View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1149_low_1 (Length: 900)

Name: NF1149_low_1
Description: NF1149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1149_low_1
NF1149_low_1
[»] chr8 (49 HSPs)
chr8 (13-390)||(20529239-20529616)
chr8 (5-390)||(25122915-25123297)
chr8 (13-388)||(41247138-41247514)
chr8 (86-390)||(37612222-37612526)
chr8 (85-390)||(22221739-22222045)
chr8 (85-390)||(22228081-22228387)
chr8 (177-390)||(39115912-39116125)
chr8 (13-388)||(20561014-20561394)
chr8 (13-388)||(20572576-20572956)
chr8 (71-327)||(19992509-19992766)
chr8 (13-390)||(20653418-20653796)
chr8 (177-390)||(43372906-43373119)
chr8 (199-390)||(16404419-16404610)
chr8 (177-390)||(16193270-16193483)
chr8 (177-390)||(24716267-24716480)
chr8 (158-327)||(6999772-6999942)
chr8 (177-390)||(275079-275292)
chr8 (177-390)||(640557-640770)
chr8 (177-390)||(826363-826576)
chr8 (177-388)||(29760588-29760798)
chr8 (177-390)||(24385167-24385380)
chr8 (177-388)||(24928235-24928445)
chr8 (74-390)||(22981813-22982132)
chr8 (275-377)||(21681728-21681831)
chr8 (267-389)||(25296879-25297002)
chr8 (267-389)||(25758899-25759022)
chr8 (318-388)||(41248079-41248150)
chr8 (271-387)||(21258924-21259041)
chr8 (131-390)||(38534253-38534514)
chr8 (267-390)||(22735271-22735396)
chr8 (267-327)||(7783628-7783688)
chr8 (295-389)||(33610436-33610531)
chr8 (295-389)||(23158925-23159019)
chr8 (313-390)||(39446150-39446228)
chr8 (330-390)||(9950536-9950597)
chr8 (313-389)||(31193731-31193808)
chr8 (295-347)||(27232543-27232595)
chr8 (227-327)||(5238737-5238836)
chr8 (13-57)||(20482085-20482128)
chr8 (131-246)||(21681606-21681722)
chr8 (295-347)||(23151273-23151325)
chr8 (313-388)||(25710492-25710568)
chr8 (295-350)||(25281719-25281774)
chr8 (295-389)||(29307186-29307281)
chr8 (335-388)||(6999736-6999790)
chr8 (335-388)||(19992473-19992527)
chr8 (313-347)||(33529193-33529227)
chr8 (313-350)||(20496298-20496335)
chr8 (13-46)||(21681488-21681521)
[»] chr6 (39 HSPs)
chr6 (13-390)||(31628672-31629049)
chr6 (83-390)||(18777682-18777990)
chr6 (5-389)||(18433117-18433489)
chr6 (83-390)||(25633122-25633430)
chr6 (83-390)||(25743876-25744183)
chr6 (76-390)||(18570826-18571144)
chr6 (13-390)||(18399422-18399803)
chr6 (87-390)||(22441488-22441793)
chr6 (89-390)||(32899349-32899651)
chr6 (177-390)||(18583954-18584167)
chr6 (177-390)||(35008860-35009073)
chr6 (13-261)||(16106999-16107246)
chr6 (13-240)||(16086500-16086726)
chr6 (198-387)||(23148634-23148821)
chr6 (190-390)||(13014108-13014309)
chr6 (177-390)||(13620223-13620435)
chr6 (177-390)||(19982699-19982910)
chr6 (177-390)||(35014562-35014774)
chr6 (199-327)||(14128161-14128288)
chr6 (267-390)||(18001913-18002037)
chr6 (181-327)||(29666481-29666624)
chr6 (224-347)||(22868072-22868194)
chr6 (302-390)||(16086737-16086825)
chr6 (267-385)||(27752158-27752274)
chr6 (316-390)||(15863208-15863283)
chr6 (313-390)||(21410457-21410535)
chr6 (313-388)||(15079154-15079230)
chr6 (267-388)||(35135420-35135542)
chr6 (267-389)||(18628993-18629116)
chr6 (316-389)||(25654902-25654975)
chr6 (227-327)||(18086337-18086437)
chr6 (13-57)||(18777613-18777657)
chr6 (295-350)||(14672160-14672215)
chr6 (130-192)||(25366829-25366891)
chr6 (13-46)||(18570764-18570797)
chr6 (267-327)||(1649621-1649681)
chr6 (303-390)||(16107237-16107324)
chr6 (13-52)||(32899274-32899313)
chr6 (272-388)||(17082586-17082703)
[»] chr1 (40 HSPs)
chr1 (70-390)||(22402496-22402817)
chr1 (95-390)||(35055313-35055609)
chr1 (87-390)||(41212575-41212878)
chr1 (71-390)||(35521731-35522057)
chr1 (13-390)||(21718711-21719092)
chr1 (177-388)||(13103769-13103980)
chr1 (180-390)||(20887234-20887444)
chr1 (167-385)||(44320257-44320475)
chr1 (177-390)||(20446296-20446509)
chr1 (177-390)||(21860647-21860860)
chr1 (198-385)||(41219060-41219248)
chr1 (13-325)||(27329215-27329528)
chr1 (177-390)||(20532060-20532273)
chr1 (177-390)||(20931955-20932168)
chr1 (177-390)||(20913640-20913853)
chr1 (210-390)||(20346674-20346853)
chr1 (177-388)||(37843889-37844100)
chr1 (13-369)||(49968132-49968480)
chr1 (177-388)||(44034386-44034589)
chr1 (131-386)||(16646515-16646773)
chr1 (316-390)||(15860883-15860958)
chr1 (287-390)||(20348288-20348392)
chr1 (733-780)||(21925994-21926041)
chr1 (313-390)||(16657427-16657505)
chr1 (181-327)||(41394844-41394988)
chr1 (313-390)||(36355674-36355752)
chr1 (71-187)||(20346562-20346679)
chr1 (267-327)||(20832135-20832195)
chr1 (468-510)||(21926151-21926193)
chr1 (267-390)||(51627076-51627200)
chr1 (313-389)||(4975083-4975160)
chr1 (295-389)||(22142748-22142842)
chr1 (305-389)||(49996691-49996776)
chr1 (331-390)||(22828827-22828887)
chr1 (227-327)||(51453140-51453239)
chr1 (295-350)||(18621339-18621394)
chr1 (295-350)||(24243690-24243745)
chr1 (335-390)||(41394970-41395025)
chr1 (13-53)||(9783789-9783830)
chr1 (80-172)||(41218962-41219055)
[»] chr4 (48 HSPs)
chr4 (68-390)||(20812934-20813258)
chr4 (83-390)||(23269320-23269629)
chr4 (13-390)||(16732655-16733033)
chr4 (71-388)||(34395799-34396117)
chr4 (83-390)||(44347375-44347683)
chr4 (85-390)||(44056469-44056776)
chr4 (163-390)||(53704140-53704367)
chr4 (71-390)||(8871859-8872180)
chr4 (158-390)||(55375993-55376225)
chr4 (177-388)||(54117676-54117887)
chr4 (83-327)||(53907162-53907404)
chr4 (116-387)||(5681924-5682197)
chr4 (22-390)||(819328-819685)
chr4 (177-390)||(25118590-25118802)
chr4 (22-388)||(21958860-21959219)
chr4 (13-326)||(30458389-30458687)
chr4 (210-388)||(12836612-12836791)
chr4 (267-390)||(13722483-13722606)
chr4 (177-390)||(18292929-18293142)
chr4 (224-390)||(30231908-30232074)
chr4 (198-386)||(9296151-9296340)
chr4 (180-390)||(122511-122722)
chr4 (198-386)||(9290280-9290469)
chr4 (267-388)||(39121005-39121128)
chr4 (200-350)||(13247060-13247207)
chr4 (13-388)||(45458253-45458619)
chr4 (313-390)||(15045592-15045670)
chr4 (313-390)||(15108754-15108832)
chr4 (13-181)||(30232090-30232258)
chr4 (267-390)||(13808916-13809040)
chr4 (267-390)||(34177050-34177174)
chr4 (296-389)||(41255781-41255875)
chr4 (271-390)||(27961695-27961815)
chr4 (295-390)||(52264921-52265018)
chr4 (313-388)||(13247196-13247272)
chr4 (225-347)||(40884991-40885113)
chr4 (313-390)||(37956432-37956510)
chr4 (272-389)||(47534463-47534581)
chr4 (267-389)||(15012697-15012819)
chr4 (267-327)||(15135488-15135549)
chr4 (73-156)||(18493947-18494031)
chr4 (335-390)||(30458670-30458725)
chr4 (25-126)||(12836853-12836953)
chr4 (227-327)||(16327440-16327539)
chr4 (131-186)||(37956599-37956654)
chr4 (229-327)||(13047733-13047831)
chr4 (313-386)||(14901992-14902066)
chr4 (224-309)||(17145184-17145268)
[»] chr3 (83 HSPs)
chr3 (13-388)||(54424495-54424870)
chr3 (68-390)||(6146163-6146480)
chr3 (13-390)||(6153720-6154095)
chr3 (70-390)||(16181335-16181657)
chr3 (71-390)||(17101875-17102195)
chr3 (83-390)||(13818062-13818371)
chr3 (83-390)||(19570078-19570386)
chr3 (78-390)||(316896-317210)
chr3 (71-390)||(38528265-38528585)
chr3 (83-390)||(34438740-34439036)
chr3 (79-388)||(35124245-35124558)
chr3 (202-390)||(12348697-12348886)
chr3 (73-390)||(14295980-14296299)
chr3 (73-390)||(14301607-14301926)
chr3 (68-390)||(14304581-14304906)
chr3 (177-390)||(15856669-15856882)
chr3 (210-390)||(7854624-7854811)
chr3 (200-390)||(13836278-13836468)
chr3 (177-390)||(19260256-19260468)
chr3 (210-390)||(16995476-16995657)
chr3 (177-388)||(19232406-19232616)
chr3 (177-390)||(45582250-45582462)
chr3 (177-390)||(51960535-51960749)
chr3 (177-390)||(3993187-3993400)
chr3 (177-390)||(12029598-12029811)
chr3 (210-388)||(22143726-22143903)
chr3 (177-390)||(33342514-33342726)
chr3 (159-390)||(14527464-14527696)
chr3 (13-390)||(50111456-50111814)
chr3 (177-390)||(5240133-5240346)
chr3 (177-390)||(54684721-54684934)
chr3 (177-390)||(2844827-2845038)
chr3 (81-390)||(53897982-53898290)
chr3 (177-390)||(2050430-2050643)
chr3 (13-390)||(17522273-17522653)
chr3 (199-389)||(19947355-19947546)
chr3 (181-388)||(54037526-54037733)
chr3 (179-390)||(55513510-55513720)
chr3 (210-390)||(17955409-17955590)
chr3 (200-390)||(13839532-13839722)
chr3 (136-390)||(11060392-11060647)
chr3 (267-388)||(30153628-30153750)
chr3 (177-327)||(28558809-28558957)
chr3 (279-390)||(3578809-3578920)
chr3 (177-311)||(17911986-17912117)
chr3 (137-390)||(40939735-40939988)
chr3 (313-390)||(39657308-39657386)
chr3 (13-222)||(30207702-30207909)
chr3 (78-187)||(16995652-16995762)
chr3 (313-390)||(55440256-55440334)
chr3 (267-390)||(11328369-11328493)
chr3 (271-390)||(12487183-12487303)
chr3 (295-385)||(17586343-17586434)
chr3 (199-390)||(48422221-48422414)
chr3 (70-130)||(13836158-13836219)
chr3 (206-327)||(16262104-16262224)
chr3 (80-141)||(17912142-17912203)
chr3 (318-390)||(55193422-55193495)
chr3 (295-389)||(8605564-8605659)
chr3 (295-350)||(19431630-19431685)
chr3 (199-309)||(54652074-54652183)
chr3 (306-388)||(12559627-12559709)
chr3 (313-381)||(14058634-14058704)
chr3 (210-327)||(2448752-2448868)
chr3 (13-46)||(12349001-12349034)
chr3 (293-350)||(15044664-15044721)
chr3 (313-389)||(15521727-15521804)
chr3 (13-46)||(55440589-55440622)
chr3 (335-390)||(28558939-28558995)
chr3 (131-187)||(55192629-55192685)
chr3 (136-187)||(3578693-3578744)
chr3 (71-130)||(12348918-12348977)
chr3 (80-145)||(13839422-13839488)
chr3 (13-47)||(17939048-17939082)
chr3 (267-309)||(18896566-18896608)
chr3 (313-390)||(38810395-38810473)
chr3 (80-172)||(7854532-7854625)
chr3 (293-350)||(12252198-12252255)
chr3 (71-120)||(17101190-17101239)
chr3 (305-350)||(17394102-17394147)
chr3 (13-57)||(34439061-34439106)
chr3 (13-46)||(40939610-40939643)
chr3 (227-328)||(41270699-41270799)
[»] scaffold0021 (6 HSPs)
scaffold0021 (85-390)||(131637-131944)
scaffold0021 (131-390)||(12655-12915)
scaffold0021 (131-390)||(26033-26293)
scaffold0021 (131-390)||(16502-16762)
scaffold0021 (13-46)||(16383-16416)
scaffold0021 (13-46)||(25914-25947)
[»] scaffold0396 (1 HSPs)
scaffold0396 (13-390)||(11095-11471)
[»] scaffold0037 (2 HSPs)
scaffold0037 (13-390)||(24112-24491)
scaffold0037 (300-390)||(97584-97675)
[»] scaffold0008 (3 HSPs)
scaffold0008 (13-368)||(23174-23527)
scaffold0008 (183-389)||(35564-35770)
scaffold0008 (177-390)||(127610-127823)
[»] scaffold0673 (2 HSPs)
scaffold0673 (5-390)||(6234-6619)
scaffold0673 (83-390)||(223-520)
[»] scaffold0035 (2 HSPs)
scaffold0035 (81-390)||(108851-109160)
scaffold0035 (81-390)||(117352-117661)
[»] chr5 (42 HSPs)
chr5 (13-390)||(20712558-20712935)
chr5 (5-390)||(21397567-21397949)
chr5 (13-346)||(11336615-11336948)
chr5 (177-390)||(27181981-27182194)
chr5 (199-390)||(4865900-4866092)
chr5 (210-390)||(1167620-1167801)
chr5 (178-390)||(21646141-21646352)
chr5 (177-390)||(11584686-11584899)
chr5 (152-385)||(28262071-28262304)
chr5 (177-390)||(21205552-21205765)
chr5 (68-390)||(24182521-24182844)
chr5 (177-390)||(21651327-21651539)
chr5 (272-389)||(23515270-23515387)
chr5 (190-390)||(23980916-23981116)
chr5 (180-390)||(25944065-25944272)
chr5 (210-390)||(32951338-32951516)
chr5 (224-390)||(19406234-19406400)
chr5 (136-390)||(23467041-23467297)
chr5 (78-236)||(21907266-21907426)
chr5 (313-389)||(22662094-22662171)
chr5 (313-390)||(433218-433296)
chr5 (313-390)||(7729207-7729285)
chr5 (313-390)||(28902980-28903058)
chr5 (313-390)||(28939375-28939453)
chr5 (313-388)||(19349798-19349875)
chr5 (75-185)||(22662271-22662382)
chr5 (306-387)||(23418000-23418082)
chr5 (313-389)||(3674650-3674727)
chr5 (313-389)||(37984131-37984208)
chr5 (267-326)||(2032547-2032604)
chr5 (206-325)||(11211569-11211687)
chr5 (267-326)||(108314-108373)
chr5 (77-187)||(1167796-1167907)
chr5 (22-113)||(21907190-21907280)
chr5 (313-386)||(16596258-16596331)
chr5 (313-389)||(5450223-5450300)
chr5 (314-390)||(23494673-23494750)
chr5 (76-172)||(11211699-11211794)
chr5 (227-327)||(16536847-16536946)
chr5 (227-327)||(37053394-37053493)
chr5 (272-347)||(6457323-6457398)
chr5 (295-350)||(19315845-19315900)
[»] scaffold0034 (3 HSPs)
scaffold0034 (13-390)||(41142-41521)
scaffold0034 (13-366)||(46649-47003)
scaffold0034 (177-390)||(80491-80703)
[»] chr7 (59 HSPs)
chr7 (77-381)||(47290328-47290632)
chr7 (13-390)||(12369227-12369603)
chr7 (5-388)||(44865704-44866075)
chr7 (13-390)||(11287900-11288279)
chr7 (101-390)||(12759551-12759842)
chr7 (131-390)||(12247505-12247764)
chr7 (87-390)||(144191-144484)
chr7 (177-390)||(110674-110887)
chr7 (80-389)||(7283463-7283761)
chr7 (83-388)||(35095366-35095666)
chr7 (181-390)||(16212390-16212598)
chr7 (13-327)||(3895506-3895810)
chr7 (177-388)||(13862339-13862551)
chr7 (136-390)||(16569392-16569646)
chr7 (136-390)||(16596016-16596270)
chr7 (177-390)||(2029554-2029768)
chr7 (177-390)||(127052-127264)
chr7 (177-390)||(1936426-1936638)
chr7 (177-390)||(26069002-26069218)
chr7 (177-390)||(26069660-26069876)
chr7 (177-390)||(26093447-26093663)
chr7 (177-390)||(25124765-25124977)
chr7 (223-390)||(3060613-3060779)
chr7 (177-390)||(17816864-17817077)
chr7 (177-390)||(19049924-19050137)
chr7 (210-390)||(13036506-13036685)
chr7 (177-390)||(11580170-11580383)
chr7 (210-388)||(14419625-14419801)
chr7 (13-390)||(45451563-45451932)
chr7 (177-390)||(13321637-13321848)
chr7 (206-390)||(7293644-7293827)
chr7 (177-388)||(36053274-36053485)
chr7 (177-327)||(32493514-32493663)
chr7 (213-327)||(39046121-39046234)
chr7 (313-390)||(13275540-13275618)
chr7 (267-390)||(49047081-49047205)
chr7 (295-385)||(31501913-31502004)
chr7 (83-175)||(39046233-39046325)
chr7 (295-350)||(12193070-12193125)
chr7 (80-142)||(14419847-14419910)
chr7 (227-329)||(15441076-15441177)
chr7 (313-390)||(34240608-34240686)
chr7 (305-347)||(38424842-38424884)
chr7 (5-94)||(15822117-15822204)
chr7 (13-54)||(16569729-16569770)
chr7 (13-46)||(16595892-16595925)
chr7 (267-327)||(2189671-2189731)
chr7 (313-388)||(9612075-9612151)
chr7 (313-388)||(9839646-9839722)
chr7 (227-327)||(11516879-11516979)
chr7 (227-327)||(25291805-25291905)
chr7 (227-327)||(30261643-30261742)
chr7 (335-390)||(32493476-32493532)
chr7 (227-325)||(18979529-18979627)
chr7 (80-172)||(110881-110974)
chr7 (13-54)||(12247842-12247883)
chr7 (13-145)||(26069239-26069370)
chr7 (13-145)||(26069897-26070028)
chr7 (13-145)||(26093684-26093815)
[»] scaffold0044 (1 HSPs)
scaffold0044 (71-390)||(38841-39162)
[»] chr2 (41 HSPs)
chr2 (81-390)||(23836096-23836408)
chr2 (72-390)||(42535149-42535467)
chr2 (13-390)||(36890071-36890448)
chr2 (136-390)||(25602634-25602891)
chr2 (13-390)||(17367302-17367676)
chr2 (83-390)||(25875323-25875620)
chr2 (177-390)||(19794135-19794348)
chr2 (13-390)||(27262288-27262665)
chr2 (104-390)||(32466423-32466710)
chr2 (198-390)||(36981885-36982076)
chr2 (177-390)||(9652309-9652519)
chr2 (177-390)||(463337-463550)
chr2 (177-390)||(8891825-8892037)
chr2 (177-390)||(43642386-43642598)
chr2 (175-390)||(22863542-22863756)
chr2 (177-390)||(20626756-20626968)
chr2 (210-363)||(25264875-25265027)
chr2 (68-390)||(4447522-4447843)
chr2 (177-388)||(23805739-23805949)
chr2 (136-390)||(23821189-23821445)
chr2 (136-390)||(23830268-23830524)
chr2 (294-390)||(31145562-31145659)
chr2 (316-390)||(24293918-24293992)
chr2 (267-390)||(68711-68835)
chr2 (300-390)||(29023965-29024056)
chr2 (313-390)||(723152-723230)
chr2 (272-389)||(24885385-24885503)
chr2 (71-296)||(28974588-28974816)
chr2 (268-390)||(7322249-7322372)
chr2 (313-390)||(19433214-19433292)
chr2 (81-183)||(271717-271820)
chr2 (295-389)||(16446494-16446589)
chr2 (73-187)||(24570882-24570997)
chr2 (317-389)||(24086838-24086911)
chr2 (313-390)||(22579286-22579365)
chr2 (177-239)||(15633846-15633908)
chr2 (13-46)||(25602509-25602542)
chr2 (131-187)||(22579451-22579507)
chr2 (313-347)||(19668573-19668607)
chr2 (293-350)||(18995903-18995960)
chr2 (305-350)||(20280164-20280209)
[»] scaffold0016 (2 HSPs)
scaffold0016 (83-390)||(164765-165071)
scaffold0016 (177-390)||(165669-165882)
[»] scaffold0740 (1 HSPs)
scaffold0740 (70-390)||(4820-5142)
[»] scaffold0447 (2 HSPs)
scaffold0447 (13-390)||(9657-10031)
scaffold0447 (13-390)||(5043-5417)
[»] scaffold1867 (1 HSPs)
scaffold1867 (83-390)||(695-1003)
[»] scaffold0120 (7 HSPs)
scaffold0120 (81-390)||(22061-22359)
scaffold0120 (88-337)||(31767-32016)
scaffold0120 (88-337)||(46990-47239)
scaffold0120 (180-388)||(27415-27618)
scaffold0120 (13-57)||(21994-22038)
scaffold0120 (13-57)||(31693-31737)
scaffold0120 (13-57)||(47269-47313)
[»] scaffold0383 (1 HSPs)
scaffold0383 (13-390)||(7652-8026)
[»] scaffold0816 (1 HSPs)
scaffold0816 (83-390)||(2453-2761)
[»] scaffold0117 (1 HSPs)
scaffold0117 (24-390)||(10955-11321)
[»] scaffold0022 (5 HSPs)
scaffold0022 (131-388)||(111932-112191)
scaffold0022 (296-390)||(102358-102453)
scaffold0022 (267-385)||(132526-132645)
scaffold0022 (13-54)||(112269-112310)
scaffold0022 (131-187)||(102534-102590)
[»] scaffold0359 (2 HSPs)
scaffold0359 (13-390)||(1798-2165)
scaffold0359 (25-316)||(11120-11407)
[»] scaffold0190 (1 HSPs)
scaffold0190 (68-390)||(10474-10798)
[»] scaffold0338 (1 HSPs)
scaffold0338 (13-386)||(9470-9844)
[»] scaffold0183 (1 HSPs)
scaffold0183 (25-390)||(5077-5431)
[»] scaffold0001 (6 HSPs)
scaffold0001 (13-390)||(61290-61667)
scaffold0001 (89-390)||(70010-70313)
scaffold0001 (85-390)||(79275-79582)
scaffold0001 (224-342)||(172522-172640)
scaffold0001 (224-342)||(178225-178343)
scaffold0001 (13-52)||(70349-70388)
[»] scaffold0218 (2 HSPs)
scaffold0218 (177-390)||(4590-4803)
scaffold0218 (296-350)||(27026-27080)
[»] scaffold0011 (3 HSPs)
scaffold0011 (177-388)||(122598-122810)
scaffold0011 (163-388)||(254268-254493)
scaffold0011 (163-388)||(260874-261099)
[»] scaffold0116 (1 HSPs)
scaffold0116 (80-390)||(30644-30944)
[»] scaffold0083 (1 HSPs)
scaffold0083 (71-327)||(15400-15655)
[»] scaffold0068 (4 HSPs)
scaffold0068 (174-390)||(48767-48983)
scaffold0068 (174-390)||(62215-62431)
scaffold0068 (71-126)||(48681-48736)
scaffold0068 (71-126)||(62129-62184)
[»] scaffold0018 (1 HSPs)
scaffold0018 (198-390)||(50621-50811)
[»] scaffold0014 (2 HSPs)
scaffold0014 (71-388)||(85872-86192)
scaffold0014 (73-390)||(159843-160161)
[»] scaffold0310 (2 HSPs)
scaffold0310 (177-390)||(5807-6020)
scaffold0310 (80-147)||(6039-6105)
[»] scaffold0004 (1 HSPs)
scaffold0004 (177-390)||(192903-193116)
[»] scaffold0077 (2 HSPs)
scaffold0077 (177-386)||(36357-36563)
scaffold0077 (177-311)||(14949-15083)
[»] scaffold0537 (1 HSPs)
scaffold0537 (211-390)||(576-756)
[»] scaffold0480 (2 HSPs)
scaffold0480 (71-389)||(4646-4957)
scaffold0480 (278-390)||(8296-8407)
[»] scaffold1539 (2 HSPs)
scaffold1539 (177-390)||(176-392)
scaffold1539 (80-145)||(89-155)
[»] scaffold0122 (2 HSPs)
scaffold0122 (177-390)||(19355-19568)
scaffold0122 (267-327)||(23725-23785)
[»] scaffold0049 (2 HSPs)
scaffold0049 (177-390)||(20806-21019)
scaffold0049 (227-327)||(87268-87367)
[»] scaffold0692 (1 HSPs)
scaffold0692 (266-390)||(4508-4632)
[»] scaffold0184 (1 HSPs)
scaffold0184 (178-388)||(30686-30896)
[»] scaffold0103 (2 HSPs)
scaffold0103 (177-390)||(34302-34516)
scaffold0103 (13-46)||(34147-34180)
[»] scaffold0078 (3 HSPs)
scaffold0078 (178-388)||(41948-42158)
scaffold0078 (177-388)||(36511-36719)
scaffold0078 (80-142)||(36743-36806)
[»] scaffold0417 (1 HSPs)
scaffold0417 (177-390)||(15424-15636)
[»] scaffold0012 (2 HSPs)
scaffold0012 (175-388)||(246879-247090)
scaffold0012 (223-309)||(33686-33771)
[»] scaffold0876 (2 HSPs)
scaffold0876 (181-389)||(414-621)
scaffold0876 (80-130)||(324-374)
[»] scaffold0039 (1 HSPs)
scaffold0039 (199-390)||(11922-12113)
[»] scaffold0162 (5 HSPs)
scaffold0162 (177-390)||(25849-26062)
scaffold0162 (210-390)||(12389-12567)
scaffold0162 (177-327)||(7663-7812)
scaffold0162 (313-389)||(6460-6537)
scaffold0162 (335-390)||(7625-7681)
[»] scaffold0234 (1 HSPs)
scaffold0234 (177-390)||(16815-17026)
[»] scaffold0031 (3 HSPs)
scaffold0031 (84-390)||(71167-71475)
scaffold0031 (131-347)||(31648-31865)
scaffold0031 (13-46)||(31529-31562)
[»] scaffold0686 (1 HSPs)
scaffold0686 (179-390)||(5282-5493)
[»] scaffold0260 (3 HSPs)
scaffold0260 (210-390)||(8997-9176)
scaffold0260 (287-390)||(10611-10715)
scaffold0260 (71-187)||(8885-9002)
[»] scaffold0158 (1 HSPs)
scaffold0158 (223-390)||(25884-26052)
[»] scaffold0132 (2 HSPs)
scaffold0132 (177-388)||(42987-43196)
scaffold0132 (177-322)||(14131-14273)
[»] scaffold0175 (2 HSPs)
scaffold0175 (177-390)||(5341-5555)
scaffold0175 (177-261)||(15507-15590)
[»] scaffold0498 (1 HSPs)
scaffold0498 (177-386)||(9496-9704)
[»] scaffold0028 (3 HSPs)
scaffold0028 (177-390)||(107220-107433)
scaffold0028 (223-386)||(88912-89076)
scaffold0028 (313-389)||(80324-80401)
[»] scaffold0032 (1 HSPs)
scaffold0032 (210-390)||(56245-56425)
[»] scaffold0465 (1 HSPs)
scaffold0465 (177-390)||(9445-9657)
[»] scaffold0597 (1 HSPs)
scaffold0597 (181-390)||(388-596)
[»] scaffold0335 (1 HSPs)
scaffold0335 (177-390)||(6633-6846)
[»] scaffold0266 (2 HSPs)
scaffold0266 (177-386)||(3020-3228)
scaffold0266 (177-388)||(1733-1945)
[»] scaffold0302 (1 HSPs)
scaffold0302 (179-390)||(12733-12943)
[»] scaffold0023 (1 HSPs)
scaffold0023 (268-390)||(92398-92519)
[»] scaffold0554 (2 HSPs)
scaffold0554 (131-343)||(2517-2729)
scaffold0554 (13-46)||(2398-2431)
[»] scaffold0413 (1 HSPs)
scaffold0413 (274-390)||(5547-5663)
[»] scaffold0160 (1 HSPs)
scaffold0160 (267-390)||(725-846)
[»] scaffold1164 (2 HSPs)
scaffold1164 (267-390)||(2088-2211)
scaffold1164 (177-235)||(2013-2071)
[»] scaffold0106 (1 HSPs)
scaffold0106 (177-390)||(48936-49151)
[»] scaffold0416 (1 HSPs)
scaffold0416 (177-368)||(6268-6458)
[»] scaffold0064 (1 HSPs)
scaffold0064 (282-389)||(63277-63385)
[»] scaffold0342 (2 HSPs)
scaffold0342 (131-390)||(12870-13131)
scaffold0342 (13-46)||(12751-12784)
[»] scaffold0364 (1 HSPs)
scaffold0364 (224-384)||(17326-17486)
[»] scaffold0610 (3 HSPs)
scaffold0610 (225-390)||(9496-9658)
scaffold0610 (165-347)||(22-203)
scaffold0610 (13-46)||(306-339)
[»] scaffold1979 (1 HSPs)
scaffold1979 (292-390)||(1-100)
[»] scaffold0240 (2 HSPs)
scaffold0240 (224-327)||(8215-8317)
scaffold0240 (5-130)||(8046-8169)
[»] scaffold0706 (1 HSPs)
scaffold0706 (223-327)||(6011-6115)
[»] scaffold0026 (1 HSPs)
scaffold0026 (267-390)||(89273-89396)
[»] scaffold0589 (1 HSPs)
scaffold0589 (267-385)||(8522-8641)
[»] scaffold0084 (1 HSPs)
scaffold0084 (210-327)||(55613-55729)
[»] scaffold0058 (3 HSPs)
scaffold0058 (267-327)||(56978-57038)
scaffold0058 (313-385)||(69725-69798)
scaffold0058 (295-348)||(73453-73507)
[»] scaffold0095 (1 HSPs)
scaffold0095 (313-390)||(33112-33190)
[»] scaffold0092 (1 HSPs)
scaffold0092 (267-388)||(4036-4158)
[»] scaffold0151 (1 HSPs)
scaffold0151 (313-389)||(21798-21875)
[»] scaffold0138 (1 HSPs)
scaffold0138 (131-389)||(21812-22072)
[»] scaffold0025 (2 HSPs)
scaffold0025 (177-327)||(149241-149389)
scaffold0025 (337-390)||(149373-149426)
[»] scaffold0387 (1 HSPs)
scaffold0387 (305-369)||(412-476)
[»] scaffold0251 (1 HSPs)
scaffold0251 (267-327)||(12871-12931)
[»] scaffold0483 (1 HSPs)
scaffold0483 (322-388)||(299-366)
[»] scaffold0109 (1 HSPs)
scaffold0109 (322-388)||(45086-45153)
[»] scaffold0643 (1 HSPs)
scaffold0643 (325-390)||(284-350)
[»] scaffold0243 (1 HSPs)
scaffold0243 (313-390)||(1749-1827)
[»] scaffold1295 (1 HSPs)
scaffold1295 (131-285)||(707-863)
[»] scaffold0808 (1 HSPs)
scaffold0808 (313-388)||(1700-1776)
[»] scaffold0141 (2 HSPs)
scaffold0141 (227-327)||(23190-23289)
scaffold0141 (227-327)||(27445-27544)
[»] scaffold0121 (1 HSPs)
scaffold0121 (227-327)||(20639-20739)
[»] scaffold0347 (1 HSPs)
scaffold0347 (295-350)||(5056-5111)
[»] scaffold0327 (1 HSPs)
scaffold0327 (131-245)||(6272-6387)
[»] scaffold0013 (1 HSPs)
scaffold0013 (336-389)||(36234-36287)


Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-176; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-176
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 20529616 - 20529239
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||    
T  20529616 aatatcttatgaaatgaaagtgtgaggaaatttcttatacgagtaggttttttttatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 20529517  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  20529516 ccaatttctattcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcaccaacggtcactaaacagta 20529417  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaat 312  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||     
T  20529416 aaatcttaattttactctagtaacttagtaaaacaactattcttactaatccacaaaagtaattctcaccaaaacttataattttacccgttctcagaaa 20529317  T
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20529316 atgaccaaaatacccctaagtccaaaatgactaaaataaccctctaacacggaaaccatgaaaatgcacccaatgatg 20529239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 6e-89
Query Start/End: Original strand, 5 - 390
Target Start/End: Original strand, 25122915 - 25123297
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| ||||||||||||| |||||| |||||||||||||| ||||| ||  |        |||||||| |||||||||| ||||||||| || ||||    
T  25122915 tctccaaaaatatcttatgaa-tgaaagggtgaggaaatttctcataagtgtt-ggtttttatatcaagtctccttaatgggtctaaccctccacttaat 25123012  T
Q  105 ggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcac 203  Q
    |||||||||| |||||| ||||||||  ||| |||||||||| |  |||| || |||| ||||||||||||| |||||||||||  | || ||| |||||    
T  25123013 ggacttaacccatttctattcacatctcaaatgtttctacactct-aacgataattcattaataacggtcaaataacggtaaaatgttactaacggtcac 25123111  T
Q  204 taaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgt 303  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||||||||||||||||||||||| |||||||    
T  25123112 taaacggtaaaatctcaattttactctagtaacttagtaaaacaactattctcactaac-cactaaagtaattctcaccaaaacttataattctacccgt 25123210  T
Q  304 tctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||| |  || ||||||||||||||||||||||| |||||||||    
T  25123211 tctcacaaaatgaccaaaatacccataagtctaaaatgactaaaatatccttcaaacacggaaaccatgaaaatgcatccaatgatg 25123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 13 - 388
Target Start/End: Original strand, 41247138 - 41247514
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||| |||| ||||||||||||||||||||| ||||| ||| |         ||||||| ||| |||||||||||||||| ||  |||||||||||    
T  41247138 aatatcttgtgaagtgaaagtgtgaggaaatttctcataagtgtatgtttttatg-tcaagtctcctcaatgggcctaaccctccactcaatggacttaa 41247236  T
Q  113 ccaatttcttttcacatc--aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    || |||||| ||||||||  |||| |||||||||| |  ||||||| ||||||||||||||||||  ||||||||||  |||| ||| ||| |||| | |    
T  41247237 cccatttctattcacatctcaaaatgtttctacactct-aacggtaattcactaataacggtcaaaaaacggtaaaatgtcactaacggtctctaagcgg 41247335  T
Q  211 taaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  41247336 taaaatcttaattttactctagtaacttagtaaaacaactattctcactaac-cactaaaagtaactctcatcaaaacttataattttacccgttctcac 41247434  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||  ||| ||||||||||||||||||||||||||||||||| |  | ||||||||||| |||||||||||||||||||||    
T  41247435 aaagtgatcaaaatacccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatga 41247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 86 - 390
Target Start/End: Original strand, 37612222 - 37612526
Alignment:
Q  86 gcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggta 184  Q
    |||||||||||||| ||||||| ||||||||||||| ||||||||  ||| |||||||||| |  | ||||| ||||||||||||||||||| |||| ||    
T  37612222 gcctaaccctcaacttaatggatttaaccaatttctattcacatctcaaatgtttctacactctaaccggtaattcactaataacggtcaat-aacgata 37612320  T
Q  185 aaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcacca 283  Q
    ||| ||||| ||| || ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||  ||| |||||||| | ||||||    
T  37612321 aaatatcaccaacggttactaaacggtaaaatcttcattttactctagtaacttagtaaaacaactattctcactaac-cactaaaagtaactttcacca 37612419  T
Q  284 aaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacc 382  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||||||||||||| |||||||||||||||    
T  37612420 aaacttaaaattt-acctgttctcacaaaatgaccaaaatacccctaagtccaaaatgaataaaatacccttctaacacggaaacccatgaaaatgcacc 37612518  T
Q  383 caatgatg 390  Q
    ||||||||    
T  37612519 caatgatg 37612526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 85 - 390
Target Start/End: Complemental strand, 22222045 - 22221739
Alignment:
Q  85 ggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggt 183  Q
    |||||||||||| || |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| || |||||||||||| || |||||||    
T  22222045 ggcctaaccctccacttaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggt-aagtaacggt 22221947  T
Q  184 aaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcacc 282  Q
    ||||  ||||  || |||||||||| ||||||||||| ||||| ||||| ||||||| |||| ||||||| | || ||| ||| ||||||||||||||||    
T  22221946 aaaatgtcactcacggtcactaaacggtaaaatcttagttttattctagcaacttagtaaaataactattttcacgaat-cactaaaagtaattctcacc 22221848  T
Q  283 aaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcac 381  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| |  ||||||||||||| ||||||||||||||    
T  22221847 aaaaattataattttatccgttctcacaaaatgaccaaaatacccttaagtccaaaacgactaaaatacccttctaacacggaaacccatgaaaatgcac 22221748  T
Q  382 ccaatgatg 390  Q
    |||||||||    
T  22221747 ccaatgatg 22221739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 85 - 390
Target Start/End: Complemental strand, 22228387 - 22228081
Alignment:
Q  85 ggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggt 183  Q
    |||||||||||| || |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| || |||||||||||| || |||||||    
T  22228387 ggcctaaccctccacttaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggt-aagtaacggt 22228289  T
Q  184 aaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcacc 282  Q
    ||||  ||||  || |||||||||| ||||||||||| ||||| ||||| ||||||| |||| ||||||| | || ||| ||| ||||||||||||||||    
T  22228288 aaaatgtcactcacggtcactaaacggtaaaatcttagttttattctagcaacttagtaaaataactattttcacgaat-cactaaaagtaattctcacc 22228190  T
Q  283 aaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcac 381  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||| |  ||||||||||||| ||||||||||||||    
T  22228189 aaaaattataattttatccgttctcacaaaatgaccaaaatacccttaagtccaaaacgactaaaatacccttctaacacggaaacccatgaaaatgcac 22228090  T
Q  382 ccaatgatg 390  Q
    |||||||||    
T  22228089 ccaatgatg 22228081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 39115912 - 39116125
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||| ||||||  |||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||| |||||||||    
T  39115912 taacagtaaaatgtcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaataactattcttactaac-cactaaaagtaat 39116010  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaa 374  Q
    || |||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| |  ||||| ||||||||| |||||    
T  39116011 tcccaccaaaaattataattttacccgttctcacaaaatgaccaatatacccctaagtccaaaa-gactaaaatacccttctaatacggaaaccaatgaa 39116109  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  39116110 aatgcacccaatgatg 39116125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 13 - 388
Target Start/End: Complemental strand, 20561394 - 20561014
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaa-cctaatggactta 111  Q
    ||||||||||||||||||||||||||||||||||| | |||| || |        ||||||||||||||||||||||||| ||||| ||||||||| |||    
T  20561394 aatatcttatgaaatgaaagtgtgaggaaatttctcacaagacta-ggtttttatatcaagtccccttaatgggcctaactctcaaacctaatggattta 20561296  T
Q  112 accaatttcttttcacatcaa--aaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaaca 209  Q
    ||| |||||| ||||  | ||  || |||||||| | |||||||||| |||||||||| |||||||  |||||||||||||||| ||| ||||||||||     
T  20561295 acccatttctattcaatttaacaaatgtttctacccacacaacggtaattcactaatatcggtcaaacaacggtaaaacatcaccaacggtcactaaacg 20561196  T
Q  210 gtaaaatcttaatt-ttactctagtaacttaggaaaacaacta-ttcttactaattcacaaaagtaattctcac-caaaacttataattttacccgttct 306  Q
    ||||||| | |||| |||||||||| || | | ||||| | |  |||  ||||| |   |||| |||||||||| ||||| |||||||| | ||||||||    
T  20561195 gtaaaatatcaattattactctagtcacctggtaaaactaatggttcacactaaatactaaaaataattctcactcaaaatttataattat-cccgttct 20561097  T
Q  307 cacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||| |||||  ||||||||||||||||||||||||||||||| |  ||||||||||||| ||||| |||||||||||||||    
T  20561096 cacaaaatgacataaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatga 20561014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 13 - 388
Target Start/End: Complemental strand, 20572956 - 20572576
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaa-cctaatggactta 111  Q
    ||||||||||||||||||||||||||||||||||| | |||| || |        ||||||||||||||||||||||||| ||||| ||||||||| |||    
T  20572956 aatatcttatgaaatgaaagtgtgaggaaatttctcacaagacta-ggtttttatatcaagtccccttaatgggcctaactctcaaacctaatggattta 20572858  T
Q  112 accaatttcttttcacatcaa--aaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaaca 209  Q
    ||| |||||| ||||  | ||  || |||||||| | |||||||||| |||||||||| |||||||  |||||||||||||||| ||| ||||||||||     
T  20572857 acccatttctattcaatttaacaaatgtttctacccacacaacggtaattcactaatatcggtcaaacaacggtaaaacatcaccaacggtcactaaacg 20572758  T
Q  210 gtaaaatcttaatt-ttactctagtaacttaggaaaacaacta-ttcttactaattcacaaaagtaattctcac-caaaacttataattttacccgttct 306  Q
    ||||||| | |||| |||||||||| || | | ||||| | |  |||  ||||| |   |||| |||||||||| ||||| |||||||| | ||||||||    
T  20572757 gtaaaatatcaattattactctagtcacctggtaaaactaatggttcacactaaatactaaaaataattctcactcaaaatttataattat-cccgttct 20572659  T
Q  307 cacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||| |||||  ||||||||||||||||||||||||||||||| |  ||||||||||||| ||||| |||||||||||||||    
T  20572658 cacaaaatgacataaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatga 20572576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 71 - 327
Target Start/End: Complemental strand, 19992766 - 19992509
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataac 169  Q
    ||||||||||| |||||||||||||| || ||||| |||||||| |||||| |||| | |||||  |||||||||| |  | ||||| ||||||||||||    
T  19992766 aagtccccttattgggcctaaccctccacttaatgtacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggtaattcactaataac 19992667  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aa 268  Q
    |||||  ||| |||||||  |||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||| ||||| |||| ||    
T  19992666 ggtcatgtaatggtaaaatgtcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaacggttctcactaa-tcactaa 19992568  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||  |||||||||||| | |||||||||||||||| ||||||| |||||||||||||||    
T  19992567 aaacaattctcaccaacaattataattttacccgtcctcacaaaatgaccaaaataccc 19992509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 20653796 - 20653418
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||||||||||||||||||| |||||||||| |||||| || |         | | ||||| | ||||||||||||||||||| ||||||||||||    
T  20653796 aatatcttatgaaatgaaagtgtgtggaaatttctcataagactaggcttttatagt-atgtcccataaatgggcctaaccctcaacttaatggacttaa 20653698  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||   ||||||| |||| |||||||||| |||||||  | ||||||||||||||| |||||||| ||||| ||||| ||| |||||||||| ||    
T  20653697 cccatttcaactcacatctaaaatgtttctacacacacaacgacaattcactaataacggttaattaacgataaaatatcaccaacagtcactaaacggt 20653598  T
Q  212 aaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||  ||||| ||||||||||||||  | ||||| ||    ||| || || |   |||| ||||||||| | |||||||| | || ||||||||||||    
T  20653597 aaaatactaattattactctagtaactcggtaaaactaatggctctcaccaaatactaaaaataattctcatc-aaacttat-agttcacccgttctcac 20653500  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||| ||||||||| |||||||    
T  20653499 aaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacctaatgatg 20653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 43373119 - 43372906
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||  ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  43373119 taacggtaaaatgtcaataacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 43373022  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| || ||||||||||||| |||||||    
T  43373021 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaataccattctaacacggaaacccatgaa 43372922  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  43372921 aatgcacccaatgatg 43372906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 199 - 390
Target Start/End: Complemental strand, 16404610 - 16404419
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt 297  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| ||||||||||| ||| |||| ||||||||||    
T  16404610 gtcactaaacggtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaattcacactaaaa-ttataatttt 16404513  T
Q  298 acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||| | ||||||| ||||||||||||||||||||| |||||||||||||||| |  ||||||||||||| ||||| |||||||||||||||||    
T  16404512 acccttcctcacaaaatgaccaaaatacccctaagtgcaaaatgactaaaatacccttctaacacggaaacccatgcaaatgcacccaatgatg 16404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 16193483 - 16193270
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||| ||    
T  16193483 taacggtaaaatatcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagttat 16193386  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||| |  | ||||||||||| |||||||    
T  16193385 tctcacccaaaattataattttacccgttctcacaaaatgaccaaaatacccttaattctaaaatgactaaaatacccttataacacggaaacccatgaa 16193286  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  16193285 aatgcacccaatgatg 16193270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 24716480 - 24716267
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| ||  |||||||||| ||||||||  ||||| ||||||||||||||   ||| ||||||||| ||||||    ||||||||||    
T  24716480 taacggtaaaatgtcactaatggtcactaaacggtaaaatcacaattt-actctagtaacttaatgaaataactattctcactaatcattaaaagtaatt 24716382  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    | |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    ||||||||||||| ||||||||    
T  24716381 cccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatactcttctaacacggaaagccatgaaa 24716282  T
Q  376 atgcacccaatgatg 390  Q
    |||||||||||||||    
T  24716281 atgcacccaatgatg 24716267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 6999942 - 6999772
Alignment:
Q  158 ttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaa-ttttactctagtaacttaggaaaacaactattctt 256  Q
    ||||||||||||||||||||||||||||||  |||| ||| |||||||||| |||||||||||| |||||||||||||||||||  |||||||||||||     
T  6999942 ttcactaataacggtcaattaacggtaaaatgtcactaacggtcactaaacggtaaaatcttaatttttactctagtaacttagtgaaacaactattctc 6999843  T
Q  257 actaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||  ||| |||||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  6999842 actaa-acactaaaagtaactctcaccacaacttacaattttacccgttctcacaaaatgaccaaaataccc 6999772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 275079 - 275292
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| | |||| ||| |||||||||    
T  275079 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcattaat-cactaaaagtaat 275176  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||||| |  |||||||| |||| |||||||    
T  275177 tcccaccaaaaattataattttacccgttctcacagaatgaccaaaatacccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaa 275276  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||| ||||||||    
T  275277 aatgcactcaatgatg 275292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 640770 - 640557
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| | |||| ||| |||||||||    
T  640770 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcattaat-cactaaaagtaat 640673  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||||| |  |||||||| |||| |||||||    
T  640672 tcccaccaaaaattataattttacccgttctcacagaatgaccaaaatacccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaa 640573  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||| ||||||||    
T  640572 aatgcactcaatgatg 640557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 826576 - 826363
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| | |||| ||| |||||||||    
T  826576 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcattaat-cactaaaagtaat 826479  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||||| |  |||||||| |||| |||||||    
T  826478 tcccaccaaaaattataattttacccgttctcacagaatgaccaaaatacccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaa 826379  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||| ||||||||    
T  826378 aatgcactcaatgatg 826363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 29760588 - 29760798
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  29760588 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 29760685  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  29760686 tcccaccaaaa-ttataattttacccattctcacaaaatgaccaaaataccactaagtctaaaatgactaaaatatccttctaacacggaaacccatgaa 29760784  T
Q  375 aatgcacccaatga 388  Q
    |||| ||| |||||    
T  29760785 aatgaacctaatga 29760798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 24385380 - 24385167
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| ||  |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  24385380 taacggtaaaatatcactaatggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 24385283  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| |||  ||||||||||||| | ||||| |  |||||||||||||| ||||||||||||||||||||||    |||| |||||||| |||||||    
T  24385282 tctcacccaaaactataattttacccatcctcaccaattgaccaaaatacccttaagtccaaaatgactaaaatactcttctagcacggaaacccatgaa 24385183  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  24385182 aatgcacccaatgatg 24385167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 24928445 - 24928235
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaat 275  Q
    |||||||||||  |||  ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| | |||  ||| || ||||||    
T  24928445 taacggtaaaatgtcaataacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcaataaa-cactaatagtaat 24928348  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |  |||| |||||||| |||||||    
T  24928347 tcccaccaaaa-ttataattttacccattctcacaaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaa 24928249  T
Q  375 aatgcacccaatga 388  Q
    |||||||| |||||    
T  24928248 aatgcaccaaatga 24928235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 74 - 390
Target Start/End: Original strand, 22981813 - 22982132
Alignment:
Q  74 tccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacgg 171  Q
    |||||||||||||||||||||| || || ||||||||||||| | | |   ||| ||| |||| |||||||||| | |||||||| || |||||||||||    
T  22981813 tccccttaatgggcctaaccctaaagcttaatggacttaacccactccaactcaaatctaaaatgtttctacacactcaacggtaatttactaataacgg 22981912  T
Q  172 tcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatttt-actctagtaacttagga-aaacaactattcttactaattcacaaa 269  Q
    ||| ||| |||||||| ||||  ||| |||||  ||| ||||||   |||||   ||||||||||||||| | ||| |||  |||| |||||   || ||    
T  22981913 tcacttatcggtaaaatatcaacaacggtcacgtaacggtaaaacactaattaccactctagtaacttagcagaaataacggttctcactaaag-actaa 22982011  T
Q  270 agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-c 368  Q
      |||| |||||||||| |||| ||||  ||||| ||||||| ||||||||||||||||||||||||||||||||||| || |  ||||||||||||| |    
T  22982012 gataatcctcaccaaaatttatcatttc-cccgtactcacaaaatgaccaaaatacccctaagtccaaaatgactaaattacctttctaacacggaaacc 22982110  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    |||||||||||||| |||||||    
T  22982111 catgaaaatgcaccaaatgatg 22982132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 21681728 - 21681831
Alignment:
Q  275 ttctcaccaaaac-ttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatg 372  Q
    ||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |  ||||||||||||| |||||    
T  21681728 ttctcaccaaaactttataa-tttacccgttctcacaaaatgacaaaaatacccctaagtccaaaatgactaaattacccttctaacacggaaacccatg 21681826  T
Q  373 aaaat 377  Q
    |||||    
T  21681827 aaaat 21681831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 25296879 - 25297002
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    ||||||| |||||||||||| |||| | ||||| | | | | ||| |||| ||||||||||||||||| |||||||||||| || |  ||||||||| ||    
T  25296879 aaaagtagttctcaccaaaagttattaatttactcttacacccaaaatgatcaaaatacccctaagtctaaaatgactaaattacccttctaacacgaaa 25296978  T
Q  367 a-ccatgaaaatgcacccaatgat 389  Q
    | ||||||||||||||||||||||    
T  25296979 acccatgaaaatgcacccaatgat 25297002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 25758899 - 25759022
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    ||||||| |||||||||||| |||| | ||||| | | | | ||| |||| ||||||||||||||||| |||||||||||| || |  ||||||||| ||    
T  25758899 aaaagtagttctcaccaaaagttattaatttactcttacacccaaaatgatcaaaatacccctaagtctaaaatgactaaattacccttctaacacgaaa 25758998  T
Q  367 a-ccatgaaaatgcacccaatgat 389  Q
    | ||||||||||||||||||||||    
T  25758999 acccatgaaaatgcacccaatgat 25759022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 41248150 - 41248079
Alignment:
Q  318 caaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||||||||||||||||||||||||||||||| |  | ||||||||||| |||||||||||||||||||||    
T  41248150 caaaatacccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatga 41248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 271 - 387
Target Start/End: Complemental strand, 21259041 - 21258924
Alignment:
Q  271 gtaattctcaccaaaactta-taattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa-ac 368  Q
    |||||||||||||||| ||| ||||||| ||| | ||| | | |||| ||||||||||||||||||||||||||||||  |||  ||||||||| ||  |    
T  21259041 gtaattctcaccaaaagttactaatttt-cccatactcgcgaaatgatcaaaatacccctaagtccaaaatgactaaatcaaccttctaacacgaaagcc 21258943  T
Q  369 catgaaaatgcacccaatg 387  Q
    |||||||||||||||||||    
T  21258942 catgaaaatgcacccaatg 21258924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 390
Target Start/End: Original strand, 38534253 - 38534514
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| | ||||| ||  | |||||||||||||| ||||| |||||| |  || |||||||||| ||| |||||||  ||||   |||||    
T  38534253 aaaatgtttctacacactcaacgataaattactaataacggtcacttaacagtaaaatactaccaactgtcacttaacggtaaaatactaatcactactc 38534352  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    ||||||||||| |||| |||  |||| |||||  ||| |||| ||||||||||||||| | |  | ||||| | | | |  || ||| |||||||||||     
T  38534353 tagtaacttagtaaaataacggttctcactaaa-cactaaaaataattctcaccaaaattgactaatttactcttacaccaaaaatggccaaaataccca 38534451  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    | ||||||||||||||||| || |  ||||||| ||||| ||||||||||||| |||||||||    
