View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11495_low_8 (Length: 274)

Name: NF11495_low_8
Description: NF11495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11495_low_8
NF11495_low_8
[»] chr6 (19 HSPs)
chr6 (41-270)||(1391623-1391854)
chr6 (41-270)||(6197453-6197684)
chr6 (41-270)||(2300714-2300944)
chr6 (41-270)||(28002664-28002895)
chr6 (58-270)||(29076597-29076811)
chr6 (58-270)||(29111570-29111785)
chr6 (48-267)||(7051847-7052067)
chr6 (59-199)||(31895767-31895907)
chr6 (59-199)||(14262427-14262567)
chr6 (75-194)||(34773485-34773604)
chr6 (75-199)||(34759060-34759184)
chr6 (75-240)||(7497105-7497270)
chr6 (59-194)||(31067569-31067694)
chr6 (59-199)||(30385063-30385191)
chr6 (42-105)||(2238676-2238741)
chr6 (41-240)||(656994-657165)
chr6 (59-179)||(4200431-4200541)
chr6 (150-194)||(3848286-3848330)
chr6 (65-105)||(11113733-11113773)
[»] scaffold0113 (1 HSPs)
scaffold0113 (41-270)||(38872-39102)
[»] chr2 (33 HSPs)
chr2 (41-270)||(24776356-24776586)
chr2 (41-270)||(16269692-16269923)
chr2 (41-270)||(20605237-20605468)
chr2 (41-270)||(31170602-31170833)
chr2 (41-270)||(12407381-12407612)
chr2 (41-270)||(14198555-14198786)
chr2 (41-270)||(43847647-43847878)
chr2 (42-270)||(5093025-5093256)
chr2 (41-270)||(305443-305674)
chr2 (41-270)||(35317063-35317294)
chr2 (41-270)||(22551741-22551972)
chr2 (41-270)||(44765776-44765998)
chr2 (41-240)||(9120157-9120358)
chr2 (41-195)||(32125330-32125486)
chr2 (84-270)||(1789443-1789630)
chr2 (59-270)||(28844556-28844768)
chr2 (59-270)||(33135624-33135835)
chr2 (59-199)||(10657479-10657619)
chr2 (59-194)||(18177345-18177480)
chr2 (59-194)||(25288237-25288372)
chr2 (89-199)||(26788859-26788969)
chr2 (41-240)||(26601191-26601379)
chr2 (59-182)||(43078653-43078776)
chr2 (128-270)||(28740349-28740492)
chr2 (41-190)||(10125280-10125418)
chr2 (130-199)||(7026677-7026746)
chr2 (75-193)||(13833445-13833553)
chr2 (130-193)||(379016-379079)
chr2 (59-199)||(3463745-3463875)
chr2 (141-240)||(3574878-3574978)
chr2 (141-199)||(6224626-6224684)
chr2 (150-199)||(21370638-21370687)
chr2 (75-128)||(6224580-6224633)
[»] chr3 (60 HSPs)
chr3 (41-270)||(40246843-40247073)
chr3 (41-270)||(20498208-20498439)
chr3 (41-270)||(25418365-25418595)
chr3 (41-240)||(10139122-10139323)
chr3 (41-270)||(996062-996293)
chr3 (41-270)||(19253826-19254057)
chr3 (41-240)||(3206181-3206382)
chr3 (44-270)||(3999624-3999852)
chr3 (41-270)||(37820453-37820684)
chr3 (41-240)||(6589593-6589795)
chr3 (62-270)||(33807796-33808006)
chr3 (41-270)||(29448833-29449065)
chr3 (41-270)||(35337734-35337963)
chr3 (45-239)||(54625622-54625818)
chr3 (41-270)||(53929104-53929335)
chr3 (41-270)||(44762011-44762244)
chr3 (70-270)||(33996547-33996748)
chr3 (41-270)||(52114527-52114759)
chr3 (41-152)||(6131210-6131321)
chr3 (41-199)||(6035031-6035188)
chr3 (79-270)||(51699495-51699686)
chr3 (56-193)||(5825139-5825276)
chr3 (41-175)||(1439869-1440005)
chr3 (59-199)||(18749683-18749823)
chr3 (59-199)||(36674125-36674265)
chr3 (59-270)||(17946287-17946499)
chr3 (53-240)||(29030035-29030222)
chr3 (59-199)||(32580247-32580387)
chr3 (42-199)||(27899415-27899560)
chr3 (59-194)||(34484025-34484160)
chr3 (75-193)||(40897221-40897339)
chr3 (59-270)||(44906508-44906720)
chr3 (59-273)||(26107257-26107472)
chr3 (59-199)||(11431597-11431737)
chr3 (118-237)||(1440006-1440126)
chr3 (99-198)||(22057834-22057933)
chr3 (59-194)||(54628920-54629055)
chr3 (59-199)||(50903235-50903375)
chr3 (59-270)||(48379156-48379368)
chr3 (41-198)||(52079999-52080142)
chr3 (84-240)||(51737746-51737903)
chr3 (59-199)||(52810449-52810589)
chr3 (59-270)||(52617966-52618172)
chr3 (84-194)||(31646304-31646414)
chr3 (75-199)||(20833063-20833187)
chr3 (59-270)||(10728646-10728848)
chr3 (96-190)||(55235264-55235359)
chr3 (130-194)||(10660611-10660675)
chr3 (59-199)||(37454932-37455062)
chr3 (59-199)||(39842489-39842619)
chr3 (41-193)||(44276466-44276603)
chr3 (62-117)||(33807678-33807733)
chr3 (130-270)||(39038039-39038180)
chr3 (59-199)||(50762055-50762185)
chr3 (141-270)||(23753463-23753593)
chr3 (136-199)||(539476-539539)
chr3 (82-199)||(6975817-6975924)
chr3 (143-237)||(23535890-23535984)
chr3 (59-128)||(45862983-45863052)
chr3 (59-139)||(15492862-15492942)
[»] chr8 (37 HSPs)
chr8 (48-270)||(23115152-23115374)
chr8 (41-270)||(24501788-24502019)
chr8 (41-270)||(26374405-26374636)
chr8 (44-270)||(42938095-42938323)
chr8 (41-270)||(2704794-2705025)
chr8 (41-240)||(7506874-7507075)
chr8 (41-270)||(42937353-42937582)
chr8 (41-270)||(5576595-5576827)
chr8 (41-238)||(42735252-42735451)
chr8 (45-270)||(10392217-10392443)
chr8 (41-270)||(41479097-41479318)
chr8 (41-270)||(43959658-43959878)
chr8 (59-199)||(14782129-14782269)
chr8 (59-199)||(44725804-44725944)
chr8 (59-194)||(4403184-4403319)
chr8 (51-240)||(10295366-10295557)
chr8 (59-199)||(9288451-9288591)
chr8 (44-192)||(4949995-4950143)
chr8 (75-240)||(43166700-43166866)
chr8 (75-199)||(18958737-18958861)
chr8 (59-199)||(19717875-19718015)
chr8 (59-199)||(26856139-26856279)
chr8 (75-199)||(39467478-39467602)
chr8 (141-270)||(32711358-32711488)
chr8 (41-191)||(39189793-39189940)
chr8 (85-193)||(8410416-8410526)
chr8 (41-191)||(13478226-13478376)
chr8 (59-199)||(7466407-7466537)
chr8 (62-199)||(18305968-18306095)
chr8 (59-240)||(32497555-32497727)
chr8 (130-199)||(16362268-16362337)
chr8 (130-199)||(37857191-37857260)
chr8 (141-270)||(31623695-31623825)
chr8 (141-199)||(4031334-4031392)
chr8 (130-194)||(42305850-42305914)
chr8 (59-128)||(9770434-9770503)
chr8 (76-117)||(32711305-32711346)
[»] chr5 (25 HSPs)
chr5 (44-270)||(21147067-21147294)
chr5 (41-240)||(33656017-33656217)
chr5 (41-240)||(7016714-7016915)
chr5 (41-270)||(5272894-5273125)
chr5 (41-270)||(27458925-27459155)
chr5 (84-240)||(849177-849334)
chr5 (42-270)||(139273-139504)
chr5 (41-270)||(32157869-32158104)
chr5 (59-199)||(14000099-14000239)
chr5 (59-270)||(1152097-1152309)
chr5 (98-270)||(6460792-6460965)
chr5 (44-235)||(9689693-9689884)
chr5 (59-199)||(13926003-13926143)
chr5 (59-199)||(39852417-39852557)
chr5 (53-199)||(4550245-4550391)
chr5 (75-190)||(7947583-7947698)
chr5 (104-199)||(14465266-14465361)
chr5 (44-240)||(9220696-9220883)
chr5 (59-194)||(5949185-5949310)
chr5 (130-270)||(4240517-4240658)
chr5 (130-190)||(1461203-1461263)
chr5 (59-199)||(22746369-22746501)
chr5 (59-190)||(40013706-40013827)
chr5 (45-139)||(1511330-1511426)
chr5 (141-270)||(37013914-37014044)
[»] scaffold0400 (1 HSPs)
scaffold0400 (41-270)||(15009-15240)
[»] scaffold0365 (1 HSPs)
scaffold0365 (41-270)||(15652-15883)
[»] chr7 (60 HSPs)
chr7 (41-270)||(40996624-40996855)
chr7 (41-270)||(43581065-43581296)
chr7 (48-240)||(7718345-7718538)
chr7 (41-270)||(973185-973416)
chr7 (41-270)||(30440797-30441028)
chr7 (41-240)||(18914710-18914911)
chr7 (44-240)||(7719238-7719436)
chr7 (41-237)||(34695307-34695505)
chr7 (41-270)||(47914267-47914498)
chr7 (44-270)||(44343374-44343602)
chr7 (41-270)||(47879169-47879400)
chr7 (44-270)||(12893409-12893639)
chr7 (41-240)||(39219352-39219552)
chr7 (41-270)||(20275238-20275469)
chr7 (41-270)||(34009013-34009245)
chr7 (44-194)||(32142895-32143046)
chr7 (42-199)||(10068533-10068689)
chr7 (41-195)||(7113529-7113684)
chr7 (94-195)||(43679491-43679592)
chr7 (59-199)||(23101364-23101504)
chr7 (59-199)||(28342413-28342553)
chr7 (59-199)||(3022992-3023132)
chr7 (59-199)||(39784165-39784305)
chr7 (41-193)||(43187334-43187485)
chr7 (59-199)||(18838455-18838595)
chr7 (75-199)||(29614774-29614898)
chr7 (92-199)||(12963767-12963874)
chr7 (59-199)||(28034799-28034939)
chr7 (46-193)||(33382709-33382855)
chr7 (59-193)||(7993214-7993348)
chr7 (59-270)||(9882231-9882442)
chr7 (59-240)||(8675357-8675539)
chr7 (59-270)||(9179874-9180076)
chr7 (60-199)||(12740439-12740577)
chr7 (132-236)||(31638910-31639015)
chr7 (46-270)||(3797049-3797263)
chr7 (83-198)||(727587-727692)
chr7 (95-194)||(25805763-25805862)
chr7 (59-179)||(37972861-37972981)
chr7 (59-179)||(41827390-41827510)
chr7 (43-194)||(1470213-1470362)
chr7 (59-190)||(19810874-19810995)
chr7 (109-240)||(10676464-10676596)
chr7 (75-194)||(44256776-44256895)
chr7 (109-199)||(32883848-32883938)
chr7 (60-199)||(19251605-19251734)
chr7 (130-194)||(44121965-44122029)
chr7 (59-199)||(509722-509852)
chr7 (130-199)||(40460772-40460841)
chr7 (128-240)||(46405494-46405607)
chr7 (130-193)||(29585586-29585649)
chr7 (130-199)||(37327993-37328062)
chr7 (81-159)||(10617024-10617102)
chr7 (141-199)||(47066770-47066828)
chr7 (141-194)||(17001099-17001152)
chr7 (130-240)||(33892315-33892426)
chr7 (130-199)||(39028163-39028232)
chr7 (135-194)||(447854-447913)
chr7 (41-91)||(31639031-31639082)
chr7 (79-270)||(44623300-44623482)
[»] chr4 (63 HSPs)
chr4 (41-270)||(25331130-25331361)
chr4 (41-270)||(41881056-41881290)
chr4 (41-270)||(55302842-55303077)
chr4 (41-240)||(42786713-42786913)
chr4 (43-240)||(1044836-1045035)
chr4 (41-270)||(32950811-32951043)
chr4 (41-270)||(12112944-12113176)
chr4 (41-270)||(34228559-34228790)
chr4 (41-270)||(1112892-1113121)
chr4 (41-236)||(30009653-30009850)
chr4 (41-270)||(7007373-7007605)
chr4 (41-270)||(22202014-22202245)
chr4 (42-270)||(39479332-39479564)
chr4 (41-270)||(37046425-37046659)
chr4 (43-199)||(41320881-41321038)
chr4 (42-268)||(31314719-31314933)
chr4 (41-239)||(3436623-3436823)
chr4 (41-270)||(46635624-46635849)
chr4 (41-270)||(24130957-24131179)
chr4 (94-270)||(28541697-28541874)
chr4 (93-239)||(25446080-25446227)
chr4 (48-196)||(27454061-27454210)
chr4 (41-240)||(53275868-53276069)
chr4 (94-199)||(7249795-7249900)
chr4 (85-270)||(19740929-19741115)
chr4 (59-199)||(5441475-5441615)
chr4 (59-199)||(27768127-27768267)
chr4 (59-199)||(54341215-54341355)
chr4 (59-199)||(37828397-37828537)
chr4 (59-199)||(48261198-48261338)
chr4 (45-199)||(9163147-9163292)
chr4 (41-194)||(40537136-40537280)
chr4 (109-231)||(23464993-23465116)
chr4 (75-193)||(44770864-44770982)
chr4 (59-270)||(51320920-51321132)
chr4 (59-199)||(54853463-54853603)
chr4 (45-240)||(39307234-39307430)
chr4 (121-239)||(25504696-25504815)
chr4 (75-240)||(37915856-37916022)
chr4 (59-199)||(32322162-32322302)
chr4 (41-158)||(8711978-8712094)
chr4 (41-193)||(12913301-12913442)
chr4 (59-199)||(23987285-23987415)
chr4 (59-158)||(24736447-24736546)
chr4 (59-193)||(56445350-56445474)
chr4 (41-139)||(11090435-11090532)
chr4 (75-199)||(41725196-41725317)
chr4 (109-193)||(28371001-28371085)
chr4 (128-240)||(29649731-29649844)
chr4 (42-199)||(36479221-36479366)
chr4 (58-199)||(30967303-30967434)
chr4 (70-199)||(41581795-41581923)
chr4 (109-179)||(20021424-20021494)
chr4 (59-240)||(28483928-28484099)
chr4 (141-199)||(32684065-32684123)
chr4 (141-199)||(49834890-49834948)
chr4 (130-199)||(50018322-50018391)
chr4 (141-199)||(5800049-5800107)
chr4 (59-199)||(49501514-49501646)
chr4 (59-199)||(49507579-49507711)
chr4 (43-191)||(13400785-13400935)
chr4 (75-128)||(32684019-32684072)
chr4 (58-138)||(36727944-36728023)
[»] chr1 (46 HSPs)
chr1 (41-270)||(19451784-19452015)
chr1 (41-270)||(21222140-21222371)
chr1 (41-270)||(49198245-49198475)
chr1 (41-270)||(50192526-50192758)
chr1 (41-236)||(45759985-45760182)
chr1 (42-270)||(6304227-6304460)
chr1 (41-270)||(47654327-47654559)
chr1 (41-270)||(28824349-28824579)
chr1 (61-270)||(35279665-35279875)
chr1 (41-236)||(47780738-47780935)
chr1 (41-270)||(35679102-35679335)
chr1 (58-237)||(45535970-45536156)
chr1 (41-270)||(29556097-29556328)
chr1 (42-194)||(31572174-31572327)
chr1 (42-239)||(32588936-32589129)
chr1 (53-236)||(49418111-49418295)
chr1 (42-199)||(9577411-9577567)
chr1 (41-239)||(33025536-33025726)
chr1 (99-270)||(730141-730314)
chr1 (59-199)||(6312639-6312779)
chr1 (59-199)||(29396383-29396523)
chr1 (59-199)||(48177457-48177597)
chr1 (75-199)||(51701645-51701769)
chr1 (45-240)||(37014622-37014817)
chr1 (59-199)||(25612222-25612362)
chr1 (59-194)||(9322495-9322630)
chr1 (93-236)||(48524346-48524490)
chr1 (59-194)||(15835048-15835183)
chr1 (75-270)||(46328035-46328231)
chr1 (59-194)||(28387388-28387523)
chr1 (44-199)||(51085860-51086014)
chr1 (132-191)||(955823-955882)
chr1 (59-199)||(29219351-29219481)
chr1 (59-199)||(38536094-38536224)
chr1 (59-199)||(38558312-38558442)
chr1 (59-194)||(48668780-48668905)
chr1 (42-101)||(48524805-48524865)
chr1 (141-199)||(18798556-18798614)
chr1 (150-270)||(49230879-49231000)
chr1 (75-240)||(5495117-5495273)
chr1 (177-270)||(22183363-22183457)
chr1 (41-91)||(730307-730357)
chr1 (141-191)||(31622536-31622586)
chr1 (79-174)||(38319996-38320091)
chr1 (98-199)||(47784451-47784542)
chr1 (75-128)||(18798607-18798660)
[»] scaffold0151 (1 HSPs)
scaffold0151 (41-240)||(38581-38781)
[»] scaffold0004 (1 HSPs)
scaffold0004 (43-240)||(102125-102324)
[»] scaffold0037 (1 HSPs)
scaffold0037 (41-270)||(100211-100444)
[»] scaffold0276 (1 HSPs)
scaffold0276 (53-270)||(528-746)
[»] scaffold0543 (1 HSPs)
scaffold0543 (59-194)||(10637-10772)
[»] scaffold0110 (1 HSPs)
scaffold0110 (59-194)||(39612-39747)
[»] scaffold1504 (1 HSPs)
scaffold1504 (58-199)||(936-1076)
[»] scaffold0042 (1 HSPs)
scaffold0042 (59-194)||(58071-58206)
[»] scaffold0054 (1 HSPs)
scaffold0054 (62-192)||(36905-37035)
[»] scaffold0922 (1 HSPs)
scaffold0922 (134-199)||(4272-4337)
[»] scaffold0347 (1 HSPs)
scaffold0347 (59-139)||(14892-14972)
[»] scaffold0306 (2 HSPs)
scaffold0306 (130-199)||(13954-14023)
scaffold0306 (59-103)||(14040-14084)
[»] scaffold0152 (3 HSPs)
scaffold0152 (130-199)||(21304-21373)
scaffold0152 (59-103)||(21243-21287)
scaffold0152 (59-103)||(28510-28554)
[»] scaffold0839 (1 HSPs)
scaffold0839 (84-164)||(3712-3792)
[»] scaffold0007 (1 HSPs)
scaffold0007 (113-191)||(199905-199983)


Alignment Details
Target: chr6 (Bit Score: 166; Significance: 6e-89; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 1391854 - 1391623
Alignment:
Q  41 tagtaaaatcttaaaa-gaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1391854 tagtaaaatcttaaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 1391755  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  1391754 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 1391655  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| |||| |||||||||||||    
T  1391654 actttatttaaatgacaatgaatcttgattga 1391623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 6197453 - 6197684
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6197453 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6197552  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  6197553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 6197652  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  6197653 actttttttaaatgacaaagaatcttgattga 6197684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 2300714 - 2300944
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2300714 tagtaaaattttaaaagaaaaaaaaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 2300813  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||       ||||||| ||||||| ||||||||||||||||||    
T  2300814 caaaatcttatttattaaacaatccttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaaga 2300913  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  2300914 ctttttttaaatgacaaagaatcttgattga 2300944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 28002895 - 28002664
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  28002895 tagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcca 28002796  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||| ||||||||||||| |||    
T  28002795 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccagaag 28002696  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||| ||||||||||||    
T  28002695 actttttttaaatgacaaaaaatcttgattga 28002664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 58 - 270
Target Start/End: Complemental strand, 29076811 - 29076597
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 157  Q
    |||||||||||||||  ||||||||||||| |||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  29076811 aaaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttatta 29076712  T
Q  158 aacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtct-gattgaataccacaagacnnnnnnnaaataaca 255  Q
    ||||||||||| |||||||||||||||||||||| |||||||        |||||||||||| ||| ||||||||||||||||||       |||| |||    
T  29076711 aacaatccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgaca 29076612  T
Q  256 aagaatcttgattga 270  Q
    |||||||||||||||    
T  29076611 aagaatcttgattga 29076597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 58 - 270
Target Start/End: Complemental strand, 29111785 - 29111570
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 157  Q
    |||||||||||||||  ||||||||||||| |||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  29111785 aaaaaacaatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttatta 29111686  T
Q  158 aacaatccttccaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtct-gattgaataccacaagacnnnnnnnaaataac 254  Q
    ||||||||||| |||||||||||||||||||||| |||||||         |||||||||||| ||| ||||||||||||||||||       |||| ||    
T  29111685 aacaatccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgac 29111586  T
Q  255 aaagaatcttgattga 270  Q
    ||||||||||||||||    
T  29111585 aaagaatcttgattga 29111570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 267
Target Start/End: Complemental strand, 7052067 - 7051847
Alignment:
Q  48 atcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatc 147  Q
    ||||||| || ||||||||| ||||| ||||||||| ||| |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  7052067 atcttaacaggaaaaacaattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatc 7051968  T
Q  148 tgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnn 246  Q
      ||||||||||||||||||| ||||||||||||||||||||| |||  |||       ||||||| ||||||| |||||| ||||||||||||          
T  7051967 caatttattaaacaatccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttt 7051868  T
Q  247 naaataacaaagaatcttgat 267  Q
     |||| |||||||||||||||    
T  7051867 taaatgacaaagaatcttgat 7051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 31895907 - 31895767
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  31895907 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaa 31895808  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  31895807 acaatccttcgaaatttgaatgattttgaataccacaagac 31895767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 14262427 - 14262567
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||| ||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  14262427 aaaaacaatctcaagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 14262526  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  14262527 acaatccttcgaaatttaaatgattttgaataccacaagac 14262567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 34773604 - 34773485
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||  ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  34773604 aatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 34773505  T
Q  175 tgaatgattttgaataccac 194  Q
    ||||||||||||||||||||    
T  34773504 tgaatgattttgaataccac 34773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 34759060 - 34759184
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||    
T  34759060 aatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttggaaatt 34759159  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||||||| ||||    
T  34759160 tgaatgattttgaataccacaagac 34759184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 75 - 240
Target Start/End: Complemental strand, 7497270 - 7497105
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||| ||||||||||||||||||  |||||||||||| |||||| |||||    
T  7497270 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcgaaatt 7497172  T
Q  175 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||||||||||||| ||||       ||||||| || | || |||||||||||||||||||    
T  7497171 tgaatgattttgaataccacaagactttttttaagtgatgaaaaatcttgattgaataccacaagac 7497105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 31067694 - 31067569
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||          |||||||||    
T  31067694 aaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 31067605  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  31067604 acaatccttcgaaatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 30385063 - 30385191
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||||||| |  ||  |||||| ||||| ||||||||||||||||||          |||||||||    
T  30385063 aaaaacaatctcaagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 30385150  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  30385151 acaatccttcgaaatttgaatgattttgaataccacaagac 30385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 2238741 - 2238676
Alignment:
Q  42 agtaaaatcttaaaagaaaaaa--caatcctaaggaatctcatgttttcatgaaagactttttcat 105  Q
    ||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||| ||||||||    
T  2238741 agtaaaatcttaaaagaaaaaaaacaatcttaagaaatctcatgttttcatgaaagattttttcat 2238676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 657165 - 656994
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||                |||||||||||   ||||||||||||||||||    
T  657165 tagtaaaattttaaaagaaaaaacaatcctaagaaatttcatgttttcatga---------------taaaatttcact---aaatcccacaaaatccat 657084  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    || |||| ||||||||||           ||||||||||||||| ||||||||||||||       ||||||||||||||| ||||||||||||||||||    
