View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1149_low_110 (Length: 270)

Name: NF1149_low_110
Description: NF1149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1149_low_110
NF1149_low_110
[»] chr8 (39 HSPs)
chr8 (115-238)||(18029493-18029616)
chr8 (121-238)||(36912377-36912494)
chr8 (121-231)||(26632154-26632264)
chr8 (121-238)||(34955660-34955776)
chr8 (119-231)||(30470819-30470931)
chr8 (145-238)||(8609975-8610068)
chr8 (146-238)||(41477168-41477260)
chr8 (146-230)||(4625496-4625580)
chr8 (144-232)||(38584894-38584982)
chr8 (151-244)||(17741702-17741795)
chr8 (152-244)||(5212283-5212374)
chr8 (144-238)||(39811052-39811147)
chr8 (154-233)||(35099428-35099508)
chr8 (143-233)||(1958178-1958269)
chr8 (144-238)||(7990414-7990508)
chr8 (152-230)||(42860706-42860783)
chr8 (157-233)||(45101023-45101100)
chr8 (152-232)||(26749408-26749488)
chr8 (146-233)||(43524389-43524477)
chr8 (144-237)||(31129497-31129591)
chr8 (158-231)||(42859922-42859996)
chr8 (152-233)||(43618347-43618429)
chr8 (157-233)||(43525087-43525164)
chr8 (166-238)||(13814952-13815024)
chr8 (157-232)||(15053628-15053704)
chr8 (146-233)||(40283460-40283548)
chr8 (146-238)||(30289724-30289818)
chr8 (152-238)||(5735279-5735364)
chr8 (144-244)||(24431854-24431951)
chr8 (143-232)||(29637155-29637244)
chr8 (145-233)||(35931846-35931935)
chr8 (146-233)||(13947351-13947439)
chr8 (146-233)||(26244482-26244570)
chr8 (157-233)||(12272480-12272557)
chr8 (146-230)||(29731680-29731764)
chr8 (156-228)||(30532453-30532526)
chr8 (147-226)||(23353189-23353268)
chr8 (160-230)||(44503166-44503237)
chr8 (159-233)||(23549711-23549786)
[»] chr5 (43 HSPs)
chr5 (119-238)||(8176297-8176416)
chr5 (121-238)||(41263322-41263439)
chr5 (118-236)||(41153002-41153120)
chr5 (143-238)||(14278811-14278906)
chr5 (144-232)||(25032336-25032424)
chr5 (164-238)||(4577008-4577082)
chr5 (149-231)||(10569811-10569892)
chr5 (154-233)||(31013842-31013922)
chr5 (121-232)||(37882431-37882540)
chr5 (116-233)||(40888849-40888967)
chr5 (118-233)||(27942448-27942564)
chr5 (143-233)||(19241298-19241389)
chr5 (143-233)||(32976574-32976665)
chr5 (166-238)||(8681282-8681354)
chr5 (145-231)||(13479824-13479911)
chr5 (156-230)||(25670907-25670982)
chr5 (143-233)||(30648111-30648202)
chr5 (164-238)||(25652816-25652890)
chr5 (156-225)||(9274457-9274525)
chr5 (143-233)||(27407040-27407132)
chr5 (146-233)||(29619012-29619100)
chr5 (166-237)||(12912875-12912946)
chr5 (157-231)||(42807000-42807075)
chr5 (146-231)||(3454721-3454807)
chr5 (159-238)||(27407738-27407819)
chr5 (165-238)||(34918472-34918543)
chr5 (144-244)||(4938168-4938269)
chr5 (145-233)||(42317872-42317961)
chr5 (119-232)||(42608044-42608157)
chr5 (154-230)||(11954770-11954846)
chr5 (146-233)||(23089503-23089591)
chr5 (118-232)||(7650960-7651075)
chr5 (154-232)||(15972560-15972638)
chr5 (159-234)||(31008382-31008458)
chr5 (146-231)||(39008465-39008551)
chr5 (146-233)||(4219443-4219527)
chr5 (165-233)||(23649166-23649235)
chr5 (165-233)||(23809336-23809405)
chr5 (145-230)||(34529384-34529469)
chr5 (165-230)||(36572421-36572487)
chr5 (166-230)||(39238419-39238484)
chr5 (162-233)||(34709878-34709950)
chr5 (156-233)||(32363613-32363691)
[»] chr2 (35 HSPs)
chr2 (116-238)||(37245458-37245580)
chr2 (146-231)||(927893-927978)
chr2 (116-233)||(12854977-12855094)
chr2 (144-244)||(1987104-1987204)
chr2 (151-238)||(9074219-9074305)
chr2 (144-238)||(13151478-13151573)
chr2 (131-232)||(14152067-14152169)
chr2 (152-233)||(24997073-24997155)
chr2 (152-233)||(30822582-30822664)
chr2 (152-244)||(36855762-36855853)
chr2 (154-238)||(38901715-38901799)
chr2 (152-233)||(4296770-4296852)
chr2 (154-244)||(39434000-39434090)
chr2 (145-233)||(22351613-22351702)
chr2 (145-233)||(43021727-43021816)
chr2 (152-230)||(8852050-8852129)
chr2 (156-238)||(31192978-31193060)
chr2 (146-230)||(39490130-39490215)
chr2 (118-233)||(7588501-7588619)
chr2 (146-233)||(17485804-17485892)
chr2 (157-233)||(9117810-9117887)
chr2 (155-232)||(31174186-31174262)
chr2 (121-232)||(5146711-5146822)
chr2 (131-232)||(6362926-6363027)
chr2 (145-214)||(6333396-6333465)
chr2 (146-230)||(36209476-36209561)
chr2 (156-230)||(7763489-7763564)
chr2 (157-233)||(1073082-1073159)
chr2 (145-233)||(44279978-44280067)
chr2 (159-233)||(36526821-36526896)
chr2 (146-231)||(17929256-17929342)
chr2 (157-233)||(14382965-14383042)
chr2 (164-231)||(2780738-2780805)
chr2 (156-205)||(1308725-1308774)
chr2 (146-198)||(38997293-38997345)
[»] chr7 (35 HSPs)
chr7 (121-238)||(22737589-22737706)
chr7 (121-238)||(22191182-22191298)
chr7 (146-231)||(24793477-24793562)
chr7 (146-244)||(38970017-38970117)
chr7 (143-233)||(36518498-36518589)
chr7 (152-238)||(21654839-21654924)
chr7 (157-231)||(43571095-43571169)
chr7 (149-238)||(25218802-25218891)
chr7 (146-238)||(35193113-35193205)
chr7 (156-230)||(114486-114560)
chr7 (152-233)||(5813090-5813172)
chr7 (152-233)||(35029107-35029189)
chr7 (152-238)||(48984900-48984985)
chr7 (146-233)||(45549617-45549705)
chr7 (152-231)||(30630815-30630893)
chr7 (157-230)||(30566597-30566671)
chr7 (143-233)||(37951730-37951823)
chr7 (156-233)||(39769725-39769803)
chr7 (160-233)||(40302489-40302563)
chr7 (118-183)||(37888510-37888575)
chr7 (146-233)||(26812099-26812187)
chr7 (118-233)||(47159493-47159608)
chr7 (157-233)||(30720117-30720194)
chr7 (157-233)||(42881355-42881432)
chr7 (146-233)||(20354209-20354297)
chr7 (162-238)||(25038587-25038663)
chr7 (131-233)||(33078783-33078886)
chr7 (172-244)||(26013187-26013258)
chr7 (146-233)||(32130269-32130357)
chr7 (168-233)||(33508524-33508590)
chr7 (156-233)||(37887843-37887921)
chr7 (145-216)||(28318058-28318130)
chr7 (144-238)||(43202130-43202228)
chr7 (168-231)||(32748805-32748869)
chr7 (146-195)||(24204278-24204327)
[»] chr3 (68 HSPs)
chr3 (146-238)||(42601748-42601840)
chr3 (121-238)||(46572919-46573036)
chr3 (121-238)||(41890497-41890613)
chr3 (119-232)||(25832724-25832836)
chr3 (49-121)||(37167062-37167134)
chr3 (49-121)||(54684066-54684138)
chr3 (151-238)||(42601499-42601585)
chr3 (117-238)||(20139318-20139440)
chr3 (152-238)||(51427094-51427179)
chr3 (154-237)||(35424004-35424087)
chr3 (131-244)||(138947-139061)
chr3 (152-233)||(25790773-25790855)
chr3 (152-238)||(33934985-33935070)
chr3 (156-234)||(49147286-49147364)
chr3 (164-238)||(49823164-49823238)
chr3 (152-231)||(5845140-5845220)
