignment:
Q  369 ctcctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatct 468  Q
    |||||||||||||||||||||||| ||||||||  |||   | | ||| |||  |||||||||||||||||||| ||| || ||| | |||||| ||  |    
T  22894682 ctcctaaaaaataagtgggtgtatcctagcaaatgtttataggagttgctaacatacacccacttattttttag-atgtgtgttttagcaacattcactt 22894584  T
Q  469 aaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
     ||  | |||||||| | ||||||||||||||||| ||||||    
T  22894583 taaggtgtatttaacaattttttagttatatctttgctaaaa 22894542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 7848535 - 7848621
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  7848535 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 7848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 33837892 - 33837804
Alignment:
Q  423 tacacccacttatttttt-agaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||| |||| | || ||| | |||||| || || || || |||||||| ||||||||||||||||||| ||||||    
T  33837892 tacacccacttatttttttagaaggtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctttgctaaaa 33837804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 45059719 - 45059633
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||  || | ||||||||| ||| | |||||| ||||   ||||||||||||||||||||| ||||||||    
T  45059719 tacaccttaaagtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataagtgggtgtatcctagcaaa 45059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 499
Target Start/End: Original strand, 53581669 - 53581745
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatat 499  Q
    |||||||||||||||||||||||| || ||| | |||||| || || ||  | |||||||| |||||||||||||||    
T  53581669 tacacccacttattttttagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatat 53581745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 13349245 - 13349332
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||| |||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  13349245 tacacccacttatattttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 13349332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 453
Target Start/End: Original strand, 45059643 - 45059673
Alignment:
Q  423 tacacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||||    
T  45059643 tacacccacttattttttagaatgagtattt 45059673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 994774 - 994675
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| |||||||||||||||||| |||||||||   | | ||||||||| || |  ||||||||||| |   |||||| ||||||||| ||||||||||    
T  994774 gtgttatagcagcatacaccttaaggtgtatttattaactttttagttataacttgttaaaacactcccacataaaaattagtgggtgtgttctagcaaa 994675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 994851 - 994822
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  994851 ctaaaaaataagtgggtgtattctagcaaa 994822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 6114846 - 6114875
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  6114846 ctaaaaaataagtgggtgtattctagcaaa 6114875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 6114924 - 6115023
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  6114924 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 6115023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 17226254 - 17226155
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  17226254 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 17226155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 17226304 - 17226275
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  17226304 ctaaaaaataagtgggtgtattctagcaaa 17226275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 21727710 - 21727739
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  21727710 ctaaaaaataagtgggtgtattctagcaaa 21727739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 26152562 - 26152463
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  26152562 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 26152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 31039760 - 31039661
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacac---tcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | |||||||||   | ||||||||||||||||||||| ||||||||    
T  31039760 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacatcttctaaaaaataagtgggtgtatcctagcaaa 31039661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 32203212 - 32203241
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  32203212 ctaaaaaataagtgggtgtattctagcaaa 32203241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 2868350 - 2868264
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | |||| |||| ||| | |||||||||||   ||||||||||||||||||||| ||||||||    
T  2868350 tacaccttaaggtgtatttaaccactttttatttattcacttgctaaaacactcattctaaaaaataagtgggtgtatcctagcaaa 2868264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 4043636 - 4043722
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||| ||||||||||||||||    
T  4043636 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaa 4043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 6109351 - 6109265