T  657083 cagaatcagatttattaa-----------aaatttgaatgatttagaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 656995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 4200431 - 4200541
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  4200431 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 4200520  T
Q  159 acaatccttccaaatttgaat 179  Q
    |||||||||| ||||||||||    
T  4200521 acaatccttcgaaatttgaat 4200541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  150 atttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  65 aatcctaaggaatctcatgttttcatgaaagactttttcat 105  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 38872 - 39102
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38872 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 38971  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||| | ||||||||||||||||    
T  38972 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaaga 39071  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| | ||||||||||||||||    
T  39072 ctttttttaaatgataaagaatcttgattga 39102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 3e-88; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 24776586 - 24776356
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24776586 tagtaaaatcttaaaagaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 24776487  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||    
T  24776486 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 24776387  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  24776386 ctttttttaaatgacaaagaatcttgattga 24776356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 16269923 - 16269692
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  16269923 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcca 16269824  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  16269823 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 16269724  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  16269723 actttttttaaatgacaaagaatcttgattga 16269692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 20605468 - 20605237
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20605468 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20605369  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  20605368 tcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20605269  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  20605268 actttttttaaatgacaaagaatcttgattga 20605237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 31170602 - 31170833
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31170602 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 31170701  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  31170702 tcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 31170801  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  31170802 actttttttaaatgacaaagaatcttgattga 31170833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 12407612 - 12407381
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  12407612 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcca 12407513  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtct-gattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  12407512 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 12407413  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  12407412 actttttttaaatgacaaagaatcttgattga 12407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 14198555 - 14198786
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14198555 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcca 14198654  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||       ||||||||||||||| |||||||||||||||||    
T  14198655 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaag 14198754  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||| ||||||||    
T  14198755 actttttttaaatgacaaagaattttgattga 14198786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 43847878 - 43847647
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  43847878 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcca 43847779  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||       ||||||||||||||| |||||||||||||||||    
T  43847778 tcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaag 43847679  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  43847678 actttttttaaatgacaaagaatcttgattga 43847647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 5093025 - 5093256
Alignment:
Q  42 agtaaaatcttaaaagaaaa--aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  5093025 agtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatcca 5093124  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||       ||||||||||| ||| |||||||||||||||||    
T  5093125 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaag 5093224  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  5093225 actttttttaaatgacaaagaatcttgattga 5093256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 305443 - 305674
Alignment:
Q  41 tagtaaaatcttaaaagaaa-aaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  305443 tagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcca 305542  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  305543 tcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 305642  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||| ||||||||||||    
T  305643 acttttttcaaatgacaaataatcttgattga 305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 35317294 - 35317063
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||  |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  35317294 tagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 35317195  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||  |||||    
T  35317194 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaag 35317095  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  35317094 actttttttaaatgacaaagaatcttgattga 35317063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 22551741 - 22551972
Alignment:
Q  41 tagtaaaatcttaaaag-aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22551741 tagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22551840  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||| | ||||| ||||||||| ||| |||||||||| |||||||||||||||||||       |||||||||| |||| |||||||||||||||||    
T  22551841 tcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaag 22551940  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  22551941 actttttttaaatgacaaagaatcttgattga 22551972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 44765998 - 44765776
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||         |||| |||||||||||||||||||||||||||||||    
T  44765998 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatcca 44765908  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtct-gattgaataccacaag 238  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||    
T  44765907 tcaaaatcttatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 44765808  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  44765807 actttttttaaatgacaaagaatcttgattga 44765776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 9120358 - 9120157
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||    
T  9120358 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatcca 9120259  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||  |||| |||||||||||||||| |||||||        |||||||||||| || |||||||||| ||||||    
T  9120258 tcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcactagattttttttaagtgattaagaatcttgattgaataacacaag 9120159  T
Q  239 ac 240  Q
    ||    
T  9120158 ac 9120157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 32125486 - 32125330
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcct-aaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||||||||| ||||  | ||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  32125486 tagtaaaatcttaaaagaaaaaaacaatttttaagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcc 32125387  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccact 195  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32125386 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccact 32125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 84 - 270
Target Start/End: Complemental strand, 1789630 - 1789443
Alignment:
Q  84 ttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgatt 183  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  184 ttgaataccactagacnnnnnnnaagtgattaagag-tctgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||||||||||||||       ||||||||||||| | |||||||||| || |||||       |||| ||||||||||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaatatcataagactttttttaaatgacaaagaatcttgattga 1789443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 28844768 - 28844556
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||| |   |||||| ||||| ||||| ||||||||||||||||||||| |||||||||    
T  28844768 aaaaacaatctcaagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaa 28844669  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  28844668 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 28844569  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  28844568 gagtcttgattga 28844556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 33135835 - 33135624
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  33135835 aaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 33135737  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  33135736 acaatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 33135637  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  33135636 gagtcttgattga 33135624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 10657619 - 10657479
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||| |||| ||||||||||| |||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  10657619 aaaaacaatctcaagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 10657520  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  10657519 acaatcattcgaaatttgaatgattttgaataccacaagac 10657479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 18177480 - 18177345
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| || |||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||| |||||    
T  18177480 aaaaacaatctcaagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaa 18177381  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  18177380 acaatccttcgaaatttgaatgattttgaataccac 18177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 25288372 - 25288237
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||| || || ||  |||||| ||||| ||||||||||||||| ||||||||||  |||||||||    
T  25288372 aaaaacaatctcaagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaa 25288273  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  25288272 acaatccttcgaaatttgaatgattttgaataccac 25288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 26788969 - 26788859
Alignment:
Q  89 atgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaa 188  Q
    ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  26788969 atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaa 26788870  T
Q  189 taccactagac 199  Q
    |||||| ||||    
T  26788869 taccacaagac 26788859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 26601191 - 26601379
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||| ||| || |||| |||  ||| ||||||||||||||||||              
T  26601191 tagtaaaatcttaaaagaaaaaacaatcctaaaaaatct-atgttttcatcaaaaac-ttttaatgttaaagtttcactagaaaatccca---------- 26601278  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||||||||  |||       ||||||||||||||| ||||||||||| ||||||    
T  26601279 caaaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaatactacaaga 26601378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 43078776 - 43078653
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||| || |||| ||||||||||||||||||  |||||| ||||| ||||||||||||||||||| ||||||  |||||||||    
T  43078776 aaaaacaatctcaagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaa 43078677  T
Q  159 acaatccttccaaatttgaatgat 182  Q
    |||||| ||| |||||||||||||    
T  43078676 acaatcattcgaaatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 270
Target Start/End: Original strand, 28740349 - 28740492
Alignment:
Q  128 ccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgatt 226  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||    
T  28740349 ccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 28740448  T
Q  227 gaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||||| ||||||       |||| ||||||| ||||||||||    
T  28740449 gaatacctcaagacttttttaaaatgacaaagagtcttgattga 28740492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 10125280 - 10125418
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||| | |||||||||||| ||||| |||| |||||| |||||| ||||||||||||||| ||  |||||||||||| ||||||||||||||| ||     
T  10125280 tagtaaacttttaaaagaaaaa-caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca- 10125377  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaata 190  Q
             ||||||||||||||||||  |||||||||||||||||||||    
T  10125378 ---------atttattaaacaatcctttgaaatttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 7026746 - 7026677
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 7026677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 13833445 - 13833553
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| || ||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||          ||||||||||||||||||| |||||    
T  13833445 aatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaaaatt 13833534  T
Q  175 tgaatgattttgaatacca 193  Q
    |||||||||||||||||||    
T  13833535 tgaatgattttgaatacca 13833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 3463875 - 3463745
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  3463875 aaaaacaatctcaagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 3463786  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  ||| |||||||||||| |||||||| ||||    
T  3463785 acaatcctttgaaaattgaatgattttaaataccacaagac 3463745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 3574978 - 3574878
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||| ||| ||||       ||||||| || |||| |||||||||||| |||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 3574879  T
Q  240 c 240  Q
    |    
T  3574878 c 3574878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 6224626 - 6224684
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  |||||||||| |||||||| |||||||||| |||||||||||||| ||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacaagac 6224684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 21370638 - 21370687
Alignment:
Q  150 atttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||| ||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccacaagac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 6224580 - 6224633
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcc 128  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||    
T  6224580 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 6e-86; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 40247073 - 40246843
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40247073 tagtaaaatcttaaaagaaaaaacaatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 40246974  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||||| |||| |||||||||||||||| |    
T  40246973 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaa 40246874  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  40246873 ctttttttaaatgacaaagaatcttgattga 40246843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 20498439 - 20498208
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20498439 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20498340  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  20498339 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20498240  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  20498239 actttttttaaatgacaaagaatcttgattga 20498208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 25418595 - 25418365
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25418595 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccat 25418496  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||        |||||||||| |||| ||||||||||||||||||    
T  25418495 caaaatctgatttattaaacaatcctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaaga 25418396  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  25418395 ctttttttaaatgacaaagaatcttgattga 25418365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 10139122 - 10139323
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10139122 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 10139221  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  10139222 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 10139321  T
Q  239 ac 240  Q
    ||    
T  10139322 ac 10139323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 996062 - 996293
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  996062 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 996161  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||| || |||||||||||||||||    
T  996162 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 996261  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| | ||||||||||||||||    
T  996262 acttttttgaaatgataaagaatcttgattga 996293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 19254057 - 19253826
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19254057 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19253958  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  19253957 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 19253858  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  19253857 actttttttaaatgacaaagaatcttgattga 19253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 3206181 - 3206382
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  3206181 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 3206280  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  3206281 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 3206380  T
Q  239 ac 240  Q
    ||    
T  3206381 ac 3206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 3999624 - 3999852
Alignment:
Q  44 taaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3999624 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatca 3999723  T
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacn 241  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||     
T  3999724 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagact 3999823  T
Q  242 nnnnnnaaataacaaagaatcttgattga 270  Q
          |||| ||||||||||||||||||    
T  3999824 ttttttaaatgacaaagaatcttgattga 3999852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 37820453 - 37820684
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  37820453 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcca 37820552  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||| || |||||||||||||||||    
T  37820553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 37820652  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    |        |||| ||||||||||||||||||    
T  37820653 aatttttttaaatgacaaagaatcttgattga 37820684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 6589795 - 6589593
Alignment:
Q  41 tagtaaaatcttaaaag--aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6589795 tagtaaaatcttaaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 6589696  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||       || |||||||||||| ||||||||||||||||    
T  6589695 atcaaaatctgatttattaaataattcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaa 6589596  T
Q  238 gac 240  Q
    |||    
T  6589595 gac 6589593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 33807796 - 33808006
Alignment:
Q  62 aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807796 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 33807895  T
Q  162 atccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaaga 259  Q
    ||||||| ||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||       |||| |||||||    
T  33807896 atccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaaga 33807995  T
Q  260 atcttgattga 270  Q
    ||||| |||||    
T  33807996 atcttaattga 33808006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 29448833 - 29449065
Alignment:
Q  41 tagtaaaatcttaaaag--aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  29448833 tagtaaaatcttaaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatcc 29448932  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||| |||||| |||||||||| |||||    
T  29448933 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaa 29449032  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| |||| |||||||||||||    
T  29449033 gactttttgtaaatgacaaggaatcttgattga 29449065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 35337963 - 35337734
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  35337963 tagtaaaatcttaaaagaaaaaaacaatcctaaa-aatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcca 35337866  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  35337865 tcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 35337766  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| |||| |||||||||||||    
T  35337765 acttttttaaaatgacaaggaatcttgattga 35337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 45 - 239