chr3 (149-244)||(50033657-50033752)
chr3 (152-233)||(17466508-17466590)
chr3 (143-232)||(29701666-29701756)
chr3 (152-238)||(33748678-33748764)
chr3 (157-231)||(35853193-35853267)
chr3 (157-231)||(43022646-43022720)
chr3 (152-233)||(47144166-47144248)
chr3 (157-231)||(49710390-49710464)
chr3 (145-233)||(6048694-6048783)
chr3 (147-231)||(47701063-47701148)
chr3 (151-232)||(50017045-50017126)
chr3 (154-230)||(25450636-25450712)
chr3 (157-244)||(28410392-28410479)
chr3 (143-233)||(30418427-30418518)
chr3 (155-238)||(37410413-37410496)
chr3 (143-233)||(50415828-50415919)
chr3 (145-230)||(51999238-51999324)
chr3 (145-233)||(32120436-32120525)
chr3 (145-233)||(44084295-44084384)
chr3 (146-233)||(11908006-11908094)
chr3 (157-244)||(15493810-15493895)
chr3 (146-223)||(12974655-12974733)
chr3 (164-238)||(49357491-49357565)
chr3 (156-225)||(7521144-7521213)
chr3 (145-233)||(36178702-36178791)
chr3 (157-233)||(41183272-41183349)
chr3 (146-233)||(26165552-26165640)
chr3 (149-231)||(33795496-33795575)
chr3 (131-233)||(43473862-43473965)
chr3 (145-230)||(42560887-42560973)
chr3 (145-233)||(4045966-4046055)
chr3 (168-236)||(50176081-50176149)
chr3 (157-230)||(6832382-6832456)
chr3 (145-233)||(10426429-10426518)
chr3 (157-233)||(27847407-27847484)
chr3 (157-224)||(37183844-37183912)
chr3 (156-236)||(49407333-49407413)
chr3 (116-218)||(7008012-7008115)
chr3 (157-233)||(46123924-46124001)
chr3 (157-233)||(55026737-55026814)
chr3 (146-229)||(28155230-28155314)
chr3 (145-205)||(35472653-35472713)
chr3 (146-198)||(49028577-49028629)
chr3 (157-207)||(42258315-42258365)
chr3 (157-233)||(50734014-50734091)
chr3 (157-233)||(50778764-50778841)
chr3 (146-196)||(31170261-31170311)
chr3 (154-184)||(44995224-44995254)
chr3 (191-244)||(30862785-30862838)
chr3 (157-233)||(38572152-38572229)
chr3 (168-208)||(744225-744265)
chr3 (168-231)||(52000062-52000126)
[»] scaffold0100 (1 HSPs)
scaffold0100 (122-231)||(30539-30648)
[»] chr4 (49 HSPs)
chr4 (119-244)||(47750213-47750337)
chr4 (143-232)||(39113755-39113844)
chr4 (152-244)||(10089840-10089931)
chr4 (143-233)||(6290583-6290674)
chr4 (143-233)||(40721018-40721109)
chr4 (152-233)||(2215280-2215362)
chr4 (152-233)||(46917509-46917591)
chr4 (152-238)||(53184090-53184175)
chr4 (145-233)||(3533305-3533394)
chr4 (146-233)||(45081410-45081498)
chr4 (143-233)||(8991766-8991857)
chr4 (143-233)||(34199267-34199358)
chr4 (156-231)||(54356897-54356972)
chr4 (156-230)||(12158134-12158208)
chr4 (152-238)||(31848768-31848853)
chr4 (145-233)||(3618451-3618540)
chr4 (157-233)||(33604654-33604731)
chr4 (157-233)||(38173552-38173629)
chr4 (154-238)||(33526711-33526795)
chr4 (159-233)||(13110560-13110635)
chr4 (131-233)||(23540424-23540527)
chr4 (156-238)||(39049077-39049159)
chr4 (157-231)||(55408570-55408644)
chr4 (145-233)||(16020832-16020921)
chr4 (118-233)||(23389927-23390043)
chr4 (118-233)||(28899290-28899406)
chr4 (121-195)||(35394877-35394951)
chr4 (146-230)||(13094391-13094476)
chr4 (144-232)||(51392215-51392301)
chr4 (157-233)||(55560477-55560554)
chr4 (154-230)||(19409125-19409201)
chr4 (146-233)||(35809149-35809237)
chr4 (146-233)||(48403898-48403986)
chr4 (157-232)||(39533281-39533356)
chr4 (116-230)||(48506607-48506722)
chr4 (159-233)||(52017343-52017418)
chr4 (144-214)||(55933-56003)
chr4 (156-233)||(4981505-4981583)
chr4 (144-232)||(34564108-34564196)
chr4 (154-244)||(36656555-36656642)
chr4 (156-233)||(18469365-18469444)
chr4 (159-229)||(56054016-56054087)
chr4 (145-233)||(16175013-16175102)
chr4 (164-233)||(33077872-33077941)
chr4 (157-229)||(33523267-33523340)
chr4 (150-231)||(40596763-40596844)
chr4 (159-244)||(53348048-53348134)
chr4 (166-230)||(19272789-19272854)
chr4 (168-233)||(31336352-31336418)
[»] chr1 (43 HSPs)
chr1 (121-238)||(44651032-44651148)
chr1 (144-231)||(44334270-44334357)
chr1 (115-233)||(45239091-45239209)
chr1 (149-231)||(8464085-8464167)
chr1 (164-238)||(44451264-44451338)
chr1 (150-231)||(17783364-17783445)
chr1 (152-231)||(27630460-27630540)
chr1 (152-231)||(37420344-37420424)
chr1 (143-238)||(3755022-3755117)
chr1 (132-233)||(8468293-8468395)
chr1 (152-233)||(31468122-31468204)
chr1 (152-237)||(643817-643901)
chr1 (145-233)||(48388106-48388195)
chr1 (156-233)||(14096684-14096762)
chr1 (144-238)||(20584845-20584939)
chr1 (146-231)||(29523686-29523772)
chr1 (145-233)||(2478326-2478415)
chr1 (146-230)||(41542313-41542395)
chr1 (157-233)||(45456149-45456226)
chr1 (157-233)||(48404324-48404401)
chr1 (131-233)||(36230325-36230428)
chr1 (157-233)||(19578908-19578985)
chr1 (145-233)||(51494470-51494559)
chr1 (118-231)||(52933769-52933877)
chr1 (118-231)||(52941404-52941512)
chr1 (154-238)||(44929284-44929368)
chr1 (146-231)||(33164395-33164481)
chr1 (152-233)||(37646558-37646640)
chr1 (157-233)||(23092763-23092840)
chr1 (157-233)||(30878542-30878619)
chr1 (157-233)||(31159381-31159458)
chr1 (145-238)||(40500382-40500474)
chr1 (157-229)||(29919364-29919437)
chr1 (159-233)||(37822565-37822641)
chr1 (167-238)||(51520221-51520293)
chr1 (156-233)||(35847119-35847197)
chr1 (156-238)||(36302975-36303057)
chr1 (157-230)||(45623531-45623605)
chr1 (156-238)||(48729315-48729397)
chr1 (165-233)||(37691288-37691357)
chr1 (156-230)||(39149069-39149143)
chr1 (146-204)||(45362701-45362759)
chr1 (168-231)||(47300497-47300561)
[»] chr6 (22 HSPs)
chr6 (152-231)||(29428519-29428598)
chr6 (151-238)||(6380483-6380569)
chr6 (152-233)||(631509-631591)
chr6 (152-231)||(34328272-34328352)
chr6 (157-231)||(6725626-6725700)
chr6 (144-233)||(8660542-8660632)
chr6 (143-233)||(34838563-34838654)
chr6 (144-244)||(22627819-22627920)
chr6 (152-231)||(197795-197875)
chr6 (158-238)||(32359743-32359823)
chr6 (152-233)||(17961262-17961344)
chr6 (157-233)||(10883868-10883945)
chr6 (157-233)||(24348429-24348506)
chr6 (157-233)||(30446240-30446317)
chr6 (143-233)||(8669872-8669963)
chr6 (161-233)||(12501832-12501905)
chr6 (159-233)||(12512911-12512986)
chr6 (157-233)||(26654334-26654411)
chr6 (157-233)||(26760304-26760381)
chr6 (180-233)||(8218964-8219018)
chr6 (157-224)||(12480313-12480381)
chr6 (131-187)||(34242242-34242298)
[»] scaffold0012 (1 HSPs)
scaffold0012 (146-238)||(124001-124091)
[»] scaffold0054 (1 HSPs)
scaffold0054 (143-233)||(57741-57832)
[»] scaffold0362 (1 HSPs)
scaffold0362 (157-233)||(5321-5398)
[»] scaffold0016 (1 HSPs)
scaffold0016 (146-233)||(66070-66158)


