View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11494_low_19 (Length: 293)
Name: NF11494_low_19
Description: NF11494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11494_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 34761190 - 34761474
Alignment:
| Q |
1 |
ctctgaacctgctttataagtctggttagtcatcgaggggtggatagaatctgagacaatagagtgatgagacaatgctggagtagttgaagtaagaaga |
100 |
Q |
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| T |
34761190 |
ctctgaacctgctttataagtctggttagtcttcgaggggtggatagaatctgagacaatagagtgatgagacaatgctggagtagttgaagtaagaaga |
34761289 |
T |
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| Q |
101 |
agtaacaacaaagaaacaaaaacaggtagcatagatggagtgttttgagaagtggacaatatgagagaatggttgtgtgtacatgcttgttttgaggcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34761290 |
agtaacaacaaagaaacaaaaacaggtagcataggtggagtgttttgagaagtggacaatatgagagaatggttgtgtgtacatgcttgttttgaggcaa |
34761389 |
T |
|
| Q |
201 |
tatggtgttgtctttttgtgtggtgtgctacaaaatatggttctttcctatgtcttttcaaggaaactgagtattcctttgcttc |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34761390 |
tatggtgttgtctttttgtgtggtgtgctacaaaatatggttctttcctatgtcttttcaaggaaactgagtattcctttgcttc |
34761474 |
T |
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