Target Start/End: Complemental strand, 54625818 - 54625622
Alignment:
Q  45 aaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    ||||||||||||| ||||| ||||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  54625818 aaaatcttaaaagcaaaaatcaatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaa 54625719  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||| ||||||    
T  54625718 aatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaaga 54625622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 53929104 - 53929335
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||| |||||||||||  |||||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  53929104 tagtaaaattttaaaagaaaaaaacaatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatcca 53929203  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||| ||| | |||| |||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  53929204 tcaaaatcttatttattaaacaatcgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 53929303  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  53929304 actttttttaaatgacaaagaatcttgattga 53929335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 44762011 - 44762244
Alignment:
Q  41 tagtaaaatcttaaaag---aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatc 137  Q
    ||||||||||||||||    ||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  44762011 tagtaaaatcttaaaaagaaaaaaaacaatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc 44762110  T
Q  138 catcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||       ||||||||||||||| ||||||||||| |||    
T  44762111 catcaaaatctgatttattaaacaatccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactaca 44762210  T
Q  237 agacnnnnnnnaaataacaaagaatcttgattga 270  Q
     |||       |||| ||||||||||||||||||    
T  44762211 tgactttttttaaatgacaaagaatcttgattga 44762244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 270
Target Start/End: Original strand, 33996547 - 33996748
Alignment:
Q  70 taaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcc 169  Q
    |||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  170 aaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgatt 268  Q
    |||||||||||||||||||||||||| ||        ||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  269 ga 270  Q
    ||    
T  33996747 ga 33996748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 52114759 - 52114527
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaac-aatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||  ||||| |||||||||| ||||||| |||||||||| |||||||||| |    
T  52114759 tagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatcta 52114660  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||        |||||||||| |||| ||||||||||||||||    
T  52114659 tcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaa 52114560  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||||||||||| ||||    
T  52114559 gactttttttaaatgacaaagaatcttggttga 52114527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 6131210 - 6131321
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6131210 tagtaaaatcttaaaagaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 6131309  T
Q  141 caaaatctgatt 152  Q
    ||||||||||||    
T  6131310 caaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 6035031 - 6035188
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||| |||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6035031 tagtaaaattttaaaagaaaaa-caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccat 6035129  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||| |||||||||||| | |||| ||||||||||||||||||||| ||| ||||    
T  6035130 caaaatctaatttattaaacattgcttcgaaatttgaatgattttgaatatcacgagac 6035188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 79 - 270
Target Start/End: Original strand, 51699495 - 51699686
Alignment:
Q  79 tcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaa 178  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  179 tgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||        |||| ||||||||||||||||||    
T  51699595 tgattttgaataccactaga-tttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattga 51699686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 193
Target Start/End: Complemental strand, 5825276 - 5825139
Alignment:
Q  56 agaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttat 155  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||||| |||||||||  ||||||    
T  5825276 agaaaaaacaatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttat 5825177  T
Q  156 taaacaatccttccaaatttgaatgattttgaatacca 193  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5825176 taaacaatccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 1439869 - 1440005
Alignment:
Q  41 tagtaaaatcttaaaag--aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||   |||||||||||||||  |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||     
T  1439869 tagtaaaatcttaaaaagaaaaaaacaatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatct 1439968  T
Q  139 atcaaaatctgatttattaaacaatccttccaaattt 175  Q
    |||||||||| ||||||||||||||||||||||||||    
T  1439969 atcaaaatctaatttattaaacaatccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 18749823 - 18749683
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  18749823 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 18749724  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  18749723 acaatccttcgaaatttgaatgattttgaataccacaagac 18749683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 36674125 - 36674265
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  36674125 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 36674224  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  36674225 acaatccttcaaaatttgaatgattttgaataccacaagac 36674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 17946499 - 17946287
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  17946499 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 17946400  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||  ||||||||||||||||||||| ||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  17946399 acaatcctttgaaatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 17946300  T
Q  258 gaatcttgattga 270  Q
    |||||||||||||    
T  17946299 gaatcttgattga 17946287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 29030222 - 29030035
Alignment:
Q  53 aaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 152  Q
    ||||||||||| |||  | || |||||||||||||||| ||| |    ||||||  ||||||||| |||||||| |||||||||||||||||||||||||    
T  29030222 aaaagaaaaaataatttttagaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatt 29030123  T
Q  153 tattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||||    
T  29030122 tattaaacaatccttcaaaatttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaataccacaagac 29030035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 32580387 - 32580247
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||| |||||||||||||||||  |||||||||    
T  32580387 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaa 32580288  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  32580287 acaatccttcgaaatttgaatgattttgaataccacaagac 32580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 27899560 - 27899415
Alignment:
Q  42 agtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||||||||  |||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |          |    
T  27899560 agtaaaatcttaa--gaaaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------c 27899473  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  27899472 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccaccagac 27899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 34484025 - 34484160
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  34484025 aaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 34484124  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  34484125 acaatccttcgaaatttgaatgattttgaataccac 34484160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 40897339 - 40897221
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  40897339 aatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 40897240  T
Q  175 tgaatgattttgaatacca 193  Q
    |||||||||||||||||||    
T  40897239 tgaatgattttgaatacca 40897221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 270
Target Start/End: Original strand, 44906508 - 44906720
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||| ||||| ||  |||||| ||||| ||||||||||||||| ||||||||||  |||||||||    
T  44906508 aaaaacaatctcaagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaa 44906607  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  44906608 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 44906707  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  44906708 gagtcttgattga 44906720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 273
Target Start/End: Complemental strand, 26107472 - 26107257
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| |||||| |||||||| ||  |||||| ||||| |||||| |||||||||||||||||||  |||||||||    
T  26107472 aaaaacaatctcaagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaa 26107373  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       || |||| || |||| |||||||||||| ||||||       |||| |||||    
T  26107372 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaattgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 26107273  T
Q  258 gaatcttgattgagta 273  Q
    ||||||||||||||||    
T  26107272 gaatcttgattgagta 26107257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 11431737 - 11431597
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||||||||||||| |||||||  |||||||||    
T  11431737 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaa 11431638  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  11431637 acaatccttcgaaatttaaatgattttgaataccacaagac 11431597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 1440006 - 1440126
Alignment:
Q  118 ctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaag 217  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||       |||||||||||    
T  1440006 ctagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaag 1440105  T
Q  218 agtc-tgattgaataccacaa 237  Q
    |||| ||||||||||||||||    
T  1440106 agtcttgattgaataccacaa 1440126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 22057933 - 22057834
Alignment:
Q  99 ttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactaga 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccactaga 22057834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 54629055 - 54628920
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  54629055 aaaaacaatctcaagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 54628956  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||  |||||||||||||||||||||||||    
T  54628955 acaatcctttgaaatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 50903235 - 50903375
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||| ||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  50903235 aaaaacaatctcaagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 50903334  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  50903335 acaatccttcttaatttgaatgattttgaataccacaagac 50903375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 48379368 - 48379156
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||| || |||||||||||||| ||||| |   |||||| ||||| |||||||||||||||||||||||||   |||||||||    
T  48379368 aaaaacaatctcaagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaa 48379269  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtct-gattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || ||||| ||||||||||| ||||||       |||| |||||    
T  48379268 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtctagattgaatacctcaagacttttttaaaatgacaaa 48379169  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  48379168 gagtcttgattga 48379156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 52080142 - 52079999
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa--caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||      |||||||||||| ||||||||| |||||||||||||||||||     
T  52080142 tagtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc- 52080050  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactaga 198  Q
             ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52080049 ---------tgatttattaaacaatccttcaaaatttgaatgattttgaataccactaga 52079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 240
Target Start/End: Original strand, 51737746 - 51737903
Alignment:
Q  84 ttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgatt 183  Q
    |||| ||||||||||||||| ||  |||||| ||| | ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  184 ttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  51737846 ttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 51737903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 52810589 - 52810449
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  |||||| | ||| |||||||||||||||||||||||||   |||||||||    
T  52810589 aaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaa 52810490  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  52810489 acaatcattcaaaatttgaatgattttgaataccacaagac 52810449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 270
Target Start/End: Original strand, 52617966 - 52618172
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||| ||      |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  52617966 aaaaacaatctcaagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 52618059  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  52618060 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 52618159  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  52618160 gagtcttgattga 52618172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 31646304 - 31646414
Alignment:
Q  84 ttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgatt 183  Q
    |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||| ||| ||||||||||||||    
T  31646304 ttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcgaaatttgaatgatt 31646403  T
Q  184 ttgaataccac 194  Q
    |||||||||||    
T  31646404 ttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 20833187 - 20833063
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    ||||| || ||||||||||| |||||||| ||  |||||| |||||  ||||| |||||||||||||||||||  |||||||||||||||||||| ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||||||| ||||    
T  20833087 tgaatgattttgaataccacaagac 20833063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 270
Target Start/End: Original strand, 10728646 - 10728848
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  10728646 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 10728735  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    ||||||||||||||||||||||||||| |||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  10728736 acaatccttccaaatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 10728835  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  10728836 gagtcttgattga 10728848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  96 actttttcatgccaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaata 190  Q
    ||||||| |||| ||||||||| ||||||||||||||||| |||||||||| |  ||||||||||||||| ||| |||||||||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 10660675 - 10660611
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 10660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 37455062 - 37454932
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| ||  |||||| ||||| ||||||||||||||| ||          |||||||||    
T  37455062 aaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaa 37454973  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  37454972 acaatcattcgaaatttgaatgattttgaataccacaagac 37454932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 39842489 - 39842619
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||| ||  |||||| || ||          |||||||| ||||||||| |||||||||    
T  39842489 aaaaacaatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaa 39842578  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||| |||| ||||||||||||||||||||| ||| ||||    
T  39842579 acaattcttcgaaatttgaatgattttgaatatcacgagac 39842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 44276603 - 44276466
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||| | ||||||||||||  ||||| ||  |||||||||| ||||||||||| |||||| ||  |||||||||||||||||||||||||||||||     
T  44276603 tagtaaacttttaaaagaaaaat-aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca- 44276506  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
             |||||||||||||||||    |||||||||||||||||||||||    
T  44276505 ---------atttattaaacaatcct----aatttgaatgattttgaatacca 44276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 33807678 - 33807733
Alignment:
Q  62 aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttca 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  33807678 aacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 270
Target Start/End: Complemental strand, 39038180 - 39038039
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattga 228  Q
    ||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||| ||||||| ||||       ||||||| || |||| |||||||    
T  39038180 acaaaatccatcaaaatccaatttattaaacaattcttcgaaatttgaatgattttggataccacaagacttttttaaagtgatgaaaagtcttgattga 39038081  T
Q  229 ataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||| ||||||       |||| ||||||| ||||||||||    
T  39038080 atacctcaagacttttttaaaatgacaaagagtcttgattga 39038039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 50762055 - 50762185
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||| ||    
T  50762055 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttatcaa 50762144  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||| ||||||||||||||||||| ||||    
T  50762145 acaatcattcgaaattagaatgattttgaataccacaagac 50762185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 23753463 - 23753593
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||       || |||| || |||| |||||||||||| |||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 23753562  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  23753563 cttttttaaaatgacaaagaatcttgattga 23753593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 539476 - 539539
Alignment:
Q  136 tccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccacaagac 539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 199
Target Start/End: Complemental strand, 6975924 - 6975817
Alignment:
Q  82 tgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatga 181  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||||||||| ||||          ||||| |||| ||| |||| ||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  182 ttttgaataccactagac 199  Q
    ||||||||||||| ||||    
T  6975834 ttttgaataccacaagac 6975817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 23535890 - 23535984
Alignment:
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtctgattgaataccacaa 237  Q
    |||||| ||| ||||||| ||||||| ||||||||||||||||||||||||| ||||       ||||||| |||||| ||||||||| ||||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccacaagactttttttaagtgatgaagagtttgattgaatgccacaa 23535984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 45863052 - 45862983
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcc 128  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||    
T  45863052 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 15492862 - 15492942
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||  ||| ||||| |||  ||||||||||| |||||| ||  ||||||||||||||| |||| ||||||||||    
T  15492862 aaaaacaatctcaagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 48 - 270
Target Start/End: Original strand, 23115152 - 23115374
Alignment:
Q  48 atcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23115152 atcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatc 23115251  T
Q  148 tgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnn 246  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||||||| |||||||||||||||||||          
T  23115252 tgatttattaaacaatccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttt 23115350  T
Q  247 naaataacaaagaatcttgattga 270  Q
     |||| ||||||||||||||||||    
T  23115351 taaatgacaaagaatcttgattga 23115374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 24501788 - 24502019
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24501788 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24501887  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  24501888 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24501987  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| | ||||||||||||||||    
T  24501988 actttttttaaatgataaagaatcttgattga 24502019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 26374405 - 26374636
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26374405 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 26374504  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  26374505 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 26374604  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  26374605 actttttttaaatgacaaagaatcttgattga 26374636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 42938095 - 42938323