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||   ||||||||||| ||||||||||||||||||    
T  6109351 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactcattctaaaaaataaatgggtgtattctagcaaa 6109265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 6748836 - 6748750
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   |||||| |||||||||||||||||||||    
T  6748836 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaagaagtgggtgtattctagcaaa 6748750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 11460158 - 11460244
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   |||||||||||||||| |||||||||||    
T  11460158 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgcattctagcaaa 11460244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 26158419 - 26158333
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||| ||||||||||||||||    
T  26158419 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtaggtgtattctagcaaa 26158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 510
Target Start/End: Complemental strand, 29239665 - 29239589
Alignment:
Q  434 attttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||| ||| | |||||| || || ||  | ||||||||  |||||||||||||||||| ||||||    
T  29239665 attttttagaatgagtgttttagcaacattcaccttaaggtgtatttaacagctttttagttatatctttgctaaaa 29239589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 453
Target Start/End: Original strand, 51148124 - 51148152
Alignment:
Q  425 cacccacttattttttagaatgagtattt 453  Q
    |||||||||||||||||||||||||||||    
T  51148124 cacccacttattttttagaatgagtattt 51148152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 558
Target Start/End: Original strand, 28704470 - 28704606
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaatac-tcttataa 521  Q
    ||||| || ||||||||||||||| || ||| |||||||| || || ||  | |||||||| ||||||||||||||||||| |||||| ||  ||| |||    
T  28704470 tacactcatttattttttagaatgtgtgttttaacaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaacacaccttctaa 28704569  T
Q  522 aaatcaaacgggtgtatcatagcaaatccatatatat 558  Q
    | |  ||| || |||||||||||||| ||||||||||    
T  28704570 agaataaatggatgtatcatagcaaacccatatatat 28704606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 462
Target Start/End: Complemental strand, 9005275 - 9005160
Alignment:
Q  347 ttagttatcacgtactaaaacactcctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatg 446  Q
    |||||||| || | |||||||||| ||||||||||||| |||||||| |||||||   ||| || | ||| ||| |||||||||| |||| ||||||||     
T  9005275 ttagttatgacatgctaaaacacttctaaaaaataagtaggtgtattttagcaaatgattgtgggagttgctaacttacacccacatattatttagaata 9005176  T
Q  447 agtatttcaacaacat 462  Q
    ||| ||| ||||||||    
T  9005175 agtgttttaacaacat 9005160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 506
Target Start/End: Complemental strand, 36389534 - 36389451
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttact 506  Q
    |||||||||||||||||||||| | || ||| | |||||| || || || || |||||||| ||||||||||||||||||||||    
T  36389534 tacacccacttattttttagaaggtgtgttttagcaacattcaccttaagatgtatttaacaactttttagttatatctttact 36389451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 20201775 - 20201688
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||||||| |||| || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  20201775 tacacccacttattttttataatgtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 20201688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 28454825 - 28454912
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||| |||||||||| | || ||| | |||||| || || || || |||||||| ||||||||||||||||||| ||||||    
T  28454825 tacacccactttttttttagaaggtgtgttttagcaacattcagcttaagatgtatttaacaactttttagttatatctttgctaaaa 28454912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 510
Target Start/End: Complemental strand, 13157358 - 13157269
Alignment:
Q  423 tacacccacttatttttt--agaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    ||||||||||||||||||  ||||| ||| ||| | |||||| || || ||| | |||||||| ||||||||||||||||||| ||||||    
T  13157358 tacacccacttattttttttagaattagtgttttagcaacattcaccttaaagtgtatttaacaactttttagttatatctttgctaaaa 13157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 28764745 - 28764537
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactc---ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||| ||| || |||  ||||| ||||| || | ||||||||| || | |||||||| ||   ||||||||||||||| |||||| || | ||    
T  28764745 gtgttttagcaacatgcatctttgagtgtgtttagccactttttagttatgacttgctaaaacaatcattctaaaaaataagtggatgtattttatccaa 28764646  T
Q  402 gatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatct 501  Q
       | | || | ||| ||| ||||||||||||||||||||||||| || ||| | |||||| ||  | ||  | |||||||| | |||||||||||||||    
T  28764645 tgctcgtgggagttgataacttacacccacttattttttagaatgtgtgttttagcaacattcacattaaggtgtatttaacaattttttagttatatct 28764546  T
Q  502 ttactaaaa 510  Q
    || ||||||    
