View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11494_low_14 (Length: 323)
Name: NF11494_low_14
Description: NF11494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11494_low_14 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 11048924 - 11048631
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11048924 |
atgtaatgcactcaaaaacattagacaccgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagcactagtt |
11048825 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11048824 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtgataggttaaaca |
11048725 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11048724 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagtaatgttcttct |
11048631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10217016 - 10216723
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||| |
|
|
| T |
10217016 |
atgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtacaaactacaaaggtcaagaatttaaagctctagtt |
10216917 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10216916 |
ttttattacatgaaaaatggaagcttagaacaatggttgcatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
10216817 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
10216816 |
tcattatcgatgttgcttcggcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaagccaagcaatgttcttct |
10216723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 10604694 - 10604981
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
||||||||||||||||| || |||||| | || |||||| | |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10604694 |
atgtaatgcactcaaaactataagacaccggaatttagttcaagttttaacatgttgttctagtacagattacaaaggtcaagaatttaaagctctagtt |
10604793 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||| |||||||||||| | || || |||| |
|
|
| T |
10604794 |
tttgattacatgaaaaatggaagcttagaacaatggttgcatcctgagattttaaatgcagagcctccaacaacgttggaccttggtaaaagatttaaca |
10604893 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgt |
305 |
Q |
| |
|
||||| | ||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||||||||||| |||| ||||| |
|
|
| T |
10604894 |
tcatttttgatgttgcttctgcattgcattatcttcatcaagaatgtgagcaattagtcattcattgtgatctaaagccaagcaatgt |
10604981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 299
Target Start/End: Original strand, 10564969 - 10565250
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
10564969 |
atgtaatgcactcaaaaatattcgacaccgaaatttagttaaggttttaacctgttgttcaagtacagattacaaaggtcaagaatttaaagctctggtt |
10565068 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| | |||| |||||||||| ||| |||||| ||| ||| |
|
|
| T |
10565069 |
tttgagtacatgaaaaatggaagcttagatcaatggttgcatcctgagattttaaatgcagaacccccaacaacattggactttgctcatagattataca |
10565168 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaag |
299 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||| | |||||||||||||||||| |||| |
|
|
| T |
10565169 |
ttattatcgatgttgcttctgcattacattatcttcatagagaatgtgaagaattggtcattcattgtgatctaaagccaag |
10565250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10740966 - 10740673
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| ||||||||| |||| || ||||||||||||||||||||||||||| || ||||||||||| ||| |
|
|
| T |
10740966 |
atgtaatgcactcaaaaatattagacaccgaaatttagttaagattttgacatgttgttctagtacagattacaaaggtcaaacttttaaagctcttgtt |
10740867 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
10740866 |
tttgattacatgaaaaatggaagcttagaacaatggttgcatcttgagattttaaatgcagatcatccaagaacattggaccttggtcatagattaaaca |
10740767 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| | |||||| || |||||||||||||||| || ||||||||||| |||||| | ||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
10740766 |
tcatgaacgatgtcgccactgcattacattatcttcaccaagaatgtgaacaattggtccttcattgtgatctaaagccaagcaatgtccttct |
10740673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10717207 - 10716914
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| || |||||| |||| |||| ||| | ||||| ||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
10717207 |
atgtaatgcactaaaaaatatcagacaccgaaatctagtgaagatattaacatgttgttctagtacagattacaaaggtcaaacttttaaagctctagtt |
10717108 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
10717107 |
tttgattacatgaaaaatggaagcttagaacaatggttgcatcttgagattttaaatgcagatcatccaagaacattggaccttggtcatagattaaaca |
10717008 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| |||||||| || |||||||||||||||| || ||||||||||| ||||| || |||||||||||||| ||| |||| ||||| ||||| |
|
|
| T |
10717007 |
tcatgatcgatgtcgccactgcattacattatcttcaccaagaatgtgaacaattaatcattcattgtgatcttaagccaagcaatgtccttct |
10716914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10747282 - 10746989
