View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11498_high_12 (Length: 284)

Name: NF11498_high_12
Description: NF11498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11498_high_12
NF11498_high_12
[»] chr2 (43 HSPs)
chr2 (15-264)||(9400885-9401119)
chr2 (104-190)||(33827572-33827659)
chr2 (111-190)||(28668991-28669071)
chr2 (104-190)||(35171911-35171998)
chr2 (104-190)||(44946052-44946139)
chr2 (104-189)||(11941210-11941296)
chr2 (103-189)||(25293268-25293356)
chr2 (123-190)||(18692091-18692158)
chr2 (111-190)||(34516413-34516492)
chr2 (132-189)||(27269344-27269401)
chr2 (111-190)||(15038077-15038157)
chr2 (123-190)||(2140485-2140552)
chr2 (104-190)||(3943851-3943938)
chr2 (104-182)||(36242319-36242398)
chr2 (104-190)||(24196115-24196200)
chr2 (104-189)||(30466830-30466916)
chr2 (123-189)||(44929846-44929912)
chr2 (116-190)||(14486948-14487023)
chr2 (123-190)||(18976454-18976521)
chr2 (123-190)||(19054157-19054224)
chr2 (135-190)||(43374329-43374384)
chr2 (104-189)||(714125-714211)
chr2 (111-189)||(29361667-29361745)
chr2 (104-190)||(41314103-41314189)
chr2 (104-189)||(41329953-41330039)
chr2 (112-189)||(4852649-4852726)
chr2 (104-189)||(13266601-13266686)
chr2 (116-189)||(19174886-19174959)
chr2 (103-182)||(45132397-45132477)
chr2 (104-185)||(5608038-5608120)
chr2 (132-190)||(8192351-8192409)
chr2 (148-190)||(27290730-27290772)
chr2 (132-190)||(39957898-39957956)
chr2 (104-189)||(17324877-17324961)
chr2 (104-170)||(44976172-44976240)
chr2 (104-190)||(5394128-5394215)
chr2 (111-189)||(44610157-44610236)
chr2 (119-189)||(19605846-19605916)
chr2 (104-189)||(36390569-36390654)
chr2 (141-190)||(1501463-1501511)
chr2 (106-190)||(8259010-8259095)
chr2 (104-189)||(13599325-13599410)
chr2 (138-190)||(4567428-4567480)
[»] chr6 (28 HSPs)
chr6 (104-190)||(3222635-3222721)
chr6 (104-190)||(21148510-21148596)
chr6 (104-190)||(15360097-15360184)
chr6 (104-190)||(1345046-1345133)
chr6 (104-190)||(34147457-34147544)
chr6 (104-190)||(34160073-34160160)
chr6 (104-189)||(654146-654232)
chr6 (104-189)||(9690638-9690724)
chr6 (104-190)||(21982320-21982406)
chr6 (104-189)||(5360071-5360157)
chr6 (111-188)||(9239093-9239171)
chr6 (104-189)||(11448982-11449068)
chr6 (111-190)||(14213000-14213080)
chr6 (111-189)||(28672185-28672264)
chr6 (106-190)||(9844051-9844136)
chr6 (112-189)||(11841020-11841097)
chr6 (104-190)||(17081053-17081140)
chr6 (116-189)||(17225790-17225863)
chr6 (112-180)||(33718478-33718547)
chr6 (111-190)||(11007283-11007363)
chr6 (106-189)||(15730495-15730579)
chr6 (104-187)||(10377826-10377911)
chr6 (123-189)||(14504082-14504148)
chr6 (86-190)||(21903618-21903724)
chr6 (151-189)||(4797256-4797294)
chr6 (157-190)||(7491665-7491698)
chr6 (104-190)||(12390536-12390620)
chr6 (125-189)||(33499608-33499672)
[»] chr5 (47 HSPs)
chr5 (104-190)||(19456210-19456296)
chr5 (104-190)||(41351103-41351189)
chr5 (104-190)||(7085625-7085712)
chr5 (104-190)||(8484660-8484747)
chr5 (104-190)||(27498730-27498817)
chr5 (102-190)||(33709502-33709591)
chr5 (112-189)||(22693054-22693132)
chr5 (104-190)||(38684319-38684405)
chr5 (106-190)||(18207320-18207405)
chr5 (104-189)||(11926501-11926588)
chr5 (105-184)||(11464913-11464992)
chr5 (104-190)||(15641105-15641191)
chr5 (106-189)||(28614486-28614569)
chr5 (104-190)||(32059439-32059526)
chr5 (104-190)||(35425124-35425211)
chr5 (108-189)||(13659245-13659327)
chr5 (105-190)||(21236361-21236447)
chr5 (132-190)||(37495194-37495252)
chr5 (104-189)||(19145412-19145497)
chr5 (106-181)||(13108458-13108534)
chr5 (104-190)||(4603888-4603975)
chr5 (104-190)||(10869564-10869651)
chr5 (111-181)||(13038463-13038534)
chr5 (104-190)||(22392799-22392886)
chr5 (123-190)||(30485959-30486026)
chr5 (123-190)||(38630978-38631045)
chr5 (104-189)||(5049248-5049333)
chr5 (132-189)||(27487554-27487611)
chr5 (138-190)||(10631288-10631340)
chr5 (111-189)||(23270522-23270601)
chr5 (108-190)||(31287945-31288028)
chr5 (104-189)||(34310253-34310339)
chr5 (104-190)||(12317154-12317240)
chr5 (104-189)||(6014280-6014366)
chr5 (123-189)||(9659311-9659377)
chr5 (104-189)||(34049922-34050008)
chr5 (132-190)||(42006873-42006931)
chr5 (121-178)||(5067390-5067447)
chr5 (104-189)||(10813851-10813936)
chr5 (132-189)||(41084123-41084180)
chr5 (142-190)||(3599997-3600045)
chr5 (104-190)||(12398447-12398534)
chr5 (143-189)||(7151454-7151500)
chr5 (132-190)||(33737882-33737939)
chr5 (104-160)||(15971151-15971208)
chr5 (156-189)||(25750613-25750646)
chr5 (132-189)||(36895565-36895622)
[»] chr3 (59 HSPs)
chr3 (104-190)||(24165714-24165800)
chr3 (104-189)||(49258262-49258348)
chr3 (104-189)||(52821636-52821721)
chr3 (104-190)||(8097278-8097365)
chr3 (104-190)||(10083818-10083905)
chr3 (104-190)||(46576459-46576546)
chr3 (104-190)||(15566499-15566585)
chr3 (104-189)||(24407372-24407458)
chr3 (104-190)||(10190741-10190828)
chr3 (104-190)||(40133448-40133535)
chr3 (104-190)||(45272415-45272502)
chr3 (111-190)||(53424176-53424255)
chr3 (111-189)||(54475799-54475878)
chr3 (104-190)||(8456149-8456236)
chr3 (123-190)||(26174244-26174311)
chr3 (104-190)||(48977499-48977586)
chr3 (123-190)||(53848433-53848500)
chr3 (104-190)||(1178283-1178368)
chr3 (111-189)||(4462751-4462829)
chr3 (104-189)||(18176887-18176973)
chr3 (104-189)||(32151535-32151621)
chr3 (104-189)||(35493022-35493108)
chr3 (104-189)||(39041852-39041938)
chr3 (104-188)||(25379872-25379957)
chr3 (104-188)||(48104988-48105073)
chr3 (104-190)||(2511296-2511383)
chr3 (104-190)||(25289714-25289800)
chr3 (104-190)||(30257735-30257822)
chr3 (104-190)||(45529754-45529840)
chr3 (104-190)||(52455648-52455735)
chr3 (104-190)||(53233910-53233996)
chr3 (104-189)||(21363054-21363140)
chr3 (103-189)||(50731237-50731323)
chr3 (103-189)||(50781531-50781617)
chr3 (136-189)||(4048094-4048147)
chr3 (104-190)||(30807152-30807239)
chr3 (104-189)||(6041670-6041757)
chr3 (111-189)||(33398468-33398547)
chr3 (104-190)||(33698705-33698792)
chr3 (103-181)||(55371302-55371381)
chr3 (104-189)||(34492575-34492661)
chr3 (141-190)||(3747730-3747779)
chr3 (123-184)||(26158942-26159003)
chr3 (121-189)||(25017618-25017685)
chr3 (106-189)||(7485531-7485613)
chr3 (123-190)||(8958034-8958101)
chr3 (104-190)||(40940936-40941023)
chr3 (123-181)||(4252404-4252462)
chr3 (104-189)||(1692945-1693030)
chr3 (105-189)||(31537838-31537923)
chr3 (103-190)||(7195917-7196005)
chr3 (111-171)||(29915288-29915348)
chr3 (111-171)||(29964441-29964501)
chr3 (128-184)||(32414581-32414637)
chr3 (104-158)||(1242085-1242139)
chr3 (148-190)||(11390758-11390800)
chr3 (104-174)||(14343304-14343374)
chr3 (111-189)||(53288713-53288791)
chr3 (136-190)||(55287929-55287983)
[»] chr1 (42 HSPs)
chr1 (86-188)||(37351454-37351558)
chr1 (104-189)||(26513148-26513233)
chr1 (104-190)||(4621236-4621323)
chr1 (104-190)||(8254751-8254838)
chr1 (104-189)||(24122134-24122220)
chr1 (104-190)||(7766726-7766813)
chr1 (111-188)||(34778457-34778535)
chr1 (104-190)||(7578520-7578607)
chr1 (104-190)||(15059401-15059488)
chr1 (104-190)||(32729655-32729742)
chr1 (104-189)||(24674504-24674590)
chr1 (104-188)||(17935880-17935965)