Alignment Details
Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 18029616 - 18029493
Alignment:
Q  115 aaccttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaac 214  Q
    |||||||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  18029616 aaccttagaccatctccaatggttcaacacattcaacaccattcgacacccactttttcaattcccaacactccacatcattttctctctcttattcaac 18029517  T
Q  215 actcattcaacttttaccttctcc 238  Q
    |||||||||||||||||| |||||    
T  18029516 actcattcaacttttaccctctcc 18029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 36912377 - 36912494
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  36912377 agaccatccccaatggttcaacatattcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcat 36912476  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  36912477 tcaacttttaccctctcc 36912494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 26632264 - 26632154
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  26632264 agaccatcctcaatggtttacaccattcaacaccattcaacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactcat 26632165  T
Q  221 tcaacttttac 231  Q
    |||||||||||    
T  26632164 tcaacttttac 26632154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 34955776 - 34955660
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||||||||||||    | ||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34955776 agaccatccccaatggtttttttctttcaacaccattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcat 34955678  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  34955677 tcaacttttaccctctcc 34955660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 30470931 - 30470819
Alignment:
Q  119 ttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactc 218  Q
    ||||||||||||||||||||||   ||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  30470931 ttagaccatccccaatggtttacaccattcaacaccattcaagatccattttttcaattcccaacactccacgtcattttctctctcttattcaacactc 30470832  T
Q  219 attcaacttttac 231  Q
    |||||||||||||    
T  30470831 attcaacttttac 30470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 8610068 - 8609975
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  8610068 attcaacaccattcaacattcactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctcc 8609975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 41477168 - 41477260
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  41477168 ttcaacaccattcaacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttaccatctcc 41477260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 4625580 - 4625496
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaactttta 4625496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 38584982 - 38584894
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  38584982 cattcaacaccattcaacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttacc 38584894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 17741702 - 17741795
Alignment:
Q  151 caccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||||||||||| ||||| |||||    
T  17741702 caccattcaacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatgat 17741795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 5212283 - 5212374
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  5212283 accattcaacacc-acttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgat 5212374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 39811147 - 39811052
Alignment:
Q  144 cattcaacaccattcaacacccactttttc-aattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||||||||  |||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  39811147 cattcaacaccattcaacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctcc 39811052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 35099428 - 35099508
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||| ||||||||    
T  35099428 cattcaacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaatttttacct 35099508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 1958269 - 1958178
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  1958269 acattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 1958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 7990414 - 7990508
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| ||||||||||||||| ||| ||||  ||||||||||  | ||||||| ||||||||||||||||||||||||||||||| |||||    
T  7990414 cattcaacaacattcaacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctctcc 7990508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 42860706 - 42860783
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||    
T  42860706 accattcaacacc-actttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacattta 42860783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 45101100 - 45101023
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  45101100 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 45101023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 26749488 - 26749408
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||| || || |||||||||| ||||||||||||||||    
T  26749488 accattcaacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttacc 26749408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 43524477 - 43524389
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  43524477 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacct 43524389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 31129591 - 31129497
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttaccttctc 237  Q
    |||| |||| || |||||||| ||||||||||||| |||||||||| |||||||| |||||||| |||| |||||||||||||||||||| ||||    
T  31129591 catttaacaacactcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttaccatctc 31129497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 42859922 - 42859996
Alignment:
Q  158 caacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  42859922 caacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttac 42859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 43618429 - 43618347
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||  ||||||| ||||||||    
T  43618429 accattcaacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacct 43618347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 43525164 - 43525087
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||| || ||||||||||||||||| ||||||||    
T  43525164 tcaacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaatttttacct 43525087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 13814952 - 13815024
Alignment:
Q  166 actttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctcc 13815024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 15053628 - 15053704
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacc 232  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||| ||||||| |||||||    
T  15053628 tcaacacccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacccattcaatttttacc 15053704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 40283460 - 40283548
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  40283460 ttcaatacctttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacct 40283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 30289818 - 30289724
Alignment:
Q  146 ttcaacaccattcaacacccacttttt--caattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||| | |||||||||  |||||| |||||||| | |||||||| |||||||||||||| || ||||||||||||||| |||||    
T  30289818 ttcaacaccattcaatatccactttttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctcc 30289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 5735279 - 5735364
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| ||||||||||||  ||| |||| | |||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  5735279 accattcaacacc-actttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctcc 5735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 24431951 - 24431854
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatga 243  Q
    ||||||||| ||||||||| ||||||||||||||  |||||||||| ||||   |||||||||||||||| ||| |||||||||||||| ||||| ||||    
T  24431951 cattcaacatcattcaacatccactttttcaattttcaacactccaaatca--ctttctctcttattcaatact-attcaacttttaccctctccaatga 24431855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 29637244 - 29637155
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||| || | |||| ||| |||||||||| ||||||||||| || ||||| ||| ||||||| |||||||||||||||||||||    
T  29637244 acattcaacaacacttaacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaacttttacc 29637155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 35931846 - 35931935
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | ||||||| |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  35931846 attcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 35931935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 13947351 - 13947439
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||| |||||||| | |||| | ||||||||| ||||||| ||||||||    
T  13947351 ttcaatacccttcaacacctactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacct 13947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 26244482 - 26244570
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| |||||||  ||||||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  26244482 ttcaatacccttcaacattcactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaatttttacct 26244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 12272557 - 12272480
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| ||||||||||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||| ||||||||    
T  12272557 tcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaatttttacct 12272480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 29731680 - 29731764
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttta 230  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  ||| |||||||||| | ||||||||| ||||||| |||||    
T  29731680 ttcaatacccttcaacacccactttttcaattcccaacactccacgtca-tttttctctcataattcaacacccattcaattttta 29731764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 30532526 - 30532453
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttt 228  Q
    |||||| || |||||||||||||| |||||||| ||||||||| |||||| |||||||||| ||||||||||||    
T  30532526 ttcaacgcctactttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaacttt 30532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 23353268 - 23353189
Alignment:
Q  147 tcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaact 226  Q
    |||||| || |||||  |||||||||||||| ||||||||||| |||  ||| ||||||||||| |||| ||||||||||    
T  23353268 tcaacaacactcaacgtccactttttcaatttccaacactccacatccctttctctctcttatttaacattcattcaact 23353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 44503166 - 44503237
Alignment:
Q  160 acacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||| |||||||||||||||||||||||||  ||||||| |||||||| ||| ||||| ||||||| |||||    
T  44503166 acacacactttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaattttta 44503237  T