T  38534452 tgagtccaaaatgactaaattacccttctaacatggaaatccatgaaaatgcatccaatgatg 38534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 22735396 - 22735271
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaa-atgactaaaataacactctaacacgga 365  Q
    |||||||||||||||||||| |||  | ||||| | | | || || ||||||||||||||||| |||||||| |||| |||| || |  |||||||||||    
T  22735396 aaaagtaattctcaccaaaagttactaatttactcttacacataaaatgaccaaaatacccctgagtccaaagatgattaaattacccttctaacacgga 22735297  T
Q  366 aa-ccatgaaaatgcacccaatgatg 390  Q
    || ||||||||||||||| |||||||    
T  22735296 aacccatgaaaatgcacctaatgatg 22735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 267 - 327
Target Start/End: Original strand, 7783628 - 7783688
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| || ||||||||||||    
T  7783628 aaaagtaattctcacccaaaactataattttacccgttctcacaaaattaccaaaataccc 7783688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 33610531 - 33610436
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgat 389  Q
    ||||||| | ||| ||| ||||||||||||||| | ||||||||||||||||| || |  ||||||||| |||| ||| |||||||||||||||||    
T  33610531 tttacccttactcgcaaaatgaccaaaatacccatgagtccaaaatgactaaattacccttctaacacgaaaacacattaaaatgcacccaatgat 33610436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 23158925 - 23159019
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgat 389  Q
    ||||||| | ||| ||| |||||||| ||||||||||||| |||||||||||| || |  ||||||||| |||||   |||||||||||||||||    
T  23158925 tttacccttactcgcaaaatgaccaatatacccctaagtctaaaatgactaaattacccttctaacacgaaaacccataaaatgcacccaatgat 23159019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 39446228 - 39446150
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |   |||||||||||| || ||||||||||||||| ||||    
T  39446228 atgaccaaaatacccctgagtccaaaatgactaaattaccctactaacacggaaatccttgaaaatgcacccaaggatg 39446150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 9950597 - 9950536
Alignment:
Q  330 aagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||||||| ||||||||||||    
T  9950597 aagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatacacccaatgatg 9950536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 31193808 - 31193731
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||| | ||| ||||||||||||| || || ||||| ||| ||| ||||||||||||||||||||||    
T  31193808 atgaccaaaatacccttgagttcaaaatgactaaattaccattctaatacgaaaacccatgaaaatgcacccaatgat 31193731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 27232595 - 27232543
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||||||| | ||||||| ||||||||||||||||| |||||||||||||||||    
T  27232595 tttacccttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaa 27232543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 5238737 - 5238836
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  5238737 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 5238835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20482085 - 20482128
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  20482085 aatatcttatgaa-tgaaagtgtgtggaaatttcttataagagta 20482128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 21681606 - 21681722
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| |||||||| |   |||||||||||||||| ||||  ||||| ||||| ||| |  ||||||| ||||||| | ||||| |||||    
T  21681606 aaaatgtttctacacacacaacggcaaaccactaataacggtcaaataactataaaatatcaccaacggctactaaacggtaaaatataaatttatactc 21681705  T
Q  230 tagtaacttaggaaaac 246  Q
    |||||| |||| |||||    
T  21681706 tagtaatttagtaaaac 21681722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 23151325 - 23151273
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||||||| | ||||| | ||||||||||||||||| |||||||||||||||||    
T  23151325 tttacccttgctcactaaatgaccaaaatacccctgagtccaaaatgactaaa 23151273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 25710568 - 25710492
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    |||||||||||||||||| ||| |||||||||||  || |  ||||| ||| ||| |||||||||||||||||||||    
T  25710568 atgaccaaaatacccctatgtctaaaatgactaatttacccttctaatacgaaaacccatgaaaatgcacccaatga 25710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 25281719 - 25281774
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||||||| |||| |||||||||||| |||| |||||||||||||||    
T  25281719 tttacccttgctcacaaaatgatcaaaatacccctgagtctaaaatgactaaaata 25281774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 29307186 - 29307281
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgat 389  Q
    ||||||| | ||| ||| ||||||||||||||| | ||||||||||||||||| ||    ||||||||| |||| ||| || ||||||||||||||    
T  29307186 tttacccttactcccaaaatgaccaaaatacccttgagtccaaaatgactaaattactcttctaacacgaaaactcattaagatgcacccaatgat 29307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 6999790 - 6999736
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatga 388  Q
    ||||||||| |||||| |  ||||||||||||||| |||||||||||||||||||    
T  6999790 caaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 6999736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 19992527 - 19992473
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatga 388  Q
    ||||||||| |||||| |  ||||||||||||||| |||||||||||||||||||    
T  19992527 caaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 19992473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 33529193 - 33529227
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||||||||||||||||| |||||||||||||||||    
T  33529193 atgaccaaaatacccctgagtccaaaatgactaaa 33529227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 20496335 - 20496298
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||||||||||||||| || |||||||||||||||    
T  20496335 atgaccaaaatacccctaaatctaaaatgactaaaata 20496298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 21681488 - 21681521
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||||||| |||||||||||||||||||||    
T  21681488 aatatcttatgagatgaaagtgtgaggaaatttc 21681521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 31628672 - 31629049
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||||||||||||||||||||| |||||||| |||||||||          |||||||||||||||||||||||||||||||| ||||||||||||    
T  31628672 aatatcttatgaaatgaaagtgtgagaaaatttctcataagagtat-atttttatatcaagtccccttaatgggcctaaccctcaacttaatggacttaa 31628770  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    || |||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||  |||| ||| |||||||||| |||    
T  31628771 cccatttctattcacatcaaaatgtttctacacgtacaacggtatttcactaataacggtcaaataacggtaaaatgtcaccaacggtcactaaacggta 31628870  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||||||||||| ||||||||||||| ||||||||  |||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  31628871 aaatcttaattttattctagtaacttagtaaaacaacggttctcactaa-tcactaaaagtaattctcaccaaaacctataattttacccgttctcacaa 31628969  T
Q  312 tatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||| ||||||||||||||| |  |  |||||||||| |||||||||||||||||||||||    
T  31628970 aatgaccaaaatacccctaagtctaaaatgactaaaataccctttcaacacggaaacccatgaaaatgcacccaatgatg 31629049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 83 - 390
Target Start/End: Original strand, 18777682 - 18777990
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||  |||||||||||||||||||||| || | |||||||    
T  18777682 tgggcctaaccctcaacttaatggacttaacccatttctattcacatcaaaatgtttctacacatacaacggtatttcactaataacagttatttaacgg 18777781  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcac 281  Q
    |||||  |||| ||| |||||||||| ||||||||||||||||||||||||| ||||| ||||||||  |||| ||||| |||| |||||||||||||||    
T  18777782 taaaatgtcaccaacggtcactaaacggtaaaatcttaattttactctagtatcttagtaaaacaacggttctcactaa-tcactaaaagtaattctcac 18777880  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgca 380  Q
    |||||| ||||||||||||||||||||||| |||| || ||||||||||||| |||||||||||||||| |  || |||||||||| |||||||||||||    
T  18777881 caaaacctataattttacccgttctcacaaaatgaacagaatacccctaagttcaaaatgactaaaatacccttccaacacggaaatccatgaaaatgca 18777980  T
Q  381 cccaatgatg 390  Q
    ||||||||||    
T  18777981 cccaatgatg 18777990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 5 - 389
Target Start/End: Original strand, 18433117 - 18433489
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||| |        | |||||| |||||||||| ||||||||| || ||||    
T  18433117 tctccaaaaatatcttatgaa-tgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtctccttaatgggtctaaccctccacttaat 18433214  T
Q  105 ggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcac 203  Q
    |||||||||  |||||| ||||||||  ||| |||||||||| |  | ||||| |||||||||||||||           |||| ||||||||| |||||    
T  18433215 ggacttaactcatttctattcacatctcaaatgtttctacactctaaccggtaattcactaataacggt-----------aaaatatcacaaacggtcac 18433303  T
Q  204 taaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccg 302  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||| |||||||||||||||||||||||||||    
T  18433304 taaacggtaaaatcttaattttactctagtaacttagtaaaacaactattctcactaac-cactaaaagtaactctcaccaaaacttataattttacccg 18433402  T
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgat 389  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||    
T  18433403 ttctcacaaaatgatcaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaaccatgagaatgcacccaatgat 18433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 25633430 - 25633122
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    |||||||||||||| || ||| |||||||||  |||||| ||||||||  ||| |||||||||| |  | ||||| |||||||||||||||||| |||||    
T  25633430 tgggcctaaccctccacttaacggacttaactcatttctattcacatcttaaatgtttctacactctaaccggtaattcactaataacggtcaaataacg 25633331  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||  ||||| |||| ||||||||||||||    
T  25633330 gtaaaatgtcactaatggtcactaaacagtaaaatcttaattttactctagtaacttagtaaaacaacggttcccactaa-tcactaaaagtaattctca 25633232  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  25633231 ccaaaacttataa-tttatccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgc 25633133  T
Q  380 acccaatgatg 390  Q
    |||||||||||    
T  25633132 acccaatgatg 25633122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 25744183 - 25743876
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    ||||||||||||||||| |||||||| ||| | |||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||| |||    
T  25744183 tgggcctaaccctcaacttaatggacgtaatccatttctattcacatcaaaatgtttctacacaaacaacggtatttcactaataacggttaattatcgg 25744084  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcac 281  Q
    || ||  |||| ||| |||||||||||||||| ||||| ||||||||||||||||| | |||| |||| |||| ||||| |||| ||||||||||| |||    
T  25744083 tataatgtcactaacggtcactaaacagtaaagtcttagttttactctagtaacttcgtaaaataactcttctcactaa-tcactaaaagtaattcccac 25743985  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgca 380  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||| |  ||||| ||||||| |||||||||||||    
T  25743984 caaaa-ttataattttacccgttctcacaaaatgaccaaaatacacttaaatccaaaatgactaaaatacccttctaatacggaaacccatgaaaatgca 25743886  T
Q  381 cccaatgatg 390  Q
    ||||||||||    
T  25743885 cccaatgatg 25743876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 76 - 390
Target Start/End: Original strand, 18570826 - 18571144
Alignment:
Q  76 cccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtc 173  Q
    ||||||||||||||||  ||||| || ||||||||||||| |||||| ||||||||  ||| |||||||||| |  |  |||| ||||||||||||||||    
T  18570826 cccttaatgggcctaattctcaaacttaatggacttaacccatttctattcacatctcaaatgtttctacactctaacaggtaattcactaataacggtc 18570925  T
Q  174 aattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagt 272  Q
    || |||||||||||  |||| ||| |||||||||| ||||||||||| ||||||||| | ||||||| |||| ||||||||| |||||| ||| ||||||    
T  18570926 aagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactcttgcaacttagtaaaataactattctcactaat-cactaaaagt 18571024  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgact-aaaataacactctaacacggaaa-cca 370  Q
    ||||||||||| |||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||||| |||||| |  || |||||||||| |||    
T  18571025 aattctcaccacaactaataattttaccagttctcataaaatgaccaaaatacccctaagtccaaaatgactaaaaatacccttccaacacggaaaccca 18571124  T
Q  371 tgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||    
T  18571125 tgaaaatgcacccaatgatg 18571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 18399422 - 18399803
Alignment:
Q  13 aatatcttatgaaa-tgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggactta 111  Q
    |||||||||||||| ||||||||||||||||||||| |||||| || |        |||||||||||||||||||||||||||||||| |||| ||||||    
T  18399422 aatatcttatgaaaatgaaagtgtgaggaaatttctcataagacta-ggtttttatatcaagtccccttaatgggcctaaccctcaacttaatagactta 18399520  T
Q  112 accaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| |||| |||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||| |    
T  18399521 acccatttctattcaaatcaaaaatgtttctatacacacaacggtatttcactaataacggtcaattaacggtaaaatatcaccaatggtcactaaacgg 18399620  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattctca-ccaaaacttataattttacccgttctc 307  Q
    ||||||  ||||| ||||||||||||||  | ||||| ||    |||  | || |   |||| ||||||||| |||||| |||||||||| |||||||||    
T  18399621 taaaatactaattattactctagtaactcggtaaaactaatggctctcgccaaatactaaaaataattctcacccaaaatttataatttt-cccgttctc 18399719  T
Q  308 acaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |  ||||||||||||| || ||||||||| | ||||||||    
T  18399720 acaaaatgacaaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccgtgaaaatgctctcaatgatg 18399803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 87 - 390
Target Start/End: Original strand, 22441488 - 22441793
Alignment:
Q  87 cctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaa 185  Q
    ||||||||||||| |||||||||||||| |||||| |||| | |||||  |||||||||| |  | | ||| |||||||||||||||||| |||||||||    
T  22441488 cctaaccctcaacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaacctgtaattcactaataacggtcaagtaacggtaa 22441587  T
Q  186 aacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaa 284  Q
    ||  |||| ||| |||| ||||| |||||||||||||| |||||||||||||||| ||||||||  |||| ||||| |||| ||||||||||||||| ||    
T  22441588 aatgtcactaacggtcattaaacggtaaaatcttaattctactctagtaacttagtaaaacaacggttctcactaa-tcactaaaagtaattctcacaaa 22441686  T
Q  285 aacttata-attttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacc 382  Q
    ||   ||| |  |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |  ||||||||||||| ||||| |||||||||    
T  22441687 aaaaaatataagttacccgttctcacaaaatgaccaaattacccctaagtccaaaatgactaaaatacccttctaacacggaaatccatg-aaatgcacc 22441785  T
Q  383 caatgatg 390  Q
    ||||||||    
T  22441786 caatgatg 22441793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 89 - 390
Target Start/End: Original strand, 32899349 - 32899651
Alignment:
Q  89 taaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    ||||||||||| |||| ||||||||| |||||| |||| |||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  32899349 taaccctcaacttaatagacttaacccatttctattcaaatcacaaatgtttccacacacacaacggtatttcactaataacggtcaattaacggtaaaa 32899448  T
Q  188 catcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattctt--actaattcacaaaagtaattctcaccaa 284  Q
    |||||| ||| ||||||||||  |||||| | |||| ||||||| || |||  | ||||| | |   |||  || |||  || ||| |||||| | || |    
T  32899449 catcaccaacggtcactaaacgctaaaatatcaattattactctggtcactcggtaaaactaatggccttcaacaaat--actaaaataattcccgcc-a 32899545  T
Q  285 aacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcaccca 384  Q
     |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||||| ||||||| |    
T  32899546 tacttttaattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacaatgaagatgcaccaa 32899645  T
Q  385 atgatg 390  Q
    ||||||    
T  32899646 atgatg 32899651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 18583954 - 18584167
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||  |||||||||  ||||||||| || | |||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  18583954 taacggtaaaatgtcaccaatggtcactaaatggtaaaatctcaactatactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 18584052  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaa 374  Q
    || |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||| |||| |||||||    
T  18584053 tcccaccaaaaat-ataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgggaacccatgaa 18584151  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  18584152 aatgcacccaatgatg 18584167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 35009073 - 35008860
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaa-gtaat 275  Q
    |||||||||||  |||| ||| ||| |||||| ||||||||| || |||||||||||| ||||| |||| ||||||||| |||||| ||||||| |||||    
T  35009073 taacggtaaaatgtcactaacggtctctaaacggtaaaatctcaactttactctagtagcttagtaaaataactattctcactaat-cacaaaaagtaat 35008975  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  35008974 tcccaccaaaa-ttataattctacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 35008876  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  35008875 aatgcacccaatgatg 35008860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 13 - 261
Target Start/End: Original strand, 16106999 - 16107246
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |        |||||||||| |||||||||||||| ||||| || ||||||||||    
T  16106999 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagagta-ggtttttatatcaagtccctttaatgggcctaactctcaaacttaatggactta 16107096  T
Q  112 accaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    ||| |||||| |||| ||||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||| ||| |||||||||| ||    
T  16107097 acccatttctattcaaatcaaaatgtttctac-cccacaacggtatttcactaataatggtcaa-taacggtaaaatatcaccaacggtcactaaacggt 16107194  T
Q  212 aaaatcttaat--tttactctagtaacttaggaaaacaactattcttactaa 261  Q
    |||||| || |  |||||||||||||||||| ||||| || ||||| |||||    
T  16107195 aaaatcctagttatttactctagtaacttagtaaaaccacgattctcactaa 16107246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 16086500 - 16086726
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |        ||||||||||||||||||||||||| ||||| || ||||||||||    
T  16086500 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagagtatgtttttat-atcaagtccccttaatgggcctaactctcaaacttaatggactta 16086597  T
Q  112 accaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    ||| |||||| |||| ||||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||  ||| |||||||||||||    
T  16086598 acccatttctattcaaatcaaaatgtttctac-cccacaacggtatttcactaataatggtcaa-taacggtaaaatatcatcaacggtcactaaacagt 16086695  T
Q  212 aaaatcttaat--tttactctagtaacttag 240  Q
    |||||| || |  ||||||||||||||||||    
T  16086696 aaaatcctagttatttactctagtaacttag 16086726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 198 - 387
Target Start/End: Original strand, 23148634 - 23148821
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattt 296  Q
    ||||||||||| ||||||||  ||||| ||||||||||||||| |||| ||||||||| |||||| ||| ||||||||||| |||||||| |||||||||    
T  23148634 tgtcactaaacggtaaaatcccaattt-actctagtaacttagtaaaataactattctcactaat-cactaaaagtaattcccaccaaaa-ttataattt 23148730  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatg 387  Q
    || |||||||||||| ||||||||||||||||||| || ||||||||||||||| |  |||||||||||| |||||||| |||||||||||    
T  23148731 tatccgttctcacaaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaacacggaacccatgaaagtgcacccaatg 23148821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 190 - 390
Target Start/End: Complemental strand, 13014309 - 13014108
Alignment:
Q  190 tcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaattctcaccaaaact 288  Q
    |||| ||| |||||||||  ||||||||||| |||||| |||||||||||| |||| ||||||||| |||||  ||| || ||||| |||| ||||||||    
T  13014309 tcactaacggtcactaaatggtaaaatcttagttttaccctagtaacttagtaaaataactattctcactaac-cactaagagtaactctcgccaaaact 13014211  T
Q  289 tataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatg 387  Q
    |||||||||| | || || |||| |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||    
T  13014210 tataattttatctgtccttacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacatggaaacccatgaaaatgcacccaatg 13014111  T
Q  388 atg 390  Q
    |||    
T  13014110 atg 13014108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 13620435 - 13620223
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  13620435 taacggtaaaatgtcaccaacagtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 13620338  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||| | | || ||||||||||||||||||| ||||||||||||||| |  | ||||||||||| |||||||    
T  13620337 tcccaccaaaa-ttataattttacccgttctctccaaattaccaaaatacccctaagtctaaaatgactaaaatacccttttaacacggaaacccatgaa 13620239  T
Q  375 aatgcacccaatgatg 390  Q
    |||| |||||||||||    
T  13620238 aatgtacccaatgatg 13620223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 19982910 - 19982699
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  19982910 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 19982813  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| | |||| |||| |||||||||| |  ||||||||||||| |||||||    
T  19982812 tcccaccaaaa-ttataattttacccgttctcacaa-atgaccaaaatacccttgagtctaaaacgactaaaatacccttctaacacggaaacccatgaa 19982715  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||| ||||||||    
T  19982714 aatgcactcaatgatg 19982699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 35014774 - 35014562
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||| ||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  35014774 taacggtaaaatgtcactaacggtcaataaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 35014677  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| ||||||||||||| |||||| ||| ||||||||||||||| |||||| ||||||||||||||| |  |||||||| |||| |||||||    
T  35014676 tcccactaaaa-ttataattttacctgttctcgcaaaatgaccaaaatacccataagtctaaaatgactaaaatacccttctaacacagaaacccatgaa 35014578  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  35014577 aatgcacccaatgatg 35014562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 14128288 - 14128161
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt 297  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||| ||||||| ||||||||||||||||    
T  14128288 gtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaactattctcactaa-ccactaaaagtcattctcaacaaaacttataatttt 14128190  T
Q  298 acccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||| | |||||||||||||    
T  14128189 acccgttctcacaa-aagaccaaaataccc 14128161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 18002037 - 18001913
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| ||||| ||||||||||||||| |  ||||||||||||    
T  18002037 aaaaataattctcaccaaaaattataattttacccgttctcaccaaatgaccaaaatacccccaagtctaaaatgactaaaatacccttctaacacggaa 18001938  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | ||||||||||| | |||||||||    
T  18001937 atccatgaaaatgtatccaatgatg 18001913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 29666481 - 29666624
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctc 279  Q
    ||||||| ||||| |||  ||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||| |    
T  29666481 ggtaaaatatcactaacgatcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattccc 29666578  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29666579 accaaaact-ataattttacccgttctcacaa-atgaccaaaataccc 29666624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 224 - 347
Target Start/End: Original strand, 22868072 - 22868194
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||||||||||||| |||| |||  |||  ||||| |   |||| ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||    
T  22868072 ttactctagtaacttagcaaaataacggttcccactaaatactaaaaataattctcaccaaaatttataattt-acccgttctcccaaaatgaccaaaat 22868170  T
Q  324 acccctaagtccaaaatgactaaa 347  Q
    || ||||||||||||| |||||||    
T  22868171 acgcctaagtccaaaaagactaaa 22868194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 16086737 - 16086825
Alignment:
Q  302 gttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||| | ||||||||||||||||||||| | |||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  16086737 gttctcactaaatgaccaaaatacccctaagttc-aaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 16086825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 27752158 - 27752274
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| |||||||||||||  |||||||||| |||||||||||| | |||| |||||||||||||| |||||||||||||||||| || ||||| ||| ||    
T  27752158 aaaaataattctcaccaa--cttataattt-acccgttctcaccaaatgatcaaaatacccctaaatccaaaatgactaaaataccattctaatacgaaa 27752254  T
Q  367 ac-catgaaaatgcacccaa 385  Q
    || ||  |||||||||||||    
T  27752255 actcaataaaatgcacccaa 27752274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 316 - 390
Target Start/End: Original strand, 15863208 - 15863283
Alignment:
Q  316 accaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||| || |||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  15863208 accaaaatacccctacgttcaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 15863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 21410535 - 21410457
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||||||| |||| ||||||||||||||||||    
T  21410535 atgaccaaaatacccctgagtccaaaatgactaaattatccttctaacacggaaacccataaaaatgcacccaatgatg 21410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 15079230 - 15079154
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    |||||||||||||||||| |||||||||||||||| || |  || |||||||||| |||||||||||||||||||||    
T  15079230 atgaccaaaatacccctacgtccaaaatgactaaattacccttcaaacacggaaacccatgaaaatgcacccaatga 15079154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 267 - 388
Target Start/End: Complemental strand, 35135542 - 35135420
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||    ||||| | | | | ||| ||||||||||||||||||| ||||||||||||| | || |  ||||||||| ||    
T  35135542 aaaagtaattctcaccaaaagttactgatttactcttacactcaaaatgaccaaaatacccctaattccaaaatgactatattacccttctaacacgaaa 35135443  T
Q  367 a-ccatgaaaatgcacccaatga 388  Q
    | |||||||||||||||||||||    
T  35135442 acccatgaaaatgcacccaatga 35135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 389
Target Start/End: Complemental strand, 18629116 - 18628993
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| |||| |||||||||| |||  | ||||||| | ||| ||| |||||||||||||| || ||||||||||||||||| || |  ||||| ||| ||    
T  18629116 aaaaataatcctcaccaaaaattactaatttacccttactcgcaaaatgaccaaaatacctctgagtccaaaatgactaaattacccttctaatacgaaa 18629017  T
Q  367 a-ccatgaaaatgcacccaatgat 389  Q
    | |||| |||||||||||||||||    
T  18629016 acccattaaaatgcacccaatgat 18628993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 25654902 - 25654975
Alignment:
Q  316 accaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgat 389  Q
    |||||||||||||| ||||||||||||||||| || |  ||||||||| ||||| | ||||| |||||||||||    
T  25654902 accaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaacccttaaaatacacccaatgat 25654975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 18086437 - 18086337
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||||| ||||||| || |||||||||||    
T  18086437 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccgtcctcacaaaattaccaaaatacc 18086338  T
Q  327 c 327  Q
    |    
T  18086337 c 18086337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18777613 - 18777657
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  18777613 aatatcttatggaatgaaagtgtgaggaaatttctcataagagta 18777657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 14672160 - 14672215
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    |||||||||||||| || ||||||||||||||||| |||  |||||||||||||||    
T  14672160 tttacccgttctcagaaaatgaccaaaatacccctgagtttaaaatgactaaaata 14672215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 25366891 - 25366829
Alignment:
Q  130 caaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatca 192  Q
    ||||| |||||||||| ||||||||||  | |||||||||||||| |||||||||||| ||||    
T  25366891 caaaatgtttctacacacacaacggtaaattactaataacggtcacttaacggtaaaatatca 25366829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 18570764 - 18570797
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  18570764 aatatcttatgaaatgaaagtgtgaggaaatttc 18570797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 1649681 - 1649621
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||||||| ||| |||| |||||||||||||| | ||||||| || ||||||||||||    
T  1649681 aaaagtaattcccactaaaaattataattttacccatcctcacaaaattaccaaaataccc 1649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 16107237 - 16107324
Alignment:
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||| | ||||||||||||||||||||| | |||||| |||||||    ||||||||| ||| ||||||||||||||| |||||||    
T  16107237 ttctcactaaatgaccaaaatacccctaagttc-aaatgattaaaatactcttctaacacgtaaacccatgaaaatgcaccaaatgatg 16107324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 32899274 - 32899313
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataa 52  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  32899274 aatatcttatgaagtgaaagtgtgaggaaatttctcataa 32899313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 17082703 - 17082586
Alignment:
Q  272 taattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-cca 370  Q
    |||| |||||||||| |||  | ||||||| | ||| ||| ||||||||||||||||| |||||||| | |||||| || |  ||||||||| |||  |     
T  17082703 taatcctcaccaaaaattaccaatttacccttactcgcaaaatgaccaaaataccccttagtccaaactaactaaattacccttctaacacgaaaagtcg 17082604  T
Q  371 tgaaaatgcacccaatga 388  Q
    | ||||||||||||||||    
T  17082603 ttaaaatgcacccaatga 17082586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 70 - 390
Target Start/End: Complemental strand, 22402817 - 22402496
Alignment:
Q  70 caagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataa 168  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| |||| |||||||||| |  | ||||| |||||||||||    
T  22402817 caagtccccttaatgggcctaaccctcaacttaatggactcaacccatttctattcacatctaaaatgtttctacactctaaccggtaattcactaataa 22402718  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaa 268  Q
    ||||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    ||    
T  22402717 cggtcaaataacggtaaaatatcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaactatttttactaatctttaa 22402618  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac 368  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||    
T  22402617 aagtaattctcaccaaaacttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaataactaaaatacccttctaacacggaaac 22402518  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    ||||| ||||||||||||||||    
T  22402517 catgagaatgcacccaatgatg 22402496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 95 - 390
Target Start/End: Original strand, 35055313 - 35055609
Alignment:
Q  95 tcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcaca 194  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||||||| || ||||||||||||||  ||||     
T  35055313 tcaacttaatggacttaacccatttcttttcacatcaaaatgtttctacacatacaacggtatttcactaataacagttaattaacggtaaaatgtcacc 35055412  T
Q  195 aactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataa 293  Q
    ||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||  |||| ||||| |||| |||| |||||||||||||||| |||||    
T  35055413 aacggtcactaaacggtaaaatcttaattttactctagtaactttgtaaaacaacggttctcactaa-tcactaaaattaattctcaccaaaacctataa 35055511  T
Q  294 ttttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |  || |||||| ||| |||||||||| ||||||||||||    
T  35055512 ttttacccgttctcacaaaatgaccaaaatacccataagtccaaaatgactaaaatacccttccaacacgaaaacccatgaaaatacacccaatgatg 35055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 87 - 390
Target Start/End: Original strand, 41212575 - 41212878
Alignment:
Q  87 cctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaa 185  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| || |||||||||||| || |||||||||    
T  41212575 cctaaccctcaacttaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggtgaagtaacggtaa 41212674  T
Q  186 aacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaa 284  Q
    ||  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| ||||||||||||||| ||    
T  41212675 aatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaattctcac-aa 41212772  T
Q  285 aacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcaccca 384  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |  |||||||||||| ||||||||||||| |||    
T  41212773 aacttacaattttacccgttctcacaaaatgaccaaaatacccctaagtttaaaatgactaaaatacccttctaacacggaacccatgaaaatgcatcca 41212872  T
Q  385 atgatg 390  Q
    ||||||    
T  41212873 atgatg 41212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 71 - 390
Target Start/End: Complemental strand, 35522057 - 35521731
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggta-----tttcacta 164  Q
    |||||||||||||||||||||| ||||| || ||||||||||||  |||||| |||| ||||||| |||||||||| || || ||||     ||| ||||    
T  35522057 aagtccccttaatgggcctaactctcaaacttaatggacttaactcatttctattcaaatcaaaatgtttctacacacagaatggtacgatatttaacta 35521958  T
Q  165 ataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaatt 263  Q
    ||||||||||| ||||||||||||||||| ||| ||| |||||  ||||||| | |||| ||||||||||||||||| ||||||||  |||| ||||||     
T  35521957 ataacggtcaaataacggtaaaacatcaccaacggtctctaaatggtaaaatatcaattattactctagtaacttagtaaaacaacggttctcactaat- 35521859  T
Q  264 cac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac 362  Q
    ||| ||||||||||||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||    
T  35521858 cactaaaagtaattctcaccacaacttataattt-acccgttctcacaaaaagaccaaaatacccctaagtccaaaatgactaaaataccattctaacac 35521760  T
Q  363 ggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||| |||||||||||||||||||||||    
T  35521759 ggaaacccatgaaaatgcacccaatgatg 35521731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 21718711 - 21719092
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacc-taatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||| | |        ||||||||||||||||||||||||| || |||| ||||||| |||    
T  21718711 aatatcttatgaaatgaaagtgtgaggaaatttcctctaagagaa-ggtttttatatcaagtccccttaatgggcctaactctgaaccctaatggattta 21718809  T
Q  112 accaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| |||| |||||||  ||||||||   |||| ||||| ||||||||||||||||||  |||||||||||||||| ||| |||||||||| |    
T  21718810 acccatttctattcaaatcaaaaatgtttctacctacacagcggtaattcactaataacggtcaaacaacggtaaaacatcaccaacggtcactaaacgg 21718909  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattctcacc-aaaacttataattttacccgttctc 307  Q
    |||||| | |||| ||||| |||||||   | ||||| |||  |||  ||||  |   |||| ||||||||||| ||||||||||| ||| |||||||||    
T  21718910 taaaatatcaattattactttagtaacccggtaaaactaacggttcacactatatactaaaaataattctcacccaaaacttataagttt-cccgttctc 21719008  T
Q  308 acaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || | |||||||||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  21719009 accaaatgaccaaaatacccccaagtccaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaatgatg 21719092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 13103769 - 13103980
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  13103769 taacggtaaaatgtcactaacggtcactaaaccgtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 13103867  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||    
T  13103868 tcccactaaaa-ttataattttacccgttctcataaaatgaccaaaatacccctaagtctaaaatgactaaaataccattctaacacggaaacccatgaa 13103966  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  13103967 aatgcacccaatga 13103980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 180 - 390
Target Start/End: Complemental strand, 20887444 - 20887234
Alignment:
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||||  |||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||||     
T  20887444 cggtaaaatgtcactaacggtcactaaacagtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaattcc 20887346  T
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaat 377  Q
    |||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||| |  ||||||||||||| ||||||||||    
T  20887345 caccaaaa-ttataattttatccgttctcacaaaatgactaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaat 20887247  T
Q  378 gcacccaatgatg 390  Q
    |||||||||||||    
T  20887246 gcacccaatgatg 20887234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 167 - 385
Target Start/End: Original strand, 44320257 - 44320475
Alignment:
Q  167 aacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac 266  Q
    ||||||||| |||||||||||  | || ||| |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||| ||||    
T  44320257 aacggtcaagtaacggtaaaatgttactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaa-tcac 44320355  T
Q  267 -aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgga 365  Q
     ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    |||||||||||    
T  44320356 taaaagtaattctcaccaaaacttataa-tttacccgttctcacaaaatgaccgaaatacccctaagttcaaaatgactaaaatactcttctaacacgga 44320454  T
Q  366 aa-ccatgaaaatgcacccaa 385  Q
    || ||||||||||||||||||    
T  44320455 aacccatgaaaatgcacccaa 44320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 20446296 - 20446509
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||  |||||| ||| |||||||||    
T  20446296 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattcccactaat-cactaaaagtaat 20446393  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  20446394 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaa 20446493  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  20446494 aatgcacccaatgatg 20446509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 21860647 - 21860860
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  21860647 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 21860744  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||  ||||||||||||| |||||||    
T  21860745 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaataaccttctaacacggaaacccatgaa 21860844  T
Q  375 aatgcacccaatgatg 390  Q
    |||||||| |||||||    
T  21860845 aatgcaccaaatgatg 21860860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 198 - 385
Target Start/End: Original strand, 41219060 - 41219248
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattt 296  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| |  |||| |||||| ||| ||||| ||||||| ||||||||||||||||    
T  41219060 tgtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacatcggttctcactaat-cactaaaagcaattctcgccaaaacttataattt 41219158  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||| || ||||| ||| ||| ||||| ||||||||||||    
T  41219159 tacccgttctcacaaaatgaccaaaataaccctaagtccaaaatgacaaaaataccattctaatacgaaaacccatgcaaatgcacccaa 41219248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 13 - 325
Target Start/End: Complemental strand, 27329528 - 27329215
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctc-aacctaatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||  | |        |  ||||  |||||| ||||||||| ||| ||| ||||||| |||    
T  27329528 aatatcttatgaaatgaaagtgtgaggaaatttcctctaaga-caaggcttttgtagtaagtttccttaacgggcctaactctcaaacttaatggattta 27329430  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| |||||||| |||| |||||||||| ||||||||||  ||||||||||||||||| |||| ||||||  |||| ||| |||||| ||| |    
T  27329429 acccatttctattcacatctaaaatgtttctacactcacaacggtaaatcactaataacggtcaaataacagtaaaatgtcaccaacggtcact-aacgg 27329331  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||| ||||||| |||||||||||| |||| ||||||||  |||| ||||| |||| ||||||||||||||||||||||||||||||||||| | ||||    
T  27329330 taaaaccttaattattactctagtaatttagtaaaacaacagttctcactaa-tcactaaaagtaattctcaccaaaacttataattttacccatcctca 27329232  T
Q  309 caatatgaccaaaatac 325  Q
    ||| |||||||||||||    
T  27329231 caaaatgaccaaaatac 27329215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 20532060 - 20532273
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||  |||||| ||| |||||||||    
T  20532060 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattcccactaat-cactaaaagtaat 20532157  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  20532158 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacctttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 20532257  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  20532258 aatgcacccaatgatg 20532273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 20931955 - 20932168
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  20931955 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 20932052  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  20932053 tctcccccaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 20932152  T
Q  375 aatgcacccaatgatg 390  Q
    |||||||| |||||||    
T  20932153 aatgcaccaaatgatg 20932168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 20913640 - 20913853
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| |||||||| |||||   ||  ||||||||| |||||| ||| |||||||||    
T  20913640 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtgacttaatgaagtaactattctcactaat-cactaaaagtaat 20913737  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||| |  ||||||||||||| |||||||    
T  20913738 tctcccccaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtttaaaatgactaaaatacccttctaacacggaaacccatgaa 20913837  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  20913838 aatgcacccaatgatg 20913853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 20346674 - 20346853
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| || ||||||||||||| ||||| |||| ||||||||||||| |||     
T  20346674 gtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cataaaagtaattctcgccaaa-cttacaattttacccgttttcat 20346771  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     | |||||  ||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||| ||||||||||||    
T  20346772 taaatgactgaaatacccctaagtccaaaatgactaaaataccattctaacatggaaacccatgaaaatacacccaatgatg 20346853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 37844100 - 37843889
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| | ||| | ||||||||||||   ||| ||||| ||  |||||||   ||||||||||    
T  37844100 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcagttt-attctagtaacttaacgaaataactaatcgcactaattactaaaagtaatt 37844002  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
     ||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||    |||||| |||||| ||||||||    
T  37844001 atcacccaaaattataattttacccgttctcacaaaatgaccaaaatactcctaagtctaaaatgactaaaatactcttctaacccggaaacccatgaaa 37843902  T
Q  376 atgcacccaatga 388  Q
    ||||| |||||||    
T  37843901 atgcatccaatga 37843889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 13 - 369
Target Start/End: Original strand, 49968132 - 49968480
Alignment:
Q  13 aatatctta-tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggactta 111  Q
    ||||||||| || ||||||||||||||||||||||| ||||| ||| |        | ||||||||||||||||||||||| ||| || || ||||||||    
T  49968132 aatatcttagtgtaatgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtccccttaatgggcctaactctccacttagtggactta 49968230  T
Q  112 accaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| |||||||   ||| |||||||||| |  | ||||| |||||||||||||||           |||| ||||| ||| |||||||||  |    
T  49968231 acccatttctattcacatatcaaatgtttctacactctaaccggtaattcactaataacggt-----------aaaatatcaccaacggtcactaaatgg 49968319  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaacaacta-ttcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctc 307  Q
    |||||| | |||| |||||||||||||   | ||||| | |  |||  |||||  ||| |||||||||| |||||||||||||||||||||| |||||||    
T  49968320 taaaatatcaattattactctagtaacccggtaaaactaatggttcacactaaa-cactaaaagtaattatcaccaaaacttataattttactcgttctc 49968418  T
Q  308 acaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc 369  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  | |||||||||||||    
T  49968419 acaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttataacacggaaacc 49968480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 44034589 - 44034386
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| || |||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  44034589 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-accctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 44034492  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||||||| |||| ||||||||||| |||        |||||||||||| ||||||||||||||||||||||    |||| |||| ||| |||||||    
T  44034491 tctcaccaaaaattatgattttacccgtcctc--------accaaaatacccttaagtccaaaatgactaaaatactcttctagcacgtaaacccatgaa 44034400  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  44034399 aatgcacccaatga 44034386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 131 - 386
Target Start/End: Original strand, 16646515 - 16646773
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| ||||||||||    |||| ||||||||| |||||||||||| || || ||| |||||| ||| |||||||  |||||  ||| |    
T  16646515 aaaatgtttctacactcacaacggtaaaatactattaacggtcacttaacggtaaaatattaccaacggtcacttaacggtaaaatactaattactaccc 16646614  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    ||||||||||| |||| ||   |||| |||||  ||| |||| ||||||||||||||| |||  | ||||| | | | | ||| ||||||||||||||||    
T  16646615 tagtaacttagtaaaataatggttctcactaaaacactaaaaataattctcaccaaaaattactaatttactcttacacccaaaatgaccaaaatacccc 16646714  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    | ||| ||||||||||||| || |  ||||||||| ||| |||| ||||||||||||||    
T  16646715 tgagttcaaaatgactaaattacccttctaacacgaaaatccataaaaatgcacccaat 16646773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 15860958 - 15860883
Alignment:
Q  316 accaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  15860958 accaaaatacccctaagttcaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 15860883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 20348288 - 20348392
Alignment:
Q  287 cttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    |||| ||||||||||||| ||| || ||||   |||||||| |||||||||||||||||||||| || ||||||||||||| |||||||||| || ||||    
T  20348288 cttacaattttacccgttttcataaaatgattgaaatacccataagtccaaaatgactaaaatatcattctaacacggaaatccatgaaaatacatccaa 20348387  T