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||| |||||| |||||||||||| |||| ||||||||| ||||||| ||||||||||||| ||||||||||| | | || ||||||||||||||| |
|
|
| T |
10747282 |
atgtaatgtactcaagaacattagacaccgaaatttagttaagattttaacgtgttgttctagtatagattacaaagttcaggagtttaaagctctagtt |
10747183 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || |||||||| || || ||||||| |
|
|
| T |
10747182 |
ttttattacataaaaaatggaagcttagaacaatggttgcatcctgagtttttaaatgaagagcatccaaaaacgttagaccttggccacagattaaaca |
10747083 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| || ||||||||||||||||| | ||||| |||||||| ||| |||| ||||| ||||| |
|
|
| T |
10747082 |
tcattatcgatgttgcttcaacattacattatcttcaccaagaatgtgagcaattagtcattcactgtgatctcaagccaagcaatgtccttct |
10746989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 10611652 - 10611939
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||| ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
10611652 |
atgtaatgcactaaaatttattagacaccgaaatttagttaagattttaacatgttgttctagtacagattacaaaggtcaagaatttaaagccctagtt |
10611751 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||| || |||||||||||| ||||||| ||||||| |
|
|
| T |
10611752 |
tttgattacatgaaaaatggaagcttagaacaatggttgcatcccaaggttttaaatgaagagcatacagcaacattggacctcagtcatagattaaaca |
10611851 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgt |
305 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||| ||| | ||||||||||||||| | ||||||||||| ||||| |||| ||||| |
|
|
| T |
10611852 |
tcattatggatgttggttctgcattacattatcttcataatgaatgtgagcaattggtccttcattgtgatataaagccaagcaatgt |
10611939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 18 - 299
Target Start/End: Original strand, 10580946 - 10581226
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
10580946 |
atgtaatgcactcaaaaatattagacaccaaaatttagtcaaggttctaacatgttgttctagtacaaattacaaaggccaagaatttaaagctttagtt |
10581045 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||| | |||| | || || ||||||| ||||||||||||| ||||||| |
|
|
| T |
10581046 |
ttttattacatgaaaaatggaagcttagaacaatggttgcatcctcaga-tttaagtgcagaacctctaacaacattgaaccttggtcatagattaaaca |
10581144 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaag |
299 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | ||| ||||||||||||| |||| |
|
|
| T |
10581145 |
tcattatggatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcgttgtgatctaaagccaag |
10581226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10763400 - 10763107
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| ||| |||| | || ||||||||| ||||||| |||||||||||||| ||||| |||||| |||||||||||||||| ||| |
|
|
| T |
10763400 |
atgtaatgcactaaaaaatattcaacaccggaatttagttaagattttaacatgttgttctagtactgattataaaggtcaagaatttaaagctctggtt |
10763301 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| | || ||| || ||||||| ||||| ||||| ||||||||| |||| ||| || | || | |
|
|
| T |
10763300 |
tttgattacatgaaaaatggaagcttagaacgatggctgcaccctaggaatttaaatgcagagactccaacaacattggatcttgatcaaagactgaata |
10763201 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
10763200 |
tcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttct |
10763107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 10588697 - 10588416
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
||||||||||||||| || ||||||| |||| || | ||| ||||||| ||||||||| |||| ||||| |||||| |||||||||||||| ||||| |
|
|
| T |
10588697 |
atgtaatgcactcaagaatgttagacatcgaaatttggccaagattttaacatgttgttctggtactgattataaaggtcaagaatttaaagctttagtt |
10588598 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| | ||||| || | | |||||||||||||||| ||| |||||||||| |||||| ||||| | |
|
|
| T |
10588597 |
tttgattacatgaaaaatggaagtttagaacaatggcttcatccatggaatgtgaattcagagcatccaagaacgttggaccttgttcatagattaaata |
10588498 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaag |
299 |
Q |
| |
|
||| ||||||| ||||||||||| |||||||||| ||||| ||||||||||| || | ||||||||||| ||||| |||| |
|
|
| T |
10588497 |
tcactatcgatattgcttctgcactacattatcttcatcatgaatgtgagcaggtggtccttcattgtgatataaagccaag |
10588416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 305
Target Start/End: Complemental strand, 19606132 - 19605845
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
||||||||| |||||||| |||||||| |||| ||||||||| ||||||| ||||||||||||| ||| |||||||| |||||| |||||||||||| |
|
|
| T |
19606132 |
atgtaatgctctcaaaaatattagacatcgaaatttagttaagattttaacttgttgttctagtattgataacaaaggtctagaattcaaagctctagtt |
19606033 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||| ||||| | || | ||| |||| ||||||| ||||||| | ||| || || ||||| | |
|
|
| T |
19606032 |
