View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11491_low_3 (Length: 594)
Name: NF11491_low_3
Description: NF11491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11491_low_3 |
 | |
|
| [»] scaffold0514 (1 HSPs) |
| | |
|
| [»] scaffold0470 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0514 (Bit Score: 549; Significance: 0; HSPs: 1)
Name: scaffold0514
Description:
Target: scaffold0514; HSP #1
Raw Score: 549; E-Value: 0
Query Start/End: Original strand, 1 - 577
Target Start/End: Complemental strand, 930 - 354
Alignment:
| Q |
1 |
gaggttcaacggaaaccgtatcgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggacaa |
100 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
930 |
gaggttcaacagaaaccgcaccgaataaggaatcaaagaaaggatggagaaatgtattagagaagatacggagttggttgtcctacaaagatagggacaa |
831 |
T |
|
| Q |
101 |
atggttggacgatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830 |
atggttggaggatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
731 |
T |
|
| Q |
201 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
730 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttg |
631 |
T |
|
| Q |
301 |
tctacgacaaaattctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
630 |
tctacgacaaaattctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgc |
531 |
T |
|
| Q |
401 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
530 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
431 |
T |
|
| Q |
501 |
cttgcttattcttatttaatagctgcggtaatgacaaccccagatagtgtttatgttcgagctaccgaagttgttaa |
577 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
430 |
cttgcttattcttatttaatagctgcggtaatgacaaccccaaatagtgtttatgttcgagctaccgaagttgttaa |
354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 493; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 1 - 577
Target Start/End: Original strand, 6595480 - 6596056
Alignment:
| Q |
1 |
gaggttcaacggaaaccgtatcgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggacaa |
100 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6595480 |
gaggttcaacagaaaccgcaccgaataaggaatcaaagaaaggatggagaaaggtaatagagaagatacggagttggttgtcctacaaaaacaaggacaa |
6595579 |
T |
|
| Q |
101 |
atggttggacgatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6595580 |
atggttggaggatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
6595679 |
T |
|
| Q |
201 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
6595680 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccagtactaacgcaaatccaccagatgccgacaattatgacaaaatttgtacttttg |
6595779 |
T |
|
| Q |
301 |
tctacgacaaaattctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgc |
400 |
Q |
| |
|
||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6595780 |
tctacaaagaacgtctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttgagttccttatttcgaacacaatttgttttattgc |
6595879 |
T |
|
| Q |
401 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6595880 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcaatagggatgtgggtcactctcacaagc |
6595979 |
T |
|
| Q |
501 |
cttgcttattcttatttaatagctgcggtaatgacaaccccagatagtgtttatgttcgagctaccgaagttgttaa |
577 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6595980 |
cttgattattcttatttaatagctgcggtaatgacaatcccagatagtgtttatgttcgagctaccgaagttgttaa |
6596056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 1 - 577
Target Start/End: Original strand, 6621294 - 6621870
Alignment:
| Q |
1 |
gaggttcaacggaaaccgtatcgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggacaa |
100 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6621294 |
gaggttcaacagaaaccgcactgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagtcagggacaa |
6621393 |
T |
|
| Q |
101 |
atggttggacgatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6621394 |
atggttggaggatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
6621493 |
T |
|
| Q |
201 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||| |
|
|
| T |
6621494 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccagtaccaacgcaaatccaccagaagccgacaattatgacaaaatttgtacttttg |
6621593 |
T |
|
| Q |
301 |
tctacgacaaaattctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgc |
400 |
Q |
| |
|
||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
6621594 |
tctacaaagaacgtctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcggttccttatttcgaacacaatttgttttattgc |
6621693 |
T |
|
| Q |
401 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6621694 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
6621793 |
T |
|
| Q |
501 |
cttgcttattcttatttaatagctgcggtaatgacaaccccagatagtgtttatgttcgagctaccgaagttgttaa |
577 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||||| ||||| |||||| || |||||||||||||||||| |
|
|
| T |
6621794 |
cttgcttattcttatttaacagctgcgataatgaccaccccggatagagtttattttgaagctaccgaagttgttaa |