Q  386 tgatg 390  Q
    |||||    
T  20348388 tgatg 20348392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 733 - 780
Target Start/End: Complemental strand, 21926041 - 21925994
Alignment:
Q  733 aaatattagaccaaaatcttgcatcgaaagtaagcaacatcaatcttg 780  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21926041 aaatattagaccaaaatcttgcatcgaaagtaagcaacatcaatcttg 21925994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 16657427 - 16657505
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||||| |||| ||||||||||| |||||||||||    
T  16657427 atgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatg 16657505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 327
Target Start/End: Original strand, 41394844 - 41394988
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctca 280  Q
    |||||||  |||| ||| || ||||||| ||||||||| ||||| ||||||||||||||  |||| | ||||||| |||||||   ||||||||||| ||    
T  41394844 ggtaaaatgtcactaacggttactaaacggtaaaatctcaattt-actctagtaacttaataaaata-ctattctcactaattactaaaagtaattccca 41394941  T
Q  281 ccaaaacttataatttt-acccgttctcacaatatgaccaaaataccc 327  Q
    | |||| |||||||||| ||||| |||||||| |||||||||||||||    
T  41394942 ctaaaa-ttataatttttacccgatctcacaaaatgaccaaaataccc 41394988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 36355752 - 36355674
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||||||| ||||| |||| ||||||||||||    
T  36355752 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacggaaatccatgtaaatacacccaatgatg 36355674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 20346562 - 20346679
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||||| |||| | | |||| |||||||||| |  | ||||| || |||||||||    
T  20346562 aagtctccttattgggcctaaccctccacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggtaattaactaataac 20346661  T
Q  170 ggtcaattaacggtaaaa 187  Q
    |||||| ||| |||||||    
T  20346662 ggtcaagtaaaggtaaaa 20346679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 20832195 - 20832135
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| || ||||||||||||    
T  20832195 aaaagtaattctcacccaaaactataattttacccgttctcacaaaattaccaaaataccc 20832135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 510
Target Start/End: Complemental strand, 21926193 - 21926151
Alignment:
Q  468 gcacccgcatccggcaaccccctcataagataagaataagcag 510  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  21926193 gcacccgcatccggcaaccccctcataagataagaataggcag 21926151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 51627200 - 51627076
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| ||||||||||||||| |||  | ||||| | | | | ||| ||||||| ||||||| | ||||||||||||||||| || |  ||||||||| ||    
T  51627200 aaaaataattctcaccaaaaattactaatttactcttacacccaaaatgaccagaatacccatgagtccaaaatgactaaattacccttctaacacgaaa 51627101  T
Q  367 ac-catgaaaatgcacccaatgatg 390  Q
    || |||||||||| |||||||||||    
T  51627100 actcatgaaaatgtacccaatgatg 51627076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 4975083 - 4975160
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacact-ctaacacggaaacc-atgaaaatgcacccaatgat 389  Q
    ||||| ||| || |||| ||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||||    
T  4975083 atgactaaattatccctgagtccaaaatgactaaatta-cacttctaacacggaaacccatgaaaatgcacccaatgat 4975160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 22142842 - 22142748
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgat 389  Q
    ||||||| | ||| ||| |||||||||||||||||||||| |||||||| ||| || |  ||||||||| |||||   |||||||||| ||||||    
T  22142842 tttacccttactcgcaaaatgaccaaaatacccctaagtctaaaatgaccaaattacccttctaacacgaaaacccataaaatgcacctaatgat 22142748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 49996776 - 49996691
Alignment:
Q  305 ctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||| || |  ||||||||| |||   ||||||||||||| ||||||    
T  49996776 ctcacaaaatggccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaatttatgaaaatgcacctaatgat 49996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 22828887 - 22828827
Alignment:
Q  331 agtccaaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| || |  ||||||||||||||| ||||||||||| |||||||||    
T  22828887 agtccaaaatgactaaattacccttctaacacggaaaccaatgaaaatgcatccaatgatg 22828827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 51453140 - 51453239
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  51453140 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 51453238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 18621394 - 18621339
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||||| | || |||||||||||||| ||||||||||||||||||||    
T  18621394 tttacccttgctcaccaaataaccaaaatacccctgagtccaaaatgactaaaata 18621339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 24243745 - 24243690
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||||||| ||||||||||||||||| |||  |||||||||||||||    
T  24243745 tttacccttgctcacaaaatgaccaaaatacccctgagtttaaaatgactaaaata 24243690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 41394970 - 41395025
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||||| |||||| |  ||||||||||||  ||||||||||||||||||||||    
T  41394970 caaaatgaccaaaatacccttctaacacggaactcatgaaaatgcacccaatgatg 41395025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 9783830 - 9783789
Alignment:
Q  13 aatatctta-tgaaatgaaagtgtgaggaaatttcttataag 53  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  9783830 aatatcttagtgaaatgaaagtgtgaggaaatttctcataag 9783789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 41218962 - 41219055
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaa-ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggt 172  Q
    ||||| ||||||||   |||||||||||||||| ||| ||||| |||| | ||||| |||||||||| |  | ||||| |||||||||||||||    
T  41218962 taatgagcctaaccaaaaacctaatggacttaacccattttctattcaaaacaaaatgtttctacactctaaccggtaattcactaataacggt 41219055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 390
Target Start/End: Complemental strand, 20813258 - 20812934
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaat 166  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||| |||||| |||| |||| ||| |||||||| ||||||||||||||| ||||||    
T  20813258 atcaagtccccttaatgggcctaactctccacttaatggacttaacccatttctattcaaatcacaaatgtttctacccccacaacggtattttactaat 20813159  T
Q  167 aacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac 266  Q
    ||||||| | ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||    
T  20813158 aacggtcgaataacggtaaaatatcacaaacagtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaactattcttactaa-ccac 20813060  T
Q  267 -aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgga 365  Q
     |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |  | |||||| ||    
T  20813059 taaaagtaactctcaccaaaacttataattttacccgttctcacaaaatgaccaaaatacccctaagtccataatgactaaaatacccttttaacacaga 20812960  T
Q  366 aa-ccatgaaaatgcacccaatgatg 390  Q
    || ||| |||||||||||||||||||    
T  20812959 aacccacgaaaatgcacccaatgatg 20812934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 23269629 - 23269320
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| |||||||||||||||||| |||||    
T  23269629 tgggcctaaccctcaacttaatggacttaacccatttctattcacatctcaaatgtttctacactccaatcggtaattcactaataacggtcaagtaacg 23269530  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    |||||| ||||| ||| |||||||||| ||||||||||||||||||||| ||||||||| |||||||   |||  ||||| |||| ||||||||||||||    
T  23269529 gtaaaatatcactaacggtcactaaacggtaaaatcttaattttactctcgtaacttagtaaaacaatggttcccactaa-tcactaaaagtaattctca 23269431  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| || |  |||||||| |||| ||||||||||||    
T  23269430 ccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaaatccaaaatgactaaattacccttctaacacagaaacccatgaaaatgc 23269331  T
Q  380 acccaatgatg 390  Q
    |||||||||||    
T  23269330 acccaatgatg 23269320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 16732655 - 16733033
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||  | |        | ||||||||| | ||||||||||| || || || |||||| |||    
T  16732655 aatatcttatgaaatgaaagtgtgaggaaatttcctctaagacaa-ggtttttatagcaagtccccctgatgggcctaactctaaagcttaatggattta 16732753  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||   ||| ||| |||| ||||||| || |||||||||| | |||||||||||||||| ||| ||||||| |  || ||| |||||||||| |    
T  16732754 acccatttcaactcaaatctaaaatgtttctatacacacaacggtaat-cactaataacggtcaaataatggtaaaatactaccaacggtcactaaacgg 16732852  T
Q  211 taaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||| ||||||||||||||| |||||||| ||||||||  |||| |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  16732853 taaaaccttaattttactctaataacttagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacctataattttacccgttctcac 16732951  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || |||||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||||||||    
T  16732952 aaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatg 16733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 71 - 388
Target Start/End: Original strand, 34395799 - 34396117
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||||| ||||||||  ||| ||||||| || |  | ||||| || |||||||||    
T  34395799 aagtctccttattgggcctaaccctccacttaatggacttaacccatttctattcacatctcaaatgtttctatactctaaccggtaattaactaataac 34395898  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aa 268  Q
    |||||| |||||||||||  |||| ||  |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| |||| | ||| ||    
T  34395899 ggtcaagtaacggtaaaatgtcaccaatggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactact-cactaa 34395997  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa- 367  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  | ||||||| |||     
T  34395998 aagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttttaacacgaaaac 34396096  T
Q  368 ccatgaaaatgcacccaatga 388  Q
    ||||||||||||||| |||||    
T  34396097 ccatgaaaatgcaccaaatga 34396117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 83 - 390
Target Start/End: Original strand, 44347375 - 44347683
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    |||||||||||||| || |||||||||||||| |||||| |||| | |||||  |||||||||| |  | ||||| |||||||||||||||||| |||||    
T  44347375 tgggcctaaccctccacttaatggacttaacccatttctattcaaaacaaaaatgtttctacactctaatcggtaattcactaataacggtcaagtaacg 44347474  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||  ||| |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||| |||| ||||||||||| ||    
T  44347475 gtaaaatgtcattaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaa-tcactaaaagtaattccca 44347573  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgc 379  Q
    |||||| ||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||||||||| |  || ||||||||||| |||||||||||    
T  44347574 ccaaaa-ttataattttacatgttctcacaaaatgaccaaaatacctctaagtccaaaatgactaaaatacccttccaacacggaaacacatgaaaatgc 44347672  T
Q  380 acccaatgatg 390  Q
    || ||||||||    
T  44347673 actcaatgatg 44347683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 85 - 390
Target Start/End: Original strand, 44056469 - 44056776
Alignment:
Q  85 ggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggt 183  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  44056469 ggcctaaccctcaacttaatggacttaacccatttctattcaaatcacaaatgtttctacacacacaacggtatttcactaataacggtcaattaacggt 44056568  T
Q  184 aaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattctt--actaattcacaaaagtaa-ttctc 279  Q
     ||||||||| ||| |||||||||| ||||||| | |||| |||||||||| |||  | ||||| | |   |||  || |||  || | | ||| ||| |    
T  44056569 gaaacatcaccaacggtcactaaacggtaaaatatcaattattactctagtcactcggtaaaactaatggccttcaacaaat--actataataatttccc 44056666  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgc 379  Q
     |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  44056667 gccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaaccatgaaaatgc 44056765  T
Q  380 acccaatgatg 390  Q
    |||||||||||    
T  44056766 acccaatgatg 44056776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 163 - 390
Target Start/End: Complemental strand, 53704367 - 53704140
Alignment:
Q  163 taataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaat 262  Q
    ||||||||||||| |||||||||||  |||| |||  ||||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||| ||||||    
T  53704367 taataacggtcaagtaacggtaaaatgtcactaacgatcactaaacggtaaaatctcaattttactctagtaacttagtaaaatagctattctcactaat 53704268  T
Q  263 tcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaaca 361  Q
     ||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  |||||||    
T  53704267 -cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaaca 53704170  T
Q  362 cggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||| |||||| ||||||||||||||||    
T  53704169 cggaaacccatgagaatgcacccaatgatg 53704140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 71 - 390
Target Start/End: Complemental strand, 8872180 - 8871859
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||| | |||| | |||||  |||||||||| |  | || || ||  ||||||||    
T  8872180 aagtctccttattgggcctaaccctccacttaatggacttaacccatttatattcaaaccaaaaatgtttctacactctgaccgataattagctaataac 8872081  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aa 268  Q
    ||| || |||||||| ||  |||| ||| ||||| |||| ||||||||||| ||||||||||| ||||||| |||| |||||||   |||||| ||| ||    
T  8872080 ggttaagtaacggtagaatgtcactaacggtcaccaaacggtaaaatcttagttttactctagcaacttagtaaaataactatttccactaat-cactaa 8871982  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa- 367  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||| |  || ||||||||||     
T  8871981 aagtaattctcaccaaaaattataattttatccgttctcacaaaatgaccaaagtacccctaagtccaaaatgactaaaatacccttccaacacggaaac 8871882  T
Q  368 ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| ||||||||    
T  8871881 ccatgaaaatgcactcaatgatg 8871859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 158 - 390
Target Start/End: Complemental strand, 55376225 - 55375993
Alignment:
Q  158 ttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattctta 257  Q
    ||||||||||||||| ||||| |||||| |  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||   ||| |||||||||      
T  55376225 ttcactaataacggttaatta-cggtaagatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaacttaatgaaataactattctct 55376127  T
Q  258 ctaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactc 356  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||  |||||||||||||| ||||||| || ||    
T  55376126 ctaat-cactaaaagtaactctcaccaaaacttacaattttacccgttctcaccaaatgaccaaaataccgttaagtccaaaatgattaaaataccattc 55376028  T
Q  357 taacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||| |||||||||||||||||||||||    
T  55376027 taacacggaaacccatgaaaatgcacccaatgatg 55375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 54117887 - 54117676
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  54117887 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 54117789  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  54117788 tcccaccaaaa-ttattattttacccgttctcacaaaaagaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 54117690  T
Q  375 aatgcacccaatga 388  Q
    ||||||| ||||||    
T  54117689 aatgcactcaatga 54117676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 83 - 327
Target Start/End: Complemental strand, 53907404 - 53907162
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| | ||||| |||||||||| |  |||| ||||| ||||||||||||| | ||||||    
T  53907404 tgggcctaaccctcaacttaatggacttaacccatttcttttcaaaccaaaatgtttctacactccaaacgatatttaactaataacggtcgagtaacgg 53907305  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcac 281  Q
    ||||   |||| ||| |||||||||| |||||| ||| | |||||||||||||||||| |||| || |||||| ||||| |||| ||||||||||| |||    
T  53907304 taaattgtcactaacggtcactaaacggtaaaacctt-agtttactctagtaacttagtaaaataaatattctcactaa-tcactaaaagtaattcccac 53907207  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||    
T  53907206 caaaa-ttataattttacccgttctcccaaaatgaccaaaataccc 53907162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 387
Target Start/End: Complemental strand, 5682197 - 5681924
Alignment:
Q  116 atttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaa 214  Q
    |||||| ||||||||  ||| |||||||||| |  | ||||| || |||||||||| |||| |||||||||||  |||| ||| |||||||||| |||||    
T  5682197 atttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacgatcaagtaacggtaaaatgtcactaacggtcactaaacggtaaa 5682098  T
Q  215 atcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataa-ttttacccgttctcacaat 312  Q
    |||| ||||||||||||||||||||   ||| ||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||     
T  5682097 atctcaattttactctagtaacttaatgaaataactattctcactaa-tcactaaaagtaattctcaccaaaacttataatttttacctgttctcacaaa 5681999  T
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatg 387  Q
    |||| ||||||||| |||||||| || ||||||||||| |  |||||||| |||| ||||||||||||||||||||    
T  5681998 atgatcaaaataccgctaagtcc-aagtgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatg 5681924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 22 - 390
Target Start/End: Complemental strand, 819685 - 819328
Alignment:
Q  22 tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttct 121  Q
    |||||||||||||||||||||||||| ||||  ||| |        |||||||| |||||||||| || ||||||||| |||||||||||||| ||||||    
T  819685 tgaaatgaaagtgtgaggaaatttctcataaatgta-ggtttttatatcaagtctccttaatgggtctgaccctcaacttaatggacttaacccatttct 819587  T
Q  122 tttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatctta 220  Q
     ||||||||  ||| |||||||||| |  | ||||| |||| ||||||||||           |||| ||||| |   |||||||||| |||||| | ||    
T  819586 attcacatctcaaatgtttctacactctaaccggtaattcattaataacggt-----------aaaatatcactagtggtcactaaacggtaaaaccata 819498  T
Q  221 att-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgacc 318  Q
    ||| ||||||||||||||||| ||||||||  |||| |||||| ||| |||||||||||||||||||||||||||||| |||||| ||| ||| ||||||    
T  819497 attattactctagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacttataattt-acccgtcctcgcaaaatgacc 819400  T
Q  319 aaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||| |||||||||||||||| |  | |||||| |||||||||| |||||| |||||||||    
T  819399 aaaatacccctaagttcaaaatgactaaaatacccttttaacacagaaaccatgagaatgcatccaatgatg 819328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 25118802 - 25118590
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  25118802 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 25118705  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  25118704 tcccaccaaaa-ttataattttacccgttctcgcaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 25118606  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  25118605 aatgcacccaatgatg 25118590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 22 - 388
Target Start/End: Complemental strand, 21959219 - 21958860
Alignment:
Q  22 tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttct 121  Q
    ||||||||||||||||| |||||||| |||||| || |        ||||||||||||||||||||||||| ||| || |||||||||||||| ||||||    
T  21959219 tgaaatgaaagtgtgagaaaatttctcataagacta-ggtttttatatcaagtccccttaatgggcctaactctccacttaatggacttaacccatttct 21959121  T
Q  122 tttcacat-caaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatctta 220  Q
     |||| ||  |||| |||||||| | |||||||||| |||||||||||| ||| | ||||||||||||||||| ||  |||||||||  ||||||| | |    
T  21959120 attcaaataaaaaatgtttctacccacacaacggtaattcactaataacagtcgaataacggtaaaacatcaccaatggtcactaaatggtaaaatatca 21959021  T
Q  221 att-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgacc 318  Q
     || |||||||||||||   | ||||| ||   |||  |||       |||| ||||||||| | |||||||||| ||||||||||||||||| ||||||    
T  21959020 cttattactctagtaacccggtaaaactaatggttcacact-------aaaaataattctcatc-aaacttataa-tttacccgttctcacaaaatgacc 21958930  T
Q  319 aaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatga 388  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||||  ||||||||||||| ||||||    
T  21958929 aaaatacccctaagtctaaaatgactaaaatacccttctaacacggaactcatgaaaatgcacacaatga 21958860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 13 - 326
Target Start/End: Original strand, 30458389 - 30458687
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||| |        | |||||| |||||||||||||||||||| ||  |||||||||||    
T  30458389 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtctccttaatgggcctaaccctccactcaatggacttaa 30458486  T
Q  113 ccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    |  |||||| ||||||||  ||| | |||||||| |  ||||||| ||||||||||||           ||||||| ||||| ||| |||||||||| ||    
T  30458487 ctcatttctattcacatcttaaatgcttctacactct-aacggtaattcactaataac-----------ggtaaaatatcactaacggtcactaaacggt 30458574  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| ||||||| | |||||||||||||||| |||||||||||||||||    
T  30458575 aaaatcttaattttactctagtaacttagtaaaacaactattctcactaa-ccactaaagtaactttcaccaaaacttataa-tttacccgttctcacaa 30458672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 12836791 - 12836612
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||||||  ||||| ||||||||||| ||||| || ||||| |||||  ||| |||||||||||||||| |||||||||||||||||||||||||    
T  12836791 gtaaaatcttaaccttactttagtaacttagtaaaactaccattctcactaac-cactaaaagtaattctcaccgaaacttataattttacccgttctca 12836693  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||| ||||||||||||||  ||||| |||||||||||||||| |  ||||||||||||| |||||||||||||| ||||||    
T  12836692 caaaatgaccaaaatacctttaagttcaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcactcaatga 12836612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 13722606 - 13722483
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||| |||    
T  13722606 aaaagtaattctcaccaaaacttataattt-acccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacagaa 13722508  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | |||||||||||||||||||||||    
T  13722507 acccatgaaaatgcacccaatgatg 13722483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 18293142 - 18292929
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||| ||  |||| ||| |||||||||| ||||||||| ||||| |||||||||| |||   ||| ||||||||| |||||  ||| |||||||||    
T  18293142 taacggtataatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaaattaatgaaataactattctcactaaa-cactaaaagtaat 18293045  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||| |  ||||||| ||||| |||||||    
T  18293044 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactataatacccttctaacaaggaaacccatgaa 18292945  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  18292944 aatgcacccaatgatg 18292929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 30232074 - 30231908
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||||||||||||| ||||||||  |||| ||||| |   |||| ||||||||||||||||||||||||| |||||||||||||| |||| ||||||    
T  30232074 ttactctagtaacttagtaaaacaacggttctcactaaatactaaaaataattctcaccaaaacttataattt-acccgttctcacaaaatgatcaaaat 30231976  T
Q  324 acccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||| ||  || |  ||||||||| ||| |||||||||||||||||||||||    
T  30231975 acccctaagtccaaaatgaccaatttacccttctaacacgcaaacccatgaaaatgcacccaatgatg 30231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 198 - 386
Target Start/End: Original strand, 9296151 - 9296340
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaag-taattctcaccaaaacttataattt 296  Q
    ||||||| ||| ||||||||| ||||||| ||||||||||||   ||| || |||||| |||||| ||| |||| |||||| |||||||| |||||||||    
T  9296151 tgtcacttaacggtaaaatctcaatttta-tctagtaacttaatgaaataaatattctcactaat-cactaaaggtaattcccaccaaaaattataattt 9296248  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtc-caaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    ||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||| |  ||||||||||||| |||||||||||||||||||    
T  9296249 tacccgttctcaccaaatgaccaaaatacccttaagtctaaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaat 9296340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 180 - 390
Target Start/End: Original strand, 122511 - 122722
Alignment:
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||     
T  122511 cggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattcc 122608  T
Q  279 caccaaaacttataatttt-acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    ||| |||  |||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| |  |   ||||| ||| |||||||||    
T  122609 cactaaacattataatttttacccgttctcataaaatgaccaaaatacccctaagtctaaaatgactaaaataccctttccacacgaaaacccatgaaaa 122708  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  122709 tgcacccaatgatg 122722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 198 - 386
Target Start/End: Original strand, 9290280 - 9290469
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaag-taattctcaccaaaacttataattt 296  Q
    ||||||| ||| ||||||||||||||||| || |||||||||   ||| || |||||| |||||| ||| |||| |||||  || ||||| |||||||||    
T  9290280 tgtcacttaacggtaaaatcttaatttta-tccagtaacttaatgaaataaatattctcactaat-cactaaaggtaatttccatcaaaaattataattt 9290377  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtc-caaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    ||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  9290378 tacccgttctcaccacatgaccaaaatacccttaagtctaaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaat 9290469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 267 - 388
Target Start/End: Complemental strand, 39121128 - 39121005
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgtt--ctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgg 364  Q
    ||||||||||||| || ||| |||||||||||||||||  ||||||| ||||||||||||| | |||||| ||||||| ||||||| |  ||||||||||    
T  39121128 aaaagtaattctcccccaaaattataattttacccgttttctcacaaaatgaccaaaatactcttaagtctaaaatgattaaaatacccttctaacacgg 39121029  T
Q  365 aaaccatgaaaatgcacccaatga 388  Q
    ||||||||||||||||||||||||    
T  39121028 aaaccatgaaaatgcacccaatga 39121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 200 - 350
Target Start/End: Original strand, 13247060 - 13247207
Alignment:
Q  200 tcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttta 298  Q
    ||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||| | |||||| |||||||||||    
T  13247060 tcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattccc-ccaaaa-ttataatttta 13247155  T
Q  299 cccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||||||||| ||||||||||||||| |||  |||||||||||||||||    
T  13247156 cccgttctcacaaaatgaccaaaatacccttaaaaccaaaatgactaaaata 13247207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 13 - 388
Target Start/End: Complemental strand, 45458619 - 45458253
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    ||||||||||||||||||||||| |||||||||| | |||||  | |        ||||||||||||||||||||||||| ||||| || |||||| |||    
T  45458619 aatatcttatgaaatgaaagtgtaaggaaatttcctctaagacaa-ggtttttatatcaagtccccttaatgggcctaactctcaaacttaatggattta 45458521  T
Q  112 accaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    ||| |||||   ||||   ||||  ||| ||||| |||| ||||| |||||||||||||||           |||| ||||  ||| | |||||||| ||    
T  45458520 acccatttcaactcactctaaaacatttatacacacacagcggtaattcactaataacggt-----------aaaatatcatcaacggccactaaacggt 45458432  T
Q  212 aaaatcttaatt--ttactctagtaacttaggaaaacaactattcttactaattcacaa-aagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||| |||||||  ||||| |||||||| || |||||||   |||| |||||| ||| | |||||||  ||||||||||||||||||| |||||||| ||    
T  45458431 aaaaccttaattatttactatagtaactcagtaaaacaatggttctcactaat-cactagaagtaatcatcaccaaaacttataattt-acccgttcaca 45458334  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatga 388  Q
    | | |||||||||||||||||||||  ||||||||||||||| |  |||||||| ||||| || |||||||||| ||||||    
T  45458333 ccaaatgaccaaaatacccctaagtttaaaatgactaaaatacccttctaacacagaaactcacgaaaatgcacgcaatga 45458253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 15045592 - 15045670
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||||    
T  15045592 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatg 15045670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 15108832 - 15108754
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||||    
T  15108832 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatg 15108754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 30232258 - 30232090
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |         | ||||||| | ||||||||||||||||||| ||||||||||||    
T  30232258 aatatcttatgaaatgaaagtgtgaggaaatttctcataagactaggtttttgtagt-aagtcccataaatgggcctaaccctcaacttaatggacttaa 30232160  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    || |||| | |||| | | |||| |||||||||| |  |||||||  |||| |||||||||||| |||||    
T  30232159 cccatttttattcaaaccaaaaatgtttctacactccaaacggtaaatcacaaataacggtcaaataacg 30232090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 13809040 - 13808916
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||  | ||||| | | | | ||| ||||||||||||||| ||||||||||||||||||| || |  | ||||||||||    
T  13809040 aaaagtaattctcaccaaaagttactaatttactcttacactcaaaatgaccaaaatacccataagtccaaaatgactaaattacccttataacacggaa 13808941  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | |||||||||| ||||||||||||    
T  13808940 acccatgaaaatacacccaatgatg 13808916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 34177174 - 34177050
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||  | ||||| | | | | ||| ||||||||||||||||| ||||||||||||||||| || |  | ||||| ||||    
T  34177174 aaaagtaattctcaccaaaagttactaatttactcttacactcaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttataacatggaa 34177075  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | ||||||||||||||| |||||||    
T  34177074 acccatgaaaatgcaccaaatgatg 34177050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 41255875 - 41255781
Alignment:
Q  296 ttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    |||||| | ||||||| ||||||||||||||||| ||||||||||||||||| || |  ||||| ||| ||| ||||||||||||||| ||||||    
T  41255875 ttacccttactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaatacgaaaatccatgaaaatgcacctaatgat 41255781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 390
Target Start/End: Original strand, 27961695 - 27961815
Alignment:
Q  271 gtaattctcaccaaaactta-taattttacccgttctcacaatatgaccaaaatacccct-aagtccaaaatgactaaaataacactctaacacggaaac 368  Q
    |||||||||||||||| ||| ||||||| ||| | ||| | | |||| |||||||||||  |||||||||||||||||| || |  |||||||||||| |    
T  27961695 gtaattctcaccaaaagttactaatttt-cccatactcgcgaaatgatcaaaataccccccaagtccaaaatgactaaattacccttctaacacggaacc 27961793  T
Q  369 catgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||    
T  27961794 tatgaaaatgcacccaatgatg 27961815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 52265018 - 52264921
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccc-taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||| | | ||| |||||||||||||||| ||||||||||||||||||| || |  ||||||||||||| |||| ||||||||| ||||||||    
T  52265018 tttacccgtacacccaaaatgaccaaaataccccctaagtccaaaatgactaaattacccttctaacacggaaacccataaaaatgcactcaatgatg 52264921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 13247196 - 13247272
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||| ||||||||| |||  ||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||    
T  13247196 atgactaaaatacccttaaaaccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 13247272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 40885113 - 40884991
Alignment:
Q  225 tactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    |||||||||||||||| |||| || | |||| |||||  ||| |||| ||||||||| ||||| |  |||||| |||| | |||| || |||||||||||    
T  40885113 tactctagtaacttagcaaaataattgttctcactaaaacactaaaaataattctcatcaaaattactaattt-acccttactcataaaatgaccaaaat 40885015  T
Q  324 acccctaagtccaaaatgactaaa 347  Q
    |||||| |||||||||||||||||    
T  40885014 acccctgagtccaaaatgactaaa 40884991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 37956510 - 37956432
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||| ||||| | ||||||||||||||||| || | |||||||||||||| ||||||||||| |||| ||||||    
T  37956510 atgaccaaactacccttgagtccaaaatgactaaattacccctctaacacggaaacccatgaaaatgtaccccatgatg 37956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 47534581 - 47534463
Alignment:
Q  272 taattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-ca 370  Q
    ||||||||||||||| |  ||||||||||| | |||  || |||| ||||||||||||  |||||||||||||||| || |  |||||| || |||| ||    
T  47534581 taattctcaccaaaattactaattttacccttgctcgtaaaatgatcaaaatacccctgggtccaaaatgactaaattacccttctaacgcgaaaactca 47534482  T
Q  371 tgaaaatgcacccaatgat 389  Q
    ||||||| |||||||||||    
T  47534481 tgaaaatacacccaatgat 47534463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 267 - 389
Target Start/End: Complemental strand, 15012819 - 15012697
Alignment:
Q  267 aaaagtaattctcaccaaaactta-taattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgga 365  Q
    |||| ||||||||||||||| ||| |||||  |||| | | ||||| ||||||||||||||||  |||| |||||||||||| || |  ||||| ||| |    
T  15012819 aaaaataattctcaccaaaaattactaatt--acccttacccacaaaatgaccaaaatacccccgagtctaaaatgactaaattacccttctaatacgaa 15012722  T
Q  366 aa-ccatgaaaatgcacccaatgat 389  Q
    || ||||||||||||||||||||||    
T  15012721 aatccatgaaaatgcacccaatgat 15012697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 15135549 - 15135488
Alignment:
Q  267 aaaagtaattctcacc-aaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| || || |||||||||    
T  15135549 aaaagtaattctcacccaaaaattataattttacccgttctcacaaaattactaaaataccc 15135488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 18494031 - 18493947
Alignment:
Q  73 gtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggta 156  Q
    ||||||| ||||||||||||||| | | |||||||||||||| |||||| |||| ||| |||| |||||||||| ||||| ||||    
T  18494031 gtcccctaaatgggcctaaccctaaccttaatggacttaacccatttctattcaaatctaaaatgtttctacacacacaatggta 18493947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 30458670 - 30458725
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||| |  ||||| |||||||||||||||||||| |||||||||    
T  30458670 caaaatgactaaaatacctttctaatacggaaaccatgaaaatgcatccaatgatg 30458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 12836953 - 12836853
Alignment:
Q  25 aatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttctttt 124  Q
    ||||||||||||||||||||||| ||||||||| |         | ||||| ||||| |||||||||||||| || |||||||||||||| |||||| ||    
T  12836953 aatgaaagtgtgaggaaatttctcataagagtaggtttttatact-aagtctccttattgggcctaaccctccacttaatggacttaacccatttctatt 12836855  T
Q  125 ca 126  Q
    ||    
T  12836854 ca 12836853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 16327539 - 16327440
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  16327539 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 16327441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 37956654 - 37956599
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaa 186  Q
    |||| |||||||||| | |||||||| || |||||||||||||| |||||||||||    
T  37956654 aaaatgtttctacacactcaacggtaatttactaataacggtcacttaacggtaaa 37956599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 13047831 - 13047733
Alignment:
Q  229 ctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || ||||||||||||    
T  13047831 ctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaataccc 13047733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 14901992 - 14902066
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    ||||||| ||||||||  ||||||||||||||||| || |  ||||||||| ||| ||||||||||||| |||||    
T  14901992 atgaccataatacccccgagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcatccaat 14902066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 17145268 - 17145184
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||| |||||||||   ||| ||||||| |||||| ||   ||||||||||| ||| |||| ||||||||||||||||||||||    
T  17145268 ttactccagtaacttaatgaaataactatttttactagttactaaaagtaattcccactaaaa-ttataattttacccgttctcac 17145184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 4e-96; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 13 - 388
Target Start/End: Original strand, 54424495 - 54424870
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| | ||||||||||||||||||| ||||| ||| |        | |||||||||||||||||||||||| ||||| ||||||||||||    
T  54424495 aatatcttatgaa-taaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtccccttaatgggcctaaccttcaacttaatggacttaa 54424592  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||| |||||||| |||| |||||||||| |  | ||||| |||||||||||||||||| ||||||||||| ||||| ||| |||||||||| ||    
T  54424593 cccatttctattcacatctaaaatgtttctacactctaatcggtaattcactaataacggtcaaataacggtaaaatatcactaacggtcactaaacggt 54424692  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  54424693 aaaatcttaattttactctagtaatttagtaaaccaactattcttactaa-ccactaaaagtaattctcaccaaaacttataattttactcgttctcaca 54424791  T
Q  311 atatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    | |||| |||||||||| |||||||||||||||||||||| |  ||||||||||||| |||  ||||||||||||||||    
T  54424792 aaatgatcaaaatacccttaagtccaaaatgactaaaatacccttctaacacggaaacccacaaaaatgcacccaatga 54424870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 68 - 390
Target Start/End: Complemental strand, 6146480 - 6146163
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaata 167  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||| | ||||| |||||||||| | |||||||| | ||||||||    
T  6146480 atcaagtctccttaatgggcctaaccctcaacttaatggacttaacccatttctattcaaaccaaaatgtttctacactc-caacggtaatccactaata 6146382  T
Q  168 acggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac- 266  Q
    ||||||||  ||||||||||  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||| ||||||||  |||| |||||  |||     
T  6146381 acggtcaaacaacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaacttagtaaaacaacggttctcactaac-cact 6146283  T
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    ||||||||||||||| |||||||||||||||||||    || ||| |||||||||||||||||||||||||||||||||||||| |  ||||  ||||||    
T  6146282 aaaagtaattctcacaaaaacttataattttaccc----tcgcaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctacaacggaa 6146187  T
Q  367 accatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||    
T  6146186 accatgaaaatgcacccaatgatg 6146163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 6154095 - 6153720
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||| |        |||||||| |||||||||| |||||||||||| ||||| ||||||    
T  6154095 aatatcttatgaag-gaaagtgtgaggaaatttctcataagtgta-ggtttttatatcaagtctccttaatgggtctaaccctcaacttaatgaacttaa 6153998  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    |  |||||| |||| | ||||| ||||| || | | |||||||||| ||||||||||||||||  ||||||||||  |||| ||| ||||||||||  ||    
T  6153997 ctcatttctattcaaaccaaaatgtttccaccctc-caacggtattccactaataacggtcaaacaacggtaaaatgtcactaacggtcactaaacgata 6153899  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||| |||||||||||| |||||||| ||||||||  |||| |||||  ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6153898 aaatctcaattttactctattaacttagtaaaacaacggttctcactaag-cactaaaagtaattctcaccaaaacttataattttacccgttctcacaa 6153800  T
Q  312 tatgaccaaaat-acccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
     |||||||||||  |||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||    
T  6153799 aatgaccaaaatcccccctaagtccaaaatgactaaaatacccttctaacacggaaaccatgaaaatgtacccaatgatg 6153720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 70 - 390
Target Start/End: Complemental strand, 16181657 - 16181335
Alignment:
Q  70 caagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataa 168  Q
    |||||||||||| |||||||||||||| || |||||||||||||| |||||| || | |||||||  ||||||||||    | || || |||||||||||    
T  16181657 caagtccccttattgggcctaaccctctacttaatggacttaacccatttctattaaaatcaaaaatgtttctacactataaccgataattcactaataa 16181558  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-a 267  Q
    ||||||| |||||||||||  |||| ||| |||||||||| ||||||||||||||||||||||||||||||| || |||||  |||| |||||| ||| |    
T  16181557 cggtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaagacaacggttctcactaat-cacta 16181459  T
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa 367  Q
    |||  |||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  16181458 aaaacaattctcaccaacaattataattttacccgtcctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaa 16181359  T
Q  368 -ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||    
T  16181358 cccatgaaaatgcacccaatgatg 16181335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 71 - 390
Target Start/End: Original strand, 17101875 - 17102195
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaagg-tttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| ||||||||||||||||| | |||||||||||| |||||| |||| |||| ||   ||||||||| |||| || |||||||||||||||    
T  17101875 aagtctccttattgggcctaaccctcaacttgatggacttaacccatttctattcaaatcacaattatttctacacacaca-cgatatttcactaataac 17101973  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa 269  Q
    |||||| ||||||||||||||||| ||| | |||||||| |||||||  |||| ||||||| ||||||||| ||||||||  |||| ||||||    |||    
T  17101974 ggtcaaataacggtaaaacatcaccaacggccactaaacggtaaaatgctaatgttactcttgtaacttagtaaaacaacggttctcactaatgactaaa 17102073  T
Q  270 agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-c 368  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||| |  ||||||||||||| |    
T  17102074 agtaattctcaccaaaacttataattttacccgttctctcaaaatgaccaaaatacccctaaattcaaaatgactaaaatacccttctaacacggaaacc 17102173  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    ||| ||||||||||||||||||    
T  17102174 cattaaaatgcacccaatgatg 17102195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 83 - 390
Target Start/End: Original strand, 13818062 - 13818371
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||||||||||||||| |||||||||||||| |||||| |||| | |||||  |||||||||| |  |  |||| |||||||||||||||||| |||||    
T  13818062 tgggcctaaccctcaacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaactggtaattcactaataacggtcaagtaacg 13818161  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||| ||    
T  13818162 gtaaaatgtcactaacagtcactaaacggtaaaatcttagttttactctagtaacttaggaaaataactattctcactaa-tcactaaaagtaattccca 13818260  T
Q  281 ccaaaacttataattttacccgttctcac-aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatg 378  Q
    |||||| ||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||| |  || |||||||||| |||||||||||    
T  13818261 ccaaaaattataatttta-ccgttctcacaaaaatgaccaaaataccccaaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatg 13818359  T
Q  379 cacccaatgatg 390  Q
    ||||||||||||    
T  13818360 cacccaatgatg 13818371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 19570386 - 19570078
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||| ||||||||||| |||||||||||||| |||||| |||| | |||||  |||||||||| |  | ||||| |||||||||||| ||||| |||||    
T  19570386 tgggcataaccctcaacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggtaattcactaataacagtcaagtaacg 19570287  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||  |||| ||||| |||| |||||||||||||     
T  19570286 gtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaacaacggttctcactaa-tcactaaaagtaattctcg 19570188  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    |||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |  |||||||||| ||||||||||||    
T  19570187 ccaaaaattataa-tttacccgttctcacaaaatgaccaaagtacccctaagtccaaaatgactaaaataacctttcaacacggaaacccatgaaaatgc 19570089  T
Q  380 acccaatgatg 390  Q
    |||||||||||    
T  19570088 acccaatgatg 19570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 78 - 390
Target Start/End: Complemental strand, 317210 - 316896
Alignment:
Q  78 cttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaat 176  Q
    |||| |||||||| ||||| || |||||||||||||| |||||| ||||||||  ||| ||||||| || |  | ||||| || |||||||||||||||     
T  317210 cttattgggcctacccctccacttaatggacttaacctatttctattcacatctcaaatgtttctatactctaaccggtaattaactaataacggtcaag 317111  T
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||||| ||||||| ||||||||||| |||| ||||||| | |||||| ||| |||||||||    
T  317110 taacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactatagtaacttagtaaaataactattatcactaat-cactaaaagtaat 317012  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |  | ||||||||||| |||||||    
T  317011 tcccaccaaaaattataactttactcgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaa 316912  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  316911 aatgcacccaatgatg 316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 71 - 390
Target Start/End: Original strand, 38528265 - 38528585
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| ||||||||| |||| || |||||||||||||| |||||| |||| |  ||||  |||||||||| |  | ||||| ||||||||||||    
T  38528265 aagtctccttattgggcctaatcctccacttaatggacttaacccatttctattcaaacaaaaaatgtttctacactctaaccggtaattcactaataac 38528364  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aa 268  Q
    |||||| |||| ||||||| |||  |||  ||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||| | |||| ||    
T  38528365 ggtcaagtaactgtaaaacgtcattaacgatcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcact-actcactaa 38528463  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa- 367  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |  ||||||||| |||     
T  38528464 aagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttctaacacgaaaac 38528562  T
Q  368 ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||||    
T  38528563 ccatgaaaatgcacccaatgatg 38528585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 34439036 - 34438740
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||||||| ||||||| |||||||||||||  |||||| ||||||||  ||| |||||||||| |  | ||||| |||||||||||||||             
T  34439036 tgggcctaatcctcaacttaatggacttaactcatttctattcacatctcaaatgtttctacactctaaccggtaattcactaataacggt--------- 34438946  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
      |||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||| |  |||| |||||| ||| ||||||||||||||    