tttgagtacatgagaaatggaagcttagaacaatggttgcatcccgggacaatgaatgcagatcatccaagaacattgaagtttgagcaaagattaaata |
19605933 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgt |
305 |
Q |
| |
|
|| || |||||||| |||||||||||||||| || ||||| ||||||||||||||| | ||||||||||||||||| |||| ||||| |
|
|
| T |
19605932 |
tccttgtcgatgtttcttctgcattacattaccttcatcatgaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgt |
19605845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 305
Target Start/End: Original strand, 10558844 - 10559131
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||| | |||||| ||||||| ||||||||||||| |||||||||||| | ||||| |||||||||||| |
|
|
| T |
10558844 |
atgtaatgcactaaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtt |
10558943 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||| | ||||| ||| | ||| | ||| |||||| |||| | ||||||| ||| ||| || | || | |
|
|
| T |
10558944 |
tttgaatacatgaaaaatggaagcttagaaaactggttgcattcaaggatgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaata |
10559043 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgt |
305 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||||||| |||| ||||| |
|
|
| T |
10559044 |
tcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgt |
10559131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 288
Target Start/End: Complemental strand, 9836595 - 9836325
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| || || |||||| |||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
9836595 |
atgtaatgcactcaaaaatattagacatcgaaatttggtcaaggttataacatgttgttctagtattgattataaaggtggagaatttaaagctttagtt |
9836496 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| || | |||||||| |||| | ||||||| |||||| ||| || |||| | |
|
|
| T |
9836495 |
tttgattacatgaaaaatggaagcttagaacaatggctttatccctggacagtggattcagagtatcctagaacattgaaccttgttcaaagactaaata |
9836396 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgat |
288 |
Q |
| |
|
|| || ||| |||||||||||||||||||||| ||| |||||||||||| || | |||||||||||| |
|
|
| T |
9836395 |
tctccattgatattgcttctgcattacattatcttcattgtgaatgtgagcaagtggtcattcattgtgat |
9836325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 7192947 - 7193240
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||| || |||||| |||| || |||||||| |||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
7192947 |
atgtaatgcactaaaaaatattagacatcgaaatttggttaagattttgacatgttgttccagtacagattacaaaggtcaagaatttaaagctttagtc |
7193046 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagat-tttaaattcagagcatccaaaaacattggaccttggtcataggttaaac |
216 |
Q |
| |
|
||||| |||||||| || |||||||||||||||||| |||||||| |||| | ||| |||| ||| || ||| |||||||||| ||| || || || |
|
|
| T |
7193047 |
tttgaatacatgaacaacggaagcttagaacaatggctacatcct-agatcagtgaatgtagagaatcaaagaacgttggaccttgatcaaagattgaat |
7193145 |
T |
|
| Q |
217 |
atcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||| | | ||| |||| | || ||||||||| || |||| ||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
7193146 |
atcgctgttgatattgcctttgtattacattaccttcatcttgaatgtgagcaatcgatcattcattgtgatctaaagccaagcaatgtccttct |
7193240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 9825042 - 9825261
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||| ||||||||| |||||||| |||| || |||||| ||||||| |||| |||||||| ||||||||||| ||||||| |||||||||||| |
|
|
| T |
9825042 |
atgtaatgaactcaaaaatattagacatcgaaatttggttaagattttaacatgtttttctagtatcgattacaaagggcaagaattcaaagctctagtt |
9825141 |
T |
|
| Q |
118 |
tttgattacatgaaaaat-ggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaac |
216 |
Q |
| |
|
||||| |||||| ||||| |||||||||||||||||||| |||| ||| ||| ||||||||| | ||||||||| |||| ||| || || || |
|
|
| T |
9825142 |
tttgagtacatgcaaaatgggaagcttagaacaatggttgaatccaaggatagagaatgtagagcatcctagaacattggatcttgatcaaagattgaat |
9825241 |
T |
|
| Q |
217 |
atcattatcgatgttgcttc |
236 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
9825242 |
atcattattgatgttgcttc |
9825261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 10652469 - 10652176
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| || || || |||| || ||||||||||| || |||||||| ||||| |||||||||||| |||| ||||| ||| |||| |
|
|
| T |
10652469 |
atgtaatgcactaaaaaatatgaggcatagaaatttggttaaggttttgacatgttgttcgagtaccgattacaaaggtcaagagtttaaggctttagtg |
10652370 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||| || |||| | ||||||||||| ||||||| | || | ||| ||| | || || || |||||||||| ||| | | || | |
|
|
| T |
10652369 |
tttgaatacatgaacaacggaaacctagaacaatggctacatccaggtataatgaatgcagggattcaaagaatgttggaccttgatcaacgactgaata |