chr1 (104-190)||(2272455-2272542)
chr1 (104-190)||(22909982-22910069)
chr1 (104-189)||(7197247-7197333)
chr1 (132-190)||(27454863-27454921)
chr1 (111-190)||(48699877-48699957)
chr1 (111-181)||(8779744-8779815)
chr1 (123-190)||(46607941-46608008)
chr1 (104-189)||(9500355-9500441)
chr1 (111-184)||(21726847-21726921)
chr1 (123-189)||(35138119-35138185)
chr1 (104-185)||(1379009-1379090)
chr1 (104-189)||(40802069-40802154)
chr1 (143-190)||(14603947-14603994)
chr1 (138-189)||(23041668-23041719)
chr1 (139-189)||(5315478-5315528)
chr1 (123-189)||(9926146-9926212)
chr1 (112-190)||(27159205-27159283)
chr1 (105-179)||(43769975-43770049)
chr1 (104-184)||(18646964-18647045)
chr1 (132-189)||(36155888-36155945)
chr1 (111-189)||(45331621-45331701)
chr1 (106-189)||(18533724-18533808)
chr1 (123-190)||(30677307-30677374)
chr1 (111-189)||(45859043-45859122)
chr1 (111-190)||(23734234-23734315)
chr1 (111-190)||(23741426-23741507)
chr1 (128-189)||(809358-809419)
chr1 (106-190)||(33905509-33905594)
chr1 (104-187)||(8077758-8077841)
chr1 (125-181)||(40145889-40145945)
[»] scaffold0576 (1 HSPs)
scaffold0576 (104-190)||(5081-5168)
[»] chr7 (44 HSPs)
chr7 (104-190)||(2751386-2751473)
chr7 (104-189)||(3851872-3851958)
chr7 (111-190)||(21217832-21217912)
chr7 (104-190)||(22120003-22120090)
chr7 (104-190)||(40542909-40542996)
chr7 (104-190)||(654704-654790)
chr7 (104-190)||(21835266-21835353)
chr7 (104-190)||(23092211-23092298)
chr7 (104-190)||(29861785-29861872)
chr7 (104-189)||(7275392-7275478)
chr7 (104-189)||(17196950-17197036)
chr7 (105-190)||(27312268-27312354)
chr7 (104-188)||(22638403-22638488)
chr7 (111-190)||(16374116-16374196)
chr7 (104-190)||(11997964-11998051)
chr7 (104-190)||(42913512-42913599)
chr7 (104-189)||(18044222-18044308)
chr7 (104-190)||(28089935-28090021)
chr7 (104-188)||(19421346-19421431)
chr7 (132-189)||(31712902-31712959)
chr7 (123-190)||(7175861-7175928)
chr7 (104-190)||(10091303-10091389)
chr7 (104-190)||(22703601-22703688)
chr7 (104-190)||(31274029-31274115)
chr7 (111-190)||(31197712-31197792)
chr7 (104-190)||(23012507-23012594)
chr7 (104-189)||(27009474-27009561)
chr7 (112-190)||(43785298-43785377)
chr7 (105-189)||(25333519-25333603)
chr7 (104-188)||(32849706-32849791)
chr7 (116-184)||(1766149-1766217)
chr7 (111-190)||(2344421-2344501)
chr7 (105-188)||(9683942-9684026)
chr7 (123-190)||(21574101-21574168)
chr7 (123-181)||(8943409-8943467)
chr7 (104-189)||(41907514-41907599)
chr7 (104-189)||(39145652-39145737)
chr7 (104-190)||(2103170-2103255)
chr7 (104-190)||(9717986-9718073)
chr7 (123-189)||(27704136-27704202)
chr7 (104-189)||(28950986-28951072)
chr7 (104-189)||(36772303-36772389)
chr7 (137-182)||(17212202-17212247)
chr7 (134-187)||(30345511-30345564)
[»] chr8 (41 HSPs)
chr8 (104-189)||(264400-264485)
chr8 (104-189)||(651436-651521)
chr8 (104-189)||(837171-837256)
chr8 (104-188)||(28193589-28193674)
chr8 (104-190)||(2639410-2639497)
chr8 (104-190)||(3734622-3734709)
chr8 (104-190)||(4718760-4718847)
chr8 (104-190)||(8765525-8765612)
chr8 (104-190)||(32879394-32879481)
chr8 (104-190)||(39349371-39349458)
chr8 (104-189)||(21603345-21603431)
chr8 (104-190)||(34237654-34237741)
chr8 (104-189)||(10292169-10292255)
chr8 (125-190)||(14633091-14633156)
chr8 (104-190)||(2618301-2618388)
chr8 (104-190)||(42328119-42328206)
chr8 (119-189)||(42643118-42643188)
chr8 (104-190)||(20306023-20306110)
chr8 (104-190)||(21092656-21092743)
chr8 (104-190)||(19471724-19471812)
chr8 (104-190)||(19542648-19542736)
chr8 (104-190)||(19589960-19590048)
chr8 (104-189)||(25248463-25248547)
chr8 (104-180)||(28088401-28088478)
chr8 (104-190)||(4698722-4698809)
chr8 (111-189)||(12312968-12313046)
chr8 (104-189)||(18128628-18128714)
chr8 (104-188)||(15259407-15259492)
chr8 (104-190)||(34610686-34610773)
chr8 (104-189)||(6953008-6953093)
chr8 (106-188)||(7557952-7558034)
chr8 (132-190)||(16990727-16990785)
chr8 (153-190)||(18532263-18532300)
chr8 (104-190)||(27746334-27746421)
chr8 (123-189)||(2166831-2166897)
chr8 (155-189)||(9713621-9713655)
chr8 (123-189)||(20470052-20470117)
chr8 (106-190)||(1219466-1219551)
chr8 (106-190)||(28964150-28964234)
chr8 (136-188)||(8387460-8387512)
chr8 (158-190)||(10544924-10544956)
[»] chr4 (49 HSPs)
chr4 (104-190)||(19660531-19660618)
chr4 (104-190)||(34844757-34844844)
chr4 (104-190)||(40058851-40058938)
chr4 (104-188)||(52983730-52983815)
chr4 (104-190)||(5609201-5609288)
chr4 (104-190)||(32986308-32986395)
chr4 (104-190)||(44343625-44343712)
chr4 (104-190)||(27528794-27528881)
chr4 (104-190)||(18875516-18875602)
chr4 (104-189)||(34723910-34723996)
chr4 (104-190)||(55961753-55961839)
chr4 (104-189)||(35229278-35229365)
chr4 (111-190)||(46714511-46714591)
chr4 (104-190)||(32990546-32990633)
chr4 (104-190)||(45787703-45787790)
chr4 (104-190)||(54127341-54127428)
chr4 (106-190)||(22488027-22488112)
chr4 (136-189)||(23639768-23639821)
chr4 (136-189)||(23645426-23645479)
chr4 (103-189)||(51535730-51535818)
chr4 (132-189)||(52494628-52494685)
chr4 (104-187)||(20077986-20078070)
chr4 (123-189)||(4064991-4065057)
chr4 (123-189)||(9978509-9978575)
chr4 (104-189)||(20566461-20566547)
chr4 (104-189)||(51595133-51595219)
chr4 (104-180)||(9517650-9517727)
chr4 (105-188)||(13550320-13550404)
chr4 (126-190)||(23131435-23131499)
chr4 (104-190)||(4912037-4912124)
chr4 (108-190)||(36131509-36131592)
chr4 (132-190)||(7391964-7392022)
chr4 (104-189)||(33696279-33696365)
chr4 (132-190)||(43719086-43719144)
chr4 (111-189)||(49287976-49288054)
chr4 (124-189)||(37302619-37302684)
chr4 (104-190)||(21387486-21387571)
chr4 (104-190)||(13584253-13584340)
chr4 (104-190)||(27574429-27574516)
chr4 (104-190)||(53787056-53787143)
chr4 (139-189)||(25852362-25852412)
chr4 (127-189)||(33289189-33289251)
chr4 (103-188)||(41621583-41621669)
chr4 (132-189)||(17637852-17637908)
chr4 (106-190)||(6427102-6427185)
chr4 (132-188)||(9646217-9646273)
chr4 (112-188)||(20527035-20527111)
chr4 (157-189)||(24672305-24672337)
chr4 (104-188)||(25969504-25969587)
[»] scaffold0217 (1 HSPs)
scaffold0217 (105-189)||(7309-7394)
[»] scaffold0102 (1 HSPs)
scaffold0102 (106-190)||(39205-39290)
[»] scaffold0328 (1 HSPs)
scaffold0328 (110-189)||(13047-13127)
[»] scaffold0070 (1 HSPs)
scaffold0070 (104-190)||(40436-40522)
[»] scaffold0049 (1 HSPs)
scaffold0049 (104-189)||(66865-66951)
[»] scaffold0019 (1 HSPs)
scaffold0019 (123-190)||(161940-162007)
[»] scaffold0459 (1 HSPs)
scaffold0459 (104-190)||(10694-10779)
[»] scaffold0051 (1 HSPs)
scaffold0051 (104-190)||(52870-52957)
[»] scaffold1175 (1 HSPs)
scaffold1175 (104-189)||(2426-2512)
[»] scaffold0199 (1 HSPs)
scaffold0199 (132-189)||(8451-8508)
[»] scaffold0366 (2 HSPs)
scaffold0366 (104-190)||(9299-9385)
scaffold0366 (104-190)||(12000-12086)
[»] scaffold0068 (1 HSPs)
scaffold0068 (104-190)||(41644-41730)
[»] scaffold0016 (1 HSPs)
scaffold0016 (123-190)||(32419-32485)
[»] scaffold0623 (1 HSPs)
scaffold0623 (104-189)||(1057-1142)
[»] scaffold0026 (1 HSPs)
scaffold0026 (104-189)||(97366-97452)
[»] scaffold0020 (1 HSPs)
scaffold0020 (120-189)||(123066-123134)