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Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 23549711 - 23549786
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||| | |||||||||||||||||||||| |  ||||| |||||| | ||||||||| ||||||| ||||||||    
T  23549711 aacacctattttttcaattcccaacactccacactattttctctctcataattcaacacccattcaatttttacct 23549786  T

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Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 8176416 - 8176297
Alignment:
Q  119 ttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactc 218  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  8176416 ttagaccatccccaatggttcaacacattcaacatcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactc 8176317  T
Q  219 attcaacttttaccttctcc 238  Q
    |||||||||||||| |||||    
T  8176316 attcaacttttaccctctcc 8176297  T

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Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 41263322 - 41263439
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  41263322 agaccatccccaatggttcaacacattcaacaccattcaacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacattcat 41263421  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  41263422 tcaacttttaccctctcc 41263439  T

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Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 41153120 - 41153002
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacact 217  Q
    |||||||||||||||||  || || ||||||||||  |||||||| ||| ||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  41153120 cttagaccatccccaattcttaaacacattcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctcttattcaacact 41153021  T
Q  218 cattcaacttttaccttct 236  Q
    |||||||||||||||||||    
T  41153020 cattcaacttttaccttct 41153002  T

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Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 14278811 - 14278906
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||| || |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  14278811 acattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 14278906  T

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Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 25032336 - 25032424
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    ||||||| ||| |||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  25032336 cattcaataccgttcaacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 25032424  T

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Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 4577008 - 4577082
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 4577082  T

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Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 10569892 - 10569811
Alignment:
Q  149 aacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  10569892 aacacctttcaacacc-actttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttac 10569811  T

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Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 31013922 - 31013842
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  31013922 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacct 31013842  T

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Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 37882540 - 37882431
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    ||||||||  |||||||  || |||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||  |||||||||||| |||||    
T  37882540 agaccatctacaatggtgaaaaacattcaacaacgttcaacacccattttttcaattcccaacactccacatcatttttt--ctcttattcaacgctcat 37882443  T
Q  221 tcaacttttacc 232  Q
    ||||||||||||    
T  37882442 tcaacttttacc 37882431  T

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Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 40888849 - 40888967
Alignment:
Q  116 accttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaac 214  Q
    ||||||||||||   |||||||  || |||||||| | | |||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  40888849 accttagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaac 40888948  T
Q  215 actcattcaacttttacct 233  Q
    || ||||||| ||||||||    
T  40888949 acccattcaatttttacct 40888967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 27942448 - 27942564
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacac 216  Q
    ||||||||||   |||||||  || |||||||||| | ||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||||    
T  27942448 cttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacac 27942547  T
Q  217 tcattcaacttttacct 233  Q
     ||||||| ||||||||    
T  27942548 ccattcaatttttacct 27942564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 19241298 - 19241389
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  19241298 acattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 19241389  T

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Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 32976665 - 32976574
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  32976665 acattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 32976574  T