T  34438945 --aaaatatcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacatcggttctcactaat-cactaaaagtaattctca 34438849  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgca 380  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||| |  ||| |||| |||||||||||||||||    
T  34438848 ccaaaacttataattt-acccgttctcacaaaatgaccaaaatacccctacgtccaaaatgactaaaatacccttctgacacagaaaccatgaaaatgca 34438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 79 - 388
Target Start/End: Original strand, 35124245 - 35124558
Alignment:
Q  79 ttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaatt 177  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||| |||||||  |||||||| | |||||||||| |||| ||||||||||||| |    
T  35124245 ttaatgggcctaaccctcaacttaatggacttaacccatttctgttcaaatcaaaaatgtttctacccacacaacggtaattcattaataacggtcaaat 35124344  T
Q  178 aacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaat 275  Q
    |||||||||||||||||||| |||||||||| ||||||| | |||| ||||| |||||||   | ||||| ||   |||  ||||| |   |||| ||||    
T  35124345 aacggtaaaacatcacaaacggtcactaaacggtaaaatatcaattattactttagtaacccggtaaaactaatggttcacactaaatactaaaaataat 35124444  T
Q  276 tctca-ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatga 373  Q
    | ||| |||||| |||||||||| ||||| ||||||| ||||||||||||||| ||||| |||||||||||||||| |  ||||||||||||| ||| ||    
T  35124445 tttcatccaaaatttataatttt-cccgtcctcacaaaatgaccaaaatacccttaagttcaaaatgactaaaatacccttctaacacggaaacccacga 35124543  T
Q  374 aaatgcacccaatga 388  Q
    |||||||||||||||    
T  35124544 aaatgcacccaatga 35124558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 202 - 390
Target Start/End: Complemental strand, 12348886 - 12348697
Alignment:
Q  202 actaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttaccc 301  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||   ||||||||||| |||||||  ||||||||| |||     
T  12348886 actaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaattactaaaagtaattcccaccaaatattataatttcacct 12348787  T
Q  302 gttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||| |||||||||    
T  12348786 gttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatg 12348697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 73 - 390
Target Start/End: Original strand, 14295980 - 14296299
Alignment:
Q  73 gtccccttaatgggcctaaccctcaacctaa-tggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacgg 171  Q
    ||||||||||||||||||||||| || || | |||| |||||| ||| |   ||| ||| ||| ||||||||||  |||||||||  |||||||||||||    
T  14295980 gtccccttaatgggcctaaccctaaagcttagtggatttaacccattccaactcaaatctaaatgtttctacacatacaacggtaaatcactaataacgg 14296079  T
Q  172 tcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcacaaaa 270  Q
    |||||||||||||||| |  || ||| || ||||||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||| |||||     ||||    
T  14296080 tcaattaacggtaaaatactaccaacggtaactaaacggtaaaatattaattattactttagtaacttagtaaaacaacggttctcactaaacagtaaaa 14296179  T
Q  271 gtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-cc 369  Q
     ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||  | |  ||||||||| ||| ||    
T  14296180 ataattctcaccaaaacttacaattt-acctgttctcacaaaatgaccaaaatacccctatgtccaaaatgactaaatcacccttctaacacgaaaaccc 14296278  T
Q  370 atgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||    
T  14296279 atgaaaatgcacccaatgatg 14296299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 73 - 390
Target Start/End: Original strand, 14301607 - 14301926
Alignment:
Q  73 gtccccttaatgggcctaaccctcaacctaa-tggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacgg 171  Q
    ||||||||||||||||||||||| || || | |||| |||||| ||| |   ||| ||| ||| ||||||||||  |||||||||  |||||||||||||    
T  14301607 gtccccttaatgggcctaaccctaaagcttagtggatttaacccattccaactcaaatctaaatgtttctacacatacaacggtaaatcactaataacgg 14301706  T
Q  172 tcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcacaaaa 270  Q
    |||||||||||||||| |  || ||| || ||||||| ||||||| |||||| ||||| ||||||||||| ||||||||  |||| |||||     ||||    
T  14301707 tcaattaacggtaaaatactaccaacggtaactaaacggtaaaatattaattattactttagtaacttagtaaaacaacggttctcactaaacagtaaaa 14301806  T
Q  271 gtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-cc 369  Q
     ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||||  | |  ||||||||| ||| ||    
T  14301807 ataattctcaccaaaacttacaattt-acctgttctcacaaaatgaccaaaatacccctatgtccaaaatgactaaatcacccttctaacacgaaaaccc 14301905  T
Q  370 atgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||    
T  14301906 atgaaaatgcacccaatgatg 14301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 68 - 390
Target Start/End: Original strand, 14304581 - 14304906
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaa 165  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||| |||||   ||||||| |||| |||||||||| |||||||  | ||||||||    
T  14304581 atcaagtccccttaatgggcctaactctcaaacttaatggatttaacccatttcaactcacatctaaaatgtttctacacacacaacgacaattcactaa 14304680  T
Q  166 taacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaatt 263  Q
    ||||||| |||||||| ||||| ||||| ||| |||||||||| |||||||  ||||| ||||||||||||||  | ||||| ||    ||| || || |    
T  14304681 taacggttaattaacgataaaatatcaccaacagtcactaaacggtaaaatactaattattactctagtaactcggtaaaactaatggctctcaccaaat 14304780  T
Q  264 cacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacg 363  Q
       |||| ||||||||| | |||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  14304781 actaaaaataattctcatc-aaacttataa-ttcacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacg 14304878  T
Q  364 gaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||| ||||||||||||| |||||||||    
T  14304879 gaaacccatgaaaatgcatccaatgatg 14304906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 15856882 - 15856669
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  15856882 taacggtaaaatgtcactaacggtcgctaaacagtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 15856784  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |   |||||| ||||| |||||||    
T  15856783 tcccaccaaaa-ttataatttaacccgttctcacaaaatgactaaaatacccctaagtccaaaatgactaaaataccctcctaacatggaaacccatgaa 15856685  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||| ||||    
T  15856684 aatgcacccaaagatg 15856669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 7854624 - 7854811
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaa------caactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccg 302  Q
    ||||||||||| |||||||||||||||| || ||||      ||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||    
T  7854624 gtaaaatcttagttttactctagtaactaagtaaaagtaaaacaactattcttactaac-cactaaaagtaactctcaccaaaacttataattttacccg 7854722  T
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  7854723 ttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 7854811  T

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Target: chr3; HSP #18
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 200 - 390
Target Start/End: Original strand, 13836278 - 13836468
Alignment:
Q  200 tcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttta 298  Q
    ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||   ||| |||||||| | |||||||||||||||||||||    
T  13836278 tcactaaacggtaatatcttaattttactctagtaacttagtaaaacaactattctcactagc-cactaaaagtaactttcaccaaaacttataatttta 13836376  T
Q  299 cccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |  |||||||||| ||||||||||||| || ||||||||||||||||||||| |  |||||||| |||||||||||| |||| |||||||||    
T  13836377 cttgttctcacaaaatgaccaaaatactccgaagtccaaaatgactaaaatacccttctaacacagaaaccatgaaagtgcatccaatgatg 13836468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 19260468 - 19260256
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  19260468 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 19260371  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || ||  ||||||||| |||||||    
T  19260370 tcccactaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaataccattcccacacggaaacccatgaa 19260272  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  19260271 aatgcacccaatgatg 19260256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 16995657 - 16995476
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| | || ||| ||| ||||||||||| |||||||| |||||||||||  ||||||||    
T  16995657 gtaaaatcttagttttactctagtaacttagtaaaataactattttcaccaat-cactaaaagtaattcccaccaaaaattataattttattcgttctca 16995559  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||| |||||||||||||||||||||    
T  16995558 caaaatgaccaaaatacccctacgtccaaaatgactaaaatacccttctaacacggaaacctatgaaaatgcacccaatgatg 16995476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 19232406 - 19232616
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||  ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  19232406 taacggtaaaatgtcactaacggtcactaaatggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 19232503  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  19232504 tcccaccaaaa-ttataattttacccgttctcacaaaataaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaa 19232602  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  19232603 aatgcacccaatga 19232616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 45582250 - 45582462
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||| ||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  45582250 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actatagtaacttaatgaaataactattctcactaat-cactaaaagtaat 45582347  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |  | ||||||||||| |||||||    
T  45582348 tctcacccaaaattataattttacc-gttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttataacacggaaacccatgaa 45582446  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  45582447 aatgcacccaatgatg 45582462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 51960749 - 51960535
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||| |||||  ||||||||| || |||||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  51960749 taacggtaaaatgtcactaacggtctctaaatggtaaaatctcaactttactctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 51960651  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| |||||||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  51960650 tctcacccaaaattataattctacccgttctcaccaaatgaccaaaatacccttaagtctaaaatgactaaaatatccttctaacacggaaacccatgaa 51960551  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  51960550 aatgcacccaatgatg 51960535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 3993187 - 3993400
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||||||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  3993187 taacggtaaaatgtcactaacagtcactaaacagtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 3993284  T
Q  276 tctcaccaaaacttataatttt-acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatga 373  Q
    || |||||||| | |||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||||||    
T  3993285 tcacaccaaaaat-ataatttttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatga 3993383  T
Q  374 aaatgcacccaatgatg 390  Q
    |||||||| ||||||||    
T  3993384 aaatgcacacaatgatg 3993400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 12029811 - 12029598
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||||||||||  |||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  12029811 taacggtaaaatgtcactaacggtcactaaacgataaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 12029714  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||| ||||||| |  | ||||||||||| |||||||    
T  12029713 tctcacccaaaattataattttacccgttctcacaaaatgacgaaaatacccttaagtctaaaatgattaaaatacccttataacacggaaacccatgaa 12029614  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  12029613 aatgcacccaatgatg 12029598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 22143903 - 22143726
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||   ||| ||||||  |||||||| ||||||||||| ||||||||||    
T  22143903 gtaaaatcttagttttactctagtaacttagtaaaataactattctcactaattactaaaggtaattgccaccaaaa-ttataattttatccgttctcac 22143805  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    || | |||||||||||||||||||||||||||||||||||| |  |||| |||||||| |||||||||||||||||||||    
T  22143804 aa-aagaccaaaatacccctaagtccaaaatgactaaaatacccttctatcacggaaatccatgaaaatgcacccaatga 22143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 33342514 - 33342726
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| |||  ||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| |  ||||||||||    
T  33342514 taacggtaaaatgtcactaacgatcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaatccttaaaagtaatt 33342612  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaa 375  Q
    |  ||||||| |||||||||||||||||||||||| |||| |||||||||| |||||| |||| |||||||||| |  |||||||||||||| |||||||    
T  33342613 cctaccaaaaattataattttacccgttctcacaa-atgatcaaaatacccttaagtctaaaacgactaaaatacccttctaacacggaaactcatgaaa 33342711  T
Q  376 atgcacccaatgatg 390  Q
    |||||||||||||||    
T  33342712 atgcacccaatgatg 33342726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 159 - 390
Target Start/End: Complemental strand, 14527696 - 14527464
Alignment:
Q  159 tcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattctta 257  Q
    ||||||||||||||||  ||||||||||| ||||| |||  ||||||| | ||||||| |||| || || |||||||||||||  |||| ||  |||| |    
T  14527696 tcactaataacggtcacataacggtaaaatatcaccaacgatcactaatcggtaaaatattaacttctaatctagtaacttagttaaacgacggttctca 14527597  T
Q  258 ctaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactct 357  Q
    |||| |   |||||||||||||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||  || |  |||    
T  14527596 ctaaatactaaaagtaattctcaccaaaacttataattt-acccattctcacaaaatgatcaaaatacccctaagtccaaaatgactaatttacccttct 14527498  T
Q  358 aacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||| ||| |||||||||||||||||||||||    
T  14527497 aacacgaaaacccatgaaaatgcacccaatgatg 14527464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 50111814 - 50111456
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||  | |        ||||||| ||||||||||||||||| ||| || ||||||||||||    
T  50111814 aatatcttatgaaatgaaagtgtgaggaaatttctcataagacca-ggtttttatatcaagttcccttaatgggcctaactctctacttaatggacttaa 50111716  T
Q  113 ccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || | |||| |||| |||||||  |||||||||| |||||||||| ||||||||||||||           ||||| ||||| ||| ||               
T  50111715 cccaattctattcaaatcaaaaatgtttctacacacacaacggtaattcactaataacgg-----------taaaatatcaccaacggt----------- 50111638  T
Q  212 aaaatcttaatt--ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||| |||||||  |||| |||||||| ||| ||||||||  |||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  50111637 aaaaccttaattatttaccctagtaacatagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacttataa-tttacccgttctca 50111540  T
Q  309 caatatgaccaaaata-cccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    | | |||| ||||||| ||||||| |||||||||||||||||| || |||||| || ||| |||||||||||||||||||||||    
T  50111539 ccaaatgatcaaaataccccctaaatccaaaatgactaaaataccattctaactcgtaaacccatgaaaatgcacccaatgatg 50111456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 5240346 - 5240133
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| | ||| ||| |||||||||| ||||||||| ||||| |||| |||||||||   ||| || |||||| |||||| ||| |||||||||    
T  5240346 taacggtaaaataccactaacggtcactaaacggtaaaatctcaattt-actcaagtaacttaatgaaataattattctcactaat-cactaaaagtaat 5240249  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaa 374  Q
    || ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |  ||  |||||||||| ||||||    
T  5240248 tcccactaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtttaaaatgactaaaatacccttcccacacggaaactcatgaa 5240149  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  5240148 aatgcacccaatgatg 5240133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 54684934 - 54684721
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||  ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| || |||||| |||||| ||| |||||||||    
T  54684934 taacggtaaaatgtcattaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataattattctcactaat-cactaaaagtaat 54684837  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||| |  | |||||||||||| ||||||    
T  54684836 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaacgactaaaatacccttataacacggaaactcatgaa 54684737  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||| ||||    
T  54684736 aatgcacccaacgatg 54684721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 2844827 - 2845038
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||  ||||||||| ||||||    ||||||||||    
T  2844827 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaat-aactattctcactaatcgctaaaagtaatt 2844924  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    | |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||| |  ||||||||||||| ||||||||    
T  2844925 cccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaa-gactaaaatacccttctaacacggaaacccatgaaa 2845023  T
Q  376 atgcacccaatgatg 390  Q
    ||||||| |||||||    
T  2845024 atgcaccaaatgatg 2845038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 81 - 390
Target Start/End: Complemental strand, 53898290 - 53897982
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaa 179  Q
    ||||||| ||||||||||| |||||||||||||| |||||| |||| |||||||  |||||||| | |||||||||| ||||||||||| |||| | |||    
T  53898290 aatgggcataaccctcaacttaatggacttaacccatttctattcaaatcaaaaatgtttctacccacacaacggtaattcactaataatggtcgaataa 53898191  T
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattc 277  Q
    |||||||||||||| ||| ||||||||||  |||||| | |||| |||||||||||||   | ||||| ||  ||||  ||||| | || ||| ||||||    
T  53898190 cggtaaaacatcaccaacggtcactaaacgataaaatatcaattattactctagtaacccggtaaaactaatgattcccactaaat-actaaa-taattc 53898093  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    ||||||||   |||||| || | |||||||| || |||||||||||||||||||| | ||||||||||||||| |  ||||||||| ||| |||||||||    
T  53898092 tcaccaaa--ctataatctt-ctcgttctcataaaatgaccaaaatacccctaagcctaaaatgactaaaatatccttctaacacgaaaatccatgaaaa 53897996  T
Q  377 tgcacccaatgatg 390  Q
    |||||| |||||||    
T  53897995 tgcaccaaatgatg 53897982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 2050430 - 2050643
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||   ||| ||| ||| |||||| ||||| ||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  2050430 taacggtaaaatgccactaacggtcgctaaacggtaaagtctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 2050527  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |  |||||||| ||||||||||||  |||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  2050528 ttccaccaaaaattataattttacatgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 2050627  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  2050628 aatgcacccaatgatg 2050643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 17522653 - 17522273
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaa-cctaatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||  | |        |  | ||||||| ||||||||||||||| || | |||||||||||    
T  17522653 aatatcttatgaaatgaaagtgtgaggaaatttcctctaaga-caaggtttttataggatgtcccctaaatgggcctaaccctaaagcttaatggactta 17522555  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||     ||| ||| |||| |||| ||||| || ||||| |  ||||||| ||||||||| |||||||||||    || ||| |||||| ||| |    
T  17522554 acccattctaactcaaatctaaaatgtttttacacacataacggcaaatcactaagaacggtcaaataacggtaaaattctaccaacggtcacttaacgg 17522455  T
Q  211 taaaatcttaattt-tactctagtaacttag-gaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||||| ||||||| ||  ||||||||||||  ||||| ||  |||| ||||| |   |||| ||||||||||||| |||||||| ||||||||||||||    
T  17522454 taaaatattaatttctaacctagtaacttagtaaaaacgacggttctcactaaatactaaaaataattctcaccaacacttataa-tttacccgttctca 17522356  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| ||||||||||||||||||| ||||||||||||||| || |  ||||||||||||| ||||||||| |||||||||||||    
T  17522355 caaaatgaccaaaatacccctaaatccaaaatgactaaagtacccttctaacacggaaatccatgaaaaggcacccaatgatg 17522273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 199 - 389
Target Start/End: Original strand, 19947355 - 19947546
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt 297  Q
    |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||  |||||||| ||||||||||    
T  19947355 gtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaatttccaccaaaaattataatttt 19947452  T
Q  298 -acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
     |||||||||||||| |||||||||||||||||||||| ||| |||||||||||    ||||||||||||| ||||||||||||| ||||||||    
T  19947453 tacccgttctcacaaaatgaccaaaatacccctaagtctaaattgactaaaatactcttctaacacggaaacccatgaaaatgcatccaatgat 19947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 181 - 388
Target Start/End: Complemental strand, 54037733 - 54037526
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctc 279  Q
    |||||||  |||| ||| ||||||||||  |||||||| ||||| ||||||||||||||   ||| ||||||| | | |||  ||| ||||||||||| |    
T  54037733 ggtaaaatgtcactaacggtcactaaacgttaaaatctcaattt-actctagtaacttaatgaaataactattatcaataaa-cactaaaagtaattccc 54037636  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatg 378  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||| |  ||||||||||||| |||||||||||    
T  54037635 accaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaaatctaaaatgactaaaatacccttctaacacggaaacccatgaaaatg 54037536  T
Q  379 cacccaatga 388  Q
    ||||||||||    
T  54037535 cacccaatga 54037526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 179 - 390
Target Start/End: Original strand, 55513510 - 55513720
Alignment:
Q  179 acggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattc 277  Q
    |||||||||  |||| ||| |||||||||| |||||| |  ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||    
T  55513510 acggtaaaatgtcactaacggtcactaaacggtaaaaccacaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattc 55513607  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    ||||| ||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||| |  ||||| | ||||| |||||||||    
T  55513608 tcacccaaaattataattttaccccttctcacaaaatgaccaaaatacccctaagtctaaaa-gactaaaatacccttctaatatggaaacccatgaaaa 55513706  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  55513707 tgcacccaatgatg 55513720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 17955590 - 17955409
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||||| ||||||||||| ||||||   ||| |||||||||  ||| | ||| ||||||||||||||| |||| ||||||||||||||||||||     
T  17955590 gtaaaatcttagttttactctagaaacttaatgaaataactattctcgctagt-cactaaaagtaattctcactaaaaattataattttacccgttctcg 17955492  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    | | |||||||||||||||||||||||||||||||||||||| |  |||||||| |||| |||||||||| ||| ||||||||    
T  17955491 cgaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatacactcaatgatg 17955409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 200 - 390
Target Start/End: Original strand, 13839532 - 13839722
Alignment:
Q  200 tcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt- 297  Q
    ||||||||| ||||||| | ||||| |||||||||||| |   ||| ||||||||| |||||| ||| ||||||||||| |||||||| ||||||||||     
T  13839532 tcactaaacggtaaaatatcaattt-actctagtaactaaatgaaataactattctcactaat-cactaaaagtaattcccaccaaaaattataattttt 13839629  T
Q  298 acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| ||||||||||||||| |||||| |||| |||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  13839630 acccgttctcacaaaatgaccaaaatacccttaagtctaaaa-gactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 13839722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 136 - 390
Target Start/End: Complemental strand, 11060647 - 11060392
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagta 234  Q
    |||||||||| | ||||||||  |||||||||||| ||||||||||||||||  | || ||| |||||||||| ||||||| ||||||  ||||||||||    
T  11060647 gtttctacacacccaacggtaaatcactaataacgatcaattaacggtaaaattttaccaacggtcactaaacggtaaaatattaattactactctagta 11060548  T
Q  235 acttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagt 333  Q
    |||||| |||| |||  |||| |||||  ||| |||| ||||||||||||||| ||||||||| |||||| ||    | ||||||||||||||| |||||    
T  11060547 acttagtaaaataacggttctcactaaa-cactaaaaataattctcaccaaaatttataattt-acccgtacttgtgaaatgaccaaaatacccttaagt 11060450  T
Q  334 ccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| ||    |||||| || ||| |||||||||| ||||||||||||    
T  11060449 ccaaaatgactaaattactcttctaacgcgaaaacccatgaaaatacacccaatgatg 11060392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 30153628 - 30153750
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtc-caaaatgactaaaataacactctaacacgga 365  Q
    ||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||| || ||||||  ||||||||||||||| |  |||||||||||    
T  30153628 aaaagtaattcccaccaaaa-ttataattttacccgttcacacaaaatgaccaaaatatccttaagtctaaaaatgactaaaatacccttctaacacgga 30153726  T
Q  366 aa-ccatgaaaatgcacccaatga 388  Q
    || |||||||||||||||||||||    
T  30153727 aacccatgaaaatgcacccaatga 30153750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 28558809 - 28558957
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||  ||||| ||  |||| |||||| ||| |||||||||    
T  28558809 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaataaaaccacggttctcactaat-cactaaaagtaat 28558906  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    || |||||||| | |||||||||||||||||||||| |||||||||||||||    
T  28558907 tcccaccaaaaat-ataattttacccgttctcacaaaatgaccaaaataccc 28558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 390
Target Start/End: Original strand, 3578809 - 3578920
Alignment:
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaat 377  Q
    |||||||| ||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||||||||| || |  ||||||||| ||| ||||||||||    
T  3578809 caccaaaatttataattt-actcgttctcacaaaatggccaaactacccctaagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaat 3578907  T
Q  378 gcacccaatgatg 390  Q
    |||||||||||||    
T  3578908 gcacccaatgatg 3578920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 17912117 - 17911986
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||||||||  | |||||||| | ||||||||||||||||||| |||| ||||||||| ||||| |||| |||||||||    
T  17912117 taacggtaaaatgtcactaacggtcactaacga-taaaatctaagttttactctagtaacttagtaaaataactattctcactaa-tcactaaaagtaat 17912020  T
Q  276 tctcaccaaaacttataattttacccgttctcacaa 311  Q
    ||||||||||  ||||||||||||||||||||||||    
T  17912019 tctcaccaaa--ttataattttacccgttctcacaa 17911986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 137 - 390
Target Start/End: Original strand, 40939735 - 40939988
Alignment:
Q  137 tttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaa 235  Q
    |||||| || |||||||||| |||||||||||||||||||||||||||||| |  || ||| |||||||||| ||| |||  ||||   |||||| ||||    
T  40939735 tttctatacacacaacggtaattcactaataacggtcaattaacggtaaaatactaccaacggtcactaaacggtataatactaatcactactctggtaa 40939834  T
Q  236 cttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtcc 335  Q
    ||||| |||| |||  || | |||||  ||| ||| ||||||| | |||  ||  ||||||| ||| | ||| | | ||||||||||||||| |||||||    
T  40939835 cttagtaaaataacggttttcactaaaccactaaaataattctaatcaat-ctattaatttt-cccatactcgcgacatgaccaaaatacccttaagtcc 40939932  T
Q  336 aaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||| || |  |  |||||||||| |||||||||||||||||||||||    
T  40939933 aaaatgactaaattacccttacaacacggaaacccatgaaaatgcacccaatgatg 40939988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 39657308 - 39657386
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || | |||||||||||||| |||||||||||||||||||||||    
T  39657308 atgaccaaaatacccctgagtccaaaatgactaaattacccctctaacacggaaatccatgaaaatgcacccaatgatg 39657386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 30207702 - 30207909
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||| |        | ||||||||||||||||||||||| |||||| ||  | ||||||    
T  30207702 aatatcttatgaa-tgaaagtgtgtggaaatttctcataagtgta-ggtttttataccaagtccccttaatgggcctaactctcaacttatagaacttaa 30207799  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||| ||||||||  ||| |||||||||| |  ||||||| |||||||| ||||||||| ||||||||||| ||||  ||  |||||| ||| ||    
T  30207800 cccatttctattcacatctcaaatgtttctacactc-taacggtaattcactaacaacggtcaaataacggtaaaatatcaacaatggtcacttaacggt 30207898  T
Q  212 aaaatcttaat 222  Q
    ||||| |||||    
T  30207899 aaaatattaat 30207909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 16995762 - 16995652
Alignment:
Q  78 cttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaat 176  Q
    |||| |||||||||||||| || |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| || |||||||||||||||     
T  16995762 cttattgggcctaaccctccacttaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacggtcaag 16995663  T
Q  177 taacggtaaaa 187  Q
    |||||||||||    
T  16995662 taacggtaaaa 16995652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 55440334 - 55440256
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||| ||||||||||||||||||| || |  |||||||| |||| |||||||||||||||||||||||    
T  55440334 atgaccaaaatacccttaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatg 55440256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 11328493 - 11328369
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||  | ||||| | |   | ||| ||||||||||||||||| ||||||||||||||||| || |  ||||||||| ||    
T  11328493 aaaagtaattctcaccaaaaattactaatttacgcttatacccaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaa 11328394  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | ||||||||||||| |||||||||    
T  11328393 acccatgaaaatgcaaccaatgatg 11328369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 271 - 390
Target Start/End: Complemental strand, 12487303 - 12487183
Alignment:
Q  271 gtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-cc 369  Q
    |||||||||||||||| |||  | ||||| | | | | ||| ||||||||||||||| | ||||||||||||||||| || |  || |||||||||| ||    
T  12487303 gtaattctcaccaaaagttactaatttacgcttacacccaaaatgaccaaaatacccttgagtccaaaatgactaaattacccttcaaacacggaaaccc 12487204  T
Q  370 atgaaaatgcacccaatgatg 390  Q
    |||||||| ||||||||||||    
T  12487203 atgaaaattcacccaatgatg 12487183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 17586434 - 17586343
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    ||||||| | ||||||| |||| |||||||||||| ||||||||||||||||| || |  ||||||||| ||| |||| |||||||||||||    
T  17586434 tttacccttactcacaaaatgatcaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaa 17586343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 390
Target Start/End: Original strand, 48422221 - 48422414
Alignment:
Q  199 gtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattt 296  Q
    |||||| ||| ||||||| ||||||  ||| |||||||||||| |||| |||  |||| |||||  ||| |||||||||||||||||||| |||  | ||    
T  48422221 gtcacttaacggtaaaatattaattactaccctagtaacttagtaaaataacggttctcactaac-cactaaaagtaattctcaccaaaagttactaatt 48422319  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||  | | | | ||| | || |||||||||||| ||||||||||||||||| || |  |||||||| |||| |||||||||||||| ||||||||    
T  48422320 taatcttacactcaaaaagatcaaaatacccctgagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcactcaatgatg 48422414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 13836158 - 13836219
Alignment:
Q  70 caagtccccttaatgggcctaaccctc-aacctaatggacttaaccaatttcttttcacatc 130  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| |||||| ||||||||    
T  13836158 caagtccccttaatgggcctaactctcaaacttaatggacttaacccatttctattcacatc 13836219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 16262104 - 16262224
Alignment:
Q  206 aacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttc 305  Q
    |||||||||||||  | ||| |||||||||||||   ||| ||| | ||| |||||||   ||||| |||||||||| |||  |||||||||||||||||    
T  16262104 aacagtaaaatctcgacttt-ctctagtaacttaatgaaataaccaatctcactaattactaaaagcaattctcacccaaaactataattttacccgttc 16262202  T
Q  306 tcacaatatgaccaaaataccc 327  Q
    |||||| || ||||||||||||    
T  16262203 tcacaaaattaccaaaataccc 16262224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 17912203 - 17912142
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttct 141  Q
    |||||||||||||||  |||||||||||||||||| |||||| |||||||| ||| ||||||    
T  17912203 taatgggcctaacccaaaacctaatggacttaacccatttctattcacatccaaatgtttct 17912142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 55193422 - 55193495
Alignment:
Q  318 caaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||||||||||| |  | |||||||||| ||| ||||||| ||||| |||||||||    
T  55193422 caaaatacccctaagtccaaaatgactaaatttcccctctaacacgaaaacccatgaatatgcatccaatgatg 55193495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 8605564 - 8605659
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgat 389  Q
    ||||||| | ||||||| ||||||||||||| | | |||||||||||| |||| || |  ||||||||| |||| ||| |||||||||||||||||    
T  8605564 tttacccttactcacaaaatgaccaaaatactcatgagtccaaaatgattaaattacccttctaacacgaaaactcattaaaatgcacccaatgat 8605659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 19431630 - 19431685
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  19431630 tttacccttgctcgcaaaatgaccaaaatacccctaagtacaaaatgactaaaata 19431685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 54652074 - 54652183
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcaca-aaagtaattctcaccaaaacttataatttt 297  Q
    |||| ||||| ||||||||| ||||| ||||||||||||||   ||| ||||||| |||||| | |||  |||||||||| ||| |||| ||||||||||    
T  54652074 gtcattaaaccgtaaaatctcaattt-actctagtaacttaatgaaataactatttttactagt-cactcaaagtaattcccactaaaaattataatttt 54652171  T
Q  298 acccgttctcac 309  Q
    ||||||||||||    
T  54652172 acccgttctcac 54652183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 12559709 - 12559627
Alignment:
Q  306 tcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatga 388  Q
    |||||| ||||| ||||||||||| | ||||||||||||||| || |  ||||||||| ||||||   |||||||||||||||    
T  12559709 tcacaaaatgacaaaaatacccctgaatccaaaatgactaaattacccttctaacacgaaaaccaatgaaatgcacccaatga 12559627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 14058704 - 14058634
Alignment:
Q  313 atgaccaaaatacccctaagt-ccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcac 381  Q
    ||||||||||||||||||||| |||||||||||||| || |  | ||||||||||| ||||||||||||||    
T  14058704 atgaccaaaatacccctaagtcccaaaatgactaaattacccttttaacacggaaatccatgaaaatgcac 14058634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 327
Target Start/End: Complemental strand, 2448868 - 2448752
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||||||  ||||| |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | |||||    
T  2448868 gtaaaatctcgatttt-ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcac 2448770  T
Q  310 aatatgaccaaaataccc 327  Q
    || || ||||||||||||    
T  2448769 aaaattaccaaaataccc 2448752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 12349034 - 12349001
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  12349034 aatatcttatgaaatgaaagtgtgaggaaatttc 12349001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 15044721 - 15044664
Alignment:
Q  293 attttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||||| | ||||| | ||||||||||||||||| |||| |||||||||||||||    
T  15044721 attttacccttgctcaccaaatgaccaaaatacccctgagtctaaaatgactaaaata 15044664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 15521727 - 15521804
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||| ||| ||| |||||||||||||  |||||||    
T  15521727 atgaccaaaataccccttagtccaaaatgactaaattacccttctaatacgaaaacccatgaaaatgcattcaatgat 15521804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 55440622 - 55440589
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  55440622 aatatcttatgaaatgaaagtgtgaggaaatttc 55440589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 390
Target Start/End: Original strand, 28558939 - 28558995
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    ||||||||| |||||| |  ||||||||||||||| |||||||||||||||||||||    
T  28558939 caaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 28558995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 55192629 - 55192685
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||| |||||||||| || |||||||  |||||||||||||||| ||||||||||||    
T  55192629 aaaatgtttctacacacataacggtaaatcactaataacggtcacttaacggtaaaa 55192685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 3578693 - 3578744
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||||||||| ||||||||||  |||| ||||||||||| ||||||||||||    
T  3578693 gtttctacacacacaacggtaaatcacaaataacggtcatttaacggtaaaa 3578744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 12348977 - 12348918
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc 130  Q
    ||||| ||||| |||||||||||||| || |||||||||||| | |||||| ||||||||    
T  12348977 aagtctccttattgggcctaaccctccacttaatggacttaatccatttctattcacatc 12348918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 13839422 - 13839488
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaattt-cttttcacatcaaaaggtttctacac 145  Q
    |||||||||||||||  |||||||||||||||||| |||| || | || ||||||| ||||||||||    
T  13839422 taatgggcctaacccaaaacctaatggacttaacccatttgctatccaaatcaaaatgtttctacac 13839488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 17939048 - 17939082
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttct 47  Q
    |||||||| ||||||||||||||||||||||||||    
T  17939048 aatatcttgtgaaatgaaagtgtgaggaaatttct 17939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 267 - 309
Target Start/End: Complemental strand, 18896608 - 18896566
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||    
T  18896608 aaaagtaattcccactaaaaattataattttacccgttctcac 18896566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 38810473 - 38810395
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||| |||||||||| | ||| ||||||||||||| || |  ||||| ||||||| ||||||||||||||| |||||||    
T  38810473 atgatcaaaatacccatgagttcaaaatgactaaattacccttctaatacggaaacccatgaaaatgcaccaaatgatg 38810395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 7854532 - 7854625
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaa-ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggt 172  Q
    |||||||||||||||  ||||||||| |||||| ||| ||||| |||| | ||||| ||||||||||  | || |||| || ||||||||||||    
T  7854532 taatgggcctaacccaaaacctaatgaacttaacccattttctattcaaaccaaaatgtttctacactaaaaaaggtaattaactaataacggt 7854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 12252255 - 12252198
Alignment:
Q  293 attttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||||| |||| | || ||||||||||||||||| |||| |||| ||||||||||    
T  12252255 attttaccctttcttataaaatgaccaaaatacccctgagtctaaaacgactaaaata 12252198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 17101190 - 17101239
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttc 120  Q
    ||||| ||||| ||||||||||||||||| | |||||||||||| |||||    
T  17101190 aagtctccttattgggcctaaccctcaacttgatggacttaacccatttc 17101239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 350
Target Start/End: Original strand, 17394102 - 17394147
Alignment:
Q  305 ctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| ||||||||||||||||| | |||||||||| |||||||    
T  17394102 ctcacaaaatgaccaaaatacccctgaatccaaaatgattaaaata 17394147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34439106 - 34439061
Alignment:
Q  13 aatatctta-tgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||||||| |||||||||||||||||||||||||| ||||| |||    
T  34439106 aatatcttagtgaaatgaaagtgtgaggaaatttctcataagtgta 34439061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 40939610 - 40939643
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||| |||||||||||||||||||||||||    
T  40939610 aatatcttgtgaaatgaaagtgtgaggaaatttc 40939643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 328
Target Start/End: Original strand, 41270699 - 41270799
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  41270699 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaa-ttataattttacccatcctcacaaaattaccaaaatacc 41270797  T
Q  327 cc 328  Q
    ||    
T  41270798 cc 41270799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 161; Significance: 2e-85; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 85 - 390
Target Start/End: Complemental strand, 131944 - 131637
Alignment:
Q  85 ggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggt 183  Q
    ||||||| ||||||||| |||||||||||| |||||| ||||  ||  ||| ||||||||||  ||||||||||||||||||||||||| || |||||||    
T  131944 ggcctaatcctcaacctcatggacttaacccatttctattcaactcgcaaatgtttctacacatacaacggtatttcactaataacggttaaataacggt 131845  T
Q  184 aaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcacc 282  Q
    ||||  ||||  || |||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||| |||||| ||| ||||||||||||||||    
T  131844 aaaatgtcaccgacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattctcacc 131746  T
Q  283 aaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcac 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |  | |||||||| ||||||||||||||    
T  131745 aaaacttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttacaccacggaaacccatgaaaatgcac 131646  T
Q  382 ccaatgatg 390  Q
    |||||||||    
T  131645 ccaatgatg 131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 131 - 390
Target Start/End: Original strand, 12655 - 12915
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| ||||||||||  |||||||||||| ||||||||||||||||    || ||| |||| | ||| ||||||| ||||||  || ||    
T  12655 aaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcagttaacggtaaaatattaattactaatc 12754  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    ||||||||||| |||| |||  |||| |||||  ||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  12755 tagtaacttagtaaaataacggttctcactaaa-cactaaaaataattctcaccaaaacttataattt-acccgttctcacaaaatgaccaaaatacccc 12852  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||| || |   |||||||||||| |||||||||||||||||||||||    
T  12853 aaagtccaaaatgactaaattaccctgctaacacggaaacccatgaaaatgcacccaatgatg 12915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 131 - 390
Target Start/End: Original strand, 26033 - 26293
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| ||||||||||  |||||||||||| ||||||||||||||||    || ||| |||||| ||| ||||||| ||||||  || ||    
T  26033 aaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcacttaacggtaaaatattaattactaatc 26132  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    | ||||||||| |||| |||  |||| |||||  ||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  26133 tcgtaacttagtaaaataacggttctcactaaa-cactaaaaataattctcaccaaaacttataattt-acccgttctcacaaaatgacctaaatacccc 26230  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||| || |  |||||||| |||| |||||||||||||||||||||||    
T  26231 taagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatg 26293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 131 - 390
Target Start/End: Original strand, 16502 - 16762
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| ||||||||||  |||||||||||| ||||||||||||||||    || ||| |||||| ||| ||||||| ||||||  || ||    
T  16502 aaaatgtttctacacacacaacggtaaatcactaataacgatcaattaacggtaaaattctaccaacggtcacttaacggtaaaatattaattactaatc 16601  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    | ||||||||| |||| ||   |||| |||||  ||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  16602 tcgtaacttagtaaaataaaggttctcactaaa-cactaaaaataattctcaccaaaacttataattt-acccgttctcacaaaatgacctaaatacccc 16699  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||| || |  |||||||| |||| |||||||||||||||||||||||    
T  16700 taagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatg 16762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 16383 - 16416
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||| |||||||||||||||||||||||||    
T  16383 aatatcttgtgaaatgaaagtgtgaggaaatttc 16416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 25914 - 25947
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||| |||||||||||||||||||||||||    
T  25914 aatatcttgtgaaatgaaagtgtgaggaaatttc 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 154; Significance: 3e-81; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 11471 - 11095
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| |||||||||| |||| ||||| ||||||||| |        ||||||||||||||||||||||||| | | || ||||||||||||    
T  11471 aatatcttatgaa-tgaaagtgtgtggaattttctcataagagtatgtttttat-atcaagtccccttaatgggcctaactcaccacttaatggacttaa 11374  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    || |||||| |||| | ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||  |||| ||| |||||||||| |||    
T  11373 cccatttctattcaaaccaaaatgtttctacgcccacaacggtatttcactaataacggtcaa-taacggtaaaatgtcaccaacggtcactaaacggta 11275  T
Q  213 aaatcttaat--tttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||| ||||  ||||||||||| |||||| |||| |||  || | ||||| |||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  11274 aaatcctaattatttactctagtgacttagtaaaataacggttttcactaa-tcactaaaagtaattctcaccaaaactcataa-tttacccgtactcac 11177  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || ||||||||||||||||||||||||| ||||||||| || || ||||||||| ||| |||||||||||||||||||||||    
T  11176 aaaatgaccaaaatacccctaagtccaagatgactaaattaccattctaacacgaaaacccatgaaaatgcacccaatgatg 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 154; Significance: 3e-81; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 24491 - 24112
Alignment:
Q  13 aatatctta-tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggactta 111  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| |         | ||||| ||||| |||||||||||||| || |||||||||||    
T  24491 aatatcttagtgaaatgaaagtgtgaggaaatttctcataagagtaggtttttatact-aagtctccttattgggcctaaccctccacttaatggactta 24393  T
Q  112 accaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| |||| | |||||  |||||||||| |  | ||||| || ||||||||||||||| |||||||||||  |||| ||| |||||||||| |    
T  24392 acccatttctattcaaaccaaaaatgtttctacactctaaccggtaattaactaataacggtcaagtaacggtaaaatgtcacgaacggtcactaaacgg 24293  T
Q  211 taaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    || ||||||||||||||||||||||||||| ||| ||||  |||| |||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  24292 tagaatcttaattttactctagtaacttagtaaaccaacggttctcactaat-cactaaaagtaattctcacaaaaaattataattttacccgttctcac 24194  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || ||||||||||||||||||||| ||| |||||||||||| |  ||||||||||||| ||||| |||||||||||||||||    