10652270 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||| | || ||||||||| ||||||||| || ||||| |||||||||||| | | |||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10652269 |
tcattgttgacattgcttctgtattacattaccttcatcatgaatgtgagcaagcggtcattcattgtgatctaaagccaagtaatgtccttct |
10652176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 10660352 - 10660209
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| || || || |||| || || |||||||| || |||||||| |||||||||||||||||| |||| ||||| ||| |||| |
|
|
| T |
10660352 |
atgtaatgcactaaaaaatatgaggcatagaaatttggtcaaggttttgacatgttgttcaagtacagattacaaaggtcaagagtttaaggctttagtg |
10660253 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcc |
161 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
10660252 |
tttgaatacatgaacaatggaagcctagaacaatggctacatcc |
10660209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 9850967 - 9850832
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaa-gctctagt |
116 |
Q |
| |
|
||||||||| ||||||| |||||||| |||| || |||||| ||||||| | ||||||||||| ||||||||||| | ||||| ||| |||||||| |
|
|
| T |
9850967 |
atgtaatgccctcaaaat-attagacatcgaaatttggttaagattttaacttcttgttctagtatcgattacaaagggcatgaattcaaaagctctagt |
9850869 |
T |
|
| Q |
117 |
ttttgattacatgaaaaatggaagcttagaacaatgg |
153 |
Q |
| |
|
|||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
9850868 |
tttttagtacatgataaatggaagcttagaacaatgg |
9850832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 10550726 - 10550869
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| ||||| ||| |||| ||||||| |||| || |||||||| || |||||||||||||| || ||||||||||| || |
|
|
| T |
10550726 |
atgtaatgcactaaaaaatattaggcacagaaatctagttaaaattttgacttgttgttccagcacagattacaaaggaagtgagtttaaagctcttgta |
10550825 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcc |
161 |
Q |
| |
|
||||| ||||||| |||||||| ||||||| | ||||| ||||| |
|
|
| T |
10550826 |
tttgagtacatgagaaatggaaacttagaaaattggttgcatcc |
10550869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 10660130 - 10660059
Alignment:
| Q |
240 |
attacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||||||| || ||||| |||||||||||| | | |||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10660130 |
attacattaccttcatcacgaatgtgagcaagcggtcattcattgtgatctaaagccaagtaatgtccttct |
10660059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 12899512 - 12899805
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| || |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
12899512 |
atgtaatgcactcaaaaacattcgacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtt |
12899611 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| |||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
12899612 |
tttgaatacatgaaaaatggaagcttagaacaatggttacatcccgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaaca |
12899711 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||||| ||||| |||| ||||| ||||| |
|
|
| T |
12899712 |
tcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattagtctttcattgtgatataaagccaagcaatgtccttct |
12899805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 12907132 - 12907425
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||| || |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
12907132 |
atgtaacgcactcaaaaatattagacacagaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtt |
12907231 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||| | ||| ||| || | | ||||| ||||||| ||||||||| ||| ||||||| |
|
|
| T |
12907232 |
tttgaatacatgaaaaatggaagcttagaacagtggttacatcctgaaactttgaatgcaaatcctccaacaacattgaaccttggtcttagattaaaca |
12907331 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||| |||||||||||| || || | |||||||||||||| |||| ||||| ||||| |
|
|
| T |
12907332 |
tcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagttaatcctccattgtgatctaaaaccaagcaatgtccttct |
12907425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 12932221 - 12932514
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||| || |||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
12932221 |
atgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagcactagtt |
12932320 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
12932321 |
tttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaaca |
12932420 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| || |||| |||||||||||| || || |||||||||||||||| |||| ||||| ||||| |
|
|
| T |
12932421 |
tcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagttaatccttcattgtgatctaaaaccaagcaatgtccttct |
12932514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 12948586 - 12948879
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||||||||| ||||| ||||||||| |||| || |||||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||| |