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Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 8681354 - 8681282
Alignment:
Q  166 actttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||    
T  8681354 actttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctcc 8681282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 13479911 - 13479824
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||    
T  13479911 attcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttac 13479824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 25670982 - 25670907
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttta 230  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| |||||    
T  25670982 ttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttta 25670907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 30648202 - 30648111
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| |  |||||||||||||||||||||||| |||||||| | |||||| |||||||| ||||||||||||||||| ||||||||    
T  30648202 acattcaacaaccctcaacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactcattcaatttttacct 30648111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 25652816 - 25652890
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| || ||||||| |||||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctcc 25652890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 9274525 - 9274457
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaac 225  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  9274525 ttcaacatccactttttcaattcccaacactccacatca-tttttctctcttatttaacactcattcaac 9274457  T

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Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 27407132 - 27407040
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attc-aacactcattcaacttttacct 233  Q
    |||||||||| | || ||||| ||||||||||||||||||||||||| || ||||| |||||||| |||| ||||||||||||||||||||||    
T  27407132 acattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctcttaattctaacactcattcaacttttacct 27407040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 29619100 - 29619012
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| | |||| | ||||||||| ||||||| ||||||||    
T  29619100 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacct 29619012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 12912875 - 12912946
Alignment:
Q  166 actttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctc 237  Q
    ||||||| |||||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctc 12912946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 42807075 - 42807000
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||    
T  42807075 tcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttac 42807000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 3454721 - 3454807
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    ||||| ||| ||||||| ||||||||||||||| |||||||||| |||||||| |||||| | ||||||||||||||||| ||||||    
T  3454721 ttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttac 3454807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 27407819 - 27407738
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctct--tattcaacactcattcaacttttaccttctcc 238  Q
    |||| |||||||||||||| |||| |||||| |||||||| |||||||  |||||||||||||||||||||||||| |||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctcc 27407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 34918543 - 34918472
Alignment:
Q  165 cactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| ||||||||||| ||||||||  || ||||||||||||||||||||||||||||| |||||    
T  34918543 cactttttcaatttccaacactccacatcatttt--ctttcttattcaacactcattcaacttttaccctctcc 34918472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 4938168 - 4938269
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttaccttctcctatg 242  Q
    |||||||||  ||||||||| || ||||||||||| ||| |||| | |||||||| |||||||| |||||||||| |||||||||||||| ||||| |||    
T  4938168 cattcaacaatattcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacactaattcaacttttaccctctccaatg 4938267  T
Q  243 at 244  Q
    ||    
T  4938268 at 4938269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 42317872 - 42317961
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||| | ||||| ||||||||    
T  42317872 attcaacaaccttcaacattcactttttcaatttccaacactccatatcattttctctctcttaattcaacaccctttcaatttttacct 42317961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 42608157 - 42608044
Alignment:
Q  119 ttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactc 218  Q
    ||||||||||  |||||||  || |||||||||| ||||||||| ||  ||||||||||   |||||||||  ||||||| ||||| ||||||||||||     
T  42608157 ttagaccatctacaatggtgaaaaacattcaacaacattcaacatccgttttttcaattattaacactccacgtcattttctctcttttattcaacactt 42608058  T
Q  219 attcaacttttacc 232  Q
    ||||||||||||||    
T  42608057 attcaacttttacc 42608044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 11954770 - 11954846
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||||||| ||||||  ||||  |||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  11954770 cattcaacacctacttttctaattatcaacactccacatcattttctctctcttattcaacattcattcaactttta 11954846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 23089503 - 23089591
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||||||||||||| ||||||||||||| || |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  23089503 ttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaatttttacct 23089591  T

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Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 7650960 - 7651075
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacac 216  Q
    ||||||||||   |||||||  || |||||||||| | || |||||| | |||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  7650960 cttagaccatttacaatggtaaaatacattcaacaacctttaacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacac 7651059  T
Q  217 tcattcaacttttacc 232  Q
     |||| || |||||||    
T  7651060 ccatttaatttttacc 7651075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 15972560 - 15972638
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||| |||| |||||||||||||| |||||| || | || ||||| |||||||||||||||| ||||||||||||||||    
T  15972560 catttaacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttacc 15972638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 31008458 - 31008382
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacctt 234  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||||| ||| ||||| ||||||| |||||||||    
T  31008458 aacacccactttttcaattctcaacacttcacatcattttctctctcttaatttaacacccattcaatttttacctt 31008382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 39008465 - 39008551
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| ||| |||| |||||| | ||||||||  ||||||| ||||||    
T  39008465 ttcaatacccttcaacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaatttttac 39008551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 4219527 - 4219443
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||||||||||||||||||||||||||| || |||||||| ||    | ||||||||| ||||||| ||||||||    
T  4219527 ttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctc---ataattcaacacccattcaatttttacct 4219443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 23649235 - 23649166
Alignment:
Q  165 cactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||| | ||| || ||||||||    
T  23649235 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacct 23649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 23809336 - 23809405
Alignment:
Q  165 cactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||| | ||| || ||||||||    
T  23809336 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacct 23809405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 34529469 - 34529384
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    |||||||| ||||||||||| ||||||| ||||| ||||||  || |||||||| ||||| ||||| |||| ||||| ||||||||    
T  34529469 attcaacaacattcaacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaactttta 34529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 36572487 - 36572421
Alignment:
Q  165 cactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    ||||||||||||| |||| |||||| |||||||| |||||||| ||||||||| ||||||| |||||    
T  36572487 cactttttcaatttccaatactccacatcattttctctctcttaattcaacacccattcaattttta 36572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 39238419 - 39238484
Alignment:
Q  166 actttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttta 230  Q
    |||||||||||||||||||||||| |||||||| |||||| | ||||||||  ||||||| |||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 39238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 34709878 - 34709950
Alignment:
Q  162 acccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||  ||||| ||||  |||||||||||||||| ||||||||| |||| || ||||||||    
T  34709878 acccactttttcaattttcaacattccacgtcattttttctctcttaattcaacacccatttaatttttacct 34709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 32363691 - 32363613
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||| ||||  |||||||||| || ||||| ||||| || ||||||||| |||| || ||||||||    
T  32363691 ttcaacacccacttttttaattttcaacactccacattattttctctcttttaattcaacacccatttaatttttacct 32363613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 116 - 238
Target Start/End: Original strand, 37245458 - 37245580
Alignment:
Q  116 accttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaaca 215  Q
    ||||||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  37245458 accttagaccatccccaatggttcaacatatttaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaaca 37245557  T
Q  216 ctcattcaacttttaccttctcc 238  Q
    ||||||||||||||||| |||||    
T  37245558 ctcattcaacttttaccctctcc 37245580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 927978 - 927893
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  927978 ttcaacactattcaacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 927893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 12854977 - 12855094
Alignment:
Q  116 accttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaac 214  Q
    |||||||||||||  |||||||| || ||| | || |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  12854977 accttagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaac 12855075  T
Q  215 actcattcaacttttacct 233  Q
    |||||||||| ||||||||    
T  12855076 actcattcaatttttacct 12855094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 1987104 - 1987204
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatga 243  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||    
T  1987104 cattcaacactattcaacattcactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctctccaatga 1987203  T
Q  244 t 244  Q
    |    
T  1987204 t 1987204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 9074305 - 9074219
Alignment:
Q  151 caccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  9074305 caccattcaacacc-acttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 9074219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 13151573 - 13151478
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || || ||||||| |||||| ||||||||||||||||||||||||| |||||    
T  13151573 cattcaacaacattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctcc 13151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 14152169 - 14152067
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| ||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||| ||||||||||||    
T  14152169 caatggttaaaaccattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaactttt 14152070  T
Q  230 acc 232  Q
    |||    
T  14152069 acc 14152067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 24997073 - 24997155
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  24997073 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacct 24997155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 30822664 - 30822582
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  30822664 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacct 30822582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 36855853 - 36855762
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||| |||||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36855853 accatttaacaccca-tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctccaatgat 36855762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 38901715 - 38901799
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  38901715 cattcaacacacactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctcc 38901799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 4296852 - 4296770
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||    
T  4296852 accattcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaatttttacct 4296770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 39434090 - 39434000
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||| ||||||||||||||||||| | ||||| |||||    
T  39434090 cattcaacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaacttttatcctctccaatgat 39434000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 22351702 - 22351613
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  22351702 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 22351613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 43021727 - 43021816
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  43021727 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 43021816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 8852050 - 8852129
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| || |||||    
T  8852050 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaattttta 8852129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 31193060 - 31192978
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| | |||||||||| ||||||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||    
T  31193060 ttcaacacctattttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctcc 31192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 39490130 - 39490215
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| |||||    
T  39490130 ttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaattttta 39490215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 7588619 - 7588501
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc---ttattcaac 214  Q
    ||||||||||   |||||||  || |||||||||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||   | |||||||    
T  7588619 cttagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaac 7588520  T
Q  215 actcattcaacttttacct 233  Q
    || ||||||| ||||||||    
T  7588519 acccattcaatttttacct 7588501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 17485804 - 17485892
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  17485804 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacct 17485892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 9117810 - 9117887
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||  ||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||    
T  9117810 tcaacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacactcattcaatttttacct 9117887  T