Alignment Details
Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 264
Target Start/End: Complemental strand, 9401119 - 9400885
Alignment:
Q  15 taattgaaattgaccggcatcaggggaaccagtcatgtacgtaactcatggagtcaatacttgacagtgatatacagagcttgctctgagctctgacttt 114  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||                 ||||||| ||||    
T  9401119 taattgaaattgaccagcatcagaggaacaagtcatgtacgtaactcatggagtcaatacttgacagtgat-----------------agctctggcttt 9401037  T
Q  115 aaac-ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt-cnnnnnnnnnnnnnnntacttga 212  Q
    |||| ||| |||| ||| ||||| ||||||||| |  |||| ||||||| |||||||||||||||||| |||||||                 |||||||    
T  9401036 aaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagttttaaaaaaaaaaaaaaaaatacttga 9400937  T
Q  213 cagtgaaaaatgagtcctcgttgttgaatgtgaatgatttaacttaactatt 264  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9400936 cagtgaaaaatgagtcctcattgttgaatgtgaatgatttaacttaactatt 9400885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 33827659 - 33827572
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  33827659 gctctggctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 28668991 - 28669071
Alignment:
Q  111 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  28668991 ctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 35171911 - 35171998
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  35171911 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 44946139 - 44946052
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  44946139 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 11941296 - 11941210
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  11941296 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 25293268 - 25293356
Alignment:
Q  103 agctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| |||||||||||||||| |  || |||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  25293268 agctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 18692091 - 18692158
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 34516492 - 34516413
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||| |||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||    
T  34516492 ctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 27269401 - 27269344
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  27269401 tgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 15038077 - 15038157
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||| |||||  ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  15038077 ctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 2140552 - 2140485
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  2140552 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 3943851 - 3943938
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||| | || |||||||||||||| |||||||    
T  3943851 gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 182
Target Start/End: Complemental strand, 36242398 - 36242319
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatacc 182  Q
    |||||| |||||||||||| |||| ||| ||||||||||||||| |||||| |||||| | |||||||||||||||||||    
T  36242398 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 24196115 - 24196200
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||| || ||| |||||||||||||||    
T  24196115 gctctggctttaaacggg-ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 30466916 - 30466830
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||| |||||||  ||| ||||| ||||||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  30466916 gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 44929912 - 44929846
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  44929912 ccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 14486948 - 14487023
Alignment:
Q  116 aacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 18976521 - 18976454
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||| |||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 19054157 - 19054224
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| ||| || |||||||| |||||||||||| ||||||||||||||    
T  19054157 ccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 43374384 - 43374329
Alignment:
Q  135 gcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  43374384 gcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 714211 - 714125
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||  ||||||  ||||||| ||||||| ||| ||||||||||||||    
T  714211 gctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 29361667 - 29361745
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||| |||||| | ||||| ||||||||||| ||||||||    
T  29361667 ctttaaacggagccccgcaagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagtttt 29361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 41314103 - 41314189
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||  ||| ||| ||| ||||||||||| ||||||  ||||| | ||||||| ||||||||||| |||||||    
T  41314103 gctctgactttaaacgggatcccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 41329953 - 41330039
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||| |||||||| |||| ||||||||| ||||| ||||||  ||||||| | |||||||| |||||||||||||||    
T  41329953 gctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  112 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| ||| ||| |||||| |||| |||||| |||||| | |||||||||||||||| || ||||||    
T  4852649 tttaaacggggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 13266601 - 13266686
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||||||| ||| ||||   |||||||| ||||||   |||||| ||||||||||||||||| ||||||||    
T  13266601 gctctggctttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 19174886 - 19174959
Alignment:
Q  116 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||| | | | ||||||||||||||||| ||||    
T  19174886 aacggagccccgtaaatgggcggtgggattgatcccctcggattaatcggtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 45132397 - 45132477
Alignment:
Q  103 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggatacc 182  Q
    ||||||| |||||||||||||||| |||| ||||| || |||||| ||| || |||||| | |||||||||||||||||||    
T  45132397 agctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 5608120 - 5608038
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgag 185  Q
    ||||||||||||||||| || ||||||||||| ||| |||||||||||| |  ||| ||| |||| ||| |||||||||||||    
T  5608120 gctctgactttaaacggagctcccacaaatggtcggcgggattgatcccttcagatgagtcgattattgaatcggataccgag 5608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 8192409 - 8192351
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||  ||||| |||||||| | | |||||||||||||||||||||||    
T  8192409 tgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 27290730 - 27290772
Alignment:
Q  148 tccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  27290730 tcccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 39957898 - 39957956
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| | |||| |||||||| ||||||||||| |||||||||||||||    
T  39957898 tgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 17324877 - 17324961
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||| ||| |||||||| ||||||||||||||  ||||||   |||||| ||||||| ||||||||| ||||||||    
T  17324877 gctctggctttaaatgggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 44976240 - 44976172
Alignment:
Q  104 gctctgactttaaacggggc--cccacaaatgggcggtgggattgatccccttggattagtagattctt 170  Q
    |||||| |||||||||||||  ||| ||| |||||||||||||||||||| | |||||||| |||||||    
T  44976240 gctctggctttaaacggggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 5394128 - 5394215
Alignment:
Q  104 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||| |||||| || ||| ||||||||||||||| |||  | |||||||| | | ||| ||||||||||||| |||||    
T  5394128 gctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaattttc 5394215  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 44610157 - 44610236
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| ||||||||  ||| ||||||||||||||| |||| | |||||||| | |||||||| || ||||||||||||    
T  44610157 ctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 19605916 - 19605846
Alignment:
Q  119 ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||||||| ||||||||| ||||| |||||| | |||||| ||  ||||||||||||| ||||||||    
T  19605916 gggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 36390654 - 36390569
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||| ||| ||||  ||| ||||||||||||||| |||| | |||| ||| ||| |||| |||||||||||||||||    
T  36390654 gctctgactttaaatgggacccccgcaagtgggcggtgggattggtccc-tcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  141 ggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  1501511 ggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 1501463  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 8259010 - 8259095
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| |||||| |||||||||  ||| | ||||||||||||  | || | |||||||| |||||||||||||||||| ||||||||    
T  8259010 tctggctttaatcggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttc 8259095  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 13599410 - 13599325
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||  ||||||||||| ||| ||| ||||| ||||||||||||   |||||| | |  |||||||||||||||| ||||    
T  13599410 gctctgacttagaacggggccccgcaagtggacggtgagattgatcccctcatattagtgggtcattggatcggataccgaatttt 13599325  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 4567480 - 4567428
Alignment:
Q  138 gtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||| ||| || ||||||||  |||||||||||||||||| |||||||    
T  4567480 gtgggattggtcctctcggattagtcaattcttggatcggatacccagttttc 4567428  T