T  28764545 ttgctaaaa 28764537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 12864294 - 12864380
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||||||||    
T  12864294 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttttaaaaaataagtgggtgtattctagcaaa 12864380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 374 - 462
Target Start/End: Original strand, 28182204 - 28182292
Alignment:
Q  374 aaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacat 462  Q
    ||||||||||| |||||||| |||||||   ||| || | ||| ||| |||| ||||||||||||||||||||||| |||  |||||||    
T  28182204 aaaaaataagttggtgtattttagcaaatgcttgtgggagttgctaacttacgcccacttattttttagaatgagtgttttgacaacat 28182292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 32716408 - 32716494
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| |||||||| ||||||    |||||||||||||||||||||||||||    
T  32716408 tacaccttaaggtgtatttaaccactttttagttattcacttactaaaatactccttcttaaaaataagtgggtgtattctagcaaa 32716494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 503
Target Start/End: Original strand, 32156052 - 32156183
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaagatttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaa 471  Q
    ||||||||||||||||||||||||||||||    | | | | ||| |||  ||||||||||||||||||||||   || ||| | |||||| ||||| ||    
T  32156052 ctaaaaaataagtgggtgtattctagcaaatgcatacaggagttgctaacatacacccacttattttttagaaacggtgttttagcaacattcatcttaa 32156151  T
Q  472 aatatatttaaccactttttagttatatcttt 503  Q
      |  ||||||| | |||||||||||||||||    
T  32156152 ggtgcatttaacaattttttagttatatcttt 32156183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 23413636 - 23413842
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcctaaaa-aataagtgggtgtattctagcaaaga 403  Q
    |||||||||||   |||||||||| |||||||||  || | ||||||||| |  | ||||| ||| ||||||| ||||||||| ||||||||||||||      
T  23413636 gtgttttagcaagctacaccttaaggtgtatttaaccactttttagttataaattcctaaagcacacctaaaaaaataagtggatgtattctagcaaatg 23413735  T
Q  404 tttgcggtaattgttaaattacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatcttt 503  Q
    ||    | | ||| |||  ||||||||||| | |||||||||| || ||| | |||||| || || ||  | |||||||| | ||||||||||||| |||    
T  23413736 ttcataggagttgctaacatacacccacttgtattttagaatgtgtgttttagcaacattcaccttaaggtgtatttaacaattttttagttatatattt 23413835  T
Q  504 actaaaa 510  Q
     ||||||    
T  23413836 gctaaaa 23413842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 510
Target Start/End: Complemental strand, 26843072 - 26842986
Alignment:
Q  424 acacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||| |||||||| || ||| | ||| || || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  26843072 acacccacttatttattagaatgtgtgttttagcaatattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 26842986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Complemental strand, 463040 - 463003
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  463040 tatttaacaactttttagttatatctttgctaaaatac 463003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 463509 - 463410
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  463509 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 463410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 13157756 - 13157657
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  13157756 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 13157657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 14387526 - 14387497
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  14387526 ctaaaaaataagtgggtgtattctagcaaa 14387497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 20411245 - 20411146
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||   | | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  20411245 gtgttatagcaacatacaccttaaggtgtatttattaactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 20411146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Complemental strand, 20411323 - 20411294
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  20411323 ctaaaaaataagtgggtgtattctagcaaa 20411294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 27389546 - 27389575
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  27389546 ctaaaaaataagtgggtgtattctagcaaa 27389575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 513
Target Start/End: Complemental strand, 27787867 - 27787830
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaatac 513  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  27787867 tatttaacaactttttagttatatctttgctaaaatac 27787830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 27787997 - 27787898
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  27787997 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 27787898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Original strand, 32374670 - 32374743
Alignment:
Q  299 gaagacgtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcc 372  Q
    ||||| ||||| ||||| |||||||||||| |||||||||   ||| ||||||||| || | ||||||||||||    
