View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11491_high_9 (Length: 365)
Name: NF11491_high_9
Description: NF11491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11491_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 27 - 348
Target Start/End: Original strand, 42657610 - 42657952
Alignment:
| Q |
27 |
gaacaataataaaatttgtcattgatcattaaaattcgatcatccttaaatagcagaaaaatattgggtatcaatcataacaaatagcaaaagataaccc |
126 |
Q |
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| T |
42657610 |
gaacaataataaaatttgtcattgatcattaaaattcgatcatccttaaatagcagaaaaatattgggtatcaatcataacaaatagcaaaagataaccc |
42657709 |
T |
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| Q |
127 |
aaactagaaatcaaagcttaaggacaagttcaccaacatctcaattgaaatccatca---------------ggattcaaggacgattagaacc------ |
205 |
Q |
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| T |
42657710 |
aaactagaaatcaaagcttaaggacaagttcaccaacatctcaattgaaatccatcactcactgtatggatgggattcaaggacgattagaaccaaaata |
42657809 |
T |
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| Q |
206 |
aaaataaaaataaaagctcatgttcttgttcatgtacaaaaagtcaagattctaaacaaaagctctctccaacaaaggagccaaaacgacgacgttttcc |
305 |
Q |
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| T |
42657810 |
aaaataaaaataaaaataaaagctcatgttcatgtacaaaaagtcaagattctaaacaaaagctctctccaacaaaggagccaaaacgacgacgttttcc |
42657909 |
T |
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| Q |
306 |
ttttccttgcaagactctaacaaagtcacctcagagagcatct |
348 |
Q |
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| T |
42657910 |
ttttccttgcaagactctaacaaagtcacctcagagagcatct |
42657952 |
T |
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