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Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 3222721 - 3222635
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3222721 gctctgtctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 21148596 - 21148510
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  21148596 gctctgactttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

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Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 15360184 - 15360097
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  15360184 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 15360097  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 1345046 - 1345133
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1345046 gctctggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 34147457 - 34147544
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34147457 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

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Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 34160073 - 34160160
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34160073 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

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Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 654232 - 654146
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||    
T  654232 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

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Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 9690724 - 9690638
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||| ||||| ||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  9690724 gctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

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Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 21982406 - 21982320
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  21982406 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 21982320  T

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Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 5360157 - 5360071
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||  |||| |||| ||||||||||||||| |||||| | |||||| ||||||| ||||||||||||||||||    
T  5360157 gctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

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Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 9239093 - 9239171
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||||| ||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  9239093 ctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

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Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 11448982 - 11449068
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  11448982 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

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Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 14213000 - 14213080
Alignment:
Q  111 ctttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||| |||| ||| |||| |||||||||| ||| || |||||||| |||||||||||||||||||||||||||    
T  14213000 ctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 28672185 - 28672264
Alignment:
Q  111 ctttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| ||| | ||| ||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||    
T  28672185 ctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

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Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 9844051 - 9844136
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||||||||||||||||  ||| ||||||||| ||||| |||| | |||||||| ||||||||||||||||| |||||||||    
T  9844051 tctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

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Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 11841020 - 11841097
Alignment:
Q  112 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||| || ||| ||||||||||  |||||| | |||||| |||| |||||||||||||||||||||    
T  11841020 tttaaacggggccccataagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 17081140 - 17081053
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| |||||| | || ||| | ||||||||||| |||||||||||||    
T  17081140 gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttttc 17081053  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 17225790 - 17225863
Alignment:
Q  116 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||| | | ||| ||||||||| ||||||||    
T  17225790 aacggggccccgcaaatgggcggtgggattgatctcctcagattagtcggtccttagatcggatatcgagtttt 17225863  T

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Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 33718547 - 33718478
Alignment:
Q  112 tttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggata 180  Q
    ||||||||||||| |  ||| ||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  33718547 tttaaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 11007283 - 11007363
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||  ||| |||||||||||||||  ||||| |||||||| ||||||| ||||||||||| |||||||    
T  11007283 ctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttc 11007363  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 15730579 - 15730495
Alignment:
Q  106 tctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||||||||| |||||| |||  ||||||||||||||| || ||| |||||||| ||||||| ||||||||| ||||||||    
T  15730579 tctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 10377826 - 10377911
Alignment:
Q  104 gctctgactttaaacggggcccc--acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 187  Q
    |||||||||| ||||||||||||  |||| |||||||||| |||| |||||| ||| |||| | | ||||||| ||||||||||||    
T  10377826 gctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 14504148 - 14504082
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||||||||||||||||| || | |||||| ||| |||| |||||||||||||||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 21903724 - 21903618
Alignment:
Q  86 atacagagctt-gctctgagctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttg-gattagtagattcttggatcggatacc 182  Q
    ||||||||||| |||||| |||||| ||||||| ||||| ||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||| |     
T  21903724 atacagagctttgctctg-gctctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgca 21903626  T
Q  183 gagttttc 190  Q
    ||||||||    
T  21903625 gagttttc 21903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 4797256 - 4797294
Alignment:
Q  151 ccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  4797256 ccttggattagtcgattcttggatcggataacgagtttt 4797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 7491698 - 7491665
Alignment:
Q  157 attagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||||||||||||||    
T  7491698 attagtcgattcttggatcggataccgagttttc 7491665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 12390536 - 12390620
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| |||||||| ||   ||  ||||||||||||||||||    
T  12390536 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcga---ttaaatcggataccgagttttc 12390620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 33499608 - 33499672
Alignment:
Q  125 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||| |||||| ||||||||   ||  |||| |||||||||||||||    
T  33499608 ccacaagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagtttt 33499672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 19456296 - 19456210
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  19456296 gctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 19456210  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 41351189 - 41351103
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||| || ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  41351189 gctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 7085712 - 7085625
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  7085712 gctctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 8484747 - 8484660
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8484747 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 27498817 - 27498730
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  27498817 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 33709591 - 33709502
Alignment:
Q  102 gagctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||| ||||||||||| |||| |||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  33709591 gagctctggctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  112 tttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

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Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 38684319 - 38684405
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| |||| ||| || |||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  38684319 gctctggctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 18207320 - 18207405
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||||||||| ||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  18207320 tctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 11926588 - 11926501
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||||||| |  || |||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  11926588 gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 11464992 - 11464913
Alignment:
Q  105 ctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    ||||| |||||||||||||||| ||| |||| |||||||||| |||||| | |||||| |||||||||||||||||||||    
T  11464992 ctctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 15641191 - 15641105
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  15641191 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 28614569 - 28614486
Alignment:
Q  106 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||  ||| || |||| |||||||||||||||||| | |||||| |||| |||||||||||||||||||||    
T  28614569 tctgactttaaacgggatcccgcagatggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 32059526 - 32059439
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  32059526 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 35425124 - 35425211
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| ||| || |||||||| ||||||||||||||||||||| |||||    
T  35425124 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 13659327 - 13659245
Alignment:
Q  108 tgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||| ||||  ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  13659327 tgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttt 13659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 21236447 - 21236361
Alignment:
Q  105 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||||||  ||| ||||||||||||||  ||||||  ||||||| |||||||| ||||||||||||||||||    
T  21236447 ctctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 37495194 - 37495252
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  37495194 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 19145497 - 19145412
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||| ||  |||| ||| ||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||    
T  19145497 gctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 13108534 - 13108458
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    |||| ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  13108534 tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 4603888 - 4603975
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  4603888 gctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 10869651 - 10869564
Alignment:
Q  104 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||||| || ||| ||||||||||||||| |||||| |||||||| | ||||||||||||||||| |||||||    
T  10869651 gctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 13038534 - 13038463
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  13038534 ctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 22392799 - 22392886
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||||||| |||| ||||||  ||||||| |||| ||||||||||||||||||||||    
T  22392799 gctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 30485959 - 30486026
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||    
T  30485959 ccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 38631045 - 38630978
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  38631045 ccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 5049248 - 5049333
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||| ||||||| ||||||||||| |||| | | |||||| ||||||||||||| ||||| ||||||    
T  5049248 gctctggctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 27487611 - 27487554
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  27487611 tgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  138 gtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 23270601 - 23270522
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||| |||||  ||||||| ||||||||||| |||||| |||||||| ||||||||||| ||||||| ||||||    
T  23270601 ctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 31288028 - 31287945
Alignment:
Q  108 tgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||||  ||| ||||||||||||||| || ||| | |||||| | |||||||| ||||||||||||||||    
T  31288028 tgactttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 34310253 - 34310339
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||| | || ||| ||||||||||| |||||| | |||| | ||||||||||||||||||||||||||    
T  34310253 gctctggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 12317240 - 12317154
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||| |||| ||||  ||| |||| ||||||||||||||| | ||||||||  |||||| |||||||||||||||||||    
T  12317240 gctctgactttaagcgggccccccgcaagtgggtggtgggattgatccc-tcggattagtcaattcttagatcggataccgagttttc 12317154  T

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Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 6014366 - 6014280
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||| || | ||| ||||||||| ||||  |||||| | |||||| ||||||||||||||||| ||||||||    
T  6014366 gctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 9659377 - 9659311
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||| ||||||||||| |||| | |||||||| ||||||||||| ||||||||||||||    
T  9659377 ccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 34049922 - 34050008
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||| |||| |||||| |||||| |||||||| ||||||   |||||||||||||||||    
T  34049922 gctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 42006873 - 42006931
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||| |||| ||| ||||||||||| ||||||| ||||||||||||| |||||    
T  42006873 tgggcggtggaattgttccacttggattagttgattctttgatcggataccgaattttc 42006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  121 ggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcgga 178  Q
    |||||| ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 10813936 - 10813851
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||| ||||||||||| | || |||||||||  |||||||||||||||   |||||| | || ||||||||||||    
T  10813936 gctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggattagtcagttcttgaaccgaataccgagtttt 10813851  T

