View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11498_low_14 (Length: 240)
Name: NF11498_low_14
Description: NF11498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11498_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26606382 - 26606604
Alignment:
| Q |
1 |
atcgcttgacctatcttcaaatgaaaaccaataatcagaaataagaagatggtagtactcggcaagatgtaagcaagaccaaggaacattgatccatcgc |
100 |
Q |
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||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
26606382 |
atcgcttgacctatcttcaaatgaaaatcaatcatcagaaataagaagatggtagtactcgggaagatgtaagcaagaccaaggaacattgatccatcgc |
26606481 |
T |
|
| Q |
101 |
ttacaatagaagtcgaaagatgcaggataaaatcgttttgaattgggaaaagagacacataacgggtacgtgtagagactcttgcataagaatgagctga |
200 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26606482 |
ttacaatagaagtcgaaagatgcaagataaaatcgttttgaattgggaaaagagacacataacgggtacgtgtagagactcttgcataagaatgagctga |
26606581 |
T |
|
| Q |
201 |
tgatgcagaagattctgagttag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
26606582 |
tgatgcagaagattctgagttag |
26606604 |
T |
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