T  24193 aaaatgaccaaaatacccctaagttcaatatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatgatg 24112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 97584 - 97675
Alignment:
Q  300 ccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  97584 ccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 97675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 154; Significance: 3e-81; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 13 - 368
Target Start/End: Original strand, 23174 - 23527
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||| |        | |||||| |||||||||||||||| |||||| ||||||||||||    
T  23174 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtctccttaatgggcctaactctcaacttaatggacttaa 23271  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
     | |||||  |||||||| |||| |||||||||| |  | ||||| ||||||||||||||| || ||||||||||| ||||| ||  |||||||||| ||    
T  23272 tccatttcgattcacatctaaaatgtttctacactctaaccggtaattcactaataacggtaaaataacggtaaaatatcactaatggtcactaaacggt 23371  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  23372 aaaatcataattttactctagtaacttagtaaaacaactattcttactaa-ccactaaaagtaactctcaccaaaacttataattttactcgttctcaca 23470  T
Q  311 atatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac 368  Q
    | | |||||||||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  23471 a-aagaccaaaatacccctaagtccaaaatgactgaaatacccttctaacacggaaac 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 183 - 389
Target Start/End: Original strand, 35564 - 35770
Alignment:
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcac 281  Q
    ||||| ||||| ||| |||||||||| |||||||||||||||||||| ||||||||||  |||||| ||||||||||||  ||| |||||||| | ||||    
T  35564 taaaatatcactaacggtcactaaacggtaaaatcttaattttactcgagtaacttagttaaacaaatattcttactaa-ccactaaaagtaactttcac 35662  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgca 380  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||| |  |||||||||||||| ||  ||||||||    
T  35663 caaaacttataattttatccgttctcacaa-aagaccaaaatacccctaagtcaaaaatgactaaaatacccttctaacacggaaactcacaaaaatgca 35761  T
Q  381 cccaatgat 389  Q
    |||||||||    
T  35762 cccaatgat 35770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 127823 - 127610
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||||| |||| ||||| ||| ||||| ||||||||||||||   ||| ||||||||  || ||| ||| |||||||||    
T  127823 taacggtaaaatgtcactaacggtcacaaaacggtaaagtctcaattt-actctagtaacttaatgaaataactattcacaccaat-cactaaaagtaat 127726  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  ||||| ||||||| |||||||    
T  127725 tctcccccaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaatacggaaacccatgaa 127626  T
Q  375 aatgcacccaatgatg 390  Q
    |||||| |||||||||    
T  127625 aatgcatccaatgatg 127610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 153; Significance: 1e-80; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 5 - 390
Target Start/End: Complemental strand, 6619 - 6234
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| || |  ||| |         ||||||| |||||||| ||||||||||| || ||||    
T  6619 tctccaaaaatatcttatgaa-tgaaagtgtgaggaaatttctcatgaatgta-ggtttttatgtcaagtctccttaatgtgcctaaccctccacataat 6522  T
Q  105 ggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcac 203  Q
    |||||||||| ||||||  ||| | | |||| |||||||||| |  | ||||| |||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  6521 ggacttaacccatttctagtcaaaccaaaaatgtttctacactctaaccggtaattcactaataacggtcaagtaacggtaaaatatcactaacggtcac 6422  T
Q  204 taaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccg 302  Q
    ||||| |||||||||||||||||||||| || ||||| ||||||||  |||| |||||  ||| |||| ||||||||||||||||||||||||||| |||    
T  6421 taaacggtaaaatcttaattttactctaataccttagtaaaacaacggttctcactaa-ccactaaaattaattctcaccaaaacttataattttatccg 6323  T
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| ||||| |||||||| ||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  6322 ttcgcacaaaatgaccaagatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 6234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 520 - 223
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||  ||| |||||||||| |  |   ||  |||||||||||||||||| |        
T  520 tgggcctaaccctcaacctaatggacttaacccatttctattcacatctcaaatgtttctacactccaagtagtgattcactaataacggtcaaatg--- 424  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
            |||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||  |||  |||||| ||| ||||||||||||||    
T  423 --------tcactaacggtcactaaacagtaaaatcttaattttactctagtaacttggtaaaacaacggttcccactaat-cactaaaagtaattctca 333  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgca 380  Q
    |||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  332 ccaaaaattataattttacccgttctcacaaaatgaacaaaatacccctacgtccaaaatgactaaaatacccttctaacacggaaaccatgaaaatgca 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 153; Significance: 1e-80; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 81 - 390
Target Start/End: Complemental strand, 109160 - 108851
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaac 180  Q
    |||||| ||||| |||||| |||||||||||||| |||||| |||| ||||||| |||||||| | |||||| ||| |||||||||||||||||| ||||    
T  109160 aatgggtctaactctcaacttaatggacttaacccatttctattcaaatcaaaatgtttctacccacacaacagtaattcactaataacggtcaa-taac 109062  T
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||| ||||| ||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| |||  |||| ||||| |||| |||| |||||||    
T  109061 ggtaaaatatcaccaactgtcactaaacgataaaaccttaattattactctagtaacttagtaaaaaaacggttctcactaa-tcactaaaattaattct 108963  T
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaat 377  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| || |  ||||||||||||| ||||||||||    
T  108962 caccaaaacttataa-tttacccgctctcacaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaat 108864  T
Q  378 gcacccaatgatg 390  Q
    |||||||||||||    
T  108863 gcacccaatgatg 108851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 81 - 390
Target Start/End: Complemental strand, 117661 - 117352
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaac 180  Q
    |||||| ||||| |||||| |||||||||||||| |||||| |||| ||||||| |||||||| | |||||| ||| |||||||||||||||||| ||||    
T  117661 aatgggtctaactctcaacttaatggacttaacccatttctattcaaatcaaaatgtttctacccacacaacagtaattcactaataacggtcaa-taac 117563  T
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||| ||||| ||||||||||||||  ||||| ||||||| ||||||||||||||||| |||| |||  |||| ||||| |||| |||| |||||||    
T  117562 ggtaaaatatcaccaactgtcactaaacgataaaaccttaattattactctagtaacttagtaaaaaaacggttctcactaa-tcactaaaattaattct 117464  T
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaat 377  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| || |  ||||||||||||| ||||||||||    
T  117463 caccaaaacttataa-tttacccgctctcacaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaat 117365  T
Q  378 gcacccaatgatg 390  Q
    |||||||||||||    
T  117364 gcacccaatgatg 117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 1e-80; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 20712558 - 20712935
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |         | ||||| ||||| | |||||||||||| || ||||||||||||    
T  20712558 aatatcttatgaaatgaaagtgtgaggaaatttctcataagtgtaggtttttagact-aagtctccttatttggcctaaccctccacttaatggacttaa 20712656  T
Q  113 ccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||| ||||||||  ||| |||||||||| |  | ||||| || ||||||| ||||||| |||||||||||  |||| ||| |||||||||| ||    
T  20712657 cccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaatagcggtcaagtaacggtaaaatgtcactaacggtcactaaacggt 20712756  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  20712757 aaaatcttagttttactttagtaacttagtaaaacaactattcttactaa-ccactaaaagtaactctcaccaaaacttataattttacccgttctcaca 20712855  T
Q  311 atatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgatg 390  Q
    | ||||||||||||||||||||| | |||||||||||||| |  || ||||||| ||| ||||||||||||| ||||||||    
T  20712856 aaatgaccaaaatacccctaagttc-aaatgactaaaatacccttccaacacgggaactcatgaaaatgcactcaatgatg 20712935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 5 - 390
Target Start/End: Original strand, 21397567 - 21397949
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||||| ||| |        |  ||||| |||||||||||||||||||| || ||||    
T  21397567 tctccaaaaatatcttat-aaatgaaagtgtgaggaaatttctcataagtgta-ggtttttatacaaagtctccttaatgggcctaaccctccacttaat 21397664  T
Q  105 ggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcac 203  Q
    |||||||||| |||||| |||| |||  ||| |||||||||| |  ||||||| ||||||||||||||||||| |||||||||| ||| | ||  |||||    
T  21397665 ggacttaacccatttctattcagatctcaaatgtttctacactct-aacggtaattcactaataacggtcaat-aacggtaaaatatcgccaatggtcac 21397762  T
Q  204 taaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccg 302  Q
    ||||| |||||| ||||| | ||||||||||||||||| |||||| |  |||| |||| |   ||||||||||||||||||||||||||||||| || ||    
T  21397763 taaacggtaaaaccttaaatattactctagtaacttagtaaaacatcggttctcactactcaccaaaagtaattctcaccaaaacttataattt-actcg 21397861  T
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  21397862 ttctcacaaaatgaccaaaatacccctaagttcaaaatgactaaaatacccttctaatacggaaaccatgaaaatgcacccaatgatg 21397949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 13 - 346
Target Start/End: Complemental strand, 11336948 - 11336615
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||||||||||||||||||| ||||||||| | |||||  | |        | |||||||||||||||||||||||||||||| ||||||| ||||    
T  11336948 aatatcttatgaaatgaaagtgtgtggaaatttcctctaagacaa-ggtttttatagcaagtccccttaatgggcctaaccctcaacttaatggatttaa 11336850  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||   ||||||| |||| |||||||| | |||||||||| ||||| ||||||||||||| ||||||||||    || ||| |||||| ||| ||    
T  11336849 cccatttcaactcacatctaaaatgtttctacccacacaacggtaattcaccaataacggtcaataaacggtaaaatcctaccaacagtcacttaacggt 11336750  T
Q  212 aaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||| ||||||| |||||| |||||||||| ||||||||  |||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  11336749 aaaaccttaattattactcaagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacttataattt-acccgttctcac 11336652  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaa 346  Q
    || ||||||||||||||||||||||||||||||||||    
T  11336651 aaaatgaccaaaatacccctaagtccaaaatgactaa 11336615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 27182194 - 27181981
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||  ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  27182194 taacggtaaaatgtcactaacggtcactaaaaggtaaaatctaaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 27182096  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |  ||||||| ||||| |||||||    
T  27182095 tcccaccaaaa-ttataattttacccgttctcaccaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacatggaaacccatgaa 27181997  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  27181996 aatgcacccaatgatg 27181981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 199 - 390
Target Start/End: Original strand, 4865900 - 4866092
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt 297  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||| | |||||| ||| ||||||||||| ||| |||| ||||||||||    
T  4865900 gtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattttcactaat-cactaaaagtaattcccacaaaaaattataatttt 4865998  T
Q  298 acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  4865999 acccgttctcacaaaatgacaaaaatactcctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 4866092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 1167801 - 1167620
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||| ||    
T  1167801 gtaaaatcttagttttactctagtaacttagtaaaataactattctcactaattactaaaagtaattctcaccaaaacttataattttacccgttctaac 1167702  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     | |||| ||||||||||||||||  ||||||||||||||| |  ||||||||||||| ||||||||||||| |||||||||    
T  1167701 caaatgaacaaaatacccctaagtttaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatg 1167620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 178 - 390
Target Start/End: Complemental strand, 21646352 - 21646141
Alignment:
Q  178 aacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaatt 276  Q
    |||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||| ||||||| ||    
T  21646352 aacggtaaaatatcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaataactattctcactaa-tcactaaaagtattt 21646254  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaaa 375  Q
    | |||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||| |  |||||||| |||| ||||||||    
T  21646253 cccaccaaaa-ttataattttacccgttcttacaaaatgaccaaaatacccttaagtcc-aaatgactaaaatacccttctaacacgggaacccatgaaa 21646156  T
Q  376 atgcacccaatgatg 390  Q
     | ||||||||||||    
T  21646155 ttacacccaatgatg 21646141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 11584686 - 11584899
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||||||| |||||||||| ||||||| | || |||||||||||||||||| |||| ||||||||| | |||| ||| |||||||||    
T  11584686 taacggtaaaatgtcacaaacggtcactaaacggtaaaatgtcaactttactctagtaacttagtaaaataactattctcaataat-cactaaaagtaat 11584784  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| | |||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  11584785 tcccaccaaaaat-ataattttacccgttctcacaaaatgaccaaaatatcccgaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 11584883  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||| | ||||||    
T  11584884 aatgcactcgatgatg 11584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 152 - 385
Target Start/End: Original strand, 28262071 - 28262304
Alignment:
Q  152 cggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaacta 251  Q
    ||||| || ||||||||||||||| |||||||||||  |||| ||| ||||| |||| ||||||||||||||||||||||||||||||| |||| |  ||    
T  28262071 cggtaattaactaataacggtcaagtaacggtaaaatgtcactaacggtcacgaaacggtaaaatcttaattttactctagtaacttagtaaaatagtta 28262170  T
Q  252 ttcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
     ||| ||||| |||| ||||||||||| |||||||| ||||| |||||| |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  28262171 atctcactaa-tcactaaaagtaattcccaccaaaa-ttatagttttacacgttctcataaaatgaccaaaatacccctaagtccaaaataactaaaata 28262268  T
Q  351 acactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
     |  || |||||| ||| ||||| ||||||||||||    
T  28262269 cccttccaacacgaaaacccatgcaaatgcacccaa 28262304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 21205552 - 21205765
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| || || |||| ||||||||||| ||||||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  21205552 taacggtaaaatgtcactaacggttaccaaacggtaaaatcttagttttactctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 21205650  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| |||  ||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||| |  ||||| ||||||| |||||||    
T  21205651 tctcacccaaaactataattttacccgtcctcaccaaatgaccaaaatacccctaagtccaaaa-gactaaaatacccttctaatacggaaacccatgaa 21205749  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  21205750 aatgcacccaatgatg 21205765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 68 - 390
Target Start/End: Complemental strand, 24182844 - 24182521
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaat 166  Q
    ||||||||||||||||||||||||| |||||  | |||||| |||||| |||||   |||    |||| | | |||||| |||||||||| |||||||||    
T  24182844 atcaagtccccttaatgggcctaactctcaaatttaatggatttaacccatttcaactcattctaaaatgctcctacacacacaacggtagttcactaat 24182745  T
Q  167 aacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactat-tcttactaattc 264  Q
    ||||| |||| |||||||||| ||||| ||| | |||||||| |||||| ||||||| ||||||||||||||  | ||||| | |   ||| || || |     
T  24182744 aacggccaat-aacggtaaaatatcaccaacagccactaaacggtaaaaccttaattattactctagtaactcggtaaaactaatggctctcaccaaata 24182646  T
Q  265 acaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgg 364  Q
      |||| ||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||| |    
T  24182645 ctaaaaataattctcatcaaa-cttataattt-acccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacag 24182548  T
Q  365 aaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| ||||||||||||| |||||||||    
T  24182547 aaacccatgaaaatgcaaccaatgatg 24182521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 21651327 - 21651539
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| |||  ||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  21651327 taacggtaaaatgtcactaacgatcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 21651424  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||| |  ||||||||||||| |||||||    
T  21651425 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgacaaaaatacccttctaacacggaaacccatgaa 21651523  T
Q  375 aatgcacccaatgatg 390  Q
     |||||| ||||||||    
T  21651524 gatgcactcaatgatg 21651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 23515270 - 23515387
Alignment:
Q  272 taattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-ca 370  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||    
T  23515270 taattctcaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaactca 23515368  T
Q  371 tgaaaatgcacccaatgat 389  Q
    |||||||||||||||||||    
T  23515369 tgaaaatgcacccaatgat 23515387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 190 - 390
Target Start/End: Complemental strand, 23981116 - 23980916
Alignment:
Q  190 tcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaact 288  Q
    |||| ||| |||||||||| ||||||||| || |||||||||||||||||| |||| ||||||||| ||||| |||| |||| |||||| |||||||| |    
T  23981116 tcactaacggtcactaaacggtaaaatctcaactttactctagtaacttagcaaaataactattctcactaa-tcactaaaattaattcccaccaaaaat 23981018  T
Q  289 tataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatg 387  Q
    |||||||||||| |||||||||| |||| |||||||||| || |||| |||||||||||||  |  ||||||||||||| |||| |||||||| ||||||    
T  23981017 tataattttacctgttctcacaaaatgatcaaaatacccttatgtcc-aaatgactaaaatgcccttctaacacggaaacccataaaaatgcatccaatg 23980919  T
Q  388 atg 390  Q
    |||    
T  23980918 atg 23980916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 180 - 390
Target Start/End: Complemental strand, 25944272 - 25944065
Alignment:
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||||  |||| ||| | |||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| ||||||||||||    
T  25944272 cggtaaaatgtcactaacggccactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaattct 25944175  T
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaat 377  Q
    |||| |||  ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||   | |  ||||||||||||| ||||||||||    
T  25944174 cacccaaaactataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaa---acccttctaacacggaaacccatgaaaat 25944078  T
Q  378 gcacccaatgatg 390  Q
    | |||||||||||    
T  25944077 gtacccaatgatg 25944065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 32951338 - 32951516
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||| ||||||||||||||   ||  ||||||||| |||||| ||| ||||||||||  |||||||| |||||||||||||||||||||    
T  32951338 gtaaaatctcaattt-actctagtaacttaatgaagtaactattctcactaat-cactaaaagtaatttccaccaaaa-ttataattttacccgttctca 32951434  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||  ||||||||||| ||||||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  32951435 caaattgaccaaaata-ccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 32951516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 19406234 - 19406400
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||||||||||||| |||| |||  |||  ||||| |   |||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  19406234 ttactctagtaacttagcaaaataacggttcccactaaatactaaaaataattctcacaaaaacttataattt-acccgttctcacaaaatgaccaaaat 19406332  T
Q  324 acccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||||||||||| || |  |||||||| |||| |||  |||||||||||| |||||    
T  19406333 acctctaagtccaaaatgactaaattacccttctaacacagaaatccacaaaaatgcacccactgatg 19406400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 136 - 390
Target Start/End: Original strand, 23467041 - 23467297
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagta 234  Q
    |||||||||| | ||||||||  | |||||||||||||| |||||||||||| ||||  ||| |||||  ||| |||||||  ||||| |||| ||||||    
T  23467041 gtttctacacactcaacggtaaattactaataacggtcagttaacggtaaaatatcaacaacggtcacataacggtaaaatactaattattaccctagta 23467140  T
Q  235 acttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagt 333  Q
    |||||| |||| ||  ||||  |||||  ||| |||| ||||||| ||||||| |||  | ||||| | | | | ||| ||||||||||||||| | |||    
T  23467141 acttagcaaaataataattcccactaaa-cactaaaaataattctaaccaaaaattactagtttactcttacacccaaaatgaccaaaatacccatgagt 23467239  T
Q  334 ccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| || |  | ||||||||||| |||||||||||||||||||||||    
T  23467240 ccaaaatgactaaattacccttataacacggaaacccatgaaaatgcacccaatgatg 23467297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 21907266 - 21907426
Alignment:
Q  78 cttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaat 176  Q
    |||||||| |||||| ||| || |||||||||||| | |||||| |||| |||||||  |||||||| | |||||||||| |||||||||||||||| |     
T  21907266 cttaatggacctaactctccacttaatggacttaaaccatttctattcaaatcaaaaatgtttctacccacacaacggtaattcactaataacggtcgaa 21907365  T
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaac 236  Q
    ||||||||||||||||| |||  ||||||||  ||||||| | |||| |||||||| ||||    
T  21907366 taacggtaaaacatcaccaacgatcactaaatggtaaaatatcaattattactctactaac 21907426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 22662171 - 22662094
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaaaatgcacccaatgat 389  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||| |||| |||||||||||||| |||||||    
T  22662171 atgaccaaaatacccctaagtccaaaatgactaaaatatccttctaacacgggaacccatgaaaatgcactcaatgat 22662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 433218 - 433296
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || || ||||||||| ||| |||||||||||||| ||||||||    
T  433218 atgaccaaaatacccctgagtccaaaatgactaaattaccattctaacacgaaaacccatgaaaatgcactcaatgatg 433296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 7729207 - 7729285
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| || ||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||||    
T  7729207 atgaccaaaatacctctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatg 7729285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 28902980 - 28903058
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||||| |||| ||||||||||| |||||||||||    
T  28902980 atgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatg 28903058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 28939375 - 28939453
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||||| |||| ||||||||||| |||||||||||    
T  28939375 atgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatg 28939453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 19349798 - 19349875
Alignment:
Q  313 atgaccaaaatacccc-taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    |||||||||||||||| ||||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||    
T  19349798 atgaccaaaataccccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatga 19349875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 22662382 - 22662271
Alignment:
Q  75 ccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtc 173  Q
    ||||| ||||||||||||||| ||| |||||||||||||| |||||| |||| ||| |||| |||||||||| |  |||||||  | || ||||||||||    
T  22662382 cccctaaatgggcctaaccctaaacttaatggacttaacccatttctattcaaatcaaaaatgtttctacactctaaacggtaaattaccaataacggtc 22662283  T
Q  174 aattaacggtaa 185  Q
    | ||||||||||    
T  22662282 acttaacggtaa 22662271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 23418000 - 23418082
Alignment:
Q  306 tcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatg 387  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| || || |||||| ||||| || |||||||||||||||    
T  23418000 tcacaaaatgaccaaattacctctaagtccaaaatgactaaaataccattccaacacgaaaaccaattaaaatgcacccaatg 23418082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 3674650 - 3674727
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||  | ||||||||||||||||| || |  ||||||||||||| ||||||||||||||||||||||    
T  3674650 atgaccaaaataccattgagtccaaaatgactaaattatccttctaacacggaaacccatgaaaatgcacccaatgat 3674727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 37984131 - 37984208
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||| ||| |||| |||||||||||||||||    
T  37984131 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaacccataaaaatgcacccaatgat 37984208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 2032547 - 2032604
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||| |||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  2032547 aaaaataattctcaccaa--cttataattttacccgttctcacaaaatgaccaaaatacc 2032604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 206 - 325
Target Start/End: Complemental strand, 11211687 - 11211569
Alignment:
Q  206 aacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgtt 304  Q
    ||||||||||||| | ||||||||| ||| ||||| |||| ||| || || |||||| ||| |||| |||||| |||||||| |||||||||||||||||    
T  11211687 aacagtaaaatctaagttttactctggtatcttagtaaaataaccatcctcactaat-cactaaaaataattcccaccaaaa-ttataattttacccgtt 11211590  T
Q  305 ctcacaatatgaccaaaatac 325  Q
    ||||||| || || |||||||    
T  11211589 ctcacaaaattactaaaatac 11211569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 326
Target Start/End: Complemental strand, 108373 - 108314
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||||| |||  ||||||||||||||||||||||| || |||||||||||    
T  108373 aaaagtaattctcacccaaaactataattttacccgttctcacaaaattaccaaaatacc 108314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 1167907 - 1167796
Alignment:
Q  77 ccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaa 175  Q
    ||||| ||||| |||||||| || |||||||||||||| |||||| |||| | | |||| |||||||||| |  | ||||| || |||||||||||||||    
T  1167907 ccttattgggcttaaccctccacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggtaattaactaataacggtcaa 1167808  T
Q  176 ttaacggtaaaa 187  Q
     ||| |||||||    
T  1167807 gtaatggtaaaa 1167796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 21907190 - 21907280
Alignment:
Q  22 tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaac 113  Q
    |||||||||||||||||||||||||| |||||| || |        ||||||||||||||||||||||||| ||| || |||||||| ||||    
T  21907190 tgaaatgaaagtgtgaggaaatttctcataagacta-ggtttttatatcaagtccccttaatgggcctaactctccacttaatggacctaac 21907280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 16596258 - 16596331
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    ||||||||||||||||| |||| ||||||||| |||| || |||||||| ||||| ||||||||||||| |||||    
T  16596258 atgaccaaaatacccctgagtctaaaatgact-aaattaccctctaacatggaaatccatgaaaatgcatccaat 16596331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 5450300 - 5450223
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||| | | ||||||||||||||| || |  ||||||||| ||| |||| |||||||||||||||||    
T  5450300 atgaccaaaataccctttaatccaaaatgactaaattacccttctaacacgaaaatccattaaaatgcacccaatgat 5450223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 390
Target Start/End: Original strand, 23494673 - 23494750
Alignment:
Q  314 tgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||| |||| ||||||||||||||||| ||    ||||||||| ||| |||||||||| ||||||||||||    
T  23494673 tgaccaaaatatccctgagtccaaaatgactaaattactcttctaacacgaaaacccatgaaaatccacccaatgatg 23494750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 11211794 - 11211699
Alignment:
Q  76 cccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggt 172  Q
    |||||||||||||||||||  |||||||||||||||||| |||||| |  | ||||||| ||||||| |||   ||||  |||| ||||||||||||    
T  11211794 cccttaatgggcctaaccca-aacctaatggacttaacccatttctatctatatcaaaatgtttctatacctctaacgccatttaactaataacggt 11211699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 16536847 - 16536946
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  16536847 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 16536945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 37053394 - 37053493
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  37053394 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 37053492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 6457323 - 6457398
Alignment:
Q  272 taattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    |||| |||||||||| |||  | ||||||| | ||||||| ||||||||||||||||| |||  ||||||||||||    
T  6457323 taatcctcaccaaaaattactaatttacccttactcacaaaatgaccaaaatacccctgagtaaaaaatgactaaa 6457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 350
Target Start/End: Complemental strand, 19315900 - 19315845
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| ||||||| | ||||||||||||||| | | ||||||||||||||||||    
T  19315900 tttaccctttctcactaaatgaccaaaatacccttgaatccaaaatgactaaaata 19315845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 152; Significance: 5e-80; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 41142 - 41521
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |        ||||| || |||||||||||||||||||| ||   ||||||||||    
T  41142 aatatcttatgaaatgaaagtgtgaggaaatttctcataagagta-ggtttttacatcaaatctccttaatgggcctaaccctccactccatggacttaa 41240  T
Q  113 ccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||| |||| | |||||  |||||||||| |  | ||||| |||||| ||||||||||| |||||||||||  |||| |||  ||||||||| ||    
T  41241 cccatttctattcaaaccaaaaatgtttctacactctaaccggtaattcactgataacggtcaagtaacggtaaaatgtcactaacgatcactaaacggt 41340  T
Q  212 aaaatcttaatt--ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||| |||||||  ||||||||||||||||| ||||||||  |||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||    
T  41341 aaaaccttaattatttactctagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattcccaccaaaa-ttataattttatccgttctca 41438  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa-accatgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||  |||||||||||||||||||||||    
T  41439 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaatcccatgaaaatgcacccaatgatg 41521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 13 - 366
Target Start/End: Original strand, 46649 - 47003
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |        ||||| || |||||||||||||||||||| ||   ||||||||||    
T  46649 aatatcttatgaaatggaagtgtgaggaaatttctcataagagta-ggtttttacatcaaatctccttaatgggcctaaccctccactccatggacttaa 46747  T
Q  113 ccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    |  |||||| |||| | |||||  |||||||||| |  | ||||| |||||| ||||||||||| |||||||||||  |||| ||| |||||||||| ||    
T  46748 ctcatttctattcaaaccaaaaatgtttctacactctaaccggtaattcactgataacggtcaagtaacggtaaaatgtcactaacggtcactaaacggt 46847  T
Q  212 aaaatcttaatt--ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||| |||||||  ||||||||||||||||| ||||||||  |||| |||||| ||| ||||||||||| |||||||| |||||||||||||||||||||    
T  46848 aaaaccttaattatttactctagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattcccaccaaaa-ttataattttacccgttctca 46945  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    ||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  46946 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaa 47003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 80491 - 80703
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| |||||| |  ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  80491 taacggtaaaatgtcactaacggtcactaaacggtaaaaccacaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 80588  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |  ||||||||||||| |||||||    
T  80589 tcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagttcaaaa-gactaaaatacccttctaacacggaaacccatgaa 80687  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  80688 aatgcacccaatgatg 80703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 8e-79; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 77 - 381
Target Start/End: Original strand, 47290328 - 47290632
Alignment:
Q  77 ccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaa 175  Q
    |||||||||||||||| ||  || |||||||||||||| |||||| ||||||||  ||| |||||||||| |  ||| ||| |||||| |||| ||||||    
T  47290328 ccttaatgggcctaactctacacttaatggacttaacccatttctattcacatctcaaatgtttctacactct-aacagtaattcactcataatggtcaa 47290426  T
Q  176 ttaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaat 275  Q
     |||||||||||  |||| ||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||| |||||     |||||||||    
T  47290427 ataacggtaaaatgtcactaacggtcactaaacggtaaaatcttaattttactctattaacttagtaaaacaactattctcactaacaactaaaagtaat 47290526  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaa 375  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||    
T  47290527 tctcaccaaaacttataattttacccgttctcacccaatgaccaaaatacccctaagtccacaatgactaaaataccattctaatacggaaaccatgaaa 47290626  T
Q  376 atgcac 381  Q
    ||||||    
T  47290627 atgcac 47290632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 12369603 - 12369227
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |        |  | ||| |   |||||| |||||||||||| ||||||||||||    
T  12369603 aatatcttatgaaatgaaaatgtgaggaaatttctcataagagta-ggtttttatagtatgtctcacaaatgggtctaaccctcaacttaatggacttaa 12369505  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    || |||||| |||||||||||| ||||||||||  ||||||||||||||||| ||||||| || |||||||||||  |||| ||| ||||||||||  ||    
T  12369504 cccatttctattcacatcaaaatgtttctacacatacaacggtatttcactactaacggttaaataacggtaaaatgtcaccaacggtcactaaacgata 12369405  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaat 312  Q
    ||||||||| ||||||||||| |||||| |||||||   |||| ||| |||   |||| |||||||||||||||| |||||||||||||||| ||| ||     
T  12369404 aaatcttaactttactctagtcacttagtaaaacaa-ggttctcacttattactaaaattaattctcaccaaaacctataattttacccgttttcagaaa 12369306  T
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||||||||||||||||||| |  || |||||||||| ||||||||||| || ||||||||    
T  12369305 atgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgaactcaatgatg 12369227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 5 - 388
Target Start/End: Original strand, 44865704 - 44866075
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||| ||||  ||| |        | |||||||||||||||||||||||||||||| ||||    
T  44865704 tctccaaaaatatcttaagaa-tgaaagtgtgaggaaatttctcataaatgta-ggtttttataccaagtccccttaatgggcctaaccctcaacttaat 44865801  T
Q  105 ggacttaaccaatttcttttcacatcaa-aaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcac 203  Q
    |||||||||  |||||| |||||||| | || |||||||||| |  | ||||| |||||||||||||||           |||| ||||| ||| |||||    
T  44865802 ggacttaactcatttctattcacatctacaatgtttctacactctaaccggtaattcactaataacggt-----------aaaatatcactaacggtcac 44865890  T
Q  204 taaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccg 302  Q
    | ||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||| |||||||||||||||||||||||||||    
T  44865891 ttaacggtaaaatcttaattttactctagtaacttagtaaaacaactattctcactaac-cactaaaagtaactctcaccaaaacttataattttacccg 44865989  T
Q  303 ttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatga 388  Q
    || |||||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||| ||  ||||||||| ||||||||||    
T  44865990 ttgtcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacgaaactcatgaaaatacacccaatga 44866075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 11287900 - 11288279
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat-ggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||  | |        | ||||| ||||||||||||||||| ||||| || || |||||||    
T  11287900 aatatcttatgaaatgaaagtgtgaggaaatttcctctaagacaa-gatttttatagcaagtgcccttaatgggcctaactctcaaacttattggactta 11287998  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||   ||| ||| |||| |||||||||| |||||||||| ||||||||||||||||||| |||| ||||| |  || ||| |||||||||| |    
T  11287999 acccatttcaactcaaatctaaaatgtttctacacacacaacggtaattcactaataacggtcaataaacgttaaaatactaccaacggtcactaaacgg 11288098  T
Q  211 taaaatctt-aattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||| ||| ||| ||||||||||||||||| ||||||||  |||| ||||| |||| ||||||||||||||||||||||||||| |||||||| || ||    
T  11288099 taaaaccttaaatgttactctagtaacttagtaaaacaacggttctcactaa-tcactaaaagtaattctcaccaaaacttataa-tttacccgctccca 11288196  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| ||||||||||||||||||| ||||||||||||||  || |  ||||||||||||| |||||||||||||||||||||||    
T  11288197 caaaatgaccaaaatacccctaaatccaaaatgactaagttacccttctaacacggaaacccatgaaaatgcacccaatgatg 11288279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 101 - 390
Target Start/End: Original strand, 12759551 - 12759842
Alignment:
Q  101 taatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgt 200  Q
    ||||||| |||||| |||||| |||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| |||  |    
T  12759551 taatggatttaacccatttctattcaaatcaaaatgtttctacacacacaacgatatttcactaataacggtcaattaacgttaaaacatcaccaacgat 12759650  T
Q  201 cactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactat-tcttactaattcacaaaagtaattctcaccaaaacttataatttta 298  Q
    ||||| || |||||||||||||| ||||||||||||||  | ||||| | |   ||| |  || |   |||| |||||||||||||| ||||||||||||    
T  12759651 cactacacggtaaaatcttaattattactctagtaactcggtaaaaccaatggctctcaacaaatactaaaaataattctcaccaaa-cttataatttta 12759749  T
Q  299 cccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacac-ggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||||||||||||    
T  12759750 cccgttctctcaaaatgaccaaaatacccctaagtccaaaatgactaaaataccattctaacacgggaatccatgaaaatgcacccaatgatg 12759842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 131 - 390
Target Start/End: Complemental strand, 12247764 - 12247505
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| |||||||||| | |||||||||||||||||||||||||||| || || ||| |||||||||| ||||||| ||||||  |||||    
T  12247764 aaaatgtttctacacacacaacggtaat-cactaataacggtcaattaacggtaaaatattaccaacagtcactaaacggtaaaatattaattactactc 12247666  T
Q  230 tagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccct 329  Q
    ||||||||||| ||||||||  |||| ||||| |   |||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||||||||    
T  12247665 tagtaacttagtaaaacaacagttctcactaaatactaaaaataattctcgccaaaacttataattt-acccgttctcacagaatgaccaaaatacccct 12247567  T
Q  330 aagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||||    
T  12247566 aagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatg 12247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 87 - 390
Target Start/End: Original strand, 144191 - 144484
Alignment:
Q  87 cctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaa 185  Q
    ||||||||||||  |||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| |||||||||||||||           ||    
T  144191 cctaaccctcaaattaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattcactaataacggt-----------aa 144279  T
Q  186 aacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaa 284  Q
    || ||||| ||| ||||||||||   ||||||||||||||||||||||||||||| ||||||||  |||  |||||  ||| |||||||| |||||||||    
T  144280 aatatcactaacggtcactaaacgcaaaaatcttaattttactctagtaacttagtaaaacaacggttcccactaa--cactaaaagtaactctcaccaa 144377  T
Q  285 aacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcaccc 383  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |  || |||||||||| ||||||||||||||||    
T  144378 aacttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaacgactaaaatacccttccaacacggaaacccatgaaaatgcaccc 144477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 110887 - 110674
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||     
T  110887 taacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaacaactattcttactaac-cactaaaagtaac 110789  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| |  | ||| ||||||| |||||||    
T  110788 tctcaccaaaacttatagttttacccgttcccacaaaatgaccaaaatacccctaagtccaaaa-gactaaaatacccttttaatacggaaacccatgaa 110690  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  110689 aatgcacccaatgatg 110674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 80 - 389
Target Start/End: Complemental strand, 7283761 - 7283463
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaattt-cttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaatta 178  Q
    |||||||||||||||  |||||||||||||||||| |||| || |||| | ||||| |||||||||| || || |||| || ||||||||||||          
T  7283761 taatgggcctaacccaaaacctaatggacttaacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacggt------ 7283668  T
Q  179 acggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattc 277  Q
         ||||  |||| ||| |||||||||| ||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||| ||| |||||||| ||    
T  7283667 -----aaaatgtcactaacggtcactaaacggtaaaatcttagttt-actctagtaacttagtaaaataactattctcactaat-cactaaaagtaactc 7283575  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |  ||||| ||||||| |||||||||    
T  7283574 tcaccaaaacttataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaa-gactaaaatacccttctaatacggaaacccatgaaaa 7283476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 83 - 388
Target Start/End: Original strand, 35095366 - 35095666
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||||||||||||||  |||||||||||||| |||||| |||| | |||||  |||||||       | ||||| ||||||||||||| |||| |||||    
T  35095366 tgggcctaaccctcaatttaatggacttaacccatttctattcaaaccaaaaatgtttcta-------accggtaattcactaataacgatcaagtaacg 35095458  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||  ||| |||||||||| ||||||||||| ||||||||||| ||||||| ||||   ||||||| |||||| ||| ||||||||||| |     
T  35095459 gtaaaatgtcattaacggtcactaaacggtaaaatcttagttttactctagcaacttagtaaaattgctattctcactaat-cactaaaagtaattccct 35095557  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |   |||||| ||||| ||||||||||||    
T  35095558 ccaaaaattataattttacccgttcacacaaaatgaccaaaatacccctaagtccaaaatgactaaaataccctcctaacaaggaaatccatgaaaatgc 35095657  T
Q  380 acccaatga 388  Q
    |||||||||    
T  35095658 acccaatga 35095666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 181 - 390
Target Start/End: Original strand, 16212390 - 16212598
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctc 279  Q
    |||||||  |||| |||||||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||||    
T  16212390 ggtaaaatgtcactaactgtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctc 16212487  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgc 379  Q
     || ||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  16212488 ccccaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaataccattctaacacggaaaccatgaaaatgc 16212587  T
Q  380 acccaatgatg 390  Q
    ||| |||||||    
T  16212588 acctaatgatg 16212598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 13 - 327
Target Start/End: Original strand, 3895506 - 3895810
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |         | ||||| ||||| |||||||||||||| || ||||||||||||    
T  3895506 aatatcttatgaaatgaaagtgtgaggaaatttctcataagagtaggtttttatact-aagtctccttattgggcctaaccctccacttaatggacttaa 3895604  T
Q  113 ccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    || |||||| ||||||||  ||| |||||||||| |  | ||||| || ||||||||||||||| ||||||||||| |||||          ||||| ||    
T  3895605 cccatttctattcacatctcaaatgtttctacactctaatcggtaattaactaataacggtcaagtaacggtaaaatatcac----------taaacggt 3895694  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    ||||||||| ||||||||||||||||||| ||||||||  |||| |||||  ||| ||||||||||||||||| |||||||||||||||||| ||||||     
T  3895695 aaaatcttagttttactctagtaacttagtaaaacaacggttctcactaac-cactaaaagtaattctcaccacaacttataattttacccgctctcacc 3895793  T
Q  311 atatgaccaaaataccc 327  Q
    | |||||||||||||||    
T  3895794 aaatgaccaaaataccc 3895810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 13862551 - 13862339
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||  |||| |||||  ||| |||||||||    
T  13862551 taacggtaaaatgtcactaacggtcactaaacggtaaaatcttaactttactctagtaacttagtaaaacaacagttctcactaac-cactaaaagtaat 13862453  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||| |  || |||||||||| |||||||    
T  13862452 tctcaccaaaacttataattttacccgttctcacataatgaccaaaatacccataagttcaaaatgactaaaatacccttccaacacggaaacccatgaa 13862353  T
Q  375 aatgcacccaatga 388  Q
    |||| || ||||||    
T  13862352 aatgtacacaatga 13862339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 136 - 390
Target Start/End: Complemental strand, 16569646 - 16569392
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagta 234  Q
    |||||||||| |||||||| | |||||||||||||||||| ||||||||||| ||||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  16569646 gtttctacacacacaacggcaattcactaataacggtcaaataacggtaaaatatcaccaacggtcactaaacggtaaaatattaattattactctagta 16569547  T
Q  235 acttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtc 334  Q
    |||||| ||||||||  |||| ||||| |   |||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||  |     
T  16569546 acttagtaaaacaacagttctcactaaatactaaaaataattttcaccaaaacttataa-tttacccgtactcacaaaatgaccaaaatacccctatat- 16569449  T
Q  335 caaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||| || |  ||||||||| ||| ||||||||||| ||| |||||||    
T  16569448 caaaatgactaaattacccttctaacacgaaaacccatgaaaatgtacctaatgatg 16569392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 136 - 390
Target Start/End: Original strand, 16596016 - 16596270
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagta 234  Q
    |||||||||| |||||||| | |||||||||||||||||| ||||||||||| ||||| ||| |||||||||| ||||||| |||||| |||||||||||    
T  16596016 gtttctacacacacaacggcaattcactaataacggtcaaataacggtaaaatatcaccaacggtcactaaacggtaaaatattaattattactctagta 16596115  T
Q  235 acttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtc 334  Q
    |||||| ||||||||  |||| ||||| |   |||| ||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||  |     
T  16596116 acttagtaaaacaacagttctcactaaatactaaaaataattttcaccaaaacttataa-tttacccgtactcacaaaatgaccaaaatacccctatat- 16596213  T