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Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 41084123 - 41084180
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| ||||||||||| | |||||||| | |||||| |||||||||||||||||    
T  41084123 tgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 3600045 - 3599997
Alignment:
Q  142 gattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| ||||    
T  3600045 gattgatcccctcggattagtcgattcttggatctgataccgagatttc 3599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 12398534 - 12398447
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||||||| ||||| ||||||||| ||   |||||| | ||||||||| |||||||||||||||    
T  12398534 gctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 7151454 - 7151500
Alignment:
Q  143 attgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||||    
T  7151454 attggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 33737882 - 33737939
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||| ||||| |||||| || ||||| |||||||| ||||||||||||||||||    
T  33737882 tgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagttttc 33737939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 15971208 - 15971151
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggatta 160  Q
    |||||||||||||||||| ||||  ||| ||||||||| |||||||||||| ||||||    
T  15971208 gctctgactttaaacgggacccccgcaagtgggcggtgagattgatcccctcggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 25750646 - 25750613
Alignment:
Q  156 gattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| ||||||||||||||||||||||||||    
T  25750646 gattagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 36895565 - 36895622
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| ||||||| || ||| | |||||| | ||||||||||||||||||||||||    
T  36895565 tgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

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Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 24165800 - 24165714
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  24165800 gctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 49258348 - 49258262
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  49258348 gctctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 52821721 - 52821636
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  || ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  52821721 gctctggctttaaacggggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 8097365 - 8097278
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8097365 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 10083905 - 10083818
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |||| ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10083905 gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 46576459 - 46576546
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  46576459 gctctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 15566585 - 15566499
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  15566585 gctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 24407372 - 24407458
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||||||  | ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  24407372 gctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 10190828 - 10190741
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10190828 gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 40133535 - 40133448
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  40133535 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 45272502 - 45272415
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||    
T  45272502 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 53424255 - 53424176
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||| |||| ||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  53424255 ctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 54475799 - 54475878
Alignment:
Q  111 ctttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  54475799 ctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 8456236 - 8456149
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||| ||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  8456236 gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 26174244 - 26174311
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  26174244 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 48977499 - 48977586
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  48977499 gctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 53848500 - 53848433
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  53848500 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 1178283 - 1178368
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||||||||||  ||||||||||||||| |||| | |||||||| || ||||||||||||||||||||||||    
T  1178283 gctctggctttaaatggggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 1178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 4462751 - 4462829
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||| ||| ||| ||||||||||||||| || ||||||||  |||||||||| ||||||||||||||    
T  4462751 ctttaaacggggccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 18176973 - 18176887
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||| |||||||    
T  18176973 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 32151535 - 32151621
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  32151535 gctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

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Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 35493022 - 35493108
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||| | ||||||||||||    
T  35493022 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

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Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 39041938 - 39041852
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| |||| |||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  39041938 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 25379872 - 25379957
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||||||||||||  |||  |||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||    
T  25379872 gctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 25379957  T

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Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 48104988 - 48105073
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| |||||||| ||||||| |||| ||||||||| ||||| |||| | |||||||| |||||||||||||||||||||||||    
T  48104988 gctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

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Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 2511383 - 2511296
Alignment:
Q  104 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||| || || ||| ||||||||||||||| || ||| | ||||||||||||||| |||||||||| |||||||    
T  2511383 gctctgactttaaacgggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

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Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 25289800 - 25289714
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | | |||||| |||||||||||||||||||||||||||    
T  25289800 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcgaattagtcgattcttggatcggataccgagttttc 25289714  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 30257735 - 30257822
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||| |||||||||| |||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  30257735 gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattttc 30257822  T

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Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 45529840 - 45529754
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  45529840 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

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Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 52455735 - 52455648
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||||||||  ||| ||   |||||||||| |||||| |||||||| ||||||||||| |||||||||||||||    
T  52455735 gctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 52455648  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 53233996 - 53233910
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| || |||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  53233996 gctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 21363054 - 21363140
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||| |||||  ||| ||||||||||||||| | |||| |||||| | ||||||||||||||||||||||||||    
T  21363054 gctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

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Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 50731323 - 50731237
Alignment:
Q  103 agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||  || ||| || ||||| ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||||||    
T  50731323 agctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 50781531 - 50781617
Alignment:
Q  103 agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||  || ||| || ||||| ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||||||    
T  50781531 agctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 4048094 - 4048147
Alignment:
Q  136 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  4048094 cggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 30807239 - 30807152
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |  || |||||||| |||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  30807239 gctctggctttaaacggggccccccgcaagtgggcggtaggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 6041757 - 6041670
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||  ||||| |  |||||||||||| ||||| ||||||| ||||||| | |||||||||| |||||||||||||    
T  6041757 gctctgactttaaacgaagcccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 33398547 - 33398468
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||  ||| ||||||||||||||| | |||| | |||||| ||||||||||||||||||||| ||||    
T  33398547 ctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 33698792 - 33698705
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||| ||| |||||||| |||||||||| ||||||   |||||| |||||| ||||||||| ||||||||||    
T  33698792 gctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttc 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 55371381 - 55371302
Alignment:
Q  103 agctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    ||||||| ||| ||||||||||| | ||| ||||||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  55371381 agctctggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 34492661 - 34492575
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||  |  ||||||| |||||||||||| |||||||||||||    
T  34492661 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  141 ggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 26158942 - 26159003
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    |||| ||| |||||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  26158942 ccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 25017618 - 25017685
Alignment:
Q  121 ggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||| ||||||||||||||| | || |||||||||| ||||||||||||| ||||||||||||    
T  25017618 ggccccgcaagtgggcggtgggattggttcc-ttggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 7485613 - 7485531
Alignment:
Q  106 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| |||||||| || |||  ||| ||| ||||||||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  7485613 tctggctttaaacaggcccctgcaagtggccggtgggattggtccc-tcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 8958101 - 8958034
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| ||||||  ||||| | |||||||||||| ||||||||||||||    
T  8958101 ccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttttc 8958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 40940936 - 40941023
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||||||| |||| |||| ||| |||||| |||||| | |||| |  ||||||| ||| ||||||||||||||    
T  40940936 gctctgactttaaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccgagttttc 40941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 4252462 - 4252404
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    |||||||| ||| ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  4252462 ccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 1692945 - 1693030
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||| || || |||| ||| ||||||||||||||   |||||  ||||||| |||||||| |||||||||||||||||    
T  1692945 gctctggctttagacaggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 31537923 - 31537838
Alignment:
Q  105 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||| |||||||||| |||||  ||| ||||||||| ||||| |||||| | ||||||  |||||||||||||||| ||||||||    
T  31537923 ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 7195917 - 7196005
Alignment:
Q  103 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||| ||| |||| |||  ||||| ||||||||| ||||||  ||||||| ||||||| |||  ||||||||||||||    
T  7195917 agctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagttttc 7196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 29915348 - 29915288
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttg 171  Q
    ||||||||||| |||| ||| |||||||||||||||||||| | | |||||| ||||||||    
T  29915348 ctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 29964501 - 29964441
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttg 171  Q
    ||||||||||| |||| ||| |||||||||||||||||||| | | |||||| ||||||||    
T  29964501 ctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 32414637 - 32414581
Alignment:
Q  128 caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    |||||| |||||| |||||||||||||  |||||| ||||||| |||||||||||||    
T  32414637 caaatgagcggtgagattgatccccttaaattagtcgattcttagatcggataccga 32414581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 1242085 - 1242139
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggat 158  Q
    |||||| |||||||||||| ||| ||| |||||||||| |||| |||||||||||    
T  1242085 gctctggctttaaacggggtcccgcaagtgggcggtggaattggtccccttggat 1242139  T

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Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 11390758 - 11390800
Alignment:
Q  148 tccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||||||||||||| ||||||||    
T  11390758 tcccctcggattagtcgattcttggatcggatactgagttttc 11390800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 14343374 - 14343304
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggat 174  Q
    |||||| ||||||||||   ||||||| || ||||| | |||||||||||| ||||||| |||||||||||    
T  14343374 gctctgcctttaaacggtatcccacaagtgagcggtagaattgatccccttagattagtcgattcttggat 14343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 53288791 - 53288713
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||| |||| || ||||| ||||  |||||| | |||||| |||| ||||||||| |||| ||||||    
T  53288791 ctttaaacggggccccgcaaacggacggtgagattagtcccctcgaattagtcgattattggatcggttaccaagtttt 53288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 55287929 - 55287983
Alignment:
Q  136 cggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||  |||||||| |||||| |||| |||||||||||||||| |||||    
T  55287929 cggtgggattagtccccttgaattagtcgattattggatcggataccgaattttc 55287983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 37351558 - 37351454
Alignment:
Q  86 atacagagcttgctctg--agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccg 183  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||| |||||| |||||||| | | ||||||||||||||||    
T  37351558 atacagagcttgctctggaagctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccg 37351459  T
Q  184 agttt 188  Q
    |||||    
T  37351458 agttt 37351454  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 26513233 - 26513148
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||| |||||||| |||||||||||| || |||||| |||||||| ||||||||||||| ||||||||||||    
T  26513233 gctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 4621323 - 4621236
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  4621323 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4621236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 8254838 - 8254751
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  8254838 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 24122134 - 24122220
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  24122134 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 7766813 - 7766726
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||||||    
T  7766813 gctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 34778457 - 34778535
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||||||||||||||  ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34778457 ctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 7578520 - 7578607
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||||||| | ||| |||| |||||||||| | |||| |||||||| |||| ||||||||||||||||||||||    
T  7578520 gctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