Alignment:
Q  44 taaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  42938095 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatca 42938194  T
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacn 241  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||     
T  42938195 aaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagact 42938294  T
Q  242 nnnnnnaaataacaaagaatcttgattga 270  Q
          |||| ||||| ||||||||||||    
T  42938295 ttttttaaatgacaaataatcttgattga 42938323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 2704794 - 2705025
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  2704794 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcca 2704893  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  2704894 tcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 2704993  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  2704994 actttttttaaatgacaaagaatcttgattga 2705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 7506874 - 7507075
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7506874 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7506973  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  7506974 tcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 7507073  T
Q  239 ac 240  Q
    ||    
T  7507074 ac 7507075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 42937582 - 42937353
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  42937582 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcca 42937483  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtctgattgaataccacaaga 239  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  42937482 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc-gattgaataccacaaga 42937384  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||| ||||||||||||    
T  42937383 ctttttttaaatgacaaaaaatcttgattga 42937353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 5576595 - 5576827
Alignment:
Q  41 tagtaaaatcttaaaag-aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5576595 tagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5576694  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||| |||        ||||||||||||||| ||||||||||||||||    
T  5576695 tcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaa 5576794  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||||||||||||||||    
T  5576795 gactttttttaaatgacaaagaatcttgattga 5576827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 238
Target Start/End: Original strand, 42735252 - 42735451
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  42735252 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcca 42735351  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||       ||||||||||||||| | |||||||||||||||    
T  42735352 tcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaag 42735451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 10392217 - 10392443
Alignment:
Q  45 aaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaa 144  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  10392217 aaaatcttaaaagaaaaaaaaatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaa 10392316  T
Q  145 atctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnn 243  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||       |||||||||| |||| |||||||||| |||||||        
T  10392317 atctgatttattaaacaatccttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaattt 10392416  T
Q  244 nnnnaaataacaaagaatcttgattga 270  Q
        |||| ||||||||||||||||||    
T  10392417 tttaaaatgacaaagaatcttgattga 10392443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 41479318 - 41479097
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||          
T  41479318 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaa------ 41479225  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
        ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||       ||||||||||||||| |||||||||||||||||    
T  41479224 ----aatctgatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaag 41479129  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  41479128 actttttttaaatgacaaagaatcttgattga 41479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 43959878 - 43959658
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||| || |||||||||||||||| ||||||||||          |||||||||||    
T  43959878 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcac----------cacaaaatcca 43959789  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |       |||||||||||| || |||||||||| ||||||    
T  43959788 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaag 43959690  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  43959689 acttttttaaaatgacaaagaatcttgattga 43959658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 14782129 - 14782269
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  14782129 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 14782228  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  14782229 acaatccttcaaaatttgaatgattttgaataccacaagac 14782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 44725804 - 44725944
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  44725804 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 44725903  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  44725904 acaatccttcaaaatttgaatgattttgaataccacaagac 44725944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 4403319 - 4403184
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||||||||||||||||||| |  |||||||||    
T  4403319 aaaaacaatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaa 4403220  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  4403219 acaatccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 10295366 - 10295557
Alignment:
Q  51 ttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaa-tccatcaaaatctg 149  Q
    |||||| |||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||||||||| ||||||||||||      
T  10295366 ttaaaaaaaaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatcca 10295465  T
Q  150 atttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  10295466 atttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 10295557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 9288451 - 9288591
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||| ||||||||||  |||||||||    
T  9288451 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaa 9288550  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  9288551 acaatccttcgaaatttgaatgattttgaataccacaagac 9288591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 4949995 - 4950143
Alignment:
Q  44 taaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    |||||| |||||||||||||||||  |||| ||||| |||||| ||||||| | |||||||||| |||||||||||||||||| ||||||| ||||||||    
T  4949995 taaaattttaaaagaaaaaacaattttaagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaa 4950094  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaatacc 192  Q
    ||||| |||||||||| |||| ||  ||| |||||||||||||||||||    
T  4950095 aatctaatttattaaataatcttttgaaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 43166700 - 43166866
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| ||||||||||| |||||||| ||  |||||| ||| | ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  43166700 aatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 43166799  T
Q  175 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||||||||||||| ||||       || |||  ||||||| |||||||||||||||||||    
T  43166800 tgaatgattttgaataccacaagacttttttaaaatgacaaagagtcttgattgaataccacaagac 43166866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 18958737 - 18958861
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    ||||| || |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||| ||||||  ||||||||||||||||||| |||||    
T  18958737 aatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaatt 18958836  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||||||| ||||    
T  18958837 tgaatgattttgaataccacaagac 18958861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 19717875 - 19718015
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||| |||||||||||| ||  |||||| ||||| ||||||||||||||||||| ||||||  |||||||||    
T  19717875 aaaaacaatctcaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaa 19717974  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||| |||| ||||||||||||||||||||||||| ||||    
T  19717975 acaattcttcgaaatttgaatgattttgaataccacaagac 19718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 26856279 - 26856139
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||| || ||||  |||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  26856279 aaaaacaatctcaagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 26856180  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||| |||| ||||||||||||||||||||||||| ||||    
T  26856179 acaatacttcgaaatttgaatgattttgaataccacaagac 26856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 39467478 - 39467602
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||| |||||||||||||||   ||||||||||||||||||| |||||    
T  39467478 aatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaatt 39467577  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||||||| ||||    
T  39467578 tgaatgattttgaataccacaagac 39467602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 32711358 - 32711488
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||    
T  32711358 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 32711457  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  32711458 ctttttttaaatgacaaagaatcttgattga 32711488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 39189793 - 39189940
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||| | |||||||||||| |||||| ||| |||||||||||||||||||||| |||||| ||  ||||||| |||||||||| |  ||||||||||    
T  39189793 tagtaaacttttaaaagaaaaa-caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccat 39189890  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
    |||| ||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  39189891 caaattca-atttattaaacaatccttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 8410416 - 8410526
Alignment:
Q  85 tttcatgaaagactttttcatgccaaaatttcactagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgat 182  Q
    |||| ||||||||||| |||| | |||||||||||| ||||  ||||||||||||||||||| ||  ||||| |||||||||||||||||||| ||||||    
T  8410416 tttcgtgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgat 8410515  T
Q  183 tttgaatacca 193  Q
    |||||||||||    
T  8410516 tttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 13478226 - 13478376
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgtttt-catgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| | |  |||  ||||| ||||||| ||| ||||||||| |||||| |||||||  ||| ||||||| ||||||||||    
T  13478226 tagtaaaatcttaaaagaaaaaa-agttataaaaaatcttatgtttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatcca 13478324  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
     | |||||| ||||||||||||||||||| |||||| || ||||||||||||    
T  13478325 acgaaatctaatttattaaacaatccttcgaaatttaaaagattttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 7466537 - 7466407
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||          |||||||||    
T  7466537 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 7466448  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||| |||| ||||||||||||||||||||||||| ||||    
T  7466447 acaattcttcaaaatttgaatgattttgaataccacaagac 7466407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 199
Target Start/End: Original strand, 18305968 - 18306095
Alignment:
Q  62 aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 161  Q
    |||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||          ||||||||||||    
T  18305968 aacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaaca 18306057  T
Q  162 atccttccaaatttgaatgattttgaataccactagac 199  Q
    ||| ||| ||||||||||||||||||||||||| ||||    
T  18306058 atctttcgaaatttgaatgattttgaataccacaagac 18306095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 32497727 - 32497555
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||||||| || ||  |||||| ||||| ||||||||||||||||||          |||||||||    
T  32497727 aaaaacaatctcaagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaa 32497638  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||| ||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  32497637 acaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 32497555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 16362337 - 16362268
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  16362337 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgagac 16362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 37857260 - 37857191
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||| ||||    
T  37857260 acaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatgaatttgaataccacaagac 37857191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 31623825 - 31623695
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| |||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 31623726  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||| ||||||||||    
T  31623725 cttttttaaaatgacaaagagtcttgattga 31623695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 4031334 - 4031392
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 4031392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 42305850 - 42305914
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||||||| ||||||  ||| ||||||||||||||| |||||||||| ||||||||||||||    
T  42305850 acaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaattattttgaataccac 42305914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 9770434 - 9770503
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcc 128  Q
    |||| |||||||||| ||||||||||||| |||||| | ||||| |||  ||||||||| ||||||||||    
T  9770434 aaaagcaatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 32711305 - 32711346
Alignment:
Q  76 atctcatgttttcatgaaagactttttcatgccaaaatttca 117  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttca 32711346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 44 - 270
Target Start/End: Complemental strand, 21147294 - 21147067
Alignment:
Q  44 taaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21147294 taaaatcttaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaa 21147195  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnn 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||      
T  21147194 aatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactt 21147095  T
Q  243 nnnnnaaataacaaagaatcttgattga 270  Q
         |||| ||||||||||||||||||    
T  21147094 tttttaaatgacaaagaatcttgattga 21147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 33656017 - 33656217
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33656017 tagtaaaatcttaaaagaaaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 33656116  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||        ||||||||||||||| ||||||||||||||||||    
T  33656117 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaaga 33656216  T
Q  240 c 240  Q
    |    
T  33656217 c 33656217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 7016714 - 7016915
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7016714 tagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7016813  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||| |||||    
T  7016814 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 7016913  T
Q  239 ac 240  Q
    ||    
T  7016914 ac 7016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 5272894 - 5273125
Alignment:
Q  41 tagtaaaatcttaaaag-aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||| |||||||||   |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5272894 tagtaaaattttaaaagtaaaaaacaaaattaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5272993  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||       || |||||||||||| ||||||||||||| |||    
T  5272994 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataag 5273093  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  5273094 actttttttaaatgacaaagaatcttgattga 5273125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 27458925 - 27459155
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  27458925 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||       ||||||||||||||| ||||||||||| |||||    
T  27459025 tcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaatactacaag 27459123  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| |||||||||||| |||||    
T  27459124 actttttttaaatgacaaagaatcttaattga 27459155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 849334 - 849177
Alignment:
Q  84 ttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgatt 183  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  184 ttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||| |||||       ||||||||||||||| |||||||||||||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagac 849177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 139504 - 139273
Alignment:
Q  42 agtaaaatcttaaaagaaaaaaca--atcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||||||||| |  ||  |||| ||||||||||||| |||||||||||||||||   ||||||||||| |||||||| ||||||||||    
T  139504 agtaaaatcttaaaagaaaaaaaataattttaagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatcca 139405  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||| |||| ||||||||||||||| |    
T  139404 tcaaaatctggtttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatg 139305  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  139304 actttttttaaatgacaaagaatcttgattga 139273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 32157869 - 32158104
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagact---ttttcatgccaaaatttcactagaaaatcccacaaaat 136  Q
    ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||||   ||||| ||| ||||||| ||||||||||||||||||||    
T  32157869 tagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaat 32157968  T
Q  137 ccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaatacca 234  Q
    || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||| | ||| |||||||||||||    
T  32157969 ccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaatacca 32158068  T
Q  235 caagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||||       |||| ||||||||||||||||||    
T  32158069 caagactttttttaaatgacaaagaatcttgattga 32158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 14000099 - 14000239
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  14000099 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 14000198  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  14000199 acaatccttcaaaatttgaatgattttgaataccacaagac 14000239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 59 - 270
Target Start/End: Original strand, 1152097 - 1152309
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    |||||||||| |||| |||||||| ||||||| |||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  1152097 aaaaacaatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 1152196  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    ||||||| || ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  1152197 acaatccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 1152296  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  1152297 gagtcttgattga 1152309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 98 - 270
Target Start/End: Complemental strand, 6460965 - 6460792
Alignment:
Q  98 tttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactag 197  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactag 6460866  T
Q  198 acnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |        || |||||||||||| ||||||||||| ||| |||       |||| ||||||||||||||||||    
T  6460865 attttttttaaatgattaagagtcttgattgaatacgacatgactttttttaaatgacaaagaatcttgattga 6460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 44 - 235
Target Start/End: Complemental strand, 9689884 - 9689693
Alignment:
Q  44 taaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||   ||||||| || |||||||| |||| ||||||||||    
T  9689884 taaaatcttaaaagaaaaaacaatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaa 9689785  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccac 235  Q
    ||||| |||||| |||||||| ||| |||||| ||||||||| |||||||| ||||       ||||||| ||||||| ||||||||||||||    
T  9689784 aatctaatttatcaaacaatcattcgaaattt-aatgattttaaataccacaagactttttttaagtgatgaagagtcttgattgaataccac 9689693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 13926143 - 13926003
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||| |||| ||||| |||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  13926143 aaaaacaatctcaagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 13926044  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  13926043 acaatccttcgaaatttgaatgattttgaataccacaagac 13926003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 39852557 - 39852417
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||| ||||||||||||||||  ||||| |||    
T  39852557 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaa 39852458  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  39852457 acaatccttcgaaatttgaatgattttgaataccacaagac 39852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 4550245 - 4550391