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Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 31174262 - 31174186
Alignment:
Q  155 attcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||| | |||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||    
T  31174262 attcaatatccactttttcaattcccaacactccacattatttat-ctctcttattcaacactcattcaacttttacc 31174186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 5146822 - 5146711
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactca 219  Q
    |||||||||||||||||||    | ||||| ||| ||||||||||| ||||| |||| ||||||||||| |||||||| |||||| ||||||||||||||    
T  5146822 agaccatccccaatggtttttt-ctttcaatacccttcaacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactca 5146724  T
Q  220 ttcaacttttacc 232  Q
    || ||||||||||    
T  5146723 tttaacttttacc 5146711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 6362926 - 6363027
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctta-ttcaacactcattcaactttt 229  Q
    |||||||| ||  ||||||||| |  |||||| |||||||||||||||| ||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  6362926 caatggttaaacccattcaacaacggtcaacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactcattcaactttt 6363024  T
Q  230 acc 232  Q
    |||    
T  6363025 acc 6363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 6333465 - 6333396
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaac 214  Q
    |||||||| ||||||||| |||||||||||||||| || | ||||||||||||| |||||||||||||||    
T  6333465 attcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctctcttattcaac 6333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 36209561 - 36209476
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    ||||| ||| ||||||||| ||||||||||||| |||||||||| |||||||| ||| |||| ||||||||||||||||| |||||    
T  36209561 ttcaatacccttcaacacctactttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaattttta 36209476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 7763564 - 7763489
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    ||||||||| ||||||||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||| |||||    
T  7763564 ttcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttta 7763489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 1073159 - 1073082
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| ||||||||||||||  ||||||||||  ||||||| |||||||| ||||||||||||||||| ||||||||    
T  1073159 tcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaatttttacct 1073082  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 44279978 - 44280067
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | || |||||||||||||||||||  |||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  44279978 attcaacaacctttaacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 44280067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 36526821 - 36526896
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||| |||| || ||||||||    
T  36526821 aacacccactttttcaattcccaacactccacattattttctctctcttaatttaacacccatttaatttttacct 36526896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 17929342 - 17929256
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    ||||| ||| ||||||| ||| |||||||||||||||||||||| |||||||| |||||| | ||| ||||| ||||||| ||||||    
T  17929342 ttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctcataatttaacacccattcaatttttac 17929256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 14382965 - 14383042
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||||||||   ||||| ||||||||    
T  14382965 tcaacatccactttttcaattcctaacactccacatcattttctctctcttaattcaacaccttttcaatttttacct 14383042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 2780805 - 2780738
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||| |||| || | |||||||| |||||||||||||||||  ||| |||||||||    
T  2780805 ccactttttcaattcctaacattctacatcattttctctctcttattcaacacctatttaacttttac 2780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 1308774 - 1308725
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc 205  Q
    ||||||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  1308774 ttcaacatccactttttcaatttccaacactccacatcattttctctctc 1308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 38997345 - 38997293
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcatttt 198  Q
    ||||||| | ||||||||||||||||||||||| |||||| ||| ||||||||    
T  38997345 ttcaacaaccttcaacacccactttttcaattcgcaacacaccacatcatttt 38997293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 22737706 - 22737589
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  22737706 agaccatccccaatggttcaacatattcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcat 22737607  T
Q  221 tcaacttttaccttctcc 238  Q
    ||||||||||||||||||    
T  22737606 tcaacttttaccttctcc 22737589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 22191182 - 22191298
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||| ||||||||    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  22191182 agaccatccctaatggtttttaccattcaacaccattcaacacc-actttttcaatttccaacactccacatcattttctctctcttattcaacactcat 22191280  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  22191281 tcaacttttaccctctcc 22191298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 24793477 - 24793562
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  24793477 ttcaacaccattcaacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttac 24793562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 38970017 - 38970117
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttct--ctcttattcaacactcattcaacttttaccttctcctatga 243  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||| |  |||||||||||||||||||||||||||||| ||||| ||||    
T  38970017 ttcaacacctttcaacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttaccgtctccaatga 38970116  T
Q  244 t 244  Q
    |    
T  38970117 t 38970117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 36518498 - 36518589
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  36518498 acattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacct 36518589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 21654839 - 21654924
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||    
T  21654839 accattcaacacc-actttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 21654924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 43571169 - 43571095
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  43571169 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 43571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 25218891 - 25218802
Alignment:
Q  149 aacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||| |||||||||| |||||    
T  25218891 aacaccatttaacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctcc 25218802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 35193205 - 35193113
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||  ||||||||| ||||||||||||||||||||||||| || ||||| | ||| ||||||||||||||||||||||||||| |||||    
T  35193205 ttcaacattattcaacactcactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttaccatctcc 35193113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 114486 - 114560
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  114486 ttcaacacccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaactttta 114560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 5813090 - 5813172
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||| |||||| ||||||||    
T  5813090 accattcaacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaatttttacct 5813172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 35029189 - 35029107
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  35029189 accattcaacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaatttttacct 35029107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 48984900 - 48984985
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||| |||||    
T  48984900 accattcaacacc-actttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttaccatctcc 48984985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 45549705 - 45549617
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||| ||||||||    
T  45549705 ttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaatttttacct 45549617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 30630893 - 30630815
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||||||||| ||||||| |||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||    
T  30630893 accattcaacacc-acttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttac 30630815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 30566597 - 30566671
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||| |||||    
T  30566597 tcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaattttta 30566671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 37951730 - 37951823
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcatttt--ttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||   |||||||| ||||||||| ||||||| ||||||||    
T  37951730 acattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacacccattcaatttttacct 37951823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 39769725 - 39769803
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||| ||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  39769725 ttcaacacccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacct 39769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 40302563 - 40302489
Alignment:
Q  160 acacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  40302563 acacccattttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacct 40302489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 37888510 - 37888575
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaac 183  Q
    |||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||    
T  37888510 cttagaccatcctcaatggttaaacacattcaacaccattcaacatccactttttcaattcccaac 37888575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 26812099 - 26812187
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || | |||||| |||||||||| ||||||||    