Q  335 caaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||| || |  ||||||||| ||| ||||||||||| ||| |||||||    
T  16596214 caaaatgactaaattacccttctaacacgaaaacccatgaaaatgtacctaatgatg 16596270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 2029554 - 2029768
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| |||| |||||||||||| ||||| ||||||| |||| ||||||||| |||||| ||| |||||||||    
T  2029554 taacggtaaaatgtcactaacggtcactaaacggtaagatcttaattttattctaggaacttagtaaaataactattctcactaat-cactaaaagtaat 2029652  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| ||||||| ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||  ||||| |||||||    
T  2029653 tcccaccaaaaattataatattacctgttctcacaaaatgaccaaaatacccttaagtcgaaaatgactaaaatacccttctaacttggaaacccatgaa 2029752  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  2029753 aatgcacccaatgatg 2029768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 127052 - 127264
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  127052 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 127149  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |  |||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  127150 ttccaccaaaa-ttataattttacccattctcacaaaatgatcaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 127248  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  127249 aatgcacccaatgatg 127264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 1936638 - 1936426
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  1936638 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 1936541  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| ||||||||||| |||||||||||| ||||||||||||||| |||||  |||| |||||||||| |  ||||||||||||| |||||||    
T  1936540 tcccaccaaaaattataattttatccgttctcacaaaatgaccaaaatacccttaagtttaaaa-gactaaaatacccttctaacacggaaacccatgaa 1936442  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  1936441 aatgcacccaatgatg 1936426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 26069218 - 26069002
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaa----ttcacaaaagt 272  Q
    |||||||| || ||||| ||| ||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||    ||   ||||||    
T  26069218 taacggtagaatatcactaacggtcaccaaacggtaaaatcttaattttactctagta-cttagtaaaacaactattctcactaaccactttctaaaagt 26069120  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    |||||||| | || ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| ||||    
T  26069119 aattctcatcgaa-cttataattttactcgttctcataaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgaaaacccat 26069021  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||  ||||||||    
T  26069020 gaaaatgcagtcaatgatg 26069002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 26069876 - 26069660
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaa----ttcacaaaagt 272  Q
    |||||||| || ||||| ||| ||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||    ||   ||||||    
T  26069876 taacggtagaatatcactaacggtcaccaaacggtaaaatcttaattttactctagta-cttagtaaaacaactattctcactaaccactttctaaaagt 26069778  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    |||||||| | || ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| ||||    
T  26069777 aattctcatcgaa-cttataattttactcgttctcataaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgaaaacccat 26069679  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||  ||||||||    
T  26069678 gaaaatgcagtcaatgatg 26069660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 26093663 - 26093447
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaa----ttcacaaaagt 272  Q
    |||||||| || ||||| ||| ||||| |||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||    ||   ||||||    
T  26093663 taacggtagaatatcactaacggtcaccaaacggtaaaatcttaattttactctagta-cttagtaaaacaactattctcactaaccactttctaaaagt 26093565  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    |||||||| | || ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| ||||    
T  26093564 aattctcatcgaa-cttataattttactcgttctcataaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgaaaacccat 26093466  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||  ||||||||    
T  26093465 gaaaatgcagtcaatgatg 26093447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 25124765 - 25124977
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||||   ||||||||||    
T  25124765 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaattactaaaagtaatt 25124863  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
      ||  |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||| |  ||||| ||||||| ||||||||    
T  25124864 tccagtaaaaattataattttacccgttctcacaaaatgaccaaaatacccctatgtccaaaa-gactaaaatacccttctaatacggaaacccatgaaa 25124962  T
Q  376 atgcacccaatgatg 390  Q
    |||||||||| ||||    
T  25124963 atgcacccaaagatg 25124977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 223 - 390
Target Start/End: Original strand, 3060613 - 3060779
Alignment:
Q  223 tttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    ||||||||||||||||| ||||  || |||||| |||||| ||| ||||||||||| |||||||| |  ||||||||||||||||||||| |||||||||    
T  3060613 tttactctagtaacttatgaaat-aattattctcactaat-cactaaaagtaattcccaccaaaaatg-taattttacccgttctcacaaaatgaccaaa 3060709  T
Q  322 atacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||||    
T  3060710 atacccctaagtccaaaatgactaaaatacccttctaacacggaaactcatgaaaatgcacccaatgatg 3060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 17817077 - 17816864
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| | ||| ||| |||||||||| ||||||||| ||||| |||| |||||||||   ||| || |||||| |||||| ||| |||||||||    
T  17817077 taacggtaaaataccactaacggtcactaaacggtaaaatctcaattt-actcaagtaacttaatgaaataattattctcactaat-cactaaaagtaat 17816980  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| ||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||| |  ||  ||||||||| |||||||    
T  17816979 tcccactaaaaattataattttacccgttcttacaaagtgaccaaaatacccctaagtctaaaatgactaaaatacccttcccacacggaaacccatgaa 17816880  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  17816879 aatgcacccaatgatg 17816864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 19049924 - 19050137
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| | ||| ||| |||||||||| ||||||||| ||||| |||| |||||||||   ||| || |||||| |||||| ||| |||||||||    
T  19049924 taacggtaaaataccactaacggtcactaaacggtaaaatctcaattt-actcaagtaacttaatgaaataattattctcactaat-cactaaaagtaat 19050021  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |  ||  ||||| ||| |||||||    
T  19050022 tcccactaaaaattataattttacccgttcttacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttcccacacgaaaacccatgaa 19050121  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  19050122 aatgcacccaatgatg 19050137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 210 - 390
Target Start/End: Complemental strand, 13036685 - 13036506
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||| |||||||| |||||   ||||||||||||| |||||| ||| ||||||||||| || ||||| ||||||||| |||||||||||    
T  13036685 gtaaaatctcaattt-actctagtcacttaatgaaacaactattctcactaat-cactaaaagtaattcccatcaaaa-ttataatttcacccgttctca 13036589  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| ||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  13036588 caaaatgacaaaattacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 13036506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 11580383 - 11580170
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| | ||||||||||||   ||| |||| |||| |||||| ||| |||||||||    
T  11580383 taacggtaaaatgtcactaacagtcactaaacggtaaaatctcaattt-agtctagtaacttaatgaaataacttttctcactaat-cactaaaagtaat 11580286  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgg---aaacc-at 371  Q
    || |||||||| |||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||   ||||  ||    
T  11580285 tc-caccaaaattta--attttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaataccattctaacacggtggaaacttat 11580189  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||    
T  11580188 gaaaatgcacccaatgatg 11580170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 14419801 - 14419625
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| | ||||||||||||||||||| |||| | ||||||| |||||| ||| ||||||||||| ||| |||  ||||||||||| ||| |||||    
T  14419801 gtaaaatctaagttttactctagtaacttagtaaaata-ctattctcactaat-cactaaaagtaattcccacaaaa--ttataattttatccgatctca 14419706  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||| |||||||||    
T  14419705 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgaacccaatga 14419625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 45451932 - 45451563
Alignment:
Q  13 aatatctta-tgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggactta 111  Q
    ||||||||| |||||||||||||||||||||||||| |||||| || |        ||||||||||||||| |||||||||  || || |||||||||||    
T  45451932 aatatcttagtgaaatgaaagtgtgaggaaatttctcataagacta-ggtttttatatcaagtccccttaaagggcctaactgtccacttaatggactta 45451834  T
Q  112 accaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||| ||||  ||||||  ||||||| || |||||||||| |||||||||||||||           |||| ||| | ||| |||||||||| |    
T  45451833 acccatttctattcaattcaaaaatgtttctatacacacaacggtaattcactaataacggt-----------aaaatatctccaacggtcactaaacgg 45451745  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaacaactat-tctta-ctaattcacaaaagtaattctcaccaaaacttataattttacccgttctc 307  Q
    |||||| | || | ||||||||||||||  | ||||| | |   ||| | | ||| |  |||| |||||||||||||| |||||||||||||||||||||    
T  45451744 taaaatgtcaactattactctagtaactcggtaaaactaatggctctcaaccaatactaaaaa-taattctcaccaaa-cttataattttacccgttctc 45451647  T
Q  308 acaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     ||| |||||||||||||||| ||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  45451646 tcaaaatgaccaaaatacccccaagtctaaaatgactaaaatacccttctaacacggaaatccatgaaaatgcacccaatgatg 45451563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 13321637 - 13321848
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||||||||| ||| |||||||| | ||||||||| ||||| ||| ||| ||||||   ||| ||||||||| |||||| ||| |||||||||    
T  13321637 taacggtaaaacatcaccaacggtcactaa-cggtaaaatctcaattt-actttagcaacttaatgaaataactattctcactaat-cactaaaagtaat 13321733  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaa 374  Q
    || |||||||| ||||||||||||||||  |||||| ||||| ||||||||| |||||||||||||||||||||| |  |||||||  ||||| ||||||    
T  13321734 tcccaccaaaa-ttataattttacccgtaatcacaaaatgactaaaatacccttaagtccaaaatgactaaaatacccttctaacatagaaactcatgaa 13321832  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  13321833 aatgcacccaatgatg 13321848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 206 - 390
Target Start/End: Original strand, 7293644 - 7293827
Alignment:
Q  206 aacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttc 305  Q
    |||||||||||||  | ||| |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||  ||| |||| ||||||||||||||| ||    
T  7293644 aacagtaaaatctcgacttt-ctctagtaacttaatgaaataaccattctcactaattactaaaagcaatttccactaaaa-ttataattttacccgatc 7293741  T
Q  306 tcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  7293742 tcacaaaatgaccaaaatacccctatgtccagaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 7293827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 36053274 - 36053485
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| || ||||||  |||| |||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  36053274 taacggtaaaatgtcactaacggttactaaatggtaatatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 36053371  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| | |  ||||||||||||||| ||||| | ||||||||||||||| ||||| |||||||||||||||| |  |||| |||||||| |||||||    
T  36053372 tctcacccagaactataattttacccgtcctcaccaaatgaccaaaatacccttaagttcaaaatgactaaaatacccttctatcacggaaacccatgaa 36053471  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  36053472 aatgcacccaatga 36053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 32493663 - 32493514
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||  ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  32493663 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattc-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 32493566  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| |||||||||    
T  32493565 tctcacccaaaattataattttacccgttctcacaaaatgactaaaataccc 32493514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 213 - 327
Target Start/End: Complemental strand, 39046234 - 39046121
Alignment:
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||||||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  39046234 aaatcttaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctcaccaaaaactataattttacccgttctcacaa 39046137  T
Q  312 tatgaccaaaataccc 327  Q
     |||||||||||||||    
T  39046136 aatgaccaaaataccc 39046121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 13275540 - 13275618
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||||||||||||||||||||| || |  ||||||||||||| |||||||||||||||||||||||    
T  13275540 atgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatg 13275618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 49047205 - 49047081
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||  | ||||| |   | | ||| |||||||||||| |||| ||||||||||| ||||| || |  |||||||| |||    
T  49047205 aaaagtaattctcaccaaaagttactaatttactctaacactcaaaatgaccaaaatatccctgagtccaaaatggctaaattacccttctaacacagaa 49047106  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | |||||||||||||||||||||||    
T  49047105 acccatgaaaatgcacccaatgatg 49047081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 31501913 - 31502004
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    ||||||| | ||||||| ||||||||||||||||| |||| |||||||||||| || |  ||||||||| ||| |||| |||||||||||||    
T  31501913 tttacccttactcacaaaatgaccaaaatacccctgagtctaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaa 31502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 39046325 - 39046233
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaa 175  Q
    ||||||||||||||||  |||||||||||||| | | || |||| | |||||  ||||||||| |  |||||||||| |||||||||||||||    
T  39046325 tgggcctaaccctcaatttaatggacttaacccactgctattcaaaccaaaatatttctacactccaaacggtatttaactaataacggtcaa 39046233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 12193070 - 12193125
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||||||  ||||||||||||||||||| ||||||||||||||||||    
T  12193070 tttacccttgctcacacaatgaccaaaatacccctaactccaaaatgactaaaata 12193125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 14419910 - 14419847
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatt-tcttttcacatcaaaaggtttcta 142  Q
    |||||||||||||||  |||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  14419910 taatgggcctaacccaaaacctaatggacttaacccattctctattcacatcaaaatgtttcta 14419847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 15441177 - 15441076
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  15441177 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 15441079  T
Q  327 cct 329  Q
    |||    
T  15441078 cct 15441076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 34240686 - 34240608
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| || |||| |||||||||||| || |  ||||||||| ||| |||| ||||||||||||||||||    
T  34240686 atgaccaaaatacctctgagtctaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaatgatg 34240608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 38424842 - 38424884
Alignment:
Q  305 ctcacaatatgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  38424842 ctcacaaaatgaccaaaatacccctgagtccaaaatgactaaa 38424884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 15822204 - 15822117
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccc 94  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||| |        |||||||| ||||||||||||||||||    
T  15822204 tctccaaaaatatcttatgaa-tgaaagtgtgaggaaatttctcataagtgta-gatttttatatcaagtctccttaatgggcctaaccc 15822117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 16569770 - 16569729
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataaga 54  Q
    |||||||||||||||||||||||||||||||||| | |||||    
T  16569770 aatatcttatgaaatgaaagtgtgaggaaatttcctctaaga 16569729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 16595892 - 16595925
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  16595892 aatatcttatgaaatgaaagtgtgaggaaatttc 16595925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 2189731 - 2189671
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||||||||||||  ||  |||||||||||| |||||||||| || ||||||||||||    
T  2189731 aaaagtaattctcaccccaaactataattttacctgttctcacaaaattaccaaaataccc 2189671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 9612075 - 9612151
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatga 388  Q
    ||||||||||||||||| ||||||||||||||||| ||    ||||| ||| |||| ||| ||||||||||||||||    
T  9612075 atgaccaaaatacccctgagtccaaaatgactaaattactcttctaatacgaaaactcatcaaaatgcacccaatga 9612151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 9839646 - 9839722
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatga 388  Q
    ||||||||||||||||| ||||||||||||||||| ||    ||||| ||| |||| ||| ||||||||||||||||    
T  9839646 atgaccaaaatacccctgagtccaaaatgactaaattactcttctaatacgaaaactcatcaaaatgcacccaatga 9839722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 11516879 - 11516979
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  11516879 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 11516978  T
Q  327 c 327  Q
    |    
T  11516979 c 11516979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 25291905 - 25291805
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  25291905 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 25291806  T
Q  327 c 327  Q
    |    
T  25291805 c 25291805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 30261742 - 30261643
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  30261742 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 30261644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 390
Target Start/End: Complemental strand, 32493532 - 32493476
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgatg 390  Q
    |||||||||||||||| |  ||||||||| |||| ||||||||||||||||||||||    
T  32493532 caaaatgactaaaatacccttctaacacgaaaactcatgaaaatgcacccaatgatg 32493476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 325
Target Start/End: Complemental strand, 18979627 - 18979529
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatac 325  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || ||||||||||    
T  18979627 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatac 18979529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 110974 - 110881
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaattt-cttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggt 172  Q
    |||||||||||||||  ||| |||||||||| ||| |||| || |||| | ||||| |||||||||| || || |||| || ||||||||||||    
T  110974 taatgggcctaacccaaaacataatggacttgacccattttctattcaaaccaaaatgtttctacactcaaaaaggtaattaactaataacggt 110881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 12247883 - 12247842
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataaga 54  Q
    |||||||| ||||||||||||||||||||||||| | |||||    
T  12247883 aatatcttgtgaaatgaaagtgtgaggaaatttcctctaaga 12247842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 26069370 - 26069239
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |        |  ||||||| | ||||||||||||||||||| |||| || ||||    
T  26069370 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagacta-gatttttgtagtaagtcccataaatgggcctaaccctcaacttaatagatttaa 26069273  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacac 145  Q
    || |||||| |||| | | |||| ||||||||||    
T  26069272 cccatttctattcaaaccaaaaatgtttctacac 26069239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 26070028 - 26069897
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |        |  ||||||| | ||||||||||||||||||| |||| || ||||    
T  26070028 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagacta-gatttttgtagtaagtcccataaatgggcctaaccctcaacttaatagatttaa 26069931  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacac 145  Q
    || |||||| |||| | | |||| ||||||||||    
T  26069930 cccatttctattcaaaccaaaaatgtttctacac 26069897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 26093815 - 26093684
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |        |  ||||||| | ||||||||||||||||||| |||| || ||||    
T  26093815 aatatcttatgaa-tgaaagtgtgaggaaatttctcataagacta-gatttttgtagtaagtcccataaatgggcctaaccctcaacttaatagatttaa 26093718  T
Q  113 ccaatttcttttcacatc-aaaaggtttctacac 145  Q
    || |||||| |||| | | |||| ||||||||||    
T  26093717 cccatttctattcaaaccaaaaatgtttctacac 26093684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 71 - 390
Target Start/End: Original strand, 38841 - 39162
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||| ||||| || |||||||| ||||  |||||| |||| | |||||  |||||||||| |  | ||||| |||| |||||||    
T  38841 aagtctccttattgggcctagccctccacttaatggacgtaactgatttctattcaaaccaaaaatgtttctacactctaaccggtaattcattaataac 38940  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa 269  Q
    |||||| |||||||||||  |||| ||| ||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| |||||||   |||    
T  38941 ggtcaaataacggtaaaatgtcactaacggtcaccaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaattactaaa 39040  T
Q  270 agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-c 368  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||| ||| |    
T  39041 agtaattcccaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgtaaacc 39140  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    | ||||||||||||||||||||    
T  39141 cttgaaaatgcacccaatgatg 39162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 5e-74; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 81 - 390
Target Start/End: Complemental strand, 23836408 - 23836096
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaa 179  Q
    |||||||||||||| | || |||||||||||||| |||||| |||| | |||||  |||||||||| |  | ||| | |||||||||||||||||| |||    
T  23836408 aatgggcctaaccccccacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggcaattcactaataacggtcaaataa 23836309  T
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattct 278  Q
    ||||||||  |||| ||| |||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||    
T  23836308 cggtaaaatgtcactaacggtcattaaacggtaaaatcttagttttactctagtaacttagcaaaacaactattctcactaa-tcactaaaagtaattct 23836210  T
Q  279 caccaaaacttataattttacccgttctcac-aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    |||||||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| | |  ||||||||| ||| |||||||||    
T  23836209 caccaaaaattataattttacccgttcttacaaaaatgaccaaaatacccctaagtccaaaatgactaaaacacccttctaacacgtaaacccatgaaaa 23836110  T
Q  377 tgcacccaatgatg 390  Q
    |||| |||||||||    
T  23836109 tgcatccaatgatg 23836096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 72 - 390
Target Start/End: Original strand, 42535149 - 42535467
Alignment:
Q  72 agtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacg 170  Q
    |||| ||||| |||| ||||||||| || |||| ||||||||  |||||||||||||||  ||| |||||||||| |  | ||||| ||||||||||| |    
T  42535149 agtctccttattgggtctaaccctccacttaatagacttaactcatttcttttcacatctcaaaagtttctacactctaaccggtaattcactaataatg 42535248  T
Q  171 gtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaa 269  Q
    ||||| |||||||||||  |||| ||| |||||||||| ||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||| ||| |||    
T  42535249 gtcaagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttt-actctagtaacttagtaaaataactattctcactaat-cactaaa 42535346  T
Q  270 agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-c 368  Q
    || ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |    
T  42535347 agcaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacc 42535445  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    ||||||||||||| ||||||||    
T  42535446 catgaaaatgcactcaatgatg 42535467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 13 - 390
Target Start/End: Complemental strand, 36890448 - 36890071
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |         | ||||||| | ||||||||||||||||||| ||||||||||||    
T  36890448 aatatcttatgaaatgaaagtgtgaggaaatttctcataagactaggtttttgtagt-aagtcccataaatgggcctaaccctcaacttaatggacttaa 36890350  T
Q  113 ccaatttcttttcacatcaaaagg-tttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    |  |||||| |||| |  ||||   ||||||||| |  || ||||  ||||||||||||||||| |||||||| || ||||  | | |||||||||| ||    
T  36890349 ctcatttctattcaaacaaaaaatatttctacactccaaatggtaaatcactaataacggtcaaataacggtagaatatcattatcggtcactaaacggt 36890250  T
Q  212 aaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| |||||  ||| |||||||||||||| |  |||||||||||||||||||||||| |    
T  36890249 aaaatcttaattttactctagtaacttagtaaaacaattattctcactaa-ccactaaaagtaattctcatc-gaacttataattttacccgttctcata 36890152  T
Q  311 atatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    | ||||||||||||||||||||| |||||||||||||||| |  ||||||| ||||| |||||||||||||||||||||||    
T  36890151 aaatgaccaaaatacccctaagttcaaaatgactaaaatacccttctaacatggaaacccatgaaaatgcacccaatgatg 36890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 136 - 390
Target Start/End: Original strand, 25602634 - 25602891
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt--ttactctagt 233  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||||  |||| ||| |||||||||| |||||| |||||||  ||||||||||    
T  25602634 gtttctacacacacaacggtaaatcactaataacggtcaaataacggtaaaatgtcaccaacggtcactaaacggtaaaaccttaattatttactctagt 25602733  T
Q  234 aacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaag 332  Q
    ||||||| ||||||||  |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25602734 aacttagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacttataattttacccgttctcacaaaatgaccaaaatacccctaag 25602832  T
Q  333 tccaaaatgactaaaataacactctaacac-ggaaaccatgaaaatgcacccaatgatg 390  Q
    ||  |||||||||||||| |  |||||||| |||| |||||||||||||||||||||||    
T  25602833 tcttaaatgactaaaatacccttctaacacgggaacccatgaaaatgcacccaatgatg 25602891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 17367302 - 17367676
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||| | ||||||||||||||||||||| ||||| ||| |        | |||||| |||||||||||||||||||| ||  |||||||||||    
T  17367302 aatatcttatggagtgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtctccttaatgggcctaaccctccactcaatggacttaa 17367400  T
Q  113 ccaatttcttttcacatc--aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    || |||||| || |||||  |||| |||||||||| |  || |||| |||||| ||||||||||| |||||||||||  |||| ||| |||||||||| |    
T  17367401 cccatttctatttacatctcaaaatgtttctacactct-aatggtaattcacttataacggtcaagtaacggtaaaatgtcactaacggtcactaaacgg 17367499  T
Q  211 taaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||||||||||| || || ||||||||| |||||||||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  17367500 taaaatcttaatttcacgctggtaacttagtaaaacaactattctcactaa-ccactaaaagtaattctcaccaaaacttataa-tttacccattctcac 17367597  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacac-tctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    || |||| ||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  17367598 aaaatga-caaaata-ccctaagtctaaaatgactaaaat-acacttctaacacggaaaccatgaaaatgtacccaatgatg 17367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 25875620 - 25875323
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    |||||||||||||||||||||||||||||||| |||||| ||||  ||| ||| ||||||||||  ||||| |||||||||||||||||||             
T  25875620 tgggcctaaccctcaacctaatggacttaacccatttctattcaactcacaaatgtttctacacatacaacagtatttcactaataacggt--------- 25875530  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcac 281  Q
      ||||  |||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||  |||||||   |||||||||||||||    
T  25875529 --aaaatgtcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaacggttcccactaattactaaaagtaattctcac 25875432  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgca 380  Q
    |||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||||||||||||    
T  25875431 caaaacctataa-tttacccgttctcaccaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaactcatgaaaatgca 25875333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 19794348 - 19794135
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| ||| ||||||||||  |||||||| ||||||||||||||||||||| |||| ||| ||||| |||||| ||| |||||||||    
T  19794348 taacggtaaaatatcactaacggtcactaaacgataaaatctcaattttactctagtaacttagcaaaataaccattctcactaat-cactaaaagtaat 19794250  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||| | |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  19794249 tcccaccaata-ttataattttacccgttctcgcaaaatggccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaa 19794151  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  19794150 aatgcacccaatgatg 19794135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 27262288 - 27262665
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | |||||  | |        | ||||||||||||||||||||||| ||||| || |||||| |||    
T  27262288 aatatcttatgaaatgaaagtgtgaggaaatttcctctaagacaa-ggtttttatagcaagtccccttaatgggcctaactctcaaacttaatggattta 27262386  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||   ||| ||| |||| |||||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||  ||| |||||||||| |    
T  27262387 acccatttcaactca-atctaaaatgtttctacacacacaacggtgtttcactattaacggtcaattaacgataaaacatcatcaacggtcactaaacgg 27262485  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaacaactattctt--actaattcacaaaagtaattctcaccaaaacttataattttacccgttctc 307  Q
    |||||| | |||| ||||||||||||||  | ||||  | |   |    || |||  || ||| ||||||||||| || |||||||||||||||||||||    
T  27262486 taaaatatcaattattactctagtaactcggtaaaaataatggcccccaacaaat--actaaaataattctcaccgaa-cttataattttacccgttctc 27262582  T
Q  308 acaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||    |||||||||||||||||    
T  27262583 acaaaatgaccaaaatacccctaagtccaaaatgactaaaataccattctaacacggaaacccacgaaatgcacccaatgatg 27262665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 104 - 390
Target Start/End: Original strand, 32466423 - 32466710
Alignment:
Q  104 tggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtca 202  Q
    ||||||||||| |||||| |||| | |||||  |||||||||| |  | ||| | ||||||||||||||| || ||||||||| |  |||| ||| ||||    
T  32466423 tggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggcaattcactaataacggttaaataacggtaagatgtcactaacggtca 32466522  T
Q  203 ctaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttaccc 301  Q
    |||||| ||||||||| |||||||||||| |||||||   ||| |||||||||  |||| |||| |||||||| |||||| |||||||| ||||||||||    
T  32466523 ctaaacggtaaaatctcaattttactctaataacttaatgaaataactattctctctaa-tcactaaaagtaactctcacaaaaacttacaattttaccc 32466621  T
Q  302 gttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    |||||||| | ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||||| |||||||||||||| ||||||    
T  32466622 gttctcacca-atgaccaaaatacccataagtctaaaatgactaaaatacccttctaacacggaaacctatgaaaatgcaccccatgatg 32466710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 198 - 390
Target Start/End: Complemental strand, 36982076 - 36981885
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattt 296  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| ||||  |||| ||||||||||| |||||||| |||||||||    
T  36982076 tgtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcacta--tcactaaaagtaattcccaccaaaaattataattt 36981980  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || |||||||||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||| || |||||||||| |||||||||    
T  36981979 tatccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaataccattctaacacggaaacccgtgaaaatgcatccaatgatg 36981885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 9652519 - 9652309
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    |||||||||||  |||| |||||||||||||| ||||||||| ||||| |||||||||||||||  ||| ||||||||| |||||| ||| || ||||||    
T  9652519 taacggtaaaatgtcactaactgtcactaaacggtaaaatctcaattt-actctagtaacttagtgaaataactattctcactaat-cactaa-gtaatt 9652423  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    | ||||| || |||||||||||||| ||||||||| ||||||||||| || ||||||| ||||||||||||||| |  ||||||||||||| ||||||||    
T  9652422 cccaccagaa-ttataattttacccattctcacaaaatgaccaaaatgcctctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaa 9652324  T
Q  376 atgcacccaatgatg 390  Q
    |||||||||||||||    
T  9652323 atgcacccaatgatg 9652309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 463337 - 463550
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||  |||||| ||| |||||||||    
T  463337 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattcgcactaat-cactaaaagtaat 463434  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||| || ||| |||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  463435 tctcccccaaaattataattttactcgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 463534  T
Q  375 aatgcacccaatgatg 390  Q
    | ||||||||||||||    
T  463535 attgcacccaatgatg 463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 8891825 - 8892037
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| || |||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  8891825 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-accctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 8891922  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||||| |  ||||||||| ||||| |||||    
T  8891923 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatactcctaagtctaaaatggctaaaatacccttctaacacgaaaacctatgaa 8892021  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  8892022 aatgcacccaatgatg 8892037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 43642598 - 43642386
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| || |||||| ||||| ||||||||||||||   |||  |||||||| |||||| ||| |||||||||    
T  43642598 taacggtaaaatgtcactaacggtcactaaacggtgaaatctcaattt-actctagtaacttaatgaaatgactattctcactaat-cactaaaagtaat 43642501  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||  ||| |||||||    
T  43642500 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacataaacccatgaa 43642402  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  43642401 aatgcacccaatgatg 43642386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 175 - 390
Target Start/End: Original strand, 22863542 - 22863756
Alignment:
Q  175 attaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagta 273  Q
    |||||||||||||  |||| ||| || ||||||| ||||||||  ||||| ||||||||||||||| |||| |||||| || |||||| ||| |||||||    
T  22863542 attaacggtaaaatgtcactaacggttactaaacggtaaaatcccaattt-actctagtaacttagtaaaataactatcctcactaat-cactaaaagta 22863639  T
Q  274 attctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatg 372  Q
    |||| |||||||| |||||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||| |||| |  ||||||||||||| ||| |    
T  22863640 attcccaccaaaa-ttataattttacccgtcctcacaaaatgatcaaaatacccctaagtctaaaatgactacaatacccttctaacacggaaacccacg 22863738  T
Q  373 aaaatgcacccaatgatg 390  Q
    ||||||||||||||||||    
T  22863739 aaaatgcacccaatgatg 22863756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 20626968 - 20626756
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| || ||||||||||| ||||||||| ||||| ||||||||||||||   ||| || |||||| |||||| ||| |||||||||    
T  20626968 taacggtaaaatgtcactaattgtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataattattctcactaat-cactaaaagtaat 20626871  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||  ||| |||||||    
T  20626870 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacaccaaaacccatgaa 20626772  T
Q  375 aatgcacccaatgatg 390  Q
    |||||| |||||||||    
T  20626771 aatgcatccaatgatg 20626756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 25265027 - 25264875
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  25265027 gtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctcaccaaaacttataattttatccgttctca 25264930  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacg 363  Q
    ||| |||||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  25264929 caaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacg 25264875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 68 - 390
Target Start/End: Complemental strand, 4447843 - 4447522
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaat 166  Q
    ||||||||||||||||| ||||||| ||||| || |||||| |||||  |||||   ||||   |||| ||||||||||  ||||| ||| || ||||||    
T  4447843 atcaagtccccttaatgagcctaactctcaaacttaatggatttaactcatttcaactcactctaaaatgtttctacac--acaacagtaatttactaat 4447746  T
Q  167 aacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattca 265  Q
    ||||||||| |||||||||||||| || |||  ||||||||  |||||| ||||||| ||||||||||||||  | |||  ||    ||| || || |      
T  4447745 aacggtcaaataacggtaaaacattaccaacgatcactaaatggtaaaaccttaattattactctagtaactcggtaaactaatggctctcaccaaatac 4447646  T
Q  266 caaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgga 365  Q
     |||| |||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||    ||||| |||||    
T  4447645 taaaaataattctcaccaaa-cttataattt-acccgttctctcaaaatgaccaaaatacccctaagttcaaaatgactaaaatacgcttctaatacgga 4447548  T
Q  366 aacc-atgaaaatgcacccaatgatg 390  Q
    |||| ||||||||||| | |||||||    
T  4447547 aacctatgaaaatgcatcaaatgatg 4447522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 23805949 - 23805739
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| ||| ||||||  |||||||| ||||| ||||| ||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  23805949 taacggtaaaatgtcactaacggtcgctaaacgataaaatctcaattt-actcttgtaacttaatgaaataactattctcactaat-cactaaaagtaat 23805852  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| |||||||||||| | ||||||||| |||||||||||||||||||||| |||| |||||||||  |  ||||||||| ||| |||| ||    
T  23805851 tctcacccaaaattataattttactcattctcacaaaatgaccaaaatacccctaagtctaaaa-gactaaaatgcccttctaacacgaaaacccataaa 23805753  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  23805752 aatgcacccaatga 23805739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 136 - 390
Target Start/End: Complemental strand, 23821445 - 23821189
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagta 234  Q
    |||||||||| | ||||||||  | |||||||||||||| |||||||||||| |||   ||| |||||  ||| |||||||  ||||| |||| ||||||    
T  23821445 gtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatctacaacagtcacataacggtaaaatactaattattaccctagta 23821346  T
Q  235 acttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagt 333  Q
    |||||| |||| ||  ||||| |||||  ||| |||| ||||||||||||||| |||  | ||||| | | |   ||| || |||||||||||||| |||    
T  23821345 acttagcaaaataatgattctcactaaa-cactaaaaataattctcaccaaaaattactaatttactcttacatccaaaattaccaaaatacccctgagt 23821247  T
Q  334 ccaaaatgactaaaataacactctaacacggaa-accatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| || |  ||||||||||||  |||||||||||||||||||||||    
T  23821246 ccaaaatgactaaattacccttctaacacggaatcccatgaaaatgcacccaatgatg 23821189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 136 - 390
Target Start/End: Complemental strand, 23830524 - 23830268
Alignment:
Q  136 gtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagta 234  Q
    |||||||||| | ||||||||  | |||||||||||||| |||||||||||| |||   ||| |||||  ||| |||||||  ||||| |||| ||||||    
T  23830524 gtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatctacaacagtcacataacggtaaaatactaattattaccctagta 23830425  T
Q  235 acttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagt 333  Q
    |||||| |||| ||  ||||| |||||  ||| |||| ||||||||||||||| |||  | ||||| | | |   ||| || |||||||||||||| |||    
T  23830424 acttagcaaaataatgattctcactaaa-cactaaaaataattctcaccaaaaattactaatttactcttacatccaaaattaccaaaatacccctgagt 23830326  T
Q  334 ccaaaatgactaaaataacactctaacacggaa-accatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| || |  ||||||||||||  |||||||||||||||||||||||    
T  23830325 ccaaaatgactaaattacccttctaacacggaatcccatgaaaatgcacccaatgatg 23830268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 31145659 - 31145562
Alignment:
Q  294 ttttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || |  ||||||||| ||| ||||||||||||||| |||||||    
T  31145659 ttttacccgtactcacaaaatgaccaaaatacccctaagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcaccaaatgatg 31145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 24293992 - 24293918
Alignment:
Q  316 accaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| ||||||||||||||||| || |  |||||||||||| |||||||||||||||||||||||    
T  24293992 accaaaatacccctgagtccaaaatgactaaattacccttctaacacggaacccatgaaaatgcacccaatgatg 24293918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 390
Target Start/End: Original strand, 68711 - 68835
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||  | ||||| | | | | ||| ||||||||||||| ||  ||||||||||||||||| || || |||||||| |||    
T  68711 aaaagtaattctcaccaaaagttactaatttactcttacactcaaaatgaccaaaatactccagagtccaaaatgactaaattaccattctaacacagaa 68810  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | |||||||||||||||||||||||    
T  68811 acccatgaaaatgcacccaatgatg 68835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 29023965 - 29024056
Alignment:
Q  300 ccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||| || |  ||||||||  ||||| |||||||||||||||||||||    
T  29023965 ccgttctcacaaaatgatcaaaatacccctaagtctaaaatgactaaattacccttctaacacaaaaacctatgaaaatgcacccaatgatg 29024056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 723152 - 723230
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||||||| |||||||||||||| ||||||||    
T  723152 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcactcaatgatg 723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 24885385 - 24885503
Alignment:
Q  272 taattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-cca 370  Q
    |||| |||||||||| |||  | ||||||| | ||||||| ||||| ||||||||||| ||||||||||||||||| || |  ||||||||| ||| |||    
T  24885385 taatcctcaccaaaaattactaatttacccttactcacaaaatgactaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaaccca 24885484  T
Q  371 tgaaaatgcacccaatgat 389  Q
    | |||||||||||||||||    
T  24885485 ttaaaatgcacccaatgat 24885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 71 - 296
Target Start/End: Original strand, 28974588 - 28974816
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaaccta-atggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataa 168  Q
    ||||||||  ||||||||||||||| || ||  ||||| |||||| ||| |  |||| ||| |||| |||||||||| |||||||||| |||||||||||    
T  28974588 aagtcccccaaatgggcctaaccctaaagcttcatggatttaacccattccaattcaaatctaaaatgtttctacacacacaacggtaattcactaataa 28974687  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac- 266  Q
    |||||||| |||||||||| |  || |||  ||||| ||  || ||| ||||||| |||||||| |||||||| ||||||    |||| |||||  |||     
T  28974688 cggtcaataaacggtaaaatactaccaacgatcacttaagggtgaaaccttaattattactctaataacttagtaaaacattggttctcactaa-acact 28974786  T
Q  267 aaaagtaattctcaccaaaacttataattt 296  Q
    | |||||||||||||||||| |||||||||    
T  28974787 agaagtaattctcaccaaaatttataattt 28974816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 7322249 - 7322372
Alignment:
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa 367  Q
    ||||||||||||| ||||| |||  | ||||| | | | | ||| ||||||||||||||||| ||||||||||||||||| || || | |||| | ||||    
T  7322249 aaagtaattctcatcaaaagttactaatttacgcttacacccaaaatgaccaaaatacccctgagtccaaaatgactaaattaccattttaactcagaaa 7322348  T
Q  368 -ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||    
T  7322349 cccatgaaaatgcacccaatgatg 7322372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 19433292 - 19433214
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||| ||||||||||| ||||||||||||||||| || |  ||||||||||||| ||||||||||||| |||||||||    
T  19433292 atgacaaaaatacccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcatccaatgatg 19433214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 271717 - 271820
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaa 179  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||  || ||||  ||| ||  | |||||||||| |||||||||||||||| | |||    
T  271717 aatgggcctaaccctcaacttaatggacttaacccatttctattcaagtcaaaaatatttttatccacacaacggtaattcactaataacggtcgaataa 271816  T
Q  180 cggt 183  Q
    ||||    
T  271817 cggt 271820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 389
Target Start/End: Original strand, 16446494 - 16446589
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||| | ||||||| |||||||||||||| || |||| |||||||||||| || |  ||||||||| ||| |||||||||||||| |||||||    
T  16446494 tttacccttactcacaaaatgaccaaaatacctcttagtctaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacacaatgat 16446589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 24570997 - 24570882
Alignment:
Q  73 gtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacgg 171  Q
    ||||||| ||||||||||||||| ||| |||||||||||||| |||||  |||| ||| |||| |||||||||| |  |||||||  | | |||||||||    
T  24570997 gtcccctaaatgggcctaaccctaaacttaatggacttaacctatttccattcaaatctaaaatgtttctacactctaaacggtaaattaataataacgg 24570898  T
Q  172 tcaattaacggtaaaa 187  Q
    | | ||||||||||||    
T  24570897 taacttaacggtaaaa 24570882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 24086911 - 24086838
Alignment:
Q  317 ccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||| ||||||||||||||||| || |  ||||| ||| ||| ||||||||||||||||||||||    
T  24086911 ccaaaatacccctgagtccaaaatgactaaattacccttctaatacgaaaacccatgaaaatgcacccaatgat 24086838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 22579365 - 22579286
Alignment:
Q  313 atgaccaaaatacccc-taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||| |||||||||| ||||||||||||||| ||| || |  ||||||||||||| ||||||||||||| |||||||||    
T  22579365 atgactaaaataccccctaagtccaaaatgaccaaattacccttctaacacggaaacccatgaaaatgcatccaatgatg 22579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 15633846 - 15633908
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaactta 239  Q
    ||||||||||   |||| ||| |||||||||||||||||||||| |||||||||| |||||||    