Alignment:
Q  53 aaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 152  Q
    |||| |||||||||||  ||  |||||||| ||||||||||||||| |||| ||  |||||| ||||| ||||| ||||||||||||||||||||  |||    
T  4550245 aaaaaaaaaaacaatctcaacaaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatt 4550344  T
Q  153 tattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4550345 tattaaacaatccttcgaaatttgaatgattttgaataccacaagac 4550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 7947583 - 7947698
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||| | |||||||||||||||||||| ||  |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||||||||||| |||||    
T  7947583 aatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 7947682  T
Q  175 tgaatgattttgaata 190  Q
    ||||||||||||||||    
T  7947683 tgaatgattttgaata 7947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 14465266 - 14465361
Alignment:
Q  104 atgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||| ||||| | |||||||||| ||||||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccacaagac 14465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 9220696 - 9220883
Alignment:
Q  44 taaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||  ||||||| |||| ||||||| |          |||    
T  9220696 taaaatcttaaaagaaaaaacaatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------caa 9220785  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    | ||| ||| ||||||||||||||  ||||||||||||||||||||| ||  ||||       ||||||| ||||||| |||||||||| ||||||||    
T  9220786 attctaattcattaaacaatccttagaaatttgaatgattttgaatatcataagactttttttaagtgataaagagtcttgattgaatatcacaagac 9220883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 5949310 - 5949185
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  5949310 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 5949221  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  5949220 acaatccttcgaaatttgaatgattttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 270
Target Start/End: Original strand, 4240517 - 4240658
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattga 228  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||    
T  4240517 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattga 4240616  T
Q  229 ataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||| ||||||       |||| ||||||| ||||||||||    
T  4240617 atacctcaagacttttttaaaatgacaaagagtcttgattga 4240658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 1461203 - 1461263
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaata 190  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  1461203 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 1461263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 22746501 - 22746369
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    |||||||||| |||| ||||| || ||||||||||||| |||||| ||  |||||| ||        |||||||||||||||||||||   |||||||||    
T  22746501 aaaaacaatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattaca--------tcccacaaaatccatcaaaattcaatttattaa 22746410  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||| ||| ||||    
T  22746409 acaatcattcgaaatttgaatgattttgaatatcacaagac 22746369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 40013706 - 40013827
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||| ||||||  ||| |||||    
T  40013706 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaa 40013795  T
Q  159 acaatccttccaaatttgaatgattttgaata 190  Q
    |||||||||| |||||||||||||||||||||    
T  40013796 acaatccttcgaaatttgaatgattttgaata 40013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 1511330 - 1511426
Alignment:
Q  45 aaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaaga-ctttttcatgccaaaatttcact-agaaaatcccacaaaatcca 139  Q
    ||||| |||||||||| |||||||||||  ||||| |||||||||| |||||  |||||||||||||||  ||||| | ||||||||||||||||||    
T  1511330 aaaattttaaaagaaataacaatcctaaaaaatcttatgttttcataaaagatttttttcatgccaaaaactcactaaaaaaatcccacaaaatcca 1511426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 270
Target Start/End: Complemental strand, 37014044 - 37013914
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||  ||||||||||||| ||||| ||||||||||||||||||||||| | ||||       ||||||| || |||| |||||||||||| |||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaataccgcaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 37013945  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||| ||||||||||    
T  37013944 ctttttaaaaatgacaaagagtcttgattga 37013914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 15009 - 15240
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15009 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15108  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||| |||||    
T  15109 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15208  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  15209 actttttttaaatgacaaagaatcttgattga 15240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 15652 - 15883
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15652 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15751  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||| |||||    
T  15752 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15851  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  15852 actttttttaaatgacaaagaatcttgattga 15883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 40996624 - 40996855
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  40996624 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 40996723  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||| ||||||||||| |||||||||||||||||    
T  40996724 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaag 40996823  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  40996824 actttttttaaatgacaaagaatcttgattga 40996855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 43581065 - 43581296
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaac-aatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43581065 tagtaaaatcttaaaagaaaaaaataatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 43581164  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||| |||||    
T  43581165 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaag 43581264  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  43581265 actttttttaaatgacaaagaatcttgattga 43581296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 7718345 - 7718538
Alignment:
Q  48 atcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatc 147  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7718345 atcttaaaagaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatc 7718444  T
Q  148 tgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||    
T  7718445 tgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 973416 - 973185
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  973416 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 973317  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |        ||||||||||||||| |||||||||||||||||    
T  973316 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaag 973217  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  973216 actttttttaaatgacaaagaatcttgattga 973185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 30441028 - 30440797
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  30441028 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcca 30440929  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  30440928 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 30440829  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    |        |||| ||||||||||||||||||    
T  30440828 attttttttaaatgacaaagaatcttgattga 30440797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 18914710 - 18914911
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18914710 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 18914809  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  18914810 tcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 18914909  T
Q  239 ac 240  Q
    ||    
T  18914910 ac 18914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 44 - 240
Target Start/End: Original strand, 7719238 - 7719436
Alignment:
Q  44 taaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7719238 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 7719337  T
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||||||    
T  7719338 aaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagac 7719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 41 - 237
Target Start/End: Complemental strand, 34695505 - 34695307
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34695505 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 34695406  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||       ||||||||||||||| ||||||||||||||||    
T  34695405 tcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaa 34695307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 47914498 - 47914267
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47914498 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 47914399  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||||||||||||| ||||||||||||||| |    
T  47914398 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47914299  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  47914298 actttttttaaatgacaaagaatcttgattga 47914267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 44343374 - 44343602
Alignment:
Q  44 taaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44343374 taaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 44343473  T
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacn 241  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||       ||||||||||||||| |||||||||| ||||||||     
T  44343474 aaatctgatttattaaacaatccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagact 44343573  T
Q  242 nnnnnnaaataacaaagaatcttgattga 270  Q
          |||| ||||||||||||||||||    
T  44343574 ttttttaaatgacaaagaatcttgattga 44343602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 47879400 - 47879169
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  47879400 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 47879301  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||       ||||||||||||||| ||||||||||||||| |    
T  47879300 tcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47879201  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  47879200 actttttttaaatgacaaagaatcttgattga 47879169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 270
Target Start/End: Complemental strand, 12893639 - 12893409
Alignment:
Q  44 taaaatcttaaaagaaaaaa---caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  12893639 taaaatcttaaaagaaaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccat 12893540  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||       ||||||||||||||| ||||| ||||||||||||    
T  12893539 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaaga 12893440  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  12893439 ctttttttaaatgacaaagaatcttgattga 12893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 39219352 - 39219552
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39219352 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 39219451  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||       ||||||||||||||| |||||||||| ||||||    
T  39219452 tcaaaatctgatttattaaacaat-catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataacacaag 39219550  T
Q  239 ac 240  Q
    ||    
T  39219551 ac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 20275238 - 20275469
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  20275238 tagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 20275337  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||       ||||||||||||||| ||||||||||||| |||    
T  20275338 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataag 20275437  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| |||| |||||||||||||    
T  20275438 actttttttaaatgacaaggaatcttgattga 20275469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 34009245 - 34009013
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||| ||||||| | |||||||| ||||||||||||    
T  34009245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcca 34009146  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccacta-gacnnnnnnnaagtgattaagagt-ctgattgaataccacaa 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||       ||||||||||||||  ||||||||||||||||    
T  34009145 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattgaataccacaa 34009046  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||| ||||||||||||    
T  34009045 gactttttttaaatgacaaataatcttgattga 34009013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 44 - 194
Target Start/End: Original strand, 32142895 - 32143046
Alignment:
Q  44 taaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32142895 taaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatca 32142994  T
Q  143 aaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32142995 aaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 199
Target Start/End: Complemental strand, 10068689 - 10068533
Alignment:
Q  42 agtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||| |||||||||||| |||||||||  ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  10068689 agtaaaattttaaaagaaaaa-caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 10068591  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10068590 aaaatttaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 10068533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 7113684 - 7113529
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |    
T  7113684 tagtaaaatcctaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatcta 7113585  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccact 195  Q
    ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  7113584 tcaaaatctgatttattaaacaatcctgcgaaatttgaattattttgaataccact 7113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 43679592 - 43679491
Alignment:
Q  94 agactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  194 ct 195  Q
    ||    
T  43679492 ct 43679491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 23101504 - 23101364
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  23101504 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 23101405  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  23101404 acaatccttcgaaatttgaatgattttgaataccacaagac 23101364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 28342553 - 28342413
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  28342553 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 28342454  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  28342453 acaatccttcgaaatttgaatgattttgaataccacaagac 28342413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 3023132 - 3022992
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  3023132 aaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 3023033  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  3023032 acaatccttcgaaatttgaatgattttgaataccacaagac 3022992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 39784305 - 39784165
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  39784305 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 39784206  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  39784205 acaatccttcgaaatttaaatgattttgaataccacaagac 39784165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 43187334 - 43187485
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||| | ||||||||||| ||||||| ||  |||||||||| |||||||||||||||||| ||  |||||||||||||||||||| ||||||| |||    
T  43187334 tagtaaacttttaaaagaaaa-acaatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcat 43187432  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||  |||||||||||||| |||| ||||||||||||||||||||||||    
T  43187433 caaaatccaatttattaaacaatgcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 18838595 - 18838455
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  18838595 aaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 18838496  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  18838495 acaatctttcgaaatttgaatgattttgaataccacaagac 18838455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 29614774 - 29614898
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  29614774 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 29614873  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||| ||| ||||    
T  29614874 tgaatgattttgaatatcacaagac 29614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 12963874 - 12963767
Alignment:
Q  92 aaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
    |||||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  192 cactagac 199  Q
    ||| ||||    
T  12963774 cacgagac 12963767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 28034799 - 28034939
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||  ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  28034799 aaaaacaatctcaagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 28034898  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  |||||||||| |||||||||||||| ||||    
T  28034899 acaatcctttgaaatttgaataattttgaataccacaagac 28034939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 33382855 - 33382709
Alignment:
Q  46 aaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaa 145  Q
    |||| |||||||||||| |||||  ||  |||||||| ||||||| |||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||    
T  33382855 aaattttaaaagaaaaa-caatctaaataaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaa 33382757  T
Q  146 tctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    ||  ||||||||||||||||||| |||||| |||||||||||||||||    
T  33382756 tccaatttattaaacaatccttcgaaatttaaatgattttgaatacca 33382709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 7993348 - 7993214
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||| || |||||||||||||||||||| ||  |||||| ||||| ||||||||||| |||||||||||||   |||||||||    
T  7993348 aaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaa 7993249  T
Q  159 acaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||||| ||||||||||||||||||||||||    
T  7993248 acaatccttcgaaatttgaatgattttgaatacca 7993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 270
Target Start/End: Original strand, 9882231 - 9882442
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||| |   |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  9882231 aaaaacaatctcaagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 9882329  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||| ||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  9882330 acaatcattcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 9882429  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  9882430 gagtcttgattga 9882442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 8675539 - 8675357
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||| ||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  8675539 aaaaacaatctcaagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 8675440  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||| || ||| |||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  8675439 acaatccttcgaagtttaaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 8675357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 9180076 - 9179874
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||          |||||||||    
T  9180076 aaaaacaatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttattaa 9179987  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    ||||||||||  ||||| | |||||||| ||||||| ||||       ||||||| ||||||| ||||||||||| |||| ||       |||| |||||    
T  9179986 acaatccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaa 9179887  T
Q  258 gaatcttgattga 270  Q
    |||||||||||||    
T  9179886 gaatcttgattga 9179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 12740577 - 12740439
Alignment:
Q  60 aaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 159  Q
    ||||||||| |||| |||||||| |||| |||||||||||| || ||  |||||| ||||| |||||||||||||||| |||||||||  ||||||||||    
T  12740577 aaaacaatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaa 12740479  T
Q  160 caatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||  ||||||||||||||||||||||||| ||||    
T  12740478 caatcctttgaaatttgaatgattttgaataccacgagac 12740439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 31639015 - 31638910
Alignment:
Q  132 aaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaat 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||| ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  231 accaca 236  Q
    ||||||    
T  31638915 accaca 31638910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 3797049 - 3797263
Alignment:
Q  46 aaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaa 145  Q
    |||| |||||||||||| |||||||||| ||||| |||||||| | |||||||||||||||| |||||||||||||||||||         |||||||||    
T  3797049 aaattttaaaagaaaaa-caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatc---------ccatcaaaa 3797137  T
Q  146 tctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnn 244  Q
    ||| ||||||||||||||||||| |||||| |||||| ||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||        