T  26812099 ttcaatacccttcaacacccattttttcaattcccaacactccatatcattttatctttcataattcaatactcattcaaattttacct 26812187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 47159608 - 47159493
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacac 216  Q
    ||||||||||   |||||||  || |||||||||| | ||||||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||    
T  47159608 cttagaccatttacaatggtaaaatacattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctcttaattcaacac 47159510  T
Q  217 tcattcaacttttacct 233  Q
     ||||||| ||||||||    
T  47159509 ccattcaatttttacct 47159493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 30720117 - 30720194
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| |||||||||||| ||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  30720117 tcaacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 30720194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 42881355 - 42881432
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||  |||||| ||||||||    
T  42881355 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccaattcaatttttacct 42881432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 20354209 - 20354297
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||||| |||||||||||||| ||||||||| |||||||||||| || | ||||||||| ||||||| ||||||||    
T  20354209 ttcaatacccttcaacacctactttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaatttttacct 20354297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 25038663 - 25038587
Alignment:
Q  162 acccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||| |||||||| |||| || |||||||| |||||||||||| |||||||||||| ||||||| |||||    
T  25038663 acccacttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctctcc 25038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 33078886 - 33078783
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| || | |||||||| |  |||||| ||||||||||||||||||||||||||  | ||||| |||||||| |||||||| |||||||| ||||    
T  33078886 caatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattcattcaattttt 33078787  T
Q  230 acct 233  Q
    ||||    
T  33078786 acct 33078783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 26013258 - 26013187
Alignment:
Q  172 tcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||  ||||| |||||    
T  26013258 tcaatttccaacactccatatcattttctctctctt-ttcaatactcattcaacttttactctctccaatgat 26013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 32130357 - 32130269
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| |||||| | ||| || || ||||||| ||||||||    
T  32130357 ttcaataccatgcaacacccacttttttaattcccaacactccacatcattttctctctcataatttaatacccattcaatttttacct 32130269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 33508590 - 33508524
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||| |  ||||||| |||||||| ||||||||||||||||| ||||||||    
T  33508590 tttttcaattcccaacactctacgtcattttctctctcttaattcaacactcattcaatttttacct 33508524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 37887843 - 37887921
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| |||||||| ||||||||  |||| || ||||||||    
T  37887843 ttcaacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccatttaatttttacct 37887921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 28318130 - 28318058
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacac 216  Q
    |||||||| | || |||| ||||||||| |||||||||||||||| |||||||| |||||||| |||||||||    
T  28318130 attcaacaacctttaacatccacttttttaattcccaacactccacatcattttctctctcttaattcaacac 28318058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 43202228 - 43202130
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaa-cactccatatcattttttctctcttattcaacactc---attcaacttttaccttctcc 238  Q
    |||||||||  |||||||| ||||||||||||| ||||| |||| || || ||||| ||||||||| |||||||||   |||||||||||||| |||||    
T  43202228 cattcaacaaaattcaacatccactttttcaatgcccaatcacttcacattattttctctctcttactcaacactcattattcaacttttaccctctcc 43202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 32748805 - 32748869
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||| || ||||| |||||| | ||| ||||||||||||| ||||||    
T  32748805 tttttcaattcccaacactccacattattttctctctcataatttaacactcattcaatttttac 32748869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 24204327 - 24204278
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcat 195  Q
    ||||| ||| ||||||||||||||||||||||| ||||| |||| |||||    
T  24204327 ttcaatacccttcaacacccactttttcaattctcaacaatccacatcat 24204278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 42601748 - 42601840
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  42601748 ttcaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccttctcc 42601840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 46573036 - 46572919
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    ||||||||  |||||||  || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  46573036 agaccatctacaatggtgaaaaacattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactcat 46572937  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  46572936 tcaacttttaccctctcc 46572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 41890497 - 41890613
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    ||||||||| |||||||||    ||||||||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  41890497 agaccatccacaatggttttcaccattcaacaccattcaacatc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcat 41890595  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  41890596 tcaacttttaccctctcc 41890613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 25832836 - 25832724
Alignment:
Q  119 ttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactc 218  Q
    |||||||||||  ||||||||    ||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  25832836 ttagaccatccttaatggtttttaccattcaacaccattcaacacc-actttttcaattcccaacacttcacatcattttctctctcttattcaacactc 25832738  T
Q  219 attcaacttttacc 232  Q
    ||||||||||||||    
T  25832737 attcaacttttacc 25832724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 37167134 - 37167062
Alignment:
Q  49 gatgacaaaaatgctaacaaccttaaaccgattctctcactatccctttgtcccccaccaactcacaacctta 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37167134 gatgacaaaaatgctaacaaccttaaacccattctctcactatccctttgtcccccaccaactcacaacctta 37167062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 54684066 - 54684138
Alignment:
Q  49 gatgacaaaaatgctaacaaccttaaaccgattctctcactatccctttgtcccccaccaactcacaacctta 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54684066 gatgacaaaaatgctaacaaccttaaacccattctctcactatccctttgtcccccaccaactcacaacctta 54684138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 42601585 - 42601499
Alignment:
Q  151 caccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  42601585 caccattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 42601499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 117 - 238
Target Start/End: Original strand, 20139318 - 20139440
Alignment:
Q  117 ccttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaaca 215  Q
    ||||||||||||  |||||||| ||  ||||||||| || |||| ||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||    
T  20139318 ccttagaccatctacaatggttaaaaccattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctcttaattcaaca 20139417  T
Q  216 ctcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||    
T  20139418 ctcattcaacttttaccttctcc 20139440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 51427094 - 51427179
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  51427094 accattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctcc 51427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 35424087 - 35424004
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctc 237  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35424087 cattcaacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctc 35424004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 138947 - 139061
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| ||  ||||||||| || |||||| || ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  138947 caatggttaaaaccattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaactttt 139046  T
Q  230 accttctcctatgat 244  Q
    ||| ||||| |||||    
T  139047 accctctccaatgat 139061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 25790855 - 25790773
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  25790855 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacct 25790773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 33934985 - 33935070
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||    
T  33934985 accattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctcc 33935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 49147364 - 49147286
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacctt 234  Q
    ||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  49147364 ttcaacatctactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacctt 49147286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 49823238 - 49823164
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  49823238 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctcc 49823164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 5845220 - 5845140
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  5845220 accattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 5845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 50033657 - 50033752
Alignment:
Q  149 aacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||||||||| ||||||||| |||| |||||| || | |||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  50033657 aacaccattcaacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctctccaatgat 50033752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 17466508 - 17466590
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  17466508 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 17466590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 29701666 - 29701756
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacc 232  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| |||||||    