6621870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 29 - 577
Target Start/End: Original strand, 6840855 - 6841403
Alignment:
| Q |
29 |
ggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggacaaatggttggacgatatgagagggaacttg |
128 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
6840855 |
ggaaccaaagaaaggttggagaaaggtattagaagggatagggagttggttgtcctacaaagacaaggagaaatggttggatgatatgcgagggaacttg |
6840954 |
T |
|
| Q |
129 |
ggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcgattaaagatggggaaaatccacccagta |
228 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| | |||||||| ||| |
|
|
| T |
6840955 |
ggcttaatagcgacagtcatcgcaacaatgacatttcaaatggttttaaatccgcccggtggtgttatgtcgattaaagatggcacagatccacccggta |
6841054 |
T |
|
| Q |
229 |
ccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttgtctacgacaaaattctatgtccaggtga |
328 |
Q |
| |
|
|| |||||| ||||||| |||||||||||||||||||||||||| || || |||||||| |||||||||| |||||| | || ||||||||| ||||| |
|
|
| T |
6841055 |
ccaacgcaaatccacccagtaccaacgcaaatccaccagatgccgacgattctgacaaaaattgtacttttatctacggcgaacgtctatgtccgggtga |
6841154 |
T |
|
| Q |
329 |
agctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgcatcactaagtgtttgtctcttgctggtg |
428 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||| |
|
|
| T |
6841155 |
agctgtcttagccgttggggactcttatggatattttcagttccttatttccaacacaatttgttttgttgcatcactaagtatttgtctcttgcttgtg |
6841254 |
T |
|
| Q |
429 |
agtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagccttgcttattcttatttaatagctgcgg |
528 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
6841255 |
agtggaattcctttaaatcacaggtttcttatgtggcttttatcaatagggatgtgggtcactctcacaagccttgcttattcttatttaacagctgtgt |
6841354 |
T |
|
| Q |
529 |
taatgacaaccccagatagtgtttatgttcgagctaccgaagttgttaa |
577 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||||| |||||||||| |
|
|
| T |
6841355 |
taatgaccaccccaaatagtgtttatgttgaagctacaaaagttgttaa |
6841403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 3 - 227
Target Start/End: Original strand, 6811371 - 6811598
Alignment:
| Q |
3 |
ggttcaacggaaaccgtatcgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggac---a |
99 |
Q |
| |
|
||||||| ||||||| | ||||| ||||| |||||||||| |||||||||| |||||| |||| ||||||| |||| |||||||||| ||| | |
|
|
| T |
6811371 |
ggttcaatagaaaccgcagcgaatgaggaaccaaagaaaggttggagaaaggcattagaagggatagagagttgggtgtcatacaaagacaaggaggata |
6811470 |
T |
|
| Q |
100 |
aatggttggacgatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtc |
199 |
Q |
| |
|
|||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| ||| |
|
|
| T |
6811471 |
aatggtgggatgatatgagagggaactttggtttaatagcaacagtcatcgcaacaatgacatttcaaatggttttaaatccacctggtggcattaggtc |
6811570 |
T |
|
| Q |
200 |
gattaaagatggggaaaatccacccagt |
227 |
Q |
| |
|
||| ||||||| | ||||||||||||| |
|
|
| T |
6811571 |
gatgaaagatgacgcaaatccacccagt |
6811598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 474 - 577
Target Start/End: Original strand, 6788645 - 6788748
Alignment:
| Q |
474 |
ttagggatgtgggtcactctcacaagccttgcttattcttatttaatagctgcggtaatgacaaccccagatagtgtttatgttcgagctaccgaagttg |
573 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||| |||||| || |||||||||||||| |
|
|
| T |
6788645 |
ttagggatgtgggtcactctcacaagccttgcttattcttatttaacagctgcgataatgaccaccccggatagagtttattttgaagctaccgaagttg |
6788744 |
T |
|
| Q |
574 |
ttaa |
577 |
Q |
| |
|
|||| |
|
|
| T |
6788745 |
ttaa |
6788748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 506
Target Start/End: Complemental strand, 6849966 - 6849828
Alignment:
| Q |
368 |
gttccttatttcgaacacaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggctt |
467 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||| | ||||||| ||||| | ||||||| | |
|
|
| T |
6849966 |
gttccttatatcaaacacaatttgttttgttgcatcactaagtatttgtctcttgcttgtgagtggaattcgtttgcatcataggttacctatgtggatg |
6849867 |
T |
|
| Q |
468 |
ttatcattagggatgtgggtcactctcacaagccttgct |
506 |
Q |
| |
|
||| || |||||||||| | ||||||||||| |||||| |
|
|
| T |
6849866 |
ttagcaatagggatgtgtataactctcacaagtcttgct |
6849828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 524
Target Start/End: Original strand, 6811718 - 6811874
Alignment:
| Q |
368 |
gttccttatttcgaacacaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggctt |
467 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||| | ||||| |||| || || |||||||| | | | | |||||| | |||||||||| |
|
|
| T |
6811718 |
gttccttatttccaacacaatttgttttattggatcactaattatttgtatcttcctagtttctggaattcgtgtccgtggcaggttacctatgtggctt |
6811817 |
T |
|
| Q |
468 |
ttatcattagggatgtgggtcactctcacaagccttgcttattcttatttaatagct |
524 |
Q |
| |
|
||||| ||||| ||| |||||||| |||||||| | ||||||| |||||||| |
|
|
| T |
6811818 |
ttatcggtagggtcgtgtatcactctctcaagccttagtagttcttatataatagct |
6811874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 6658835 - 6658893