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Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 15059488 - 15059401
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||| |||| ||| ||||||||| ||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  15059488 gctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 32729655 - 32729742
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||| |||| ||| ||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  32729655 gctctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 24674504 - 24674590
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||| ||||    
T  24674504 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 17935880 - 17935965
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||||||||||||  ||| |||||| |||||||| ||| || |||||||| |||||||||||||||||||||||||    
T  17935880 gctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 2272455 - 2272542
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||||||| | |||||||| ||||||  |||||||||| ||||||||    
T  2272455 gctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgattctaagatcggatactgagttttc 2272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 22909982 - 22910069
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||  |||||| |||||||| ||| ||| |||||||||||||||||||    
T  22909982 gctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttc 22910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 7197333 - 7197247
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||| ||||||  ||| ||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||||    
T  7197333 gctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 27454921 - 27454863
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||    
T  27454921 tgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 48699877 - 48699957
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||| |||||  ||| ||||||||||||||| |||| | |||||||| ||||||||||||||||| |||||||||    
T  48699877 ctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 8779815 - 8779744
Alignment:
Q  111 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    |||||||||||||||| |||| | ||||||||||||| |||||| |||||||| ||||||| ||||||||||    
T  8779815 ctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 46607941 - 46608008
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| |||||||||||||||||||||| |||||||| | | ||||||||||||| |||||||||    
T  46607941 ccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 9500441 - 9500355
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||| ||||| |||| ||||||||| ||||| || | | |||||||| ||||||||||||||||| ||||||||    
T  9500441 gctctggctttaaacggagcccccacaagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 21726847 - 21726921
Alignment:
Q  111 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    ||||||||||| |||| |||| ||||||||||| ||||||||||  ||||| | |||||||||||||||||||||    
T  21726847 ctttaaacgggtcccccacaagtgggcggtggggttgatcccctcagattaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 35138119 - 35138185
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||||||||||||||| |||| |||||||| | | ||||||||||||||||||||||    
T  35138119 ccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 1379009 - 1379090
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgag 185  Q
    |||||| ||||||||||| |||| ||| ||| ||||| ||||| ||||||  ||||||| ||||||| ||||||||||||||    
T  1379009 gctctggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 40802154 - 40802069
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||| |||| ||| |||| |||| ||||| ||| || | |||||| |||||||| |||| ||||||||||||    
T  40802154 gctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  143 attgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  138 gtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  23041668 gtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  139 tgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| |||||| |||| ||| ||||||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 9926212 - 9926146
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| |||||||||||||||||||| || ||||||| | | ||| ||||||||||||||||||    
T  9926212 ccccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagtttt 9926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 27159205 - 27159283
Alignment:
Q  112 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||| |||| ||| ||| ||||||||||| ||||||  ||||||| |||  |||||||||||| |||||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 43770049 - 43769975
Alignment:
Q  105 ctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggat 179  Q
    ||||||| || || ||| |||||||||||||||||||||||| |||| | | |||||| |||||| |||||||||    
T  43770049 ctctgaccttgaatgggaccccacaaatgggcggtgggattggtcccttcgaattagtcgattctaggatcggat 43769975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 18646964 - 18647045
Alignment:
Q  104 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    |||||| |||||||||| |||||   || ||||||||| |||||||||||| | |||||| |||||||| ||||||||||||    
T  18646964 gctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccga 18647045  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 36155945 - 36155888
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| |||| |   |||||| ||||||||||||||||||||||||||    
T  36155945 tgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 45331701 - 45331621
Alignment:
Q  111 ctttaaacggggc--cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||  ||| ||| ||| |||||||||| |||||||  ||||| | |||||||| |||||||||||||||||    
T  45331701 ctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 18533808 - 18533724
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||||||  ||| ||||| ||||||||| ||||||   |||| | ||||||| ||||||||||| ||||||    
T  18533808 tctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 30677307 - 30677374
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| ||||||  ||||||| | |||||||| |||||| |||||||||    
T  30677307 ccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 45859122 - 45859043
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| |||||||  ||| |||| ||| |||||| |||||| |||||||| |||| |||||||||||||||| ||||    
T  45859122 ctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggataccgaatttt 45859043  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 23734234 - 23734315
Alignment:
Q  111 ctttaaacgggg--ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||  |||| ||| |||||||||  |||| ||||||  ||||||| |||||||| |||||||||| |||||||    
T  23734234 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 23741426 - 23741507
Alignment:
Q  111 ctttaaacgggg--ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||  |||| ||| |||||||||  |||| ||||||  ||||||| |||||||| |||||||||| |||||||    
T  23741426 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 809358 - 809419
Alignment:
Q  128 caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||||| | || | ||| |||| ||||||||||| |||||| |||||||    
T  809358 caaatgggcggtgggattggttccttcggagtagtcgattcttggattggatactgagtttt 809419  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 33905594 - 33905509
Alignment:
Q  106 tctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| |||||||||||||| ||  || ||| ||||||||||||||||||   |||  | ||||||| |||||||||||||||||||    
T  33905594 tctggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagttttc 33905509  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 8077758 - 8077841
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 187  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| ||||| | ||||| | |||| |||||||||| ||||||||    
T  8077758 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccc-tcgattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 40145945 - 40145889
Alignment:
Q  125 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    |||||| |||| |||| | ||| |||||| |||||||| ||||||||||||||||||    
T  40145945 ccacaagtgggtggtgagtttggtcccctcggattagtcgattcttggatcggatac 40145889  T

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Target: scaffold0576 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 5168 - 5081
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  5168 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 5081  T

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Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 2751386 - 2751473
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  2751386 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2751473  T

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Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 3851872 - 3851958
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3851872 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 21217912 - 21217832
Alignment:
Q  111 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||| |||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  21217912 ctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttc 21217832  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 22120003 - 22120090
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  22120003 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 40542996 - 40542909
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  40542996 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 654790 - 654704
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||    
T  654790 gctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 21835266 - 21835353
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||    
T  21835266 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 23092211 - 23092298
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||    
T  23092211 gctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagttttc 23092298  T

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Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 29861785 - 29861872
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||    
T  29861785 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 7275392 - 7275478
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  7275392 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 17197036 - 17196950
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  17197036 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

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Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 27312268 - 27312354
Alignment:
Q  105 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||| |||||  ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  27312268 ctctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 22638403 - 22638488
Alignment:
Q  104 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||    
T  22638403 gctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 16374116 - 16374196
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||| ||||  ||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  16374116 ctttaaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 11997964 - 11998051
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  11997964 gctctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 42913599 - 42913512
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  42913599 gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 18044222 - 18044308
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||||||| |||| |||| ||||| |||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  18044222 gctctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 28089935 - 28090021
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||| |||| ||| |||||| || ||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  28089935 gctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 19421346 - 19421431
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| || ||| |||||||| |||||||| ||| ||||||||||||    
T  19421346 gctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 31712959 - 31712902
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  31712959 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 7175928 - 7175861
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  7175928 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttc 7175861  T