T  29701666 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacc 29701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 33748678 - 33748764
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  33748678 accattcaacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttaccttctcc 33748764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 35853267 - 35853193
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35853267 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 35853193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 43022646 - 43022720
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  43022646 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 43022720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 47144166 - 47144248
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||| ||||||||    
T  47144166 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaatttttacct 47144248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 49710464 - 49710390
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  49710464 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 49710390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 6048783 - 6048694
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  6048783 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 6048694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 47701148 - 47701063
Alignment:
Q  147 tcaacaccattcaacacccactttttcaattcccaacactccatatca-ttttttctctcttattcaacactcattcaacttttac 231  Q
    |||||| || |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  47701148 tcaacaacactcaacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaacttttac 47701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 50017045 - 50017126
Alignment:
Q  151 caccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||| | |||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||    
T  50017045 caccattcaaaatccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttacc 50017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 25450712 - 25450636
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||||||    
T  25450712 cattcaacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaactttta 25450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 28410392 - 28410479
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||||||||||||  ||||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||    
T  28410392 tcaacacccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttaccatctccaatgat 28410479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 30418518 - 30418427
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  30418518 acattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 30418427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 37410496 - 37410413
Alignment:
Q  155 attcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||  |||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  37410496 attcaacaccatctttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctctcc 37410413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 50415919 - 50415828
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  50415919 acattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 50415828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 51999324 - 51999238
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| |||||    
T  51999324 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 51999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 32120525 - 32120436
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  32120525 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 32120436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 44084295 - 44084384
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  44084295 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 44084384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 11908006 - 11908094
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||| ||||||| ||||||||    
T  11908006 ttcaatacccttcaacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaatttttacct 11908094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 15493895 - 15493810
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    ||||||||| ||||||||||||||||||||||| |||| |||  ||||||||||||||| |||||||||||||||| ||||| |||||    
T  15493895 tcaacaccctctttttcaattcccaacactccacatcacttt--ctctcttattcaacattcattcaacttttaccatctccaatgat 15493810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 12974655 - 12974733
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattca 223  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||    
T  12974655 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattca 12974733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 49357565 - 49357491
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| |||||| |||| | ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  49357565 ccacttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctctcc 49357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 7521213 - 7521144
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaac 225  Q
    |||||||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||||||||||||    
T  7521213 ttcaacacccgctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaac 7521144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 36178791 - 36178702
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||||| ||||||||||||||||||||||||||||||| || |||||||| |||||| | ||||||||  ||||||| ||||||||    
T  36178791 attcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatccattcaatttttacct 36178702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 41183272 - 41183349
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||| ||| ||||||||    
T  41183272 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatacaatttttacct 41183349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 26165640 - 26165552
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  26165640 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacct 26165552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 33795575 - 33795496
Alignment:
Q  149 aacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||| ||||||||| ||||||||||| |||   ||||||| ||| ||||||||||||||||||||||||||||    
T  33795575 aacaccattcaacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttac 33795496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 43473862 - 43473965
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| || | |||||||| |  |||||| ||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| ||||||| ||||    
T  43473862 caatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacacccattcaattttt 43473961  T
Q  230 acct 233  Q
    ||||    
T  43473962 acct 43473965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 42560887 - 42560973
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||||| | ||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| | ||||| |||||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacaccctttcaattttta 42560973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 4045966 - 4046055
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | ||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| | || || ||||||||    
T  4045966 attcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccttttaatttttacct 4046055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 50176149 - 50176081
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttct 236  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| |  ||||||||||||| ||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttactttct 50176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 6832382 - 6832456
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||| |||||||||||||||||||||||||| |||||||| | ||| || ||||||||||||||||| |||||    
T  6832382 tcaacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaattttta 6832456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 10426518 - 10426429
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||||| || ||| || || ||||||| ||||||||    
T  10426518 attcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctcttttaatttaatacccattcaatttttacct 10426429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 27847407 - 27847484
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| |||| || ||||||||    
T  27847407 tcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccatttaatttttacct 27847484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 37183912 - 37183844
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaa 224  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| |||||||| ||||||||| |||||||    
T  37183912 tcaacactcactttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 37183844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 49407413 - 49407333
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttct 236  Q
    ||||||| |||||||||||||| | |||||| ||  | ||||| ||||| |||||||| ||||||||||||||||||||||    
T  49407413 ttcaacatccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttaccttct 49407333  T

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Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 7008012 - 7008115
Alignment:
Q  116 accttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaac 214  Q
    ||||||||||||   |||||||  || | |||||||| |  ||||||||||||||||||||| ||||||||| | |||||||| |||||||| |||||||    
T  7008012 accttagaccatttacaatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactctacatcattttctctctcttaattcaac 7008111  T
Q  215 actc 218  Q
    ||||    
T  7008112 actc 7008115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 46123924 - 46124001
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||| |||||||||||| |||||| || | |||||||| |||||| | ||||||||||||||||| ||||||||    
T  46123924 tcaacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaatttttacct 46124001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 55026737 - 55026814
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctta-ttcaacactcattcaacttttacct 233  Q
    |||||||||| ||||||||||  ||||||| ||  ||||||| ||||||||| |||||||||