T  32374670 gaagatgtgttatagcaacatacaccttaaggtgtatttattaattttttagttataacttgctaaaacactcc 32374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 34515327 - 34515228
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||||||| ||||    
T  34515327 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttttaaaaaataagtgggtgtattctaacaaa 34515228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 401
Target Start/End: Original strand, 51431915 - 51431944
Alignment:
Q  372 ctaaaaaataagtgggtgtattctagcaaa 401  Q
    ||||||||||||||||||||||||||||||    
T  51431915 ctaaaaaataagtgggtgtattctagcaaa 51431944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 3273452 - 3273540
Alignment:
Q  423 tacacccacttatttttt-agaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||||||||||||| |||||||||  || | |||||| || || ||  | |||||||| | ||||||||||||||||| ||||||    
T  3273452 tacacccacttatttttttagaatgagtgctttagcaacatccaccttaaggtgtatttaacaattttttagttatatctttgctaaaa 3273540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 13943445 - 13943359
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||||||||||||||| ||||    
T  13943445 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgggtgtattctaacaaa 13943359  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 16960465 - 16960379
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   |||||||||||| |||||||||||||||    
T  16960465 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagtgagtgtattctagcaaa 16960379  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 401
Target Start/End: Complemental strand, 39424451 - 39424365
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  || | ||||||||| ||| | |||||| ||||||   ||||||||||| ||||||||||||||||    
T  39424451 tacaccttaaggtgtatttaaccactttttagttattcacttgctaaaatactccttctaaaaaataagttggtgtattctagcaaa 39424365  T

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Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 20817 - 20608
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaaca---ctcctaaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||  ||||||||||| |||||||||   | | ||||||||| || | ||||||||   || ||||||||||||||||||||| ||||||||    
T  20817 gtgttttagcaagatacaccttaaggtgtatttaactactttttagttataacttgctaaaacataccttctaaaaaataagtgggtgtatcctagcaaa 20718  T
Q  402 gatttgcggtaattgttaaattacacccactta-ttttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatc 500  Q
        |   | | ||| |||  |||||||||||| |||||||||| | || ||| | |||||| ||||| ||  | |||||||| |||||||||||||||     
T  20717 tgcctataggagttgctaacatacacccacttatttttttagaaggtgtgttttagcaacattcatcttaaggtgtatttaacaactttttagttatatt 20618  T
Q  501 tttactaaaa 510  Q
    ||| ||||||    
T  20617 tttgctaaaa 20608  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 401
Target Start/End: Original strand, 58042 - 58141
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactccta---aaaaataagtgggtgtattctagcaaa 401  Q
    ||||| ||||| |||||||||||| |||||||||  || | ||||||||| || | |||||||||||| |   |||||| ||||||||| ||||||||||    
T  58042 gtgttatagcaacatacaccttaaggtgtatttattcactttttagttataacttgctaaaacactcccacataaaaattagtgggtgtgttctagcaaa 58141  T

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Target: scaffold0068; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 57907 - 57993
Alignment:
Q  319 tacaccttaaagtgtatttagacattatttagttat-cacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||| |||||||||  |||| ||||||||| ||  | |||||| ||||||   ||||||||||||||||||||||||||||    
T  57907 tacaccttaaggtgtatttaaccattttttagttattcatttgctaaaatactccttctaaaaaataagtgggtgtattctagcaaa 57993  T

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Target: scaffold0627 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 510
Target Start/End: Original strand, 4179 - 4266
Alignment:
Q  423 tacacccacttattttttagaatgagtatttcaacaacatgcatctaaaaatatatttaaccactttttagttatatctttactaaaa 510  Q
    |||| ||||||||||||||||| | || ||| | |||||| || || ||  | |||||||| ||||||||||||||||||| ||||||    
T  4179 tacatccacttattttttagaaggtgtgttttagcaacattcaccttaaggtgtatttaacaactttttagttatatctttgctaaaa 4266  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 476 - 510
Target Start/End: Complemental strand, 9755 - 9721
Alignment:
Q  476 tatttaaccactttttagttatatctttactaaaa 510  Q
    |||||||| ||||||||||||||||||||||||||    
T  9755 tatttaacaactttttagttatatctttactaaaa 9721  T

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Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 401
Target Start/End: Complemental strand, 9930 - 9831
Alignment:
Q  305 gtgttttagcagcatacaccttaaagtgtatttagacattatttagttatcacgtactaaaacactcct---aaaaaataagtgggtgtattctagcaaa 401  Q
    |||||||||||   |||||||||| |||||||||   | | ||||||||| || | ||||||||| |||   ||||||||||||||||||| ||||||||    
T  9930 gtgttttagcaagctacaccttaaggtgtatttaactactttttagttataacttgctaaaacacaccttctaaaaaataagtgggtgtatcctagcaaa 9831  T

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