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Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 10091303 - 10091389
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||| |||| ||| |||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  10091303 gctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagttttc 10091389  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 22703601 - 22703688
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||| ||||||||||| |||||||    
T  22703601 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 31274029 - 31274115
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||| || ||| ||||| ||| ||||| |||||| | |||||| |||||||||| ||||||||||||||||    
T  31274029 gctctggctttaaacggggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 31197712 - 31197792
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||  ||| ||| ||||||||||| ||||||  ||||||| ||||||||||||||||| |||||||||    
T  31197712 ctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 23012594 - 23012507
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||||||| |||| ||||||||||||||| |||||| | ||||||  |||| | |||||||||||||||||||    
T  23012594 gctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttttc 23012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 27009474 - 27009561
Alignment:
Q  104 gctctgactttaaacggggcccca-caaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||| ||||||   |||||| ||||||||||| ||||||||||||||    
T  27009474 gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagtttt 27009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 43785377 - 43785298
Alignment:
Q  112 tttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||| || ||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||||||||| ||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgagctttc 43785298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 25333519 - 25333603
Alignment:
Q  105 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||| || ||||  ||| ||||| ||||||||| |||||| |||||||| ||||||||||||||| ||||||||||    
T  25333519 ctctgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 32849706 - 32849791
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||| ||| | |||| || ||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  32849706 gctctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 1766217 - 1766149
Alignment:
Q  116 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 184  Q
    ||||||||||||||| |||||||| |||||| |||||| |||||||| | | |||| ||||||||||||    
T  1766217 aacggggccccacaagtgggcggttggattggtcccctcggattagtcggtacttgaatcggataccga 1766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 2344421 - 2344501
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||| ||||  ||| || |||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  2344421 ctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 9683942 - 9684026
Alignment:
Q  105 ctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||| |||||||||||| |||||||| |||||||| |||| | |||||| |||||| | |||||||||||||  ||||||||||    
T  9683942 ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 21574168 - 21574101
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||| | ||||||| ||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  21574168 ccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 8943467 - 8943409
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 181  Q
    |||| ||| ||||||||| ||||| |||||||| |||||| ||||||||||||||||||    
T  8943467 ccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 41907599 - 41907514
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||| ||||||  ||| |||| |||||||||| |||||  | |||||| ||||||||||||||||||||||||||    
T  41907599 gctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcccccag-attagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 39145737 - 39145652
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||  ||| ||| ||||||||||| |||||| | |||||| |||||||| ||| |||||| ||||||    
T  39145737 gctctggctttaaacgggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 2103170 - 2103255
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||| ||||||||||||||| |||| | |||||||| ||||| || ||||||||||||||||||    
T  2103170 gctctggctttaaatggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcatg-atcggataccgagttttc 2103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 9718073 - 9717986
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| || ||| | |||||| | |||||| |||| |||| ||||||||    
T  9718073 gctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaatcgaatactgagttttc 9717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 27704136 - 27704202
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| |||| |||| ||||||||||||  ||||||| |||||||| ||| |||||||||||||    
T  27704136 ccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 28950986 - 28951072
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| ||| | ||| | ||||||||||||| |||||| | | |||   |||||||||||||||||||||||||    
T  28950986 gctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 36772389 - 36772303
Alignment:
Q  104 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||    | |||||||||| |||  ||| || |||||||| ||||||| ||||||||||||||||||    
T  36772389 gctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 17212202 - 17212247
Alignment:
Q  137 ggtgggattgatccccttggattagtagattcttggatcggatacc 182  Q
    |||||||||| |||||| |||||||| |||||||||||| ||||||    
T  17212202 ggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  134 ggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 187  Q
    ||||||||||||| |||||| || ||||| | ||||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 264485 - 264400
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  264485 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 651436 - 651521
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  651436 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 837171 - 837256
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  837171 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 28193589 - 28193674
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  28193589 gctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 2639497 - 2639410
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  2639497 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 3734709 - 3734622
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3734709 gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 4718760 - 4718847
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  4718760 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 8765612 - 8765525
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8765612 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 32879394 - 32879481
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||    
T  32879394 gctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 39349371 - 39349458
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  39349371 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 21603345 - 21603431
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  21603345 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 34237741 - 34237654
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34237741 gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34237654  T

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Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 10292169 - 10292255
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||| | |||||||| ||||||||||||| ||||||||||||    
T  10292169 gctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

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Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 14633091 - 14633156
Alignment:
Q  125 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  14633091 ccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 2618301 - 2618388
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||| |||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||||    
T  2618301 gctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttc 2618388  T

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Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 42328119 - 42328206
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |||| ||| || |||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  42328119 gctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 42328206  T

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Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 42643188 - 42643118
Alignment:
Q  119 ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  42643188 ggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 20306023 - 20306110
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  20306023 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 21092656 - 21092743
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  21092656 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

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Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 19471724 - 19471812
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19471724 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19471812  T

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Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 19542648 - 19542736
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19542648 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19542736  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 19590048 - 19589960
Alignment:
Q  104 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19590048 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19589960  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 25248463 - 25248547
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||| || | ||| ||||||||||||||| |||||| |||||||| |||| || ||||||||||||||||||    
T  25248463 gctctggctttaaacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatt-tttgatcggataccgagtttt 25248547  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 28088401 - 28088478
Alignment:
Q  104 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggata 180  Q
    |||||||||||||| |||||| || ||| ||||||||||||||||||||||  || |||| |||||||||||||||||    
T  28088401 gctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 4698809 - 4698722
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||| |||||  ||| || |||||||||||| |||||| |||||||| ||||| ||||| |||||||||||||||    
T  4698809 gctctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttc 4698722  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 12312968 - 12313046
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| ||| |||||||| |||||||||||||||||||||| | |||||| | ||||| || |||| ||||||||||    
T  12312968 ctttaaatgggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 18128628 - 18128714
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| ||| ||  ||||||| | ||||||||||| ||||||||||||    
T  18128628 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

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Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 15259492 - 15259407
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||||||||||||  ||| |||||||||  |||| |||||| | |||||| |||||||||||||||| ||||||||    
T  15259492 gctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

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Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 34610773 - 34610686
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||| | ||| | ||| |||||||| | |||| |||||| | |||||| |||||||||||||||||||||||||||    
T  34610773 gctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

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Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 6953093 - 6953008
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||| |||||||  ||| | ||||||||||||| |||| | |||||||| ||||||||||||| ||||||||||||    
T  6953093 gctctggctttaaacagggcccccgcaagttggcggtgggattggtccc-tcggattagtcgattcttggatcgaataccgagtttt 6953008  T

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Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 7558034 - 7557952
Alignment:
Q  106 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||| ||||||||||  |||| ||| ||| ||||||||||| |||||| | |||||| |||| ||| ||||||||||||||||    
T  7558034 tctggctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

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Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 16990727 - 16990785
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||| || ||||||||||||||| | | ||||||||||||||| |||||||    
T  16990727 tgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttc 16990785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 18532263 - 18532300
Alignment:
Q  153 ttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18532263 ttggattagtcgattcttggatcggataccgagttttc 18532300  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 27746421 - 27746334
Alignment:
Q  104 gctctgactttaaacggggccccacaaatggg-cggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||||||||||| |||| || ||| |||  |||||| |||||||| ||||||||||||| ||| ||| |||||    
T  27746421 gctctggctttaaaaggggccccacaagtggggcgatggaattagtcccctcggattagtcgattcttggatcgaatatcgatttttc 27746334  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 2166831 - 2166897
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||||||||||||| ||||||  ||||||| |||| || ||| ||||||||||||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 9713621 - 9713655
Alignment:
Q  155 ggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| ||||||||||||||||||||||||||    
T  9713621 ggattagtcgattcttggatcggataccgagtttt 9713655  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 20470052 - 20470117
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||||||||||||| | || | |||||||| |||| |||||||||||||||||||||    
T  20470052 ccccgcaagtgggcggtgggattggttcc-tcggattagtcgatttttggatcggataccgagtttt 20470117  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 1219466 - 1219551
Alignment:
Q  106 tctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| |||||||||||| ||||| || |||||||| |||| | |||| | |||||||| ||||||| ||||| ||||||| |||||    
T  1219466 tctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaataccgaattttc 1219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 28964150 - 28964234
Alignment:
Q  106 tctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| |||||||||||| |||| ||| ||||| ||||||||| |||||| | |||||| ||||||| ||||| |||| ||||||||    
T  28964150 tctggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagtcgattcttagatcgaatactgagttttc 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 8387512 - 8387460
Alignment:
Q  136 cggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||| ||||||    
T  8387512 cggtgggattgatctcctcggattagttgatccttagatcggatactgagttt 8387460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 10544956 - 10544924
Alignment:
Q  158 ttagtagattcttggatcggataccgagttttc 190  Q
    ||||| |||||||||||||||||||||||||||    
T  10544956 ttagtcgattcttggatcggataccgagttttc 10544924  T

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Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 19660618 - 19660531
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||  ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19660618 gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 34844844 - 34844757
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34844844 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 40058938 - 40058851
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  40058938 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 52983730 - 52983815
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  52983730 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

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Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 5609288 - 5609201
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  5609288 gctctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 5609201  T

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Target: chr4; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 32986308 - 32986395
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||||||    
T  32986308 gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 44343625 - 44343712
Alignment:
Q  104 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||| |||||| | |||||| |||||||| ||||||||||||||||||    
T  44343625 gctctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 27528881 - 27528794
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||| ||||||||||  ||| ||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  27528881 gctctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 18875602 - 18875516
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||| |||||||| ||||  |||||||||||||||| ||||||||  ||| ||||||| ||||||||||||||    
T  18875602 gctctggctttaaacgggcccccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 34723910 - 34723996
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| |||| |||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  34723910 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 55961839 - 55961753
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | || | |||||| | |||||||| |||| ||||||| |||||    
T  55961839 gctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaatcgattcttgaatcgaataccgaattttc 55961753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 35229278 - 35229365
Alignment:
Q  104 gctctgactttaaacggggcccc--acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||| ||||  |||| || |||||||||||| |||||| | |||||| ||||||||||||||||||||| ||||    
T  35229278 gctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 46714511 - 46714591
Alignment:
Q  111 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||||  ||| ||||||||||||||| |||||| ||||||||  ||||||| ||||||||||||||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttc 46714591  T

