View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11493_high_22 (Length: 229)
Name: NF11493_high_22
Description: NF11493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11493_high_22 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 32991719 - 32991931
Alignment:
| Q |
1 |
aaacctcaaatttcttctggtattttaaggataaactcaattggtcatgatgatcttcttgattattcttcacttccacctctcatggatccttcttaca |
100 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32991719 |
aaacctcaaatttcttctggtcttttaaggataaactcaattggtcatgatgatcttcttgattattcttcacttccacctctcatggatccttcttaca |
32991818 |
T |
|
| Q |
101 |
caaatgatgatttcaaaggaattaccacaaatcaacaaatttcatcaactaaatcacaatcagatggatattatcttccaagcttctccatcaacaataa |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32991819 |
caaatgatgatttcaaaggaattaccacaaatcaacaaatttcatcaactaaatcacaatcagatggatattatcttccaagcttctccatcaacaataa |
32991918 |
T |
|
| Q |
201 |
tcaacatcaattt |
213 |
Q |
| |
|
||||||||||||| |
|
|
| T |
32991919 |
tcaacatcaattt |
32991931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University