View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11493_low_17 (Length: 265)
Name: NF11493_low_17
Description: NF11493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11493_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 25897501 - 25897749
Alignment:
| Q |
1 |
tgtagttgaatatatgattgttggaacacatacttcaaagattccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcct |
100 |
Q |
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| T |
25897501 |
tgtagttgaatctatgattgttggaacacatacttcaaagattccattttcaaagtgttgtcgaactagagatttagccaaggtatcaactaatgatcct |
25897600 |
T |
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| Q |
101 |
cagttataattcccttgcttcaagggattaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaacatgaattgtttg |
200 |
Q |
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| T |
25897601 |
cagttataattcccttgcttcaagggattaaaaaatctcaaaaatattgaacaaatcatactctactttttgaaactaaatttgaaatatgaattgtttg |
25897700 |
T |
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| Q |
201 |
attttcatttaatgataattagattcatgaatcatttaaccatgagact |
249 |
Q |
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| T |
25897701 |
attttcatttaatgataattagattcatgaatcatttaaccatgagact |
25897749 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 25897292 - 25897345
Alignment:
| Q |
3 |
tagttgaatatatgattgttggaacacatacttcaaagattccattttcaaagt |
56 |
Q |
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||||||||| | |||||||| ||| ||||||||| |||||||||||||||||| |
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| T |
25897292 |
tagttgaatttgtgattgttataactcatacttcatagattccattttcaaagt |
25897345 |
T |
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