View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1148_low_70 (Length: 294)
Name: NF1148_low_70
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1148_low_70 |
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Alignment Details
Target: chr2 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 138 - 286
Target Start/End: Complemental strand, 33717693 - 33717547
Alignment:
| Q |
138 |
ataacttcgccatcaactcctcaaattcatatttcaacccacaaatagtaatggatccacacacaatgtaaacaaattataaaatgtaactaacatagac |
237 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
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| T |
33717693 |
ataacttccccatcaactcctcaaattcatatttcaacccacaaatagtaatggatccacaaa--atgtaaacaaattataaaatgtaactaacatagac |
33717596 |
T |
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| Q |
238 |
tatttcaaagaatttacacatgttttgcacagaatcacaattagttcat |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33717595 |
tatttcaaagaatttacacatgttttgcacagaatcacaattagttcat |
33717547 |
T |
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