View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1148_low_76 (Length: 263)
Name: NF1148_low_76
Description: NF1148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1148_low_76 |
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Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48258657 - 48258796
Alignment:
| Q |
1 |
actctatgcatgtcatgagtgagttaaatcataaaggcttggccggagacgttttatgccctagatgtgccaataaagtggaaattgtgaactatcttta |
100 |
Q |
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| T |
48258657 |
actctatgcatgtcatgagtgagttaaatcataaaggcttggccggagacgttttatgccctagatgtgccaataaagtggaaattgtgaactatcttta |
48258756 |
T |
|
| Q |
101 |
catggaaggtgattttggtatgaaggcttggtttggatct |
140 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
48258757 |
catggaaggtgattttggtatgaaggcttggtttggatct |
48258796 |
T |
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