T  3797138 tctaatttattaaacaatccttcaaaattttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagactttt 3797237  T
Q  245 nnnaaataacaaagaatcttgattga 270  Q
       |||| ||||||| ||||||||||    
T  3797238 ttaaaatgacaaagagtcttgattga 3797263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 727692 - 727587
Alignment:
Q  83 gttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgat 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||||  |||||||||||||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa----------aatctgatttattaaacaatcctttgaaatttgaatgat 727603  T
Q  183 tttgaataccactaga 198  Q
    ||||||||| ||||||    
T  727602 tttgaatactactaga 727587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  95 gactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||| |||   ||||||||||||||||| | |||||||||||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 37972861 - 37972981
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| | |||||| |||||||||||||||||||| ||  |||||| ||||| |||||||| |||||||||||||||||  |||||||||    
T  37972861 aaaaacaatctcaagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaa 37972960  T
Q  159 acaatccttccaaatttgaat 179  Q
    | |||||||| ||||||||||    
T  37972961 ataatccttcgaaatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 41827510 - 41827390
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||| ||||| ||  |||||| ||||| | ||||||||||||||||||||||||  |||||||||    
T  41827510 aaaaacaatctcaagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaa 41827411  T
Q  159 acaatccttccaaatttgaat 179  Q
    |||||||||| || |||||||    
T  41827410 acaatccttcaaattttgaat 41827390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 1470213 - 1470362
Alignment:
Q  43 gtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    ||||||||||||||||||||| |||| ||| | ||||||  |||||||  ||||| |||||||||| ||||||| |  |||||||||||||||| | |||    
T  1470213 gtaaaatcttaaaagaaaaaaacaatgctaggaaatctc--gttttcaaaaaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatc 1470309  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||| ||| |||||||||| |||  ||||||||| |||||||||||||||    
T  1470310 aaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 19810995 - 19810874
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||||||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||||          |||||||||    
T  19810995 aaaaacaatctcaagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaa 19810906  T
Q  159 acaatccttccaaatttgaatgattttgaata 190  Q
    |||||| ||  |||||||||||||||||||||    
T  19810905 acaatcatttgaaatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 10676464 - 10676596
Alignment:
Q  109 aaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaa 208  Q
    |||||||||| ||||||| ||| |||||||||| |||||  ||||||||||||||||||| |||||||||||||||||||||| |  ||||       ||    
T  10676464 aaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatacaatgagactttttttaa 10676563  T
Q  209 gtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||| || |||| |||||||||||||||||||    
T  10676564 gtgatgaaaagtcttgattgaataccacaagac 10676596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 44256776 - 44256895
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||| |||||| |||||||| ||  |||||| ||||  ||||||| ||||||| |||| |||||  ||||||||||||||| ||| |||||    
T  44256776 aatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaatt 44256875  T
Q  175 tgaatgattttgaataccac 194  Q
    ||||||||||||||||||||    
T  44256876 tgaatgattttgaataccac 44256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 32883938 - 32883848
Alignment:
Q  109 aaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||||| |||||||||| |||||||||||||||  ||||| ||||||||| ||| ||||||||||||||||||||||||| ||||    
T  32883938 aaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccacaagac 32883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 199
Target Start/End: Complemental strand, 19251734 - 19251605
Alignment:
Q  60 aaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 159  Q
    |||| ||||| ||| ||| ||| ||||||||||||||||||||  ||| |||||||||| |||||||||  |||||||||          ||||||||||    
T  19251734 aaaataatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaa 19251645  T
Q  160 caatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  19251644 caatccttcgaaatttgaatgattttgaataccacgagac 19251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 44121965 - 44122029
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  44121965 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 44122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 509852 - 509722
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||  ||||          ||||||||||||||||||  |||||||||    
T  509852 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaatcccact----------acaaaatccatcaaaatccaatttattaa 509763  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  509762 acaatcgttcgaaatttgaatgattttgaataccacaagac 509722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 40460772 - 40460841
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  40460772 acaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccacaagac 40460841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 46405494 - 46405607
Alignment:
Q  128 ccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgatt 226  Q
    ||||||||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 46405593  T
Q  227 gaataccacaagac 240  Q
    ||||||| ||||||    
T  46405594 gaatacctcaagac 46405607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 29585649 - 29585586
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    ||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  29585649 acaaaatccatcaaaatccaaattattaaacaatccttcaaaatttgaatgattttgaatacca 29585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 37328062 - 37327993
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||||||||||   ||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 37327993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  81 atgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 159  Q
    ||||||| ||||||||||| ||  | | ||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 47066828 - 47066770
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 47066770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 17001099 - 17001152
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 17001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 33892315 - 33892426
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattga 228  Q
    ||||||| ||| ||||||  ||||||| ||||||| ||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||    
T  33892315 acaaaattcataaaaatccaatttatttaacaatcattcgaaatttgaatgattttgaataccacaagactttgtttaagtgatgaaaagtcttgattga 33892414  T
Q  229 ataccacaagac 240  Q
    ||||| ||||||    
T  33892415 atacctcaagac 33892426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 39028232 - 39028163
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||| |||  |||||||| ||||||||||| ||| ||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaataacacaagac 39028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  135 atccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||||||  ||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 31639082 - 31639031
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatg 91  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  31639082 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatg 31639031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 270
Target Start/End: Original strand, 44623300 - 44623482
Alignment:
Q  79 tcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaa 178  Q
    |||| |||| |||| |||||||||||| | |||||||||||||||||| ||||||||| ||          |||||||||||| || ||  |||| ||||    
T  44623300 tcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattca----------atttattaaacagtctttagaaatatgaa 44623389  T
Q  179 tgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||||||||||| ||| ||||       ||||||| ||||||| ||||| |||||||||||||       |||| ||||||| ||||||||||    
T  44623390 tgattttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattga 44623482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 25331361 - 25331130
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25331361 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 25331262  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||       ||||||||||||||| |||||||||||||||||    
T  25331261 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaag 25331162  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  25331161 actttttttaaatgacaaagaatcttgattga 25331130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 41881056 - 41881290
Alignment:
Q  41 tagtaaaatcttaaaagaaaa---aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatc 137  Q
    |||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41881056 tagtaaaatcttaaaagaaaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatc 41881155  T
Q  138 catcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccac 235  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||        ||||||||||||||| ||||||||||||||    
T  41881156 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccac 41881255  T
Q  236 aagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||||       |||| ||||||||||||||||||    
T  41881256 aagactttttttaaatgacaaagaatcttgattga 41881290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 55303077 - 55302842
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-----caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaa 135  Q
    |||||||||||||||||||||||     ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  55303077 tagtaaaatcttaaaagaaaaaaaacaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaata 55302978  T
Q  136 tccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaatacca 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||    
T  55302977 tccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacca 55302878  T
Q  235 caagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    || |||       |||| ||||||||||||||||||    
T  55302877 catgacttttttaaaatgacaaagaatcttgattga 55302842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 42786913 - 42786713
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||||||    
T  42786913 tagtaaaatcttaaaagaaaaaacaatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccat 42786814  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||       || |||||||||||| ||||||||||||||||||    
T  42786813 caaaatatgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaaga 42786714  T
Q  240 c 240  Q
    |    
T  42786713 c 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 1045035 - 1044836
Alignment:
Q  43 gtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||       ||||||||||||||| |||||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1044836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 32950811 - 32951043
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaa--tcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||||||||| ||  || |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |    
T  32950811 tagtaaaatcttaaaagaaaaaaaaaaatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattc 32950910  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||     
T  32950911 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacat 32951010  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||| ||||||||||||    
T  32951011 gactttttttaaatgacaaataatcttgattga 32951043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 12113176 - 12112944
Alignment:
Q  41 tagtaaaatctt-aaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  12113176 tagtaaaatctttaaaagaaaaaaacaatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcc 12113077  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tctgattgaataccacaa 237  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||       ||||||||||||| | ||||||||||||||||    
T  12113076 attaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaa 12112977  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||||||||||||||||    
T  12112976 gactttttttaaatgacaaagaatcttgattga 12112944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 34228559 - 34228790
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34228559 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 34228658  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaag-agtctgattgaataccacaag 238  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||       ||||||||||| | | ||||||||||||||| |    
T  34228659 tcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatg 34228758  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  34228759 actttttttaaatgacaaagaatcttgattga 34228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 1113121 - 1112892
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  1113121 tagttaaatcttaaga-aaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccat 1113023  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||||    
T  1113022 caaaatctgatttattaaacaatcatttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaaga 1112923  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  1112922 ctttttttaaatgacaaagaatcttgattga 1112892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 41 - 236
Target Start/End: Original strand, 30009653 - 30009850
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30009653 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 30009752  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||       ||||||||||||||| |||||||||||||||    
T  30009753 tcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 30009850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 7007605 - 7007373
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa--caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    |||||||||||||||||||||||  ||||| |||| |||||||||||||||||||| |  ||||||||| |||||||||||||||||||||||||||| |    
T  7007605 tagtaaaatcttaaaagaaaaaaaacaatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattc 7007506  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||     
T  7007505 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacat 7007406  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||| ||||||||||||||    
T  7007405 gactttttttaaatgacagagaatcttgattga 7007373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 22202245 - 22202014
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22202245 tagtaaaattttaaaagaaaaaaacaatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22202146  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||| | ||||||||||||||| ||  |||||| |||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  22202145 tcaaaattttatttattaaacaatcttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 22202046  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  22202045 actttttttaaatgacaaagaatcttgattga 22202014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 39479332 - 39479564
Alignment:
Q  42 agtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac--nnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || |         ||||||||||||||| ||||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaa 39479531  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| |||| |||||||||||||    
T  39479532 gactttttttaaatgacaaggaatcttgattga 39479564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 37046425 - 37046659
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa--caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaattt-cactagaaaatcccacaaaatc 137  Q
    |||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  37046425 tagtaaaatcttaaaagaaaaaaaacaatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatc 37046524  T
Q  138 catcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccac 235  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||        ||||||||||||||| ||||||||||||||    
T  37046525 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccac 37046624  T
Q  236 aagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    || ||       |||| ||||||||||||||||||    
T  37046625 aaaactttttttaaatgacaaagaatcttgattga 37046659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 41321038 - 41320881
Alignment:
Q  43 gtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagac 41320881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 268
Target Start/End: Original strand, 31314719 - 31314933
Alignment:
Q  42 agtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||              
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca---------- 31314808  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtctgattgaataccacaagac 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||   ||||||||||||||||    
T  31314809 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc---ttgaataccacaagac 31314905  T
Q  241 nnnnnnnaaataacaaagaatcttgatt 268  Q
           |||| ||||||||||||||||    
T  31314906 tttttttaaatgacaaagaatcttgatt 31314933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 3436823 - 3436623
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||| |||||||||||  |||||||||||| ||||||||||||||| ||    
T  3436823 tagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattca 3436724  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||        || |||||||||||| |||||||||| ||||||    
T  3436723 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccattagattttttttaaatgattaagagtcttgattgaatatcacaag 3436624  T
Q  239 a 239  Q
    |    
T  3436623 a 3436623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 46635624 - 46635849
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||      
T  46635624 tagtaaaattttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc-- 46635721  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
        ||||| ||||||||||||||||||| |||||||||||||||||||||| |||| ||       ||||||||||||||| |||||||||||||||||    
T  46635722 ----aatcttatttattaaacaatccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaag 46635817  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  46635818 actttttttaaatgacaaagaatcttgattga 46635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 24130957 - 24131179
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagacttttt-catgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||    
T  24130957 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcc 24131056  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    |||||||||||||||||||||||||| ||| |||          |||||||||||||||||       ||||||||||||||| ||||||||||||||||    
T  24131057 atcaaaatctgatttattaaacaatcattcgaaa----------tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaa 24131146  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||||||||||||||||    
T  24131147 gactttttttaaatgacaaagaatcttgattga 24131179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 28541874 - 28541697
Alignment:
Q  94 agactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  194 ctagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||||       ||||||||||||||| |||||||||||||| ||||       |||| ||||||||||||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaataccacgagactttttttaaatgacaaagaatcttgattga 28541697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 25446227 - 25446080
Alignment:
Q  93 aagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacc 192  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  193 actagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||||       ||||||||||||||| ||||||||||||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaaga 25446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 27454061 - 27454210
Alignment:
Q  48 atcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaat 146  Q
    |||||||||||||| ||||||| |||  ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  27454061 atcttaaaagaaaaaaacaatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaat 27454160  T
Q  147 ctgatttattaaacaatccttccaaatttgaatgattttgaataccacta 196  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  27454161 ctgatttattaaataatctttcaaaatttgaatgattttgaataccacta 27454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 53276069 - 53275868
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttca-tgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||||||||||||  ||||| | ||||| | |||||||||||||||||| ||||||| | ||||||||| |||||||||||    
T  53276069 tagtaaaatcttaaaagaaaaaacaatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatcca 53275970  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||       |||||||||| | || ||||||||||| |||||    
T  53275969 tcaaaatctgatttattacacaatccttcgaaatttgaatgattttaaatatcactagactttttttaagtgattaaaaatcttgattgaatactacaag 53275870  T
Q  239 ac 240  Q
    ||    
T  53275869 ac 53275868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 7249795 - 7249900
Alignment:
Q  94 agactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  194 ctagac 199  Q
    ||||||    
T  7249895 ctagac 7249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 85 - 270
Target Start/End: Original strand, 19740929 - 19741115
Alignment:
Q  85 tttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattt 184  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  185 tgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    | |||||||| ||||       |||||||||| |||| ||| ||||||||||| |||       |||| ||||||||||||||||||    