T  15633846 taacggtaaagtgtcactaacggtcactaaacagtaaaatcttagttttactctaataactta 15633908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 25602509 - 25602542
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  25602509 aatatcttatgaaatgaaagtgtgaggaaatttc 25602542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 22579507 - 22579451
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||| |||||||||| ||||||| ||  |||||||||||||||| ||||||||||||    
T  22579507 aaaatgtttctacacacacaacgataaatcactaataacggtcacttaacggtaaaa 22579451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 347
Target Start/End: Complemental strand, 19668607 - 19668573
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||||||||||||||||||||| |||||||||||||    
T  19668607 atgaccaaaatacccctaagttcaaaatgactaaa 19668573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 18995903 - 18995960
Alignment:
Q  293 attttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||||| | ||||| | ||||||||||||||||| |||  |||||||||||||||    
T  18995903 attttacccttgctcaccaaatgaccaaaatacccctgagtttaaaatgactaaaata 18995960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 350
Target Start/End: Original strand, 20280164 - 20280209
Alignment:
Q  305 ctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| |||||||||| | |||||||| ||||||||||||||||    
T  20280164 ctcacaaaatgaccaaaaaatccctaagttcaaaatgactaaaata 20280209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 141; Significance: 2e-73; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 83 - 390
Target Start/End: Original strand, 164765 - 165071
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    |||| |||||||||||| |||||||||||||| |||||| |||| |||||| | |||||||||    | ||||| |||||||||||||||||| ||||||    
T  164765 tgggtctaaccctcaacttaatggacttaacccatttctattca-atcaaatg-tttctacactataaccggtaattcactaataacggtcaagtaacgg 164862  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcacc 282  Q
    |||||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||    ||||||||||| ||||    
T  164863 taaaatgtcactaacagtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaataactaaaagtaattcccacc 164962  T
Q  283 aaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcac 381  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |  || |||||||||| |||| ||||||||     
T  164963 aaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagttcaaaatgactaaaatacccttccaacacggaaacccattaaaatgcat 165062  T
Q  382 ccaatgatg 390  Q
     ||||||||    
T  165063 tcaatgatg 165071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 165882 - 165669
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| |||  ||| ||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  165882 taacggtaaaatatcactaacgatcattaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 165785  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||| |  ||||||||||||| ||| |||    
T  165784 tctcacccaaaactataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgacttaaatacccttctaacacggaaacccacgaa 165685  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  165684 aatgcacccaatgatg 165669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 140; Significance: 7e-73; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 70 - 390
Target Start/End: Original strand, 4820 - 5142
Alignment:
Q  70 caagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataa 168  Q
    |||||| ||||| | |||||||||||| || |||||||||||| | |||||| |||| | |||||  |||||||||| |  | ||||| |||||||||||    
T  4820 caagtctccttattaggcctaaccctccacttaatggacttaaaccatttctattcaaaccaaaaatgtttctacactctaaccggtaattcactaataa 4919  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-a 267  Q
    ||||||| ||| |||||||  |||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||||||   |||| |||||| ||| |    
T  4920 cggtcaagtaaaggtaaaatgtcactaacggtcactaaacggtaaaatcttaattttactctagtaacttagtaaaacaatggttctcactaat-cacta 5018  T
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa 367  Q
    |||  |||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |  |||||||||||||    
T  5019 aaaacaattctcaccaacaattataattttacccgtcctcacaaaatgaccaaaatacccctaagcccaaaatgactaaaatacccttctaacacggaaa 5118  T
Q  368 -ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||    
T  5119 cccatgaaaatgcacccaatgatg 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 140; Significance: 7e-73; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 9657 - 10031
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |         | |||||  |||| |||||| ||||||  || ||||||||||||    
T  9657 aatatcttatgaaatgaaagtgtgaggaaatttctcataagtgtaggtttttatact-aagtcttcttattgggccaaacccttcacttaatggacttaa 9755  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    |  |||||| |||||||||||| ||||||||||  |||||||||||  |||||||||| |||| ||||  |||||  |||| ||| |||| ||| | |||    
T  9756 cacatttctattcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggta 9853  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||||| ||||||||||||||||||| |||| |||||||||  ||| | ||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  9854 aaatcttagttttactctagtaacttagtaaaataactattctccctact-cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacaa 9951  T
Q  312 tatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||||||||    
T  9952 aatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatg 10031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 5043 - 5417
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |         | |||||  |||| |||||| ||||||  || ||||||||||||    
T  5043 aatatcttatgaaatgaaagtgtgaggaaatttctcataagtgtaggtttttatact-aagtcttcttattgggccaaacccttcacttaatggacttaa 5141  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    |  |||||| |||||||||||| ||||||||||  |||||||||||  |||||||||| |||| ||||  |||||  |||| ||| |||| ||| | |||    
T  5142 cacatttctattcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggta 5239  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||||| ||||||||||||||||||| |||| |||||||||  ||| | ||| ||||||||||| |||||||| |||||||||||||||||||||| |    
T  5240 aaatcttagttttactctagtaacttagtaaaataactattctccctact-cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacca 5337  T
Q  312 tatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||||||||    
T  5338 aatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatg 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 138; Significance: 1e-71; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 83 - 390
Target Start/End: Original strand, 695 - 1003
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    ||||||||||||||||| |||||||||||||| |||||| || | || |||| |||||||||| |  | ||||| || |||||||| |||||| ||||||    
T  695 tgggcctaaccctcaacttaatggacttaacccatttctattaaaataaaaatgtttctacactctaaccggtaattaactaataatggtcaagtaacgg 794  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcac 281  Q
    |||||  |||| ||| |||||||||| ||||||||||| |||||||||| |||||||| |||| || |||||| ||||| |||| ||||||||||  |||    
T  795 taaaatgtcactaacggtcactaaacggtaaaatcttagttttactctaataacttagtaaaataattattctcactaa-tcactaaaagtaatttccac 893  T
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgca 380  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||| |  ||||||||||||| |||||||||||||    
T  894 caaaaattataattttaccggttctcacaaaatgaccaaaatacccctaaattcaaaatgactaaaatacccttctaacacggaaacccatgaaaatgca 993  T
Q  381 cccaatgatg 390  Q
    || |||||||    
T  994 ccaaatgatg 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 137; Significance: 5e-71; HSPs: 7)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 81 - 390
Target Start/End: Original strand, 22061 - 22359
Alignment:
Q  81 aatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaac 180  Q
    ||||||||||||||||||| ||| |||||||||| |||||| |||||||||||| |||||| |||  |||||||||| ||||||||||||||            
T  22061 aatgggcctaaccctcaacttaacggacttaacctatttctattcacatcaaaatgtttcttcacatacaacggtatatcactaataacggt-------- 22152  T
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaag-taattctc 279  Q
       |||||||| | ||| ||||| |||| ||||||| ||||||||| ||||||||||||| ||||||||||  || |||||  ||| |||| || | |||    
T  22153 ---aaaacatctccaacggtcacaaaacggtaaaatattaattttaatctagtaacttagtaaaacaactacgctcactaac-cactaaaggtactcctc 22248  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgc 379  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||    
T  22249 accaaaacttataattttacccgttcacacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaatcatgaaaatgc 22348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 88 - 337
Target Start/End: Original strand, 31767 - 32016
Alignment:
Q  88 ctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||||||||||| |||||||||||||  |||||| |||||||||||| ||||||||||  |||| ||||| ||||||||||||||||||||||||||||     
T  31767 ctaaccctcaacttaatggacttaacgtatttctattcacatcaaaatgtttctacacatacaatggtatatcactaataacggtcaattaacggtaaac 31866  T
Q  188 catcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaa 286  Q
    ||||   ||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||||| || |||||  ||| ||| ||| | ||||| ||||    
T  31867 catcttcaacagtcactaaacggtaaaatcttaattttactctagtaacttagtaaaaaaactatgctcactaa-ccactaaaggtactcctcactaaaa 31965  T
Q  287 cttataattttacccgttctcacaatatgaccaaaatacccctaagtccaa 337  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  31966 cttataattttacccgttcacacaaaatgaccaaaatacccctaagtccaa 32016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 88 - 337
Target Start/End: Complemental strand, 47239 - 46990
Alignment:
Q  88 ctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||||||||||| |||||||||||||  |||||| |||||||||||| ||||||||||  |||| ||||| ||||||||||||||||||||||||||||     
T  47239 ctaaccctcaacttaatggacttaacgtatttctattcacatcaaaatgtttctacacatacaatggtatatcactaataacggtcaattaacggtaaac 47140  T
Q  188 catcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaa 286  Q
    ||||   ||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||||| || |||||  ||| ||| ||| | ||||| ||||    
T  47139 catcttcaacagtcactaaacggtaaaatcttaattttactctagtaacttagtaaaaaaactatgctcactaa-ccactaaaggtactcctcactaaaa 47041  T
Q  287 cttataattttacccgttctcacaatatgaccaaaatacccctaagtccaa 337  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47040 cttataattttacccgttcacacaaaatgaccaaaatacccctaagtccaa 46990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 180 - 388
Target Start/End: Complemental strand, 27618 - 27415
Alignment:
Q  180 cggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattct 278  Q
    |||||||||||||  ||| |||||||||| |||||||  |||||  ||| ||| |||||||| |||||||||||||| |||||| |  |||||| | |||    
T  27618 cggtaaaacatcattaacggtcactaaacggtaaaatactaattactacactaataacttagtaaaacaactattctcactaatccttaaaagtgactct 27519  T
Q  279 caccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatg 378  Q
    ||| |||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |  |||||     | ||||||||||||    
T  27518 cacaaaa--ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaataactaaaatacccttctaa----aataccatgaaaatg 27425  T
Q  379 cacccaatga 388  Q
    ||||||||||    
T  27424 cacccaatga 27415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21994 - 22038
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  21994 aatatcttatgaaatgaaagtgtgaggaaatttctcataggagta 22038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31693 - 31737
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  31693 aatattttatgaaatgaaagtgtgaggaaatttctcataagagta 31737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 47313 - 47269
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagta 57  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  47313 aatattttatgaaatgaaagtgtgaggaaatttctcataagagta 47269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 136; Significance: 2e-70; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 7652 - 8026
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |         | |||||  |||| |||||| ||||||  || ||||||||||||    
T  7652 aatatcttatgaaatgaaagtgtgaggaaatttctcataagtgtaggtttttatact-aagtcttcttattgggccaaacccttcacttaatggacttaa 7750  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    |  |||||| |||||||||||| ||||||||||  |||||||||||  |||||||||| |||| ||||  |||||  |||| ||| |||| ||| | |||    
T  7751 cacatttctattcacatcaaaatgtttctacacatacaacggtatta-actaataacgatcaagtaacaataaaatgtcactaacggtcaataa-cggta 7848  T
Q  213 aaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaa 311  Q
    |||||||| ||||||||||||||||||| |||| |||||||||  ||| | ||| ||||||||||| |||||||| |||||||||||||||||||||| |    
T  7849 aaatcttagttttactctagtaacttagtaaaataactattctccctact-cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacca 7946  T
Q  312 tatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||||||||    
T  7947 aatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatg 8026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 135; Significance: 7e-70; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 83 - 390
Target Start/End: Complemental strand, 2761 - 2453
Alignment:
Q  83 tgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaagg-tttctacacccacaacggtatttcactaataacggtcaattaacg 181  Q
    ||||||||||||||||| |||||||||||||| |||||  |||| | |||||   ||||||||| |  | ||||| ||  |||||||||||||| |||||    
T  2761 tgggcctaaccctcaacttaatggacttaacccatttccattcaaaccaaaaaaatttctacactctaaccggtaatttgctaataacggtcaagtaacg 2662  T
Q  182 gtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca 280  Q
    ||||||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||  |||| ||||| |||| |||||||||||||     
T  2661 gtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaacaacggttctcactaa-tcactaaaagtaattctcg 2563  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    ||||||||||||| |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |  || |||||||||| ||||||||||||    
T  2562 ccaaaacttataa-tttacccgttcttacaaaatgaccaaagtacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgc 2464  T
Q  380 acccaatgatg 390  Q
    |||||||||||    
T  2463 acccaatgatg 2453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 133; Significance: 1e-68; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 24 - 390
Target Start/End: Complemental strand, 11321 - 10955
Alignment:
Q  24 aaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttctt 122  Q
    |||||||||||||||||||||||| ||||||||| |         | ||||| || ||||||||||||| ||||| || ||||||||||||| |||| |     
T  11321 aaatgaaagtgtgaggaaatttctcataagagtaagtttttatact-aagtctccctaatgggcctaactctcaaacttaatggacttaacccatttata 11223  T
Q  123 ttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaat 222  Q
    ||||  || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||| |||||||||| ||||| || ||||    
T  11222 ttcaattcgaaatgtttctacacccacaacggtatttcactaataatggtcaat-aacggtaaaatatcaccaacggtcactaaacggtaaa-tcctaat 11125  T
Q  223 t--ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgacca 319  Q
    |  ||||||||||||||||| ||||| ||  |  | |||||| ||| |||| |||||| |||||||||||||||||| |||||||||||||| |||||||    
T  11124 tatttactctagtaacttagtaaaaccacggtgatcactaat-cactaaaactaattcccaccaaaacttataattt-acccgttctcacaaaatgacca 11027  T
Q  320 aaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| |||||||||||||||| |  |||||||| |||| |||||||||||||||||||||||    
T  11026 aaatacccctaagttcaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatgatg 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 133; Significance: 1e-68; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 131 - 388
Target Start/End: Complemental strand, 112191 - 111932
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactc 229  Q
    |||| |||||||||| ||| ||| || |||||||||||||||||| ||||||||||| ||  | ||| |||||||||| |||||| ||||||| ||||||    
T  112191 aaaatgtttctacacacaccacgataattcactaataacggtcaaataacggtaaaatatttccaacggtcactaaacggtaaaaccttaattattactc 112092  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    ||||||||||| ||||||||  |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  112091 tagtaacttagtaaaacaacagttctcactaat-cactaaaagtaattctcaccaaaacttataattttacccgttctcacaaaatgaccaaaatactcc 111993  T
Q  329 taagtccaaaatgactaaaataacactctaacac-ggaaaccatgaaaatgcacccaatga 388  Q
    |||||||||||||||||||||| |  |||||||| |||| ||||| |||||||||||||||    
T  111992 taagtccaaaatgactaaaatacccttctaacacgggaacccatggaaatgcacccaatga 111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 102453 - 102358
Alignment:
Q  296 ttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||||||||| || || |||||||   ||| ||| |||||||||||||||||||    
T  102453 ttacccgtactcacaagatgaccaaaatacccgtaagtccaaaatgactaaactaccattctaacataaaaacccacgaaaatgcacccaatgatg 102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 132526 - 132645
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| |||| |||||||||| |||  | |||| || | ||||||| ||||||||||||||| | ||||||||||||||||| || |  | ||||||| ||    
T  132526 aaaaataatcctcaccaaaaattactaatttatccttactcacaaaatgaccaaaatacccatgagtccaaaatgactaaattacccttataacacgaaa 132625  T
Q  367 a-ccatgaaaatgcacccaa 385  Q
    | |||| |||||||||||||    
T  132626 acccattaaaatgcacccaa 132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 112310 - 112269
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataaga 54  Q
    |||||||||||||||||||||||||||||||||| | |||||    
T  112310 aatatcttatgaaatgaaagtgtgaggaaatttcctctaaga 112269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 102590 - 102534
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    |||| |||||||||| ||||||||||  | |||||||||||||| ||||||||||||    
T  102590 aaaatgtttctacacacacaacggtaaattactaataacggtcacttaacggtaaaa 102534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 131; Significance: 2e-67; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 1798 - 2165
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaa 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |         | | ||| |   |||||||||||||||||| |||||||||||||    
T  1798 aatatcttatgaaatgaaagtgtgaggaaatttctcataagagtaggtttttatagt-atgtctcacaaatgggcctaaccctcaaactaatggacttaa 1896  T
Q  113 ccaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagta 212  Q
    || |||||| |||||||||||| |||||||||| |  | ||||| |||||||||||||||           |||| ||||| ||| |||||||||| |||    
T  1897 cccatttctattcacatcaaaatgtttctacacactaaccggtaattcactaataacggt-----------aaaatatcaccaacggtcactaaacggta 1985  T
Q  213 aaa-tcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcaca 310  Q
    ||| ||| ||||||||||| ||||||||| ||||||||  |||  |||||| ||| ||||| ||||||||||||||| ||||||||||||||||| |||     
T  1986 aaaatctaaattttactcttgtaacttagtaaaacaacggttcccactaat-cactaaaagcaattctcaccaaaacctataattttacccgttcacact 2084  T
Q  311 atatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    | |||||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||||||||||||    
T  2085 aaatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatg 2165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 25 - 316
Target Start/End: Complemental strand, 11407 - 11120
Alignment:
Q  25 aatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttctttt 124  Q
    ||||||||||||||||||||||| ||||| ||| |        | |||||| |||||||||||||||||||| || |||||||||||||| |||||| ||    
T  11407 aatgaaagtgtgaggaaatttctcataagtgta-ggtttttataccaagtctccttaatgggcctaaccctccacttaatggacttaacccatttctatt 11309  T
Q  125 cacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt 223  Q
    | ||||  ||| |||||||||| |  ||||||| ||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||    
T  11308 cgcatctcaaatgtttctacactct-aacggtaattcactaataacggtcaat-aacggtaaaatatcaccaacggtcactaaacagtaaaatcttaatt 11211  T
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatga 316  Q
    ||||||||||||||||| |||||||||||||| |||||  ||| ||||||| | |||||||||||||||| ||||| ||||||||||| ||||    
T  11210 ttactctagtaacttagtaaaacaactattctcactaa-ccactaaagtaactttcaccaaaacttataa-tttactcgttctcacaaaatga 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 129; Significance: 3e-66; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 68 - 390
Target Start/End: Original strand, 10474 - 10798
Alignment:
Q  68 atcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaat 166  Q
    |||||||||| |||||||||||||| |||||| ||||||| |||||| ||||    ||| ||| |||| |||||||||| |||||||||| |||| ||||    
T  10474 atcaagtccctttaatgggcctaactctcaacttaatggatttaacccatttgaactca-atctaaaatgtttctacacacacaacggtaattcagtaat 10572  T
Q  167 aacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaat--tttactctagtaacttaggaaaacaactattcttactaattc 264  Q
    ||||||||| |||| |||||| ||||| ||| |||||||||| ||||||  |||||  |||||||||||||||||| ||||||||  |||| || || ||    
T  10573 aacggtcaactaacagtaaaatatcactaacagtcactaaacggtaaaactttaattatttactctagtaacttagtaaaacaacggttctcaccaa-tc 10671  T
Q  265 ac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacg 363  Q
    || |||||||||||| |||||||||||||| |||||||||||| |||| ||||||||||||| ||||||| |||||||||||||||| |  ||||||| |    
T  10672 actaaaagtaattcttaccaaaacttataa-tttacccgttcttacaaaatgaccaaaatactcctaagttcaaaatgactaaaatacccttctaacagg 10770  T
Q  364 gaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||| |||||||||||||||||||||||    
T  10771 gaaacccatgaaaatgcacccaatgatg 10798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 127; Significance: 4e-65; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 13 - 386
Target Start/End: Original strand, 9470 - 9844
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    |||||||||||||||||||||||||||||||||| | ||||| || |        | |||||||||||||||||||||||  | || || |||||| |||    
T  9470 aatatcttatgaaatgaaagtgtgaggaaatttcctctaaga-taaggtttttatagcaagtccccttaatgggcctaactataaagcttaatggattta 9568  T
Q  112 accaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacag 210  Q
    ||| |||||   ||| ||| |||| |||||||||| ||||||  || | |||||||||| || || ||||||||||| || || ||| |||||||||| |    
T  9569 acccatttcaactcaaatctaaaatgtttctacacacacaacaataat-cactaataacagtgaaataacggtaaaatattaccaacggtcactaaacgg 9667  T
Q  211 taaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||| ||||||| ||||||||||||||||| ||||||||  |||| |||||| ||| |||||||||||||||||||||||||||||| |||||| ||||    
T  9668 taaaaccttaattattactctagtaacttagtaaaacaacggttctcactaat-cactaaaagtaattctcaccaaaacttataattt-acccgtcctca 9765  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    ||| |||||||||||||||||||||||||||||||||||||| |  |||||| |||||| ||||| |||||||||||||    
T  9766 caaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacgcggaaacccatggaaatgcacccaat 9844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 126; Significance: 2e-64; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 25 - 390
Target Start/End: Complemental strand, 5431 - 5077
Alignment:
Q  25 aatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttctttt 124  Q
    ||||||||||||||||||||||| ||||||||| |        |||||||| ||||||||||||||||||||||  |||||||||||||| |||||| ||    
T  5431 aatgaaagtgtgaggaaatttctcataagagta-ggtttttatatcaagtctccttaatgggcctaaccctcaagttaatggacttaacccatttctatt 5333  T
Q  125 cacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt 224  Q
    || | | ||| |||||||||| |  |   ||| | |||||||||||||           ||||  |||  ||| |||||||||| |||||||||||||||    
T  5332 caaaccgaaatgtttctacacactaactagtaatccactaataacggt-----------aaaatgtcagtaacggtcactaaacggtaaaatcttaattt 5244  T
Q  225 tactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||| |||||||| |||||||| ||||| |||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  5243 tactctaataacttagtaaaacaacaattctcactaac-cactaaaagtaattctcaccaaaacttataattttacccgctctcccaaaatgaccaaaat 5145  T
Q  324 acccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||| ||||||||||||| |  ||||||||||||| ||||||||||||||| |||||||    
T  5144 acccctaagtccataatgactaaaatacccttctaacacggaaacccatgaaaatgcacctaatgatg 5077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 124; Significance: 3e-63; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 13 - 390
Target Start/End: Original strand, 61290 - 61667
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacct-aatggactta 111  Q
    ||||||||||||| ||||||||||||||||||| | |||| |||| |        ||||| |||||||||||||| |||| ||||| || ||| ||||||    
T  61290 aatatcttatgaa-tgaaagtgtgaggaaatttttcataacagta-ggtttttatatcaattccccttaatgggcataactctcaaacttaatagactta 61387  T
Q  112 accaatttcttttcacatcaaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagt 211  Q
    ||| |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||| ||| |||| ||||  ||    
T  61388 acctatttctattcaaatcaaaatgtttctacacccacaacggtatttcactaataacggtcaa-taagtgtaaaatatcaccaacggtcaataaatggt 61486  T
Q  212 aaaatcttaat--tttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    |||||| ||||  |||||||||||||||||| ||||| ||  |||| | |||  ||| |||| |||||||||||||||||||||| ||||||||| ||||    
T  61487 aaaatcctaattatttactctagtaacttagtaaaaccacggttctcattaa-gcactaaaaataattctcaccaaaacttataa-tttacccgtcctca 61584  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||  |||||||||||||| |||||||||| |  ||||||| ||||| ||||| ||||||||| |||||||    
T  61585 caaaatgaccaaaatgaccctaagtccaaaaagactaaaatacccttctaacatggaaacccatggaaatgcaccaaatgatg 61667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 89 - 390
Target Start/End: Complemental strand, 70313 - 70010
Alignment:
Q  89 taaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaa 187  Q
    ||||||||||| |||||||||||||  |||||| |||| |||| ||| ||||||||||  |||||| ||||||||||||||||||||||||||  |||||    
T  70313 taaccctcaacttaatggacttaactcatttctattcaaatcacaaatgtttctacacaaacaacgatatttcactaataacggtcaattaacaataaaa 70214  T
Q  188 catcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattctt--actaattcacaaaagtaattctcaccaa 284  Q
    |||||| ||| |||||||| | ||||||| | |||| |||||||||| |||  | ||||| | |   |||  || |||  || ||| |||||  |  | |    
T  70213 catcaccaacagtcactaaccggtaaaatatcaattattactctagtcactcggtaaaactaatggccttcaacaaat--actaaaataatttccgacga 70116  T
Q  285 aacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcaccca 384  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||    
T  70115 aacttataactttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaaccatgaaaatacaccca 70016  T
Q  385 atgatg 390  Q
    ||||||    
T  70015 atgatg 70010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 85 - 390
Target Start/End: Complemental strand, 79582 - 79275
Alignment:
Q  85 ggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaattaacggt 183  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |||| ||| ||||||| || ||||||| |||||||| ||||||||||||||||||||    
T  79582 ggcctaaccctcaacttaatggacttaacccatttctattcaaatcacaaatgtttctagacacacaacgctatttcacaaataacggtcaattaacggt 79483  T
Q  184 aaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattctt--actaattcacaaaagtaattctca 280  Q
    |||||||||| ||| |||| ||| | ||||||| | |||| |||||||||| |||  | ||||| | |   | |  || |||  || ||| |||||  |     
T  79482 aaaacatcaccaacagtcattaaccggtaaaatatcaattattactctagtcactcggtaaaactaatggccgtcaacaaat--actaaaataatttccg 79385  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgca 380  Q
     | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||    
T  79384 accaaacttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacataaaccatgaaaatgca 79285  T
Q  381 cccaatgatg 390  Q
     |||||||||    
T  79284 tccaatgatg 79275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 172522 - 172640
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca-ccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    ||||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||    
T  172522 ttactctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctcatccaaaac-tataattttactcgttctcacaaaatgaccaaa 172619  T
Q  322 atacccctaagtccaaaatga 342  Q
    |||||| |||| |||||||||    
T  172620 atacccttaagcccaaaatga 172640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 178225 - 178343
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctca-ccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    ||||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||    
T  178225 ttactctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctcatccaaaac-tataattttactcgttctcacaaaatgaccaaa 178322  T
Q  322 atacccctaagtccaaaatga 342  Q
    |||||| |||| |||||||||    
T  178323 atacccttaagcccaaaatga 178343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 70388 - 70349
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttcttataa 52  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  70388 aatatcttatgaagtgaaagtgtgaggaaatttctcataa 70349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 120; Significance: 6e-61; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 4803 - 4590
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  4803 taacggtaaaatatcactaacggtcactaaacggtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 4705  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| |||||||||||| || |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  4704 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatatccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 4606  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  4605 aatgcacccaatgatg 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 27026 - 27080
Alignment:
Q  296 ttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    |||||| ||| | ||| ||| ||||||||||||||||||||||||||||||||||    
T  27026 ttaccctttcccgcaaaatgtccaaaatacccctaagtccaaaatgactaaaata 27080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 118; Significance: 1e-59; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 122810 - 122598
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||| |||||| ||| || ||||||    
T  122810 taacggtaaaaagtcactaacggtcactaaacggtaaaatctcaattttactctagtaacttagtaaaatagctattctcactaat-cactaagagtaat 122712  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| |||||||    
T  122711 tcccactaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaa 122612  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  122611 aatgcacccaatga 122598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 163 - 388
Target Start/End: Complemental strand, 254493 - 254268
Alignment:
Q  163 taataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaat 262  Q
    |||||| ||| || ||||||| |||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||    
T  254493 taataatggttaagtaacggtcaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaat 254394  T
Q  263 tcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaaca 361  Q
     ||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||   |    
T  254393 -cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaataccattctgtaa 254296  T
Q  362 cggaaa-ccatgaaaatgcacccaatga 388  Q
     ||||| |||||||||||||||||||||    
T  254295 tggaaacccatgaaaatgcacccaatga 254268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 163 - 388
Target Start/End: Complemental strand, 261099 - 260874
Alignment:
Q  163 taataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaat 262  Q
    |||||| ||| || ||||||| |||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||| ||||||    
T  261099 taataatggttaagtaacggtcaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaataactattctcactaat 261000  T
Q  263 tcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaaca 361  Q
     ||| ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||   |    
T  260999 -cactaaaagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatacctttctttta 260902  T
Q  362 cggaaa-ccatgaaaatgcacccaatga 388  Q
     ||||| |||||||||||||||||||||    
T  260901 tggaaacccatgaaaatgcacccaatga 260874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 80 - 390
Target Start/End: Original strand, 30644 - 30944
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataacggtcaatta 178  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||||||||  ||| |||||||||| |  | ||||| || ||||||||| ||          
T  30644 taatgggcctaacccaaaacctaatggacttaacccatttctattcacatctcaaatgtttctacactctaaccggtaattaactaataacagt------ 30737  T
Q  179 acggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattc 277  Q
         ||||  |||| ||| |||||||||| ||||||||| |||||||||||||||| |||| |||| |||||||||  ||||| ||| |||||||||||    
T  30738 -----aaaatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaatttagtaaaataactattctctctaat-cactaaaagtaattc 30831  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
     |||||||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| |  ||||||||||||| |||||||||    
T  30832 ccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaacacggaaacccatgaaaa 30930  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  30931 tgcacccaatgatg 30944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 107; Significance: 4e-53; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 71 - 327
Target Start/End: Original strand, 15400 - 15655
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatca-aaaggtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||  |||||| ||||||||  ||| || ||||||| |  | ||||| ||||||||||||    
T  15400 aagtctccttattgggcctaaccctccacttaatggacttaactcatttctattcacatctcaaatgtctctacactctaaccggtaattcactaataac 15499  T
Q  170 ggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aa 268  Q
    |||| | |||||||||||  |||| ||| |||||||||| ||||||||||| |||||||||||||||||| | ||| ||||||||| ||| |||||| ||    
T  15500 ggtctagtaacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaactta-gtaaataactattctcact-attcactaa 15597  T
Q  269 aagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  15598 aagtaattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaataccc 15655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 107; Significance: 4e-53; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 174 - 390
Target Start/End: Original strand, 48767 - 48983
Alignment:
Q  174 aattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagt 272  Q
    ||||||||||||||  |||  |||  ||||||||| ||||||||||| ||||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||    
T  48767 aattaacggtaaaatgtcagcaacgttcactaaacggtaaaatcttagttttactttagtaacttagtaaaataactattctcactaat-cactaaaagt 48865  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |  || ||||| |||| ||||    
T  48866 aattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaaatccaaaatgactaaaatacccttcaaacacagaaacccat 48964  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||    
T  48965 gaaaatgcacccaatgatg 48983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 174 - 390
Target Start/End: Original strand, 62215 - 62431
Alignment:
Q  174 aattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagt 272  Q
    ||||||||||||||  |||  |||  ||||||||| ||||||||||| ||||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||    
T  62215 aattaacggtaaaatgtcagcaacgttcactaaacggtaaaatcttagttttactttagtaacttagtaaaataactattctcactaat-cactaaaagt 62313  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |  || ||||| |||| ||||    
T  62314 aattcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaaatccaaaatgactaaaatacccttcaaacacagaaacccat 62412  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||    
T  62413 gaaaatgcacccaatgatg 62431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 48681 - 48736
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttca 126  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||||| ||||    
T  48681 aagtctccttattgggcctaaccctccacttaatggacttaacccatttctattca 48736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 62129 - 62184
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttca 126  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||||| ||||    
T  62129 aagtctccttattgggcctaaccctccacttaatggacttaacccatttctattca 62184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 198 - 390
Target Start/End: Complemental strand, 50811 - 50621
Alignment:
Q  198 tgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattt 296  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||| |||||||| |||||||||    
T  50811 tgtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattcccaccaaaaattataattt 50714  T
Q  297 tacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  |||||||||| |||||||||||||||||||||||||    
T  50713 tacccgttctcacaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacgg-aaccatgaaaatgcacccaatgatg 50621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 71 - 388
Target Start/End: Original strand, 85872 - 86192
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataa 168  Q
    |||||||||||||||||||||| ||||| || |||||| |||||  |||||   ||  ||| |||| |||||||||| |||||||||| |||||||||||    
T  85872 aagtccccttaatgggcctaactctcaaacttaatggatttaactcatttcaactccaatctaaaatgtttctacacacacaacggtaattcactaataa 85971  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattcttactaattcaca 267  Q
    |||| |||||||| ||||| ||||| ||| |||||||||| |||||||  ||||   ||||||| |||||||| |||| | |  || | |||||||   |    
T  85972 cggttaattaacgataaaatatcaccaacagtcactaaacggtaaaatactaatcactactctaataacttagtaaaatagcggttttcactaattacta 86071  T
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa 367  Q
    ||||||||||||||||||||||||| ||| |||| ||||||| | |||||||||||| ||||||||| |||||||||||| || |  |||||||||||||    
T  86072 aaagtaattctcaccaaaacttatagttt-acccattctcacgaaatgaccaaaatatccctaagtctaaaatgactaaattacccttctaacacggaaa 86170  T
Q  368 -ccatgaaaatgcacccaatga 388  Q
     |||||||||||||||||||||    
T  86171 cccatgaaaatgcacccaatga 86192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 73 - 390
Target Start/End: Original strand, 159843 - 160161
Alignment:
Q  73 gtccccttaatgggcctaaccctcaacct-aatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataacg 170  Q
    ||||||||||||||||||||||| || || |||||| |||||| ||| |   ||| ||  |||| ||||||||||  |||||||||  |||| |||||||    
T  159843 gtccccttaatgggcctaaccctaaagcttaatggatttaacccattccaactcaaatttaaaatgtttctacac--acaacggtaaatcaccaataacg 159940  T
Q  171 gtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaacaactattcttactaattcacaaa 269  Q
    ||||| |||||||||||||  || ||| |||||| | | ||||||| |||||| ||||||||||||||||| |||| |||  |||  ||||| |   |||    
T  159941 gtcaactaacggtaaaacactaccaacggtcacttatcggtaaaatattaattattactctagtaacttagcaaaataacggttcccactaaatactaaa 160040  T
Q  270 agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-c 368  Q
    | |||| |||||||||| ||||||| | | | |||||||||| | |||||||||||||| |||||||||||||||||| || |  ||||||||| ||| |    
T  160041 aataatcctcaccaaaatttataatctaatc-gttctcacaaaaagaccaaaatacccccaagtccaaaatgactaaattacccttctaacacgaaaacc 160139  T
Q  369 catgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||    
T  160140 catgaaaatgcacccaacgatg 160161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 6020 - 5807
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| | ||||||| || |||||||||||||||||| |||| ||||||||| |||||| ||| |||||||||    
T  6020 taacggtaaaatgtcactaacagtcactaaactgaaaaatctcaactttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaat 5922  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |  |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |  || |||||||||| ||| |||    
T  5921 ttccaccaaaa-ttataattttacccgttctcacgaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttccaacacggaaacccaggaa 5823  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  5822 aatgcacccaatgatg 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 6105 - 6039
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaaggtttctacaccc 147  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||||||||  ||  |||||||||||    
T  6105 taatgggcctaacccaaaacctaatggacttaacc-atttctattcacatctcaaaatttctacaccc 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 193116 - 192903
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  193116 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 193019  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || | |||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  193018 tcccgccaaaaattataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 192919  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  192918 aatgcacccaatgatg 192903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 103; Significance: 9e-51; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 177 - 386
Target Start/End: Complemental strand, 36563 - 36357
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||| ||||| ||||||||||||||| |||| ||||||||| |||||  ||| |||||||||    
T  36563 taacggtaaaatatcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttagtaaaataactattctcactaaa-cactaaaagtaat 36466  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaa 375  Q
    || |||||||| ||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |  ||||||||| || ||||||||    
T  36465 tcccaccaaaa-ttataattttacccgctctcacaaaa-gaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacgaaacccatgaaa 36368  T
Q  376 atgcacccaat 386  Q
    |||||||||||    
T  36367 atgcacccaat 36357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 15083 - 14949
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||     
T  15083 taacggtaaaatgtcactaacggtcactaaacggtaaaatcttagttttactctagtaacttagtaaaacaactattcttactaa-ccactaaaagtaac 14985  T
Q  276 tctcaccaaaacttataattttacccgttctcacaa 311  Q
    ||||||||||||||||||||||||||||||||||||    
T  14984 tctcaccaaaacttataattttacccgttctcacaa 14949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 211 - 390
Target Start/End: Original strand, 576 - 756
Alignment:
Q  211 taaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||||||  ||||||||||||||||||| |||| ||||||||| |||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  576 taaaatcttggttttactctagtaacttagtaaaataactattctcactaat-cactaaaagtaattcccaccaaaaattataattttacccgttctcac 674  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    || ||||||||||||||||||| || ||||||||||||||| |  ||||||||||||| ||||| |||||||||||||||||    
T  675 aaaatgaccaaaatacccctaaatctaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatgatg 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 71 - 389
Target Start/End: Complemental strand, 4957 - 4646
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag--gtttctacacccacaacggtatttcactaataa 168  Q
    ||||| ||||| | |||||||||||| || |||||||||||||| |||||| |||| | |||||   |||||||||| |  |    || |||||||||||    
T  4957 aagtctccttattaggcctaaccctccacttaatggacttaacccatttctattcaaaccaaaaaatgtttctacactctaactaataattcactaataa 4858  T
Q  169 cggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-a 267  Q
    ||||||| ||||||||||| |||||          ||||| ||||||||||| ||||||||||||||||||| ||||||||  |||| |||||| ||| |    
T  4857 cggtcaagtaacggtaaaatatcac----------taaacggtaaaatcttagttttactctagtaacttagtaaaacaacggttctcactaat-cacta 4769  T
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacac-tctaacacggaa 366  Q
    ||| |||||| |||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||| || |||||||||    
T  4768 aaaataattcccaccaaaaattataattttacccattctcacaaaatgatcaaaatacccctaagtccaaaatgactaaaat-acacttcaaacacggaa 4670  T
Q  367 a-ccatgaaaatgcacccaatgat 389  Q
    | |||||||||||||||| |||||    
T  4669 acccatgaaaatgcacccgatgat 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 278 - 390
Target Start/End: Complemental strand, 8407 - 8296
Alignment:
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa-accatgaaaa 376  Q
    ||||||||| ||||||||| |||| |||||| || |||||| ||||||||||||||||||||||| |||| || |  ||||||||| ||  ||||| |||    
T  8407 tcaccaaaatttataattt-acccattctcaaaaaatgaccgaaatacccctaagtccaaaatgattaaattacccttctaacacgaaatcccatg-aaa 8310  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  8309 tgcacccaatgatg 8296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 176 - 392
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaat---cttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagt 272  Q
    |||||||||||  |||| ||| |||||| ||| |||||||   || ||||||||||||||||||||| |||| ||||||||| |||||| ||| ||||||    
T  176 taacggtaaaatgtcactaacggtcacttaacggtaaaattatctcaattttactctagtaacttagtaaaataactattctcactaat-cactaaaagt 274  T
Q  273 aattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccat 371  Q
    ||||| |||||||| | |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |  ||||||||||||| ||||    
T  275 aattcccaccaaaa-taataattttacccgttctcacaaaatgaccaaaatacctctaagtctaaaatgactaaaatacccttctaacacggaaacccat 373  T
Q  372 gaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||    
T  374 gaaaatgcacccaatgatg 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 89 - 155
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaa-ccaatttcttttcacatcaaaaggtttctacac 145  Q
    |||||||||||||||  |||||||||||||||| ||| ||||| |||| | ||||| ||||||||||    
T  89 taatgggcctaacccaaaacctaatggacttaacccattttctattcaaaccaaaatgtttctacac 155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 19568 - 19355
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| || |||||||||||||||||| |||| ||||||||| ||||| |||| || ||||||    
T  19568 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaactttactctagtaacttagtaaaataactattctcactaa-tcactaagagtaat 19470  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||| | |||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||| |  ||||||||||||| |||||||    
T  19469 tcccaccaagatttataattttacccgttctcaccaaatgaccaaaatacccctatgtcc-aaatgactaaaatacccttctaacacggaaacccatgaa 19371  T
Q  375 aatgcacccaatgatg 390  Q
    |||| |||||||||||    
T  19370 aatgtacccaatgatg 19355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 23785 - 23725
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||    
T  23785 aaaagtaattctcacccaaaattataattttacccgttctcacaaaattaccaaaataccc 23725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 20806 - 21019
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||  ||||||||| || |||||||||| ||||||| |||| ||||||||| |||||| ||| |||||||||    
T  20806 taacggtaaaatgtcactaacggtcactaaatggtaaaatctcaactttactctagcaacttagtaaaataactattctcactaat-cactaaaagtaat 20904  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||| | |||||||||||||||||| |||| |||||||||||||| |  ||||||||||||| |||||||    
T  20905 tcccaccaaaatttataattttacccgttctcaccaaatgaccaaaatacccctatgtcc-aaatgactaaaatacccttctaacacggaaacccatgaa 21003  T
Q  375 aatgcacccaatgatg 390  Q
    |||||| |||||||||    
T  21004 aatgcatccaatgatg 21019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 87367 - 87268
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  87367 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 87269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 266 - 390
