View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11497_high_12 (Length: 255)
Name: NF11497_high_12
Description: NF11497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11497_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 34745564 - 34745791
Alignment:
| Q |
18 |
gttgaagggtcaacctcaatgtctatcttgtagcccataattctccaacacatctcatcatttctcatatggatgtactaacgaaaaatcgaacctctct |
117 |
Q |
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| T |
34745564 |
gttgaagggtcaacctcaatgtctatcttgtagcccataattctccaacacatctcatcatttctcatatggatgtactaacgaaaaatcgaacctctct |
34745663 |
T |
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| Q |
118 |
catatgtttgtttgtaaatttgaattatcaaaacttacattgcatgctagttgctagatgccattgnnnnnnnctttctagatgcacatgtgttagaagt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
34745664 |
catatgtttgtttgtaaatttgaattatcaaaacttacattgcatgctagttgctagatgccattgtttttttctttctagatgcacatgtgttagaagt |
34745763 |
T |
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| Q |
218 |
acattcatgcttataccctttttctctg |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34745764 |
acattcatgcttataccctttttctctg |
34745791 |
T |
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