Alignment:
| Q |
384 |
acaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctat |
442 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||||||||| || |||||||||||||| |
|
|
| T |
6658835 |
acaatttgtttcattgcatcacttagtgttattctcttgcttgttagtggaattcctat |
6658893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 6739237 - 6739295
Alignment:
| Q |
384 |
acaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctat |
442 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||||||||| || |||||||||||||| |
|
|
| T |
6739237 |
acaatttgtttcattgcatcacttagtgttattctcttgcttgttagtggaattcctat |
6739295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 6749876 - 6749934
Alignment:
| Q |
384 |
acaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctat |
442 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||||||||| || |||||||||||||| |
|
|
| T |
6749876 |
acaatttgtttcattgcatcacttagtgttattctcttgcttgttagtggaattcctat |
6749934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 6756667 - 6756725
Alignment:
| Q |
384 |
acaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctat |
442 |
Q |
| |
|
||||||||||| ||||||||||| |||||| ||||||||| || |||||||||||||| |
|
|
| T |
6756667 |
acaatttgtttcattgcatcacttagtgttattctcttgcttgttagtggaattcctat |
6756725 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 469
Target Start/End: Original strand, 6835815 - 6835915
Alignment:
| Q |
369 |
ttccttatttcgaacacaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttt |
468 |
Q |
| |
|
|||||| ||| ||||||||| ||||| |||||||| |||||||||| |||||||| ||||||| |||| | || ||| |||||| ||||||||||| |
|
|
| T |
6835815 |
ttccttttttggaacacaatatgtttcattgcatcgctaagtgttttactcttgcttatgagtggtattcgtttgagtcataggtttactatgtggcttt |
6835914 |
T |
|
| Q |
469 |
t |
469 |
Q |
| |
|
| |
|
|
| T |
6835915 |
t |
6835915 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 497
Target Start/End: Original strand, 6632663 - 6632782
Alignment:
| Q |
378 |
tcgaacacaatttgttttattgcatcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattag |
477 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||| |||||||| ||||| |||| | || ||| |||||| |||||||||| |||| ||| |
|
|
| T |
6632663 |
tcgaacacaatatgtttcattgcatcacttagtgttttactcttgcttaccagtggtattcgtttgagtcataggtttactatgtggcttgtatctatag |
6632762 |
T |
|
| Q |
478 |
ggatgtgggtcactctcaca |
497 |
Q |
| |
|
||||||| ||||||||||| |
|
|
| T |
6632763 |
ggatgtgtttcactctcaca |
6632782 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 6632481 - 6632531
Alignment:
| Q |
145 |
tcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgtta |
195 |
Q |
| |
|
|||| |||||||| |||||||||||| |||||||||||| |||||||||| |
|
|
| T |
6632481 |
tcatagcaacaataacatttcaaatgggtttaaatccaccgggtggcgtta |
6632531 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0470 (Bit Score: 477; Significance: 0; HSPs: 1)
Name: scaffold0470
Description:
Target: scaffold0470; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 1 - 577
Target Start/End: Original strand, 10712 - 11288
Alignment:
| Q |
1 |
gaggttcaacggaaaccgtatcgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagacagggacaa |
100 |
Q |
| |
|
|||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10712 |
gaggttcaacagaaaccgcactgaataaggaatcaaagaaaggatggagaaaggtattagagaagatacggagttggttgtcctacaaagtcagggacaa |
10811 |
T |
|
| Q |
101 |
atggttggacgatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
200 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10812 |
atggttggaggatatgagagggaacttgggtttaatagcgacagtcatcgcaacaatgacatttcaaatgattttaaatccacccggtggcgttatgtcg |
10911 |
T |
|
| Q |
201 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccggtaccaacgcaaatccaccagatgccaaccgttatgacaaaatttgtacttttg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||| |
|
|
| T |
10912 |
attaaagatggggaaaatccacccagtaccgacgcaagtccacccagtaccaacgcaaatccaccagaagccgacaattatgacaaaatttgtacttttg |
11011 |
T |
|
| Q |
301 |
tctacgacaaaattctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcagttccttatttcgaacacaatttgttttattgc |
400 |
Q |
| |
|
||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11012 |
tctacaaagaacgtctatgtccaggtgaagctgtcttagctgttagggactctagtggatatcttcggttccttatttcgaacacaatttgttttattgc |
11111 |
T |
|
| Q |
401 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11112 |
atcactaagtgtttgtctcttgctggtgagtggaattcctatgcatcacaggtttcttatgtggcttttatcattagggatgtgggtcactctcacaagc |
11211 |
T |
|
| Q |
501 |
cttgcttattcttatttaatagctgcggtaatgacaaccccagatagtgtttatgttcgagctaccgaagttgttaa |
577 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||||| ||||| |||||| || |||||||||||||||||| |
|
|
| T |
11212 |
cttgcttattcttatttaacagctgcgataatgaccaccccggatagagtttattttgaagctaccgaagttgttaa |
11288 |
T |
|
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