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Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 32990546 - 32990633
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| ||| |||| ||||||||||||| |||| ||||||||    
T  32990546 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 45787790 - 45787703
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||| |||||||  ||| ||| ||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  45787790 gctctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 54127428 - 54127341
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | |||||||| ||||||| ||||||||    
T  54127428 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 22488112 - 22488027
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||   |||||| | | ||||||||||||||| |||||||    
T  22488112 tctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttc 22488027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 23639768 - 23639821
Alignment:
Q  136 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  23639768 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 23645426 - 23645479
Alignment:
Q  136 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  23645426 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 189
Target Start/End: Original strand, 51535730 - 51535818
Alignment:
Q  103 agctctgactttaaacggggcccca--caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| ||||||||||||||||   ||| ||||||||||||||| |||||| | |||||| ||||||| ||||||||||||| ||||    
T  51535730 agctctggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 52494628 - 52494685
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  52494628 tgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 20078070 - 20077986
Alignment:
Q  104 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 187  Q
    |||||| ||||||||||||||||   || ||||||||||||||  | |||| |||||||| ||||||||||||||||||||||||    
T  20078070 gctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Original strand, 4064991 - 4065057
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| ||||||||||||||| |||||| |||||||| |||| |||||||||||| ||| ||||    
T  4064991 ccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 9978575 - 9978509
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||||||||||||| |||| | |||||||| ||||||| ||||||||||||||||||    
T  9978575 ccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 20566461 - 20566547
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| |||||||||| |||||  ||| |||||| |||||||| ||||||  ||||||| ||||||||||||||||| ||||||||    
T  20566461 gctctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 51595133 - 51595219
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||||||  |||| ||| ||| |||||| ||||||| | | |||||| | ||||||||||||||||||||||||||    
T  51595133 gctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 9517727 - 9517650
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggata 180  Q
    |||||||||||||||||||||||  ||  |||| |||| ||||| |||||| |||||||| |||||||||||||||||    
T  9517727 gctctgactttaaacggggcccccgcaggtgggtggtgagattggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 13550320 - 13550404
Alignment:
Q  105 ctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||| |||||||||||| |||||||| |||||||| |||| | |||||| |||||| | |||||||||||||  ||||||||||    
T  13550320 ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 23131499 - 23131435
Alignment:
Q  126 cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||| |||||||| |||||| |||||| | |||||| ||||||| |||||||||||||||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 4912037 - 4912124
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||| |||||  ||| |||| |||| |||||||||||  | |||||| |||||||||||| ||||||||||||||    
T  4912037 gctctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttc 4912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 36131592 - 36131509
Alignment:
Q  108 tgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||||||||||| ||||   || ||||||||||||||| |||||| |||||||| |||| || |||| ||||||||||||||    
T  36131592 tgactttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 7392022 - 7391964
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||| |||||| |||||||| | ||||| ||| |||||||||||||||    
T  7392022 tgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 33696365 - 33696279
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||| ||||||||  ||| ||||||||| ||||| ||| || ||||||||  |||||||||||||||| ||||||||    
T  33696365 gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 43719144 - 43719086
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    ||||||||||||||| ||  || |||||||| ||||||||||||||||||||| |||||    
T  43719144 tgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttc 43719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 49287976 - 49288054
Alignment:
Q  111 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||  ||| ||| |||||| || ||||| |||||| |||||||| |||||||||||| ||||| |||||||    
T  49287976 ctttaaacgggctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 37302619 - 37302684
Alignment:
Q  124 cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||| |||||| |||||||| |||| | |||||||| |||||||| |||||||||||| ||||    
T  37302619 cccacaagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 21387571 - 21387486
Alignment:
Q  104 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||||  |||| ||| |||||||||||  || |||||| |||||||| |||| |||||||||||||| |||||||    
T  21387571 gctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 13584340 - 13584253
Alignment:
Q  104 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| || ||| | |||||| | |||||| |||| |||| ||||||||    
T  13584340 gctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaatcgaatactgagttttc 13584253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 27574429 - 27574516
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||| ||||||||| | ||| |||||| |||||| |  ||||||||||||||||| ||||||||    
T  27574429 gctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttc 27574516  T

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Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 53787143 - 53787056
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| |||||||||| |||||  ||||||||||||||||||  ||||||  ||||||| | || |||||||| |||||| ||||||    
T  53787143 gctctggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggtttttggatcgaataccgggttttc 53787056  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 25852362 - 25852412
Alignment:
Q  139 tgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||| |||||| |||||||| | |||||||| |||||||||||||||    
T  25852362 tgggattggtcccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 33289189 - 33289251
Alignment:
Q  127 acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||| ||| ||||| ||||  |||||| |||||||| |||||||||||||||||||| |||||    
T  33289189 acaagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 41621669 - 41621583
Alignment:
Q  103 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||| | |||||||  ||||||| | | ||||||||||||| |||||||    
T  41621669 agctctgactttaaatggggtccctacaagtgggtggtgggactaatcccctcagattagtcggtccttggatcggataacgagttt 41621583  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 17637908 - 17637852
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||  |||| |||||| |||||||| |||||||| |||||||||||||||||    
T  17637908 tgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagtttt 17637852  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 6427102 - 6427185
Alignment:
Q  106 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||||||| |||||||||||| ||| | ||||||||||  |||| |||||||| | | |||||  ||||||||||||||||    
T  6427102 tctggctttaaatggggccccacaagtggacagtgggattgaatccctcggattagtcggtccttgg-ccggataccgagttttc 6427185  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 9646273 - 9646217
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||| |||||||||||||||| |||||||| | |  ||||||||| ||||||||||    
T  9646273 tgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 20527111 - 20527035
Alignment:
Q  112 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    ||||||| |||||||  || |||||||| |||||| || ||| |||||||| |||| |||||||  |||||||||||    
T  20527111 tttaaacagggccccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 24672337 - 24672305
Alignment:
Q  157 attagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||||||||||||    
T  24672337 attagtcgattcttggatcggataccgagtttt 24672305  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 25969587 - 25969504
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 188  Q
    |||||| ||||||||||| ||||  || || |||||||||||| | |||| | |||||| |||||||| ||||||||| ||||||    
T  25969587 gctctggctttaaacgggcccccgtaagtgagcggtgggattggt-ccctcgaattagtcgattcttgaatcggatactgagttt 25969504  T

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Target: scaffold0217 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 7394 - 7309
Alignment:
Q  105 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  7394 ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

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Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 39205 - 39290
Alignment:
Q  106 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||    
T  39205 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

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Target: scaffold0328 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 13127 - 13047
Alignment:
Q  110 actttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||  ||| ||| ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  13127 actttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagtttt 13047  T

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Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 40436 - 40522
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  40436 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 40522  T

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Target: scaffold0049 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 66865 - 66951
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | ||||||||||||||||||||||    
T  66865 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 161940 - 162007
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||    
T  161940 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

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Target: scaffold0459 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 10779 - 10694
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| |||||| | ||||||  |||||| |||||||||||||||||||    
T  10779 gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagttttc 10694  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 52957 - 52870
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||  |||||||| |||||| ||| || |||||||| |||||||| ||||||||||||||||||    
T  52957 gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

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Target: scaffold1175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 2512 - 2426
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| ||||||||   | |||| |||||||||||||||||    
T  2512 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

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Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 8508 - 8451
Alignment:
Q  132 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||||||| ||| || |||||||| ||||||| ||||||||||||||||||    
T  8508 tgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

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Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 9385 - 9299
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||| ||||||||  ||| ||| ||||||||||| |||||| | |||||| ||||||| |||||||||||||||||||    
T  9385 gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

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Target: scaffold0366; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 12086 - 12000
Alignment:
Q  104 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatc-ggataccgagttttc 190  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| |||||| | ||||||  |||||| |||| |||||||||||||||    
T  12086 gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcgggataccgagttttc 12000  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 41730 - 41644
Alignment:
Q  104 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||||| ||||||||||||||||  ||| |||||  |||||||| |||||| |||||||| ||||||| |||||||||| ||||||||    
T  41730 gctctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatacagagttttc 41644  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 32419 - 32485
Alignment:
Q  123 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 190  Q
    |||| ||| |||| |||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  32419 ccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 32485  T

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Target: scaffold0623 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 1142 - 1057
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||| ||||||| ||||||||  ||| ||| ||||||||||| |||||| | |||||| ||||||| ||||||||||||||||||    
T  1142 gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 189
Target Start/End: Complemental strand, 97452 - 97366
Alignment:
Q  104 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||| ||| || | |||||| | || ||||| |||||||||||||||    
T  97452 gctctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 123134 - 123066
Alignment:
Q  120 gggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 189  Q
    ||||||||||| || | |||||||||| |||||| |||||| | || |||||||||||||||| ||||||    
T  123134 gggccccacaagtgtgtggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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