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattga 19741115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 5441615 - 5441475
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  5441615 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 5441516  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  5441515 acaatccttcgaaatttgaatgattttgaataccacaagac 5441475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 27768267 - 27768127
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  27768267 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 27768168  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  27768167 acaatccttcgaaatttgaatgattttgaataccacaagac 27768127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 54341355 - 54341215
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  54341355 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 54341256  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  54341255 acaatccttcgaaatttgaatgattttgaataccacaagac 54341215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 37828397 - 37828537
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| |   |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  37828397 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 37828496  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  37828497 acaatccttcgaaatttgaatgattttgaataccacaagac 37828537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 48261338 - 48261198
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  48261338 aaaaacaatctcaagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 48261239  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  48261238 acaatccttcaaaatttgaatgattttgaataccacaagac 48261198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 9163292 - 9163147
Alignment:
Q  45 aaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaa 144  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||        ||||||| |||||||||||||||||| |||||||||||||||||    
T  9163292 aaaatcttaaaa-aaaaaacaatcataagaaatctcatgttttcatga--------ttcatgctaaaatttcactagaaaattccacaaaatccatcaaa 9163202  T
Q  145 atctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    || | ||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  9163201 atttaatttattaaacaatccttcgaaatttgaatgattttgaatatcacaagac 9163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 40537136 - 40537280
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaa-tcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||    
T  40537136 tagtaaaatcttaaaaaaaaaaaaaaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatcca 40537225  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  40537226 tcaaaatcagatttattaaacaatcattcgaaatttaaatgattttgaataccac 40537280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 23465116 - 23464993
Alignment:
Q  109 aaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaa 208  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||       ||    
T  23465116 aaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttattttaa 23465017  T
Q  209 gtgattaagagtc-tgattgaata 231  Q
    ||||||||||||| ||||||||||    
T  23465016 gtgattaagagtcttgattgaata 23464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 44770864 - 44770982
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    ||||||||||  ||||||||||||||||| |   ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||    
T  44770864 aatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaatt 44770963  T
Q  175 tgaatgattttgaatacca 193  Q
    |||||||||||||||||||    
T  44770964 tgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 51321132 - 51320920
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| ||  |||||| ||||| |||||  |||||||||||||||||||  |||||||||    
T  51321132 aaaaacaatctcaagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaa 51321033  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaa 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| |||||    
T  51321032 acaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaa 51320933  T
Q  258 gaatcttgattga 270  Q
    || ||||||||||    
T  51320932 gagtcttgattga 51320920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 54853463 - 54853603
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  54853463 aaaaacaatctcaagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 54853562  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  |||||||||| |||||||||||||| ||||    
T  54853563 acaatcctttgaaatttgaataattttgaataccacaagac 54853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 39307234 - 39307430
Alignment:
Q  45 aaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaa 144  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| || | | |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  39307234 aaaatcttaaaagaaaaaacaattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaa 39307333  T
Q  145 atctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |    ||| |||||| |||| ||  |||||||||||||| |||||||||| ||||       || |||| |||| || |||||||||||||||||||    
T  39307334 actcaattcattaaataatctttagaaatttgaatgattatgaataccacaagactttttttaaatgatgaagaatcttgattgaataccacaagac 39307430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 25504696 - 25504815
Alignment:
Q  121 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  221 c-tgattgaataccacaaga 239  Q
    | |||||||||| |||||||    
T  25504796 cttgattgaatatcacaaga 25504815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 75 - 240
Target Start/End: Complemental strand, 37916022 - 37915856
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    ||||| || |||||||||| ||||||||| ||  |||| | ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  37916022 aatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 37915923  T
Q  175 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    |||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  37915922 tgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 37915856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 32322302 - 32322162
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||| ||||| |   |||||| ||||| |||||||||||||||||||||||||   |||||||||    
T  32322302 aaaaacaatctcaagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaa 32322203  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  32322202 acaatccttcgaaatttgaatgattttgaataccacaagac 32322162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 8712094 - 8711978
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||| |||||||||||| |||||  ||| ||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  8712094 tagtaaaattttaaaagaaaaa-caatctcaagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccat 8711996  T
Q  141 caaaatctgatttattaa 158  Q
    |||||||  |||||||||    
T  8711995 caaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 193
Target Start/End: Complemental strand, 12913442 - 12913301
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||| | ||||||||||||  | ||| ||| |||||||||| ||||||||| |||||||| ||  |||||||||||||||||||||||||||||||     
T  12913442 tagtaaacttttaaaagaaaaataattcc-aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca- 12913345  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
             ||||||||||||||||||| ||||||||||||||||||||||||    
T  12913344 ---------atttattaaacaatccttcaaaatttgaatgattttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 23987415 - 23987285
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||| |||||||||    
T  23987415 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttattaa 23987326  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  23987325 acaatccttcgaaatttgaatgattttgaataccacaagac 23987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 24736546 - 24736447
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||||||||||||||||||||||| ||| ||  ||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  24736546 aaaaacaatcacaagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 193
Target Start/End: Original strand, 56445350 - 56445474
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||||| || ||||||||||||||| ||| ||| |||||||||||||||||||||||||||          |||||||||    
T  56445350 aaaaacaatctcaagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaa 56445439  T
Q  159 acaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||| ||| ||||||||||||||||||||||||    
T  56445440 acaatcattcgaaatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 11090532 - 11090435
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||| | |||||||||| |||||||||| ||||||||||||| || ||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  11090532 tagtaaaatttaaaaagaaaaa-caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 41725317 - 41725196
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||| ||||||||||  ||   |||||||||||||| |||||    
T  41725317 aatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaaaatt 41725221  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||| ||| ||||    
T  41725220 tgaatgattttgaatatcacaagac 41725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 28371085 - 28371001
Alignment:
Q  109 aaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacca 193  Q
    |||||||||||||||||||||||||||| || ||||||   ||||||||||||||||||  ||||||||||||||||||||||||    
T  28371085 aaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 29649731 - 29649844
Alignment:
Q  128 ccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgatt 226  Q
    ||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgatt 29649830  T
Q  227 gaataccacaagac 240  Q
    ||||||| ||||||    
T  29649831 gaatacctcaagac 29649844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 36479221 - 36479366
Alignment:
Q  42 agtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||| ||||||||||||  ||||  ||| |||||||||||||||| |||||||||||  ||| ||||||||||||           ||||||||||    
T  36479221 agtaaaattttaaaagaaaaat-aatctcaagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatc 36479308  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||  |||||||||| |||||||| |||||||||| |||||||||||||| ||||    
T  36479309 aaaatccaatttattaaataatccttcgaaatttgaataattttgaataccacgagac 36479366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 30967303 - 30967434
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 157  Q
    |||||||||||  ||| ||||| || ||||||||||||| |||||| ||  |||||| ||||| ||||||||||||||||||          ||||||||    
T  30967303 aaaaaacaatctcaagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttatta 30967392  T
Q  158 aacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||  ||||||||||||||||||||||||| ||||    
T  30967393 aacaatcctttgaaatttgaatgattttgaataccacaagac 30967434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 41581795 - 41581923
Alignment:
Q  70 taaggaatctcatgttttcatgaaagacttttt-catgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 168  Q
    |||| |||||||||||| ||||||| | ||||| ||||  ||||||||||||||||||||||||||||  |||  ||||  ||||||||||||||  |||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  169 caaatttgaatgattttgaataccactagac 199  Q
     |||||||||||| | | |||||||| ||||    
T  41581893 aaaatttgaatgactctaaataccacgagac 41581923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 20021494 - 20021424
Alignment:
Q  109 aaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaat 179  Q
    ||||||||| || ||||||||| |||||||| |||||||| ||||||||||||||||||  ||||||||||    
T  20021494 aaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaaatttgaat 20021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 28484099 - 28483928
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||| |||| |||| |||||| | |||||||||||||||||||| ||   ||||| ||||| ||||||| ||||||||||          |||||||||    
T  28484099 aaaaataatcttaagaaatctcgtcttttcatgaaagactttttcttg-ttaaattacactacaaaatcctacaaaatcca----------atttattaa 28484011  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    | |||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  28484010 ataatccttcgaaatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 28483928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 32684065 - 32684123
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 32684123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 49834890 - 49834948
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 49834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 50018391 - 50018322
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  50018391 acaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatcttgaataccacaagac 50018322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 5800107 - 5800049
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  5800107 caaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccacaagac 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 49501514 - 49501646
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcat--gaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatt 156  Q
    ||||||||||  ||| |||||||| |||| ||  ||||||||||||| ||  |||||| ||||| ||||| ||||||||||||          |||||||    
T  49501514 aaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttatt 49501603  T
Q  157 aaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||    
T  49501604 aaacaatcattcgaaatttgaatgattttgaatgccacaagac 49501646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 49507579 - 49507711
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcat--gaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatt 156  Q
    ||||||||||  ||| |||||||| |||| ||  ||||||||||||| ||  |||||| ||||| ||||| ||||||||||||          |||||||    
T  49507579 aaaaacaatctcaagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttatt 49507668  T
Q  157 aaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||    
T  49507669 aaacaatcattcgaaatttgaatgattttgaatgccacaagac 49507711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 191
Target Start/End: Original strand, 13400785 - 13400935
Alignment:
Q  43 gtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatca 142  Q
    |||| ||||||||||||| |||||||   || ||||||||||||| ||  |||| ||||| |||  ||| ||||| || |||||| |||||||| |||||    
T  13400785 gtaagatcttaaaagaaataacaatctatagaaatctcatgttttaatagaagatttttttatgaaaaattttcattaaaaaatctcacaaaattcatca 13400884  T
Q  143 aaatctgattta--ttaaacaatccttccaaatttgaatgattttgaatac 191  Q
    ||| |  |||||  |||||| |||| || ||||| ||||| |||| |||||    
T  13400885 aaacccaatttattttaaactatccctcaaaattagaatgtttttcaatac 13400935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 32684019 - 32684072
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcc 128  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||    
T  32684019 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 32684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 36727944 - 36728023
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    |||||||||||  ||  |||||||||| | ||||||||| |||||| ||  |||||||||||| ||||||| |||||||||    
T  36727944 aaaaaacaatctcaaaaaatctcatgtct-catgaaagattttttcttgttaaaatttcactaaaaaatcctacaaaatcc 36728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 6e-77; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 19451784 - 19452015
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19451784 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19451883  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| ||||| |||||||||||    
T  19451884 tcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaag 19451983  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  19451984 actttttttaaatgacaaagaatcttgattga 19452015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 21222371 - 21222140
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  21222371 tagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 21222272  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||       ||||||||||||||| |||||||||||||||||    
T  21222271 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaag 21222172  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||||||||||||||||    
T  21222171 actttttttaaatgacaaagaatcttgattga 21222140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 49198245 - 49198475
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49198245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 49198344  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtctgattgaataccacaaga 239  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||       |||||||||||||||| |||||||||||||| |    
T  49198345 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaagagtcttattgaataccacaaaa 49198444  T
Q  240 cnnnnnnnaaataacaaagaatcttgattga 270  Q
    |       |||| ||||||||||||||||||    
T  49198445 ctttttttaaatgacaaagaatcttgattga 49198475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 50192526 - 50192758
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50192526 tagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 50192625  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||    
T  50192626 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaa 50192725  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| |||| |||||||||||||    
T  50192726 gacttttttaaaatgacaaggaatcttgattga 50192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 41 - 236
Target Start/End: Original strand, 45759985 - 45760182
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  45759985 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 45760084  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||    
T  45760085 tcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 45760182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 42 - 270
Target Start/End: Original strand, 6304227 - 6304460
Alignment:
Q  42 agtaaaatcttaaaagaaaa---aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcc 138  Q
    ||||||||||||||||||||   ||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6304227 agtaaaatcttaaaagaaaaaaaaacaatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 6304326  T
Q  139 atcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag--tctgattgaataccaca 236  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||  | || ||||||||||||    
T  6304327 atcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccaca 6304426  T
Q  237 agacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||       |||| ||||||||||||||||||    
T  6304427 agactttttttaaatgacaaagaatcttgattga 6304460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 47654327 - 47654559
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||||    
T  47654327 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcca 47654426  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac-nnnnnnnaagtgattaagag-tctgattgaataccacaa 237  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||        ||||||||||||| | ||||||||||||||||    
T  47654427 tcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaa 47654526  T
Q  238 gacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||       |||| ||||||||||||||||||    
T  47654527 gacttcttttaaatgacaaagaatcttgattga 47654559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 28824349 - 28824579
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||  |||||||| ||||||||||||||||||||||    
T  28824349 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcca 28824448  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||       ||||||||||||||| |||||||||||||||||    
T  28824449 tcaaaatctgatttattaaacaat-cttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaag 28824547  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       |||| ||||| ||||||||||||    
T  28824548 actttttttaaatgacaaataatcttgattga 28824579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 35279875 - 35279665
Alignment:
Q  61 aaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaac 160  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35279875 aaacaattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaac 35279776  T
Q  161 aatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaaga 259  Q
    |||||||| |||||| |||||||||||||||||||||||       |||||||||| |||| |||||||||||||||||||       |||| |||||||    
T  35279775 aatccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaaga 35279676  T
Q  260 atcttgattga 270  Q
    |||||||||||    
T  35279675 atcttgattga 35279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 41 - 236
Target Start/End: Complemental strand, 47780935 - 47780738
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||| ||||||||       ||||||||||||||| |||||||||||||||    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccaca 47780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 35679102 - 35679335
Alignment:
Q  41 tagtaaaatcttaaaagaaaaa---acaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatc 137  Q
    ||||||||||||||||||||||   |||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||    
T  35679102 tagtaaaatcttaaaagaaaaagaaacaatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatc 35679201  T
Q  138 catcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||       ||||||||||||||| ||||||||||| |||    
T  35679202 catcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactaca 35679301  T
Q  237 agacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||        |||| ||||||||||||||||||    
T  35679302 agattttttttaaatgacaaagaatcttgattga 35679335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 237