Target Start/End: Complemental strand, 4632 - 4508
Alignment:
Q  266 caaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacgga 365  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||| |||||    
T  4632 caaaagtaattctcaccaaaaattataattttacccgttctcacaaaatgaccaaaatacccctaagtccaaaatgactaaaatactcttctaatacgga 4533  T
Q  366 aaccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||||||||||||||    
T  4532 aaccatgaaaatgcacccaatgatg 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 388
Target Start/End: Complemental strand, 30896 - 30686
Alignment:
Q  178 aacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaatt 276  Q
    ||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||    
T  30896 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaatt 30799  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    | |||||||| |||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||| |  |||| |||||||| ||||||||    
T  30798 cccaccaaaaattataattttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaaa 30699  T
Q  376 atgcacccaatga 388  Q
    |||||||||||||    
T  30698 atgcacccaatga 30686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 97; Significance: 3e-47; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 34302 - 34516
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaa 274  Q
    ||||||||||| ||||| ||| |||||||||| |||||||  |||||  || ||||||||||||| |||| |||  |||| |||||| ||| ||||||||    
T  34302 taacggtaaaatatcaccaacggtcactaaacggtaaaatactaattactaatctagtaacttagtaaaataacggttctcactaat-cactaaaagtaa 34400  T
Q  275 ttctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc-atga 373  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |  |||||||| |||||| ||||    
T  34401 ttctcaccaaaacttattattt-acccgttctcacaaaatgaccaaaatacccccaagtccaaaatgactaaaatacccttctaacacagaaacctatga 34499  T
Q  374 aaatgcacccaatgatg 390  Q
    |||||||||||||||||    
T  34500 aaatgcacccaatgatg 34516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 34147 - 34180
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  34147 aatatcttatgaaatgaaagtgtgaggaaatttc 34180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 97; Significance: 3e-47; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 178 - 388
Target Start/End: Original strand, 41948 - 42158
Alignment:
Q  178 aacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaatt 276  Q
    ||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||    
T  41948 aacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaatt 42045  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    | |||||||| |||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||| |  |||| |||||||| ||||||||    
T  42046 cccaccaaaaattataattttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaaa 42145  T
Q  376 atgcacccaatga 388  Q
    |||||||||||||    
T  42146 atgcacccaatga 42158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 177 - 388
Target Start/End: Complemental strand, 36719 - 36511
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    ||||||||||| ||||| |||  |||||||  | |||||||| | ||||||||||||||||||| |||| | ||||||| |||||||   |||| |||||    
T  36719 taacggtaaaatatcactaacgatcactaacga-taaaatctaagttttactctagtaacttagtaaaata-ctattctcactaattattaaaa-taatt 36623  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaa 375  Q
    |||||||||| |||  ||||||||| | | | | | |||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||    
T  36622 ctcaccaaaa-ttaccattttacccttacccgccaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaa 36524  T
Q  376 atgcacccaatga 388  Q
    |||||||||||||    
T  36523 atgcacccaatga 36511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 36806 - 36743
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatt-tcttttcacatcaaaaggtttcta 142  Q
    |||||||||||||||  ||||||||||||||||||  || ||| |||||||||||| |||||||    
T  36806 taatgggcctaacccaaaacctaatggacttaacccgttctctattcacatcaaaatgtttcta 36743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 15636 - 15424
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||| ||| |||||| ||| |||||||||    
T  15636 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactactctcactaat-cactaaaagtaat 15539  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || ||| |||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |  ||||||||||||| |||||||    
T  15538 tcccactaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccgtaagtccaaaatgactaaaatacccttctaacacggaaacccatgaa 15440  T
Q  375 aatgcacccaatgatg 390  Q
    |||||| |||||||||    
T  15439 aatgcatccaatgatg 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 95; Significance: 5e-46; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 175 - 388
Target Start/End: Complemental strand, 247090 - 246879
Alignment:
Q  175 attaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaa 274  Q
    |||||||||||||  |||| ||| ||||||||||  |||||||  ||||| ||||||||||||||| |||| |||||| || |||||| ||| ||| |||    
T  247090 attaacggtaaaatgtcactaacggtcactaaacgataaaatcccaattt-actctagtaacttagtaaaataactatcctcactaat-cactaaaataa 246993  T
Q  275 ttctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatga 373  Q
    ||| |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||| |  ||||||||||||| ||||||    
T  246992 ttcccaccaaaa-ttataattttacccgtcctcacaaaatgaccaaaatacccctaagtataaaatgactaaaatacccttctaacacggaaacccatga 246894  T
Q  374 aaatgcacccaatga 388  Q
    |||||||||||||||    
T  246893 aaatgcacccaatga 246879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 33771 - 33686
Alignment:
Q  223 tttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    |||||||||||||||||   ||| ||||||| |||||| | ||| |||||||||| ||| |||| ||||||||||||||| ||||||    
T  33771 tttactctagtaacttaatgaaataactatttttactagt-cactaaagtaattcccactaaaaattataattttacccgctctcac 33686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 181 - 389
Target Start/End: Original strand, 414 - 621
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctca 280  Q
    |||||||  |||| ||| |||| ||||| | ||||||| || |||||| ||||||||||| |||| ||||||||| ||||||    ||||||||||| ||    
T  414 ggtaaaatgtcactaacggtcagtaaactgaaaaatctcaactttact-tagtaacttagtaaaataactattctcactaatcattaaaagtaattccca 512  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |  || |||||||||| ||||||||||||    
T  513 ccaaaa-ttataattttacccgttctcacaaaatgaccaaaataaccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgc 611  T
Q  380 acccaatgat 389  Q
    ||||||||||    
T  612 acccaatgat 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 324 - 374
Alignment:
Q  80 taatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc 130  Q
    ||||||| |||||||  |||||||||||||||||| |||||| ||||||||    
T  324 taatgggactaacccaaaacctaatggacttaacccatttctattcacatc 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 199 - 390
Target Start/End: Complemental strand, 12113 - 11922
Alignment:
Q  199 gtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataatttt 297  Q
    |||||||||| ||||||||| ||||| |||||||| |||||   ||| ||||||||| |||||| ||| |||||||||||||||| ||| ||||||||||    
T  12113 gtcactaaacggtaaaatctcaattt-actctagttacttaatgaaataactattctcactaat-cactaaaagtaattctcacccaaaattataatttt 12016  T
Q  298 acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||| |||||| |  ||||||||||||| |||||||||||||||||||||||    
T  12015 acccgttctcacaaaatgaccaaaatatccctaagtctaaaatgaccaaaatatccttctaacacggaaacccatgaaaatgcacccaatgatg 11922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 92; Significance: 3e-44; HSPs: 5)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 26062 - 25849
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||||||| ||||||||||| |||| || |||||  |||||| ||| ||||||| |    
T  26062 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattttactatagtaacttagtaaaataaatattcacactaat-cactaaaagtact 25964  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| ||||||| |||||||||||||||| ||| |||||||| ||||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  25963 tcccaccaaaa-ttataatattacccgttctcacaaaatggccaaaatatccctaagtctaaaatgactaaaatacccttctaacacggaaatccatgaa 25865  T
Q  375 aatgcacccaatgatg 390  Q
    |||||||| |||||||    
T  25864 aatgcaccaaatgatg 25849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 12389 - 12567
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||| ||| ||||||||||   ||| ||||||||| |||||| ||| ||||||||||| |||||||| |||  ||||||||||||||||    
T  12389 gtaaaatctcaattt-actatagtaacttaatgaaataactattctcactaat-cactaaaagtaattc-caccaaaa-ttaccattttacccgttctca 12484  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||||||||||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||    
T  12485 caaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 12567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 7812 - 7663
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaat 275  Q
    ||||||| |||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| || ||||||    
T  7812 taacggtgaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaagagtaat 7715  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||| ||| ||||||||| |||||||||||||| |||||||||||||||    
T  7714 tctcacccaaaattataatttaacccgttctcacaaaatgaccaaaataccc 7663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 6537 - 6460
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||||| ||| ||||||||||||| || |  ||||||||| ||| |||| |||||||||||||||||    
T  6537 atgaccaaaatacccctgagttcaaaatgactaaattaccgttctaacacgaaaacccattaaaatgcacccaatgat 6460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 390
Target Start/End: Complemental strand, 7681 - 7625
Alignment:
Q  335 caaaatgactaaaataacactctaacacggaaacc-atgaaaatgcacccaatgatg 390  Q
    ||||||||| |||||| |  ||||||||||||||| |||||||||||||||||||||    
T  7681 caaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 7625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 17026 - 16815
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||  ||| |||||||||| || |||||| ||||| ||||||||||||||   ||| ||||||||| || ||| ||| |||||||||    
T  17026 taacggtaaaatgtcattaacggtcactaaacggtgaaatctcaattt-actctagtaacttaatgaaataactattctcaccaat-cactaaaagtaat 16929  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaa 375  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  | |||||||||| ||||||||    
T  16928 tcccaccaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttataacacggaacccatgaaa 16830  T
Q  376 atgcacccaatgatg 390  Q
    |||||||||||||||    
T  16829 atgcacccaatgatg 16815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 91; Significance: 1e-43; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 84 - 390
Target Start/End: Original strand, 71167 - 71475
Alignment:
Q  84 gggcctaaccctcaacctaatggacttaaccaatttcttttcacatcaaaag-gtttctacacccacaacggtatttcactaataacggtcaattaacgg 182  Q
    |||||||||||||||| |||||||| ||||| |||||| |||| |||||||  |||||||||| |||||||||| |||||||||||||||||||||||||    
T  71167 gggcctaaccctcaacttaatggacgtaacccatttctattcaaatcaaaaatgtttctacacacacaacggtaattcactaataacggtcaattaacgg 71266  T
Q  183 taaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactctagtaacttaggaaaac-aactattcttactaattcacaaaagtaattctca 280  Q
    ||||| ||||| ||| |||||||||| |||||||  ||||| ||||||||||||||  | || || ||    ||| || || |   |||| |||||||||    
T  71267 taaaatatcaccaacggtcactaaacggtaaaatactaattattactctagtaactcggtaagactaatgcctctcaccaaatactaaaaataattctca 71366  T
Q  281 ccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgc 379  Q
    ||  ||||| ||| |||||||||||| |||| |||||||||||||||||||||| ||||| |||||| || |  ||||||||  ||| || |||||||||    
T  71367 cc-taacttttaa-tttacccgttcttacaaaatgaccaaaatacccctaagtctaaaattactaaattacccttctaacacaaaaatccttgaaaatgc 71464  T
Q  380 acccaatgatg 390  Q
     ||||||||||    
T  71465 gcccaatgatg 71475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 347
Target Start/End: Original strand, 31648 - 31865
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactc 229  Q
    |||| |||||||||| ||||||||||   ||||||| | || || | ||||||||||    || ||| |||||| ||||||||| | || ||| ||||||    
T  31648 aaaatgtttctacacacacaacggtaaaccactaattaaggccactaaacggtaaaattctaccaacggtcactcaacagtaaactattgattattactc 31747  T
Q  230 tagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaata-tgaccaaaatacccc 328  Q
    ||||||||||| |||| |||  |||  || || | |  ||| ||||||||||||||| | ||||||| |||||||||||||| | ||||||||||| |||    
T  31748 tagtaacttagcaaaataacggttcccacaaaataattaaaataattctcaccaaaattgataattt-acccgttctcacaaaaatgaccaaaatatccc 31846  T
Q  329 taagtccaaaatgactaaa 347  Q
    |||||||||||| ||||||    
T  31847 taagtccaaaattactaaa 31865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 31529 - 31562
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||| |||||||||||||||||||||||||    
T  31529 aatatcttgtgaaatgaaagtgtgaggaaatttc 31562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 179 - 390
Target Start/End: Complemental strand, 5493 - 5282
Alignment:
Q  179 acggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattc 277  Q
    ||||||||| ||||| ||| |||||||||| ||||||||| ||||| ||||||||| ||||   ||| ||||||||| |||||  ||| |||| ||||||    
T  5493 acggtaaaatatcaccaacggtcactaaacggtaaaatctcaattt-actctagtagcttaatgaaataactattctcactaaa-cactaaaattaattc 5396  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
    ||||| |||  ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||| |  ||||||||||||| |||||||||    
T  5395 tcacccaaaactataattttacccgttctcacaaaatgaccaaaatacccttaagtctaaaatgactgaaatacccttctaacacggaaacccatgaaaa 5296  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  5295 tgcacccaatgatg 5282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 90; Significance: 5e-43; HSPs: 3)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 8997 - 9176
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcac 309  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||| || ||||||||||||| ||||| |||| ||||||||||||| |||     
T  8997 gtaaaatctcaattttactctagtaacttagtaaaataactattctcactaat-cataaaagtaattctcgccaaa-cttacaattttacccgttttcat 9094  T
Q  310 aatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
     | |||||  ||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||| ||||||||||||    
T  9095 taaatgactgaaatacccctaagtccaaaatgactaaaataccattctaacatggaaacccatgaaaatacacccaatgatg 9176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 10611 - 10715
Alignment:
Q  287 cttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    |||| ||||||||||||| ||| || ||||   |||||||| |||||||||||||||||||||| || ||||||||||||| |||||||||| || ||||    
T  10611 cttacaattttacccgttttcataaaatgattgaaatacccataagtccaaaatgactaaaatatcattctaacacggaaatccatgaaaatacatccaa 10710  T
Q  386 tgatg 390  Q
    |||||    
T  10711 tgatg 10715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 8885 - 9002
Alignment:
Q  71 aagtccccttaatgggcctaaccctcaacctaatggacttaaccaatttcttttcacatc-aaaaggtttctacacccacaacggtatttcactaataac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||| |||||| |||| | | |||| |||||||||| |  | ||||| || |||||||||    
T  8885 aagtctccttattgggcctaaccctccacttaatggacttaacccatttctattcaaaccaaaaatgtttctacactctaaccggtaattaactaataac 8984  T
Q  170 ggtcaattaacggtaaaa 187  Q
    |||||| ||| |||||||    
T  8985 ggtcaagtaaaggtaaaa 9002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 223 - 390
Target Start/End: Original strand, 25884 - 26052
Alignment:
Q  223 tttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    |||||||||||||||||   ||| ||||||||| |||||| ||| |||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  25884 tttactctagtaacttaatgaaataactattctcactaat-cactaaaagtaattctcacccaaaattagaattttacccgttctcacaaaatgaccaaa 25982  T
Q  322 atacccctaagtccaaaatgactaaaataacactctaacacggaaac-catgaaaatgcacccaatgatg 390  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||| |||| ||| |||||||||||||    
T  25983 atacccctatgtccaaaatgactaaaatacccctctaacacggaaactcatggaaaggcacccaatgatg 26052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 90; Significance: 5e-43; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 42987 - 43196
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| |||| |||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  42987 taacggtaaaatgtcactaacagtcactaaacggtaaaatctcaattt-actcaagtaacttaatgaaataactattctcactaat-cactaaaagtaat 43084  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| |  |||| |||||||| |||||||    
T  43085 tcccaccaaaa-ttataattttacccgttctcacaa-atgaccaaaatacccttaagtctaaaatgactaaaatacccttctagcacggaaacccatgaa 43182  T
Q  375 aatgcacccaatga 388  Q
    ||||||||||||||    
T  43183 aatgcacccaatga 43196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 322
Target Start/End: Original strand, 14131 - 14273
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||| ||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| ||||| |||| |||||||||    
T  14131 taacagtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaa-tcactaaaagtaat 14228  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaa 322  Q
     | |||||||| |||||| || || ||||||||||| ||||||||||    
T  14229 ccccaccaaaa-ttataa-ttaactcgttctcacaaaatgaccaaaa 14273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 5341 - 5555
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| |||||||||    
T  5341 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaat 5438  T
Q  276 tctcaccaaaac-ttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatga 373  Q
    || ||| ||||  |||||| |||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||||||    
T  5439 tcccacaaaaaaattataactttacccgctctcacaaaatgaccaaaatacccttaagtctaaaatgactaaaatacccttctaacacggaaacccatga 5538  T
Q  374 aaatgcacccaatgatg 390  Q
    |||||||||||||||||    
T  5539 aaatgcacccaatgatg 5555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 15507 - 15590
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaa 261  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| || |||||||||||||||||   ||| ||||||||| |||||    
T  15507 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaa-tttactctagtaacttaatgaaataactattctcactaa 15590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 386
Target Start/End: Original strand, 9496 - 9704
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  9496 taacggtaaaatgtcaccaacagtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 9593  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    || |||||||| |||||||||||||| ||||||||| |||||| ||||||| ||||||| ||||||||||||||| |  ||||||||||||| |||||||    
T  9594 tcccaccaaaa-ttataattttacccattctcacaaaatgacctaaataccactaagtctaaaatgactaaaatacccttctaacacggaaacccatgaa 9692  T
Q  375 aatgcacccaat 386  Q
    ||||||||||||    
T  9693 aatgcacccaat 9704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 88; Significance: 8e-42; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 107433 - 107220
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaat 275  Q
    ||||| |||||| |||| ||| || ||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| || ||||||    
T  107433 taacgataaaacgtcactaacagttactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaagagtaat 107336  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||| |||||  ||||||||||||||| |  ||||||||||||| |||||||    
T  107335 tctcacccaaaattataatttaacccgttctcacaaaatgaccaaaatacccttaagtttaaaatgactaaaatacccttctaacacggaaacccatgaa 107236  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  107235 aatgcacccaatgatg 107220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 223 - 386
Target Start/End: Complemental strand, 89076 - 88912
Alignment:
Q  223 tttactctagtaacttaggaaaacaactattcttactaattcacaaa-agtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    |||||||||||||||||   ||| ||||||||| |||||  ||| || ||||||||||||| ||| ||||||||| |||||||||||||| |||||||||    
T  89076 tttactctagtaacttaatgaaataactattctcactaaa-cactaagagtaattctcacccaaaattataatttaacccgttctcacaaaatgaccaaa 88978  T
Q  322 atacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaat 386  Q
    |||||| |||||  ||||||||||||||| |  ||||||||||||| |||| ||||||||||||||    
T  88977 atacccttaagtttaaaatgactaaaatacccttctaacacggaaacccataaaaatgcacccaat 88912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 80324 - 80401
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||| | ||||||||||||||||| || |  ||||||||| ||| |||| |||||||||| ||||||    
T  80324 atgaccaaaatacccttgagtccaaaatgactaaattatccttctaacacgaaaacccattaaaatgcaccgaatgat 80401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 210 - 390
Target Start/End: Original strand, 56245 - 56425
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||| ||| ||||||||||| |||||||| |||||||||||||| ||||||    
T  56245 gtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaat-cactaaaagtaattcccaccaaaaattataattttacccattctca 56342  T
Q  309 caatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||| |||||||||||| ||||||||||||||||||||||||| |  | ||||||||||| |||| ||||||||||||||||||    
T  56343 caaaatgaccaaaatatccctaagtccaaaatgactaaaatacctttataacacggaaacccataaaaatgcacccaatgatg 56425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 9657 - 9445
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaatt 276  Q
    ||||||||||| | ||| ||| |||||||||| ||||||||| ||||| |||| |||||||||   ||| ||||||||| ||||||    ||||||||||    
T  9657 taacggtaaaataccactaacggtcactaaacggtaaaatctcaattt-actcaagtaacttaatgaaataactattctaactaatcattaaaagtaatt 9559  T
Q  277 ctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaa 376  Q
    |||||| ||| |||| ||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||| |  ||||||||||||  ||||||||    
T  9558 ctcacccaaaattatcattttacccgttctcatcaaatgaccaaaatacccttaagtctaaaatgattaaaatacccttctaacacggaactcatgaaaa 9459  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  9458 tgcacccaatgatg 9445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 181 - 390
Target Start/End: Complemental strand, 596 - 388
Alignment:
Q  181 ggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctc 279  Q
    ||||||| ||||| ||| |||||||||| ||||||||| ||||| |||||||| | |||   ||| ||||||||| |||||| ||| ||||||||||| |    
T  596 ggtaaaatatcactaacggtcactaaacggtaaaatctcaattt-actctagttatttaatgaaataactattctcactaat-cactaaaagtaattccc 499  T
Q  280 accaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatg 378  Q
    ||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |  ||  ||||||||| ||||||||||     
T  498 accaaaaat-ataattttacccgttctcacaaaatgaacaaaatacccctaagtccaaaatgactaaaatacccttcccacacggaaacccatgaaaata 400  T
Q  379 cacccaatgatg 390  Q
    ||||||||||||    
T  399 cacccaatgatg 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 390
Target Start/End: Original strand, 6633 - 6846
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| | |||||||||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| || ||| ||| |||||||||    
T  6633 taacggtaaaatgtcactacctgtcactaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcacgaat-cactaaaagtaat 6730  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||||||    || || ||||||||||||||| |  ||||||||||||| |||||||    
T  6731 tctcccccaaaattataattttacccgttctcacaaaatgaccaaaatacaaaaaaatcaaaaatgactaaaatacccttctaacacggaaacccatgaa 6830  T
Q  375 aatgcacccaatgatg 390  Q
    ||||||||||||||||    
T  6831 aatgcacccaatgatg 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 177 - 386
Target Start/End: Complemental strand, 3228 - 3020
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||| ||||| ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  3228 taacggtaaaatgtcactaacggtcattaaacggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 3131  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaa 374  Q
    ||||||| |||  ||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |  ||||| ||||||| |||||||    
T  3130 tctcacccaaaactataattttacccgttctcacaaaa-gaccaaaatacccttaagtccaaaatgactaaaatacccttctaatacggaaacccatgaa 3032  T
Q  375 aatgcacccaat 386  Q
    ||||||||||||    
T  3031 aatgcacccaat 3020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 177 - 388
Target Start/End: Original strand, 1733 - 1945
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    ||||| |||||  |||| ||| |||||||| | ||||||||| ||||| ||||||||||||||   ||| ||||||||| |||||  ||| |||||||||    
T  1733 taacgataaaatgtcactaacggtcactaatcggtaaaatctcaattt-actctagtaacttaatgaaataactattctcactaaa-cactaaaagtaat 1830  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtcc-aaaatgactaaaataacactctaacacggaaa-ccatga 373  Q
    ||||||| |||   |||||||||||||| ||||| | ||||||||||||||| ||||||| |||| |||||||||| |  |||| |||||||| |||| |    
T  1831 tctcacccaaaacaataattttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaaaagactaaaatacccttctagcacggaaacccatta 1930  T
Q  374 aaatgcacccaatga 388  Q
    | |||||||||||||    
T  1931 agatgcacccaatga 1945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 179 - 390
Target Start/End: Original strand, 12733 - 12943
Alignment:
Q  179 acggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattc 277  Q
    |||||||||  |||| ||| || ||||||| ||||||||| ||||| |||| |||||||||   ||| ||||||||| |||||| ||| |||||||||||    
T  12733 acggtaaaatgtcactaacggttactaaacggtaaaatctcaattt-actccagtaacttaatgaaataactattctcactaat-cactaaaagtaattc 12830  T
Q  278 tcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaa 376  Q
     | | |||| ||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||||||| |  ||||||||||||| |||||||||    
T  12831 ccgctaaaa-ttataattttacctgttctcacaaaatgaccaaaataaccctgagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaa 12929  T
Q  377 tgcacccaatgatg 390  Q
    ||||||||||||||    
T  12930 tgcacccaatgatg 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 268 - 390
Target Start/End: Original strand, 92398 - 92519
Alignment:
Q  268 aaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa 367  Q
    ||||||||||||| |||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  92398 aaagtaattctcatcaaa-cttataattt-acccattctcacaaaatgaccaaaatacccctaagtccaaaataactaaaataccattctaacacggaaa 92495  T
Q  368 -ccatgaaaatgcacccaatgatg 390  Q
     |||||||||||||||||||||||    
T  92496 cccatgaaaatgcacccaatgatg 92519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 131 - 343
Target Start/End: Original strand, 2517 - 2729
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| |||||||| |  | |||||||||| |||| |||||||||||    |  ||| |||||| ||| ||||||| ||||||| || ||    
T  2517 aaaatgtttctacacacacaacggcaaatgactaataacgatcaaataacggtaaaattctagcaacggtcacttaacggtaaaatattaatttctaatc 2616  T
Q  230 tagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccct 329  Q
    ||||||||||| ||||| ||  |||| ||||| |   |||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||    
T  2617 tagtaacttagtaaaacgacggttctcactaaatactaaaaataattctcaccaaaacttataattt-acccgttctcacaaaatgaccacaatacccct 2715  T
Q  330 aagtccaaaatgac 343  Q
    ||||||||||||||    
T  2716 aagtccaaaatgac 2729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 2398 - 2431
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  2398 aatatcttatgaaatgaaagtgtgaggaaatttc 2431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 274 - 390
Target Start/End: Complemental strand, 5663 - 5547
Alignment:
Q  274 attctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatg 372  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |  ||||| ||||||| |||||    
T  5663 attctcactaaaa-ttataattttacccgttctcacaaaatgaccaaaatacccctaagtcgaaaatgactaaaatacccttctaagacggaaacccatg 5565  T
Q  373 aaaatgcacccaatgatg 390  Q
    ||||||||||||||||||    
T  5564 aaaatgcacccaatgatg 5547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 267 - 390
Target Start/End: Original strand, 725 - 846
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  725 aaaaataattctcaccaa--cttataattttacccgttctcgcaaaatgaccaaaatacccctaagtccaaaatgactaaaatacccttctaacacggaa 822  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | ||||| |||||||||||||||||    
T  823 acccatg-aaatgcacccaatgatg 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 73; Significance: 7e-33; HSPs: 2)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 267 - 390
Target Start/End: Original strand, 2088 - 2211
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |  ||||||||||||    
T  2088 aaaagtaattcccaccaaaa-ttataattttagccgttctcacaaaatgaccaaaatacccctaagtccgaaatgactaaaatacccttctaacacggaa 2186  T
Q  367 a-ccatgaaaatgcacccaatgatg 390  Q
    | ||||| |||||||| ||||||||    
T  2187 acccatggaaatgcactcaatgatg 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 2013 - 2071
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaa 235  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||||||||||||||    
T  2013 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattttactctagtaa 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 177 - 390
Target Start/End: Complemental strand, 49151 - 48936
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||||||||   |||  ||| |||| |||||| ||| |||||||||    
T  49151 taacggtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtaacttaattaaattacttttctcactaat-cactaaaagtaat 49054  T
Q  276 tctcaccaaaacttataatttt--acccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatg 372  Q
    || ||| |||| ||||||||||  |||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |  ||  ||||  ||| |||||    
T  49053 tcccactaaaaattataattttttacccgttctctcaaaatgaccaaaatacccctaagtctaaaatgactaaaatacccttcccacacaaaaacccatg 48954  T
Q  373 aaaatgcacccaatgatg 390  Q
    ||||||||||||||||||    
T  48953 aaaatgcacccaatgatg 48936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 177 - 368
Target Start/End: Original strand, 6268 - 6458
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||||||||||  |||| ||| |||||||||| ||||||||| ||||| |||||||||  |||   ||| ||||||||| |||||  ||| |||||||||    
T  6268 taacggtaaaatgtcactaacagtcactaaacggtaaaatctcaattt-actctagtatgttaatgaaataactattctcactaaa-cactaaaagtaat 6365  T
Q  276 tctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaac 368  Q
    ||||||| |||  ||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||| |  |||| |||||||||    
T  6366 tctcacccaaaactataattttacccgtcctcaccaaatgaccaaaatacccttaagtccaaaatgactaaaatacccttctagcacggaaac 6458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 282 - 389
Target Start/End: Complemental strand, 63385 - 63277
Alignment:
Q  282 caaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgca 380  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |  |||||||| |||| |||||||||||||    
T  63385 caaaacttataattttacccgttcacacaaaatgaccaaaatacccgtaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatgca 63286  T
Q  381 cccaatgat 389  Q
    || ||||||    
T  63285 ccaaatgat 63277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 131 - 390
Target Start/End: Original strand, 12870 - 13131
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactc 229  Q
    |||| |||||||||| |||||||| |  ||||||||||||||||| ||||||||||| ||||| |||   |||||||  |||||||  |||||  |||||    
T  12870 aaaatgtttctacacacacaacggcaaatcactaataacggtcaaataacggtaaaatatcaccaacgaccactaaatggtaaaatactaattactactc 12969  T
Q  230 tagtaacttaggaaaac-aactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||||||||| ||||  |||  |||| |||||  ||| |||| |||||||||  |||| |  |||||| |||| ||||||||| |||||||||||||||    
T  12970 tagtaacttagcaaaaataacggttctcactaac-cactaaaaataattctcattaaaattactaattt-acccattctcacaaaatgaccaaaataccc 13067  T
Q  328 ctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||| ||||||||||||| || |  | ||||||| ||| |||||||||||||| ||||||||    
T  13068 ctaagttcaaaatgactaaattacccttataacacgaaaacccatgaaaatgcactcaatgatg 13131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 12751 - 12784
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    |||||||| |||||||||||||||||||||||||    
T  12751 aatatcttgtgaaatgaaagtgtgaggaaatttc 12784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 17486 - 17326
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||||||||||||   ||| || |||| |||||| ||   ||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||||    
T  17486 ttactctagtaacttaatgaaataagtatttttactagttactaaaagtaattcccactaaaa-ttataattttacccgttctcacaaaatgaccaaaat 17388  T
Q  324 acccctaagtccaaaatgact-aaaataacactctaacacggaaa-ccatgaaaatgcaccca 384  Q
    | |||||||||| |||||||| |||||| |  ||||||||||||| |||||||||||||||||    
T  17387 atccctaagtcc-aaatgactaaaaatacccttctaacacggaaatccatgaaaatgcaccca 17326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 58; Significance: 6e-24; HSPs: 3)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 9658 - 9496
Alignment:
Q  225 tactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaata 324  Q
    |||||||||||||||| |||| |||  || | |||||  ||| ||| ||||||| ||||||||||||||| | |||||||| ||||| ||||||||||||    
T  9658 tactctagtaacttagtaaaataacagttttcactaac-cactaaaataattctaaccaaaacttataatat-acccgttcacacaaaatgaccaaaata 9561  T
Q  325 cccctaagtccaaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||| || ||||| |||||| || |  ||||||||| || |||||||||||||||||||||||    
T  9560 cccctaa-tctaaaattactaaattacccttctaacacgaaacccatgaaaatgcacccaatgatg 9496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 165 - 347
Target Start/End: Complemental strand, 203 - 22
Alignment:
Q  165 ataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattt-tactctagtaacttaggaaaacaactattcttactaatt 263  Q
    |||||||| | |||| ||||||| | ||| ||| || ||||||| |||||||  ||||   |||||||||||||||| |||| |||  || | |||||      
T  203 ataacggttacttaagggtaaaataccaccaacggtaactaaacggtaaaatactaatcactactctagtaacttagtaaaataacggttttcactaac- 105  T
Q  264 cacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaa 347  Q
    ||| ||| ||||||| || ||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  104 caccaaaataattctaacaaaaacttataatttc-cccgttcacacaaaatgaccaaaatacccctaagtccaaaatgactaaa 22  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 339 - 306
Alignment:
Q  13 aatatcttatgaaatgaaagtgtgaggaaatttc 46  Q
    ||||||||||||||||||||||||| ||||||||    
T  339 aatatcttatgaaatgaaagtgtgaagaaatttc 306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1979 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 292 - 390
Target Start/End: Original strand, 1 - 100
Alignment:
Q  292 aattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    |||||||||||| ||||| | ||||||||||||||| || ||||||||||||||||||| |  |||| |||||||| |||||||||||||||||||||||    
T  1 aattttacccgtcctcaccaaatgaccaaaatacccttacgtccaaaatgactaaaatacccttctagcacggaaacccatgaaaatgcacccaatgatg 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 8215 - 8317
Alignment:
Q  224 ttactctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaat 323  Q
    ||||||||||||||||| |||||| |  |||| |||| |   |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  8215 ttactctagtaacttagtaaaacatcggttctcactactcaccaaaagtaattctcaccaaaacttataa-tttacccgttctcacaaaatgaccaaaat 8313  T
Q  324 accc 327  Q
    ||||    
T  8314 accc 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 8046 - 8169
Alignment:
Q  5 tctccaacaatatcttatgaaatgaaagtgtgaggaaatttcttataagagtacgnnnnnnnnatcaagtccccttaatgggcctaaccctcaacctaat 104  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||| ||||| ||| |        |||||||| ||||||||| || ||||||| || ||||    
T  8046 tctccaaaaatatcttatgaa-tgaaagtatgaggaaatttctcataagtgta-ggtttttatatcaagtctccttaatggacccaaccctccacttaat 8143  T
Q  105 ggacttaaccaatttcttttcacatc 130  Q
    |||||||||| |||||| ||||||||    
T  8144 ggacttaacccatttctattcacatc 8169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 6115 - 6011
Alignment:
Q  223 tttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaa 321  Q
    ||||||||||||||| |   ||| ||||||||| |||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  6115 tttactctagtaactcaatgaaataactattctcactaat-cactaaaagtaattctcacccaaaattataattttacccgttctcacaaaatgaccaaa 6017  T
Q  322 ataccc 327  Q
    ||||||    
T  6016 ataccc 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 89396 - 89273
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||| |||| |||||||||| || |||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||||| || |  ||||||||| ||    
T  89396 aaaaataatcctcaccaaaatttctaattt-acccgtactcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaa 89298  T
Q  367 ac-catgaaaatgcacccaatgatg 390  Q
    || ||| ||||||||| ||||||||    
T  89297 actcataaaaatgcactcaatgatg 89273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 267 - 385
Target Start/End: Original strand, 8522 - 8641
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||||| ||||| | | | |  || ||||||||||||||||||| ||||||||||||||| || |  ||||| ||| ||    
T  8522 aaaagtaattctcaccaaaagttataaatttactcttacacttaaaatgaccaaaatacccctaattccaaaatgactaaattacccttctaaaacgaaa 8621  T
Q  367 ac-catgaaaatgcacccaa 385  Q
    || |||||||||||||||||    
T  8622 actcatgaaaatgcacccaa 8641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 327
Target Start/End: Complemental strand, 55729 - 55613
Alignment:
Q  210 gtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctca 308  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||  ||| |||||||| ||||||| ||||| ||| ||||||||| |||||    
T  55729 gtaaaatctcaattttactctagtaacttagtaaaacaactattc-taccaa-ccactaaaagtaactctcaccgaaactcatagttttacccgctctca 55632  T
Q  309 caatatgaccaaaataccc 327  Q
    | | ||||||||| |||||    
T  55631 cgaaatgaccaaattaccc 55613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 4e-16; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 57038 - 56978
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||    
T  57038 aaaagtaattctcacccaaaattataattttacccgttctcacaaaattaccaaaataccc 56978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 69798 - 69725
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaa 385  Q
    ||||||||||||||| ||||| ||||||||||||| || |  ||||||| ||||| ||||||||||||||||||    
T  69798 atgaccaaaatacccttaagttcaaaatgactaaattacccttctaacatggaaacccatgaaaatgcacccaa 69725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 73453 - 73507
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaag-tccaaaatgactaaaa 348  Q
    ||||||| ||||||||| |||| ||||||||||||||| | ||||||||||||||    
T  73453 tttacccattctcacaaaatgatcaaaatacccctaagttgcaaaatgactaaaa 73507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 33190 - 33112
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||||||||||||||| ||||||||||||||||| || |   |||||||||||| || ||||||||||||||| ||||    
T  33190 atgaccaaaatacccctgagtccaaaatgactaaattaccctactaacacggaaatccttgaaaatgcacccaaggatg 33112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 388
Target Start/End: Original strand, 4036 - 4158
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaa 366  Q
    |||||||||||||||||||| |||| | ||||| | | | |  || ||||||||||||||||||| ||||||||||||||| || |  ||||| ||| ||    
T  4036 aaaagtaattctcaccaaaagttattaatttactcttacacttaaaatgaccaaaatacccctaattccaaaatgactaaattacccttctaaaacgaaa 4135  T
Q  367 a-ccatgaaaatgcacccaatga 388  Q
    |  ||| ||||||||||||||||    
T  4136 attcataaaaatgcacccaatga 4158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 21875 - 21798
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||||||||| ||||||||||||||||| || |  ||||||||| ||| |||| ||||||||||| |||||    
T  21875 atgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaacccatcaaaatgcaccccatgat 21798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 389
Target Start/End: Complemental strand, 22072 - 21812
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactc 229  Q
    |||| |||||||||| | ||||||||  | |||||||||||||| |||||||||||| ||||  ||  |||||| ||| |||||||  |||||  |||||    
T  22072 aaaatgtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatcaacaatggtcacttaacggtaaaatactaattactactc 21973  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacccc 328  Q
    ||||||||||| |||| ||   ||||  ||||  ||| |||| | || |||| ||||| |||  | ||||||| | ||    | |||||||||||||||     
T  21972 tagtaacttagtaaaataatggttctcgctaa-acactaaaaattatcctcaacaaaatttactaatttacccttactagtgaaatgaccaaaataccca 21874  T
Q  329 taagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgat 389  Q
    ||||||||||| ||||||| || |  ||||||||| ||| |||| |||||||||||||||||    
T  21873 taagtccaaaacgactaaattacccttctaacacgaaaacccattaaaatgcacccaatgat 21812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 149241 - 149389
Alignment:
Q  177 taacggtaaaacatcacaaactgtcactaaacagtaaaatcttaattttactctagtaacttaggaaaacaactattcttactaattcac-aaaagtaat 275  Q
    |||| ||||||  |||| ||| |||||||||| ||||||||| ||||| ||||||||| ||||   ||| ||||||||| |||||  ||| |||||||||    
T  149241 taacagtaaaatgtcactaacggtcactaaacggtaaaatctcaattt-actctagtagcttactgaaataactattctcactaaa-cactaaaagtaat 149338  T
Q  276 tctca-ccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    ||||| |||||||  |||| ||||| ||||||||| | |||||||||||||||    
T  149339 tctcaaccaaaac--ataaatttactcgttctcaccaaatgaccaaaataccc 149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 390
Target Start/End: Original strand, 149373 - 149426
Alignment:
Q  337 aaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgatg 390  Q
    ||||||| |||||| |  ||||||| |||| |||||||||||||||||||||||    
T  149373 aaatgaccaaaatacccttctaacatggaacccatgaaaatgcacccaatgatg 149426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 476 - 412
Alignment:
Q  305 ctcacaatatgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaacc 369  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| || |  ||||||||| |||||    
T  476 ctcacaaaatgaccaaaatacccctgagtccaaaatgactaaattacccttctaacacgaaaacc 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 327
Target Start/End: Complemental strand, 12931 - 12871
Alignment:
Q  267 aaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaataccc 327  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| || ||||||||||||    
T  12931 aaaagtaattctcacctaatactataattttacccgttctcacaaaattaccaaaataccc 12871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 366 - 299
Alignment:
Q  322 atacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||||||||||| ||||||||||||||| |  || || ||||||| |||||||||||||||||||||    
T  366 atacccctaagtctaaaatgactaaaatacccttcaaatacggaaacccatgaaaatgcacccaatga 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 45153 - 45086
Alignment:
Q  322 atacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||||||||||| ||||||||||||||| |  || || ||||||| |||||||||||||||||||||    
T  45153 atacccctaagtctaaaatgactaaaatacccttcaaatacggaaacccatgaaaatgcacccaatga 45086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 284 - 350
Alignment:
Q  325 cccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||| |||||||||||| |||| || | |||||||||||||| |||||||||| ||||||||||||    
T  284 cccctgagtccaaaatgattaaattacccctctaacacggaaacccatgaaaatacacccaatgatg 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 390
Target Start/End: Complemental strand, 1827 - 1749
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatgatg 390  Q
    ||||| ||||||| |||||||| |||||||||||| || |  ||||||||| ||| |||||||||||||| ||||||||    
T  1827 atgacaaaaatactcctaagtcgaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcactcaatgatg 1749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 285
Target Start/End: Original strand, 707 - 863
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactc 229  Q
    |||| |||||||||| | ||||||||  | |||||||||||||| |||||||||||| ||||  ||  |||||  ||| ||||||| ||||||  ||| |    
T  707 aaaatgtttctacacactcaacggtaaattactaataacggtcacttaacggtaaaatatcaacaagggtcacgtaacggtaaaatattaattactaccc 806  T
Q  230 tagtaacttaggaaaacaactattcttactaattcac-aaaagtaattctcaccaaa 285  Q
    ||||||||||| |||| ||   |||| |||||  ||| |||| ||||||||||||||    
T  807 tagtaacttagcaaaataatggttctcactaaaacactaaaaataattctcaccaaa 863  T

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Target: scaffold0808 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 1776 - 1700
Alignment:
Q  313 atgaccaaaatacccctaagtccaaaatgactaaaataacactctaacacggaaa-ccatgaaaatgcacccaatga 388  Q
    ||||| ||||||||||  ||||||||||||||||| || |  ||||||||| ||| ||||||||||||||| |||||    
T  1776 atgactaaaataccccggagtccaaaatgactaaattaccgttctaacacgaaaacccatgaaaatgcacctaatga 1700  T

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Target: scaffold0141 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 23190 - 23289
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  23190 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 23288  T

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Target: scaffold0141; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 27445 - 27544
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| ||||||| || |||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  27445 ctctagtaacttaatgaaataaccattctcactaatt-actaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 27543  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 20739 - 20639
Alignment:
Q  227 ctctagtaacttaggaaaacaactattcttactaattcacaaaagtaattctcaccaaaacttataattttacccgttctcacaatatgaccaaaatacc 326  Q
    |||||||||||||   ||| ||| ||||| |||||||   ||||| ||||| ||| |||| |||||||||||||| | ||||||| || |||||||||||    
T  20739 ctctagtaacttaatgaaataaccattctcactaattactaaaagcaattcccactaaaaattataattttacccatcctcacaaaattaccaaaatacc 20640  T
Q  327 c 327  Q
    |    
T  20639 c 20639  T

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Target: scaffold0347 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 5056 - 5111
Alignment:
Q  295 tttacccgttctcacaatatgaccaaaatacccctaagtccaaaatgactaaaata 350  Q
    ||||||| | ||||||  ||||| |||||||||| |||||||||||||||||||||    
T  5056 tttacccttgctcacacaatgacaaaaatacccccaagtccaaaatgactaaaata 5111  T

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Target: scaffold0327 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 6272 - 6387
Alignment:
Q  131 aaaaggtttctacacccacaacggtatttcactaataacggtcaattaacggtaaaacatcacaaactgtcactaaacagtaaaatcttaatt-ttactc 229  Q
    |||| |||||||||| | ||| ||||  | |||||||||||||| |||||||||||| ||||  ||| |||||| ||  |||||||  |||||  |||||    
T  6272 aaaatgtttctacacactcaatggtaaattactaataacggtcacttaacggtaaaatatcaacaacggtcacttaaaggtaaaatactaattactactc 6371  T
Q  230 tagtaacttaggaaaa 245  Q
    ||||||||||| ||||    
T  6372 tagtaacttagtaaaa 6387  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 389
Target Start/End: Original strand, 36234 - 36287
Alignment:
Q  336 aaaatgactaaaataacactctaacacggaaaccatgaaaatgcacccaatgat 389  Q
    |||||||| |||||| |  ||||||||| || ||||||||||||||||||||||    
T  36234 aaaatgaccaaaatacccttctaacacgaaacccatgaaaatgcacccaatgat 36287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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