View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1149_high_89 (Length: 272)
Name: NF1149_high_89
Description: NF1149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1149_high_89 |
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Alignment Details
Target: chr8 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11812620 - 11812499
Alignment:
| Q |
1 |
atttgtttgagtcaatttttaattcaaaaaaccattttcatataaatatttgtcatgtttaatacataaacggttgttttgaaaggcttgaaaggttata |
100 |
Q |
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| T |
11812620 |
atttgtttgagtcaatttttaattcaaaaaaccattttcatataaatatttgtcatgtttaatacataaacggttgttttgaaaggcttcaaaggttaca |
11812521 |
T |
|
| Q |
101 |
atataagttgttgatatatata |
122 |
Q |
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| T |
11812520 |
atataagttgttgatatatata |
11812499 |
T |
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