|
|
| T |
12948586 |
atgtaatgcactaaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaataacaaaggccaagaatttaaagctctagtt |
12948685 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| || | | ||||| ||||||| ||||| ||| ||| ||||||| |
|
|
| T |
12948686 |
tttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttcgtcgtagattaaaca |
12948785 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||| | |||||||||||||||| |||| ||||| ||||| |
|
|
| T |
12948786 |
tcattatcgatgttgcttctgcattacattatcttcatcgataatgtgagcaattagtccttcattgtgatctaaaaccaagcaatgtccttct |
12948879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 12958020 - 12958313
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||| || |||| ||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
12958020 |
atgtaacgcactcaaaaatattagacaccgaaatttggttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtt |
12958119 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagag-catccaaaaacattggaccttggtcataggttaaac |
216 |
Q |
| |
|
||||| |||||| ||||||||||||||||||| |||||||||||| | ||||| ||| | ||| | ||||| ||||||| ||||||||||||| |||||| |
|
|
| T |
12958120 |
tttgaatacatggaaaatggaagcttagaacagtggttacatcctcaaattttgaatgc-gagtcctccaacaacattgaaccttggtcatagattaaac |
12958218 |
T |
|
| Q |
217 |
atcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||| |||||||||||| || || |||| |||||||||||| |||| ||||| ||||| |
|
|
| T |
12958219 |
atcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagttaatccttcactgtgatctaaagccaagcaatgtccttct |
12958313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 18 - 311
Target Start/End: Complemental strand, 17923670 - 17923377
Alignment:
| Q |
18 |
atgtaatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtt |
117 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||| || |||||||||||||| ||||||||||| ||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
17923670 |
atgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtt |
17923571 |
T |
|
| Q |
118 |
tttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaaca |
217 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||| |
|
|
| T |
17923570 |
tttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaaca |
17923471 |
T |
|
| Q |
218 |
tcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
|||| |||||||||||||||||||| ||||| || |||| |||||||||||| || || |||||||||||||||| |||| ||||| ||||| |
|
|
| T |
17923470 |
tcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagttaatccttcattgtgatctaaaaccaagcaatgtccttct |
17923377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 46 - 311
Target Start/End: Original strand, 7263 - 7528
Alignment:
| Q |
46 |
tgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtttttgattacatgaaaaatggaagcttag |
145 |
Q |
| |
|
||||| || |||| ||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7263 |
tgaaatttggttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagcttag |
7362 |
T |
|
| Q |
146 |
aacaatggttacatcctgagattttaaattcagagcatccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttctgcattaca |
245 |
Q |
| |
|
|||| |||||||||||||||| ||| ||| || | | ||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7363 |
aacagtggttacatcctgagactttgaatgcaaatcctccaataacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattaca |
7462 |
T |
|
| Q |
246 |
ttatctgcatcaagaatgtgagcaattgattattcattgtgatctaaaggcaagtaatgttcttct |
311 |
Q |
| |
|
||| || |||| ||||||||||||||| || ||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
7463 |
ttaacttcatcgagaatgtgagcaattaatacttcattgtgatctaaagccaagcaatgtccttct |
7528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 31467425 - 31467300
Alignment:
| Q |
22 |
aatgcactcaaaaacattagacactgaaacttagttaaggttttaacctgttgttctagtacagattacaaaggtgaagaatttaaagctctagtttttg |
121 |
Q |
| |
|
|||||||||||||| ||||||||| |||| || |||||| ||||||| | ||||| |||||||||| ||||| | |||||||||||||||| ||||| | |
|
|
| T |
31467425 |
aatgcactcaaaaatattagacaccgaaatttggttaagattttaacaagctgttccagtacagatttcaaagatcaagaatttaaagctcttgttttcg |
31467326 |
T |
|
| Q |
122 |
attacatgaaaaatggaagcttagaa |
147 |
Q |
| |
|
| ||||||||||| |||||||||||| |
|
|
| T |
31467325 |
agtacatgaaaaacggaagcttagaa |
31467300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 39898877 - 39898820
Alignment:
| Q |
103 |
tttaaagctctagtttttgattacatgaaaaatggaagcttagaacaatggttacatc |
160 |
Q |
| |
|
|||||||| |||||||||| ||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
39898877 |
tttaaagcaatagtttttgaatacatgacaaatggaagcttagaggaatggttgcatc |
39898820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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