Target Start/End: Complemental strand, 45536156 - 45535970
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttc------atgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgat 151  Q
    |||||||||||||||| ||||||||||||||      ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45536156 aaaaaacaatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgat 45536057  T
Q  152 ttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaa 237  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||       ||| ||||||||||| ||||||||||||||||    
T  45536056 ttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaa 45535970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 29556328 - 29556097
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgt-tttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||| |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || ||||||||| |||||||||||| ||||||||    
T  29556328 tagttaaatcttaaaagaaaaaacaatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatcca 29556229  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||        ||||||||||||||| |||||||||| ||||||    
T  29556228 tcaaaatctaatttattaaacaatctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaag 29556129  T
Q  239 acnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||       ||||||||| ||||||| |||||    
T  29556128 actttttttaaataacaatgaatcttaattga 29556097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 31572174 - 31572327
Alignment:
Q  42 agtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    |||||||||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 32588936 - 32589129
Alignment:
Q  42 agtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||||||||||||||||||||||      |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  32588936 agtaaaatcttaaaagaaaaaacaatca-----aatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatc 32589030  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaaga 239  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||       ||||||| ||||||| ||||||||| ||||||||    
T  32589031 aaaatccgatttattaaacaatccttcaaaatttgaatgattttgaataccacaagacttcttttaagtgatgaagagtcttgattgaatgccacaaga 32589129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 53 - 236
Target Start/End: Complemental strand, 49418295 - 49418111
Alignment:
Q  53 aaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 152  Q
    |||| |||||| ||| ||||| |||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  49418295 aaaaaaaaaaaaaattctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatt 49418196  T
Q  153 tattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||       ||||||||||||||| | |||||||||||||    
T  49418195 tattaaacaatcctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccaca 49418111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 42 - 199
Target Start/End: Original strand, 9577411 - 9577567
Alignment:
Q  42 agtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||    
T  9577411 agtaaaattttaaaagaaaa-acaatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatc 9577509  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||  ||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  9577510 aaaatccaatttattaaacaatccttctaaatttgaatgattttgaatatcacaagac 9577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 33025726 - 33025536
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccat 140  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||           
T  33025726 tagtaaaatcttaaaagaaaacacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa------- 33025634  T
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag--tctgattgaataccacaag 238  Q
       |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||       |||||||||||||  | |||||||||||||||||    
T  33025633 ---aatctgatgtattaaacaatccttcaaaatttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaag 33025537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 730314 - 730141
Alignment:
Q  99 ttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactaga 198  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  199 c-nnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |        ||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattga 730141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 6312779 - 6312639
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  6312779 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 6312680  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  6312679 acaatccttcgaaatttgaatgattttgaataccacaagac 6312639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 29396383 - 29396523
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  29396383 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 29396482  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  29396483 acaatccttcgaaatttgaatgattttgaataccacaagac 29396523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 48177457 - 48177597
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  48177457 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 48177556  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  48177557 acaatcattcgaaatttgaatgattttgaataccacaagac 48177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 51701769 - 51701645
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  51701769 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatt 51701670  T
Q  175 tgaatgattttgaataccactagac 199  Q
    |||||||||||||||||||| ||||    
T  51701669 tgaatgattttgaataccacaagac 51701645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 37014622 - 37014817
Alignment:
Q  45 aaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaa 144  Q
    |||||||||| ||||||| ||||| |||| ||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  37014622 aaaatcttaagagaaaaa-caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaa 37014720  T
Q  145 atctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagt-ctgattgaataccacaagac 240  Q
    ||   |||||| |||||||| ||  ||||||||||||||||||||| ||| ||||       ||||||| |||| |  |||||||||||||||||||    
T  37014721 attcaatttataaaacaatctttagaaatttgaatgattttgaatatcacaagactttttttaagtgatgaagaatattgattgaataccacaagac 37014817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 25612362 - 25612222
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  ||||||  |||| ||||||||||||||||||||||||||  |||||||||    
T  25612362 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaa 25612263  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  25612262 acaatcctttgaaatttgaatgattttgaataccacaagac 25612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 9322495 - 9322630
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||| |||||||||||||||   |||||||||    
T  9322495 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaa 9322594  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||||||||||||||||    
T  9322595 acaatccttctaaatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 48524490 - 48524346
Alignment:
Q  93 aagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatacc 192  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaatatc 48524391  T
Q  193 actagacnnnnnnnaagtgattaagag-tctgattgaataccaca 236  Q
    || ||||       ||||||||||||| | ||||| |||||||||    
T  48524390 acaagactttttttaagtgattaagagttttgattaaataccaca 48524346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 15835048 - 15835183
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||| ||||||||||||||||  |||||||||    
T  15835048 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaa 15835147  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||   ||||||||||||||||||||||||    
T  15835148 acaatcctttgcaatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 270
Target Start/End: Complemental strand, 46328231 - 46328035
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    ||||| || |||| ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||||||| |||||    
T  46328231 aatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaaatt 46328132  T
Q  175 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |||| ||||||| ||||||||||    
T  46328131 tgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 28387388 - 28387523
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||| ||||||||||||||  ||  ||||||  |||| ||||||||||||||||||||||||||  |||||||||    
T  28387388 aaaaacaatctcaagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaa 28387487  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||| |||||||||||| ||||||||||||    
T  28387488 acaatccttcgaaatttgaatgaatttgaataccac 28387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 51086014 - 51085860
Alignment:
Q  44 taaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaa 143  Q
    ||||||||||||||||||||||||||||   |||||||| ||||||| ||| |     ||||   |||||||||| ||||||| ||||||||| ||||||    
T  51086014 taaaatcttaaaagaaaaaacaatcctagaaaatctcat-ttttcatcaaaaaaaaaatcatattaaaatttcacaagaaaattccacaaaattcatcaa 51085916  T
Q  144 aatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||  ||||||| || |||||||| |||||||||| |||||||||||||| ||||    
T  51085915 aatccaatttatttaataatccttcaaaatttgaattattttgaataccacgagac 51085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  132 aaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 29219481 - 29219351
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||| |||||||| ||  |||||| ||||          ||||||||||||||||||  |||||||||    
T  29219481 aaaaacaatctcaagaaatctcatcttttcatgaaatactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttattaa 29219392  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  29219391 acaatccttcttaatttgaatgattttgaataccacaagac 29219351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 38536094 - 38536224
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  38536094 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 38536183  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  |||||||||| |||||||||||||| ||||    
T  38536184 acaatcctttgaaatttgaataattttgaataccacaagac 38536224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 38558312 - 38558442
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| |||||          |||||||||||||||||  |||||||||    
T  38558312 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaa 38558401  T
Q  159 acaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||||  |||||||||| |||||||||||||| ||||    
T  38558402 acaatcctttgaaatttgaataattttgaataccacaagac 38558442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 48668780 - 48668905
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||| ||  |||||||| |||||||||||||||||||| ||  |||||| ||||| | ||||||||||||||||          |||||||||    
T  48668780 aaaaacaatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaa 48668869  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||| ||| |||||||||| ||||||||||||||    
T  48668870 acaatctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 48524865 - 48524805
Alignment:
Q  42 agtaaaatcttaaaagaaaaaac-aatcctaaggaatctcatgttttcatgaaagactttt 101  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  48524865 agtaaaatcttaaaagaaaaaaccaatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 18798614 - 18798556
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagac 18798556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 270
Target Start/End: Complemental strand, 49231000 - 49230879
Alignment:
Q  150 atttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnna 248  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||       |    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaa 49230901  T
Q  249 aataacaaagaatcttgattga 270  Q
    ||| ||||||| ||||||||||    
T  49230900 aatgacaaagagtcttgattga 49230879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 240
Target Start/End: Original strand, 5495117 - 5495273
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||||||| ||||||| || ||||||||| ||  |||||| ||||| ||||||||||||||||||          |||||||||| |||||||  |||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaataatcctttgaaatt 5495206  T
Q  175 tgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    | |||||||||||||||||| ||||       ||||||| || |||| |||||||||||| ||||||    
T  5495207 taaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagac 5495273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 22183457 - 22183363
Alignment:
Q  177 aatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagacnnnnnnnaaataacaaagaatcttgattga 270  Q
    |||||||||||||||||||||||       |||||||||||| || |||||||||||||||||||       |||| ||||||||||||||||||    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattga 22183363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 730357 - 730307
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaatcctaaggaatctcatgttttcatg 91  Q
    ||||||||||||||||| ||||| || |||||| |||||||||||||||||    
T  730357 tagtaaaatcttaaaaggaaaaaaaaacctaagaaatctcatgttttcatg 730307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  141 caaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
    ||||||| |||||||||||||||| ||  ||||||||||||||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 38320091 - 38319996
Alignment:
Q  79 tcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatccc-acaaaatccatcaaaatctgatttattaaacaatccttccaaatt 174  Q
    |||| |||||||||||||||||||  ||| |||| ||||||| |||| ||| |||||||| |||||||||  ||||| ||||||||| ||| |||||    
T  38320091 tcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatcattcaaaatt 38319996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 199
Target Start/End: Complemental strand, 47784542 - 47784451
Alignment:
Q  98 tttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactag 197  Q
    |||||||||| ||||||| ||||||||||| |||||||||||          ||||||||||||||| ||  || ||||||| |||||||||||||| ||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatcca----------atttattaaacaatctttagaagtttgaataattttgaataccacaag 47784453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 18798660 - 18798607
Alignment:
Q  75 aatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcc 128  Q
    |||||||| |||||||||||||||||||| ||  |||||| ||||| |||||||    
T  18798660 aatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 18798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 38581 - 38781
Alignment:
Q  41 tagtaaaatcttaaaagaaaa-aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38581 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 38680  T
Q  140 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaag 238  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||    
T  38681 tcaaaatctga-ttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 38779  T
Q  239 ac 240  Q
    ||    
T  38780 ac 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 102324 - 102125
Alignment:
Q  43 gtaaaatcttaaaagaaaaaa-caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatc 141  Q
    |||||||||||||| |||||| ||||| |||| |||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  102324 gtaaaatcttaaaataaaaaaacaatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 102225  T
Q  142 aaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccacaagac 240  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||    
T  102224 aaaatctgatttattaaacaatctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 102125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 100444 - 100211
Alignment:
Q  41 tagtaaaatcttaaaagaaaaaacaa---tcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatc 137  Q
    ||||| ||||||||||||||||| ||   ||||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||    
T  100444 tagtacaatcttaaaagaaaaaaaaacagtcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatc 100345  T
Q  138 catcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagagtc-tgattgaataccaca 236  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||       ||||||||||||||| ||||||| |||||||    
T  100344 catcaaaatttgatttattaaacaatcctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccaca 100245  T
Q  237 agacnnnnnnnaaataacaaagaatcttgattga 270  Q
    ||||       |||| ||||||||||||||||||    
T  100244 agactttttttaaatgacaaagaatcttgattga 100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 53 - 270
Target Start/End: Original strand, 528 - 746
Alignment:
Q  53 aaaagaaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 152  Q
    |||| |||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  528 aaaaaaaaaaaaaatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatt 627  T
Q  153 tattaaacaatccttccaaatttgaatgattttgaataccactagacnnnnnnnaagtgattaagag-tctgattgaataccacaagacnnnnnnnaaat 251  Q
    |||||||||||||||||||||||||||||||||||||||||||| |        ||||||||||||| | |||||||||||||||| ||       ||||    
T  628 tattaaacaatccttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaat 727  T
Q  252 aacaaagaatcttgattga 270  Q
     ||||||||||||||||||    
T  728 gacaaagaatcttgattga 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 10772 - 10637
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||| |||||||||||||||   |||||||||    
T  10772 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaa 10673  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||||||  |||||||||||||||||||||||||    
T  10672 acaatcctttgaaatttgaatgattttgaataccac 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 39612 - 39747
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| ||||| || |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||    
T  39612 aaaaacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaa 39711  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    | |||||||| || ||||||||||||||||||||||    
T  39712 ataatccttcgaagtttgaatgattttgaataccac 39747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 1076 - 936
Alignment:
Q  58 aaaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 157  Q
    |||||||||||  ||| |||||||| |||| |||||||||||||||  |  |||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  1076 aaaaaacaatctcaagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttatta 978  T
Q  158 aacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    || ||| |||| ||||||||||||||||||||||||| ||||    
T  977 aataattcttcgaaatttgaatgattttgaataccacaagac 936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 194
Target Start/End: Original strand, 58071 - 58206
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 158  Q
    ||||||||||  ||| |||||||| ||||||||||||| ||| || ||  ||||||  |||| ||||||||||||||||||||||||||  |||||||||    
T  58071 aaaaacaatctcaagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaa 58170  T
Q  159 acaatccttccaaatttgaatgattttgaataccac 194  Q
    |||||| ||| |||||||||||||||||||||||||    
T  58171 acaatcattcgaaatttgaatgattttgaataccac 58206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 36905 - 37035
Alignment:
Q  62 aacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaaca 161  Q
    |||||||  ||| ||||| || |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  36905 aacaatctcaagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaaca 37004  T
Q  162 atccttccaaatttgaatgattttgaatacc 192  Q
    || |||| |||||| ||||||||||||||||    
T  37005 atgcttcgaaattttaatgattttgaatacc 37035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 4337 - 4272
Alignment:
Q  134 aatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccacaagac 4272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 14972 - 14892
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatcca 139  Q
    |||||||||| |||| |||||||| |||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||    
T  14972 aaaaacaatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 14023 - 13954
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||| ||||    
T  14023 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagac 13954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 14084 - 14040
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttc 103  Q
    ||||||||||  ||| |||||||| ||||||||||||||||||||    
T  14084 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttc 14040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 21304 - 21373
Alignment:
Q  130 acaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaataccactagac 199  Q
    ||||||||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||| ||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccacaagac 21373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 21243 - 21287
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttc 103  Q
    ||||||||||  ||| |||||||| ||||||||||||||||||||    
T  21243 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttc 21287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 28554 - 28510
Alignment:
Q  59 aaaaacaatcctaaggaatctcatgttttcatgaaagactttttc 103  Q
    ||||||||||  ||| |||||||| ||||||||||||||||||||    
T  28554 aaaaacaatctcaagaaatctcatcttttcatgaaagactttttc 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 3712 - 3792
Alignment:
Q  84 ttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 164  Q
    |||| ||||||||| ||||| ||  |||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 3792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 199983 - 199905
Alignment:
Q  113 tttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatac 191  Q
    |||||||| |||||| ||||||||| ||||||||   |||||||||||| || ||| |||||||||||||||| |||||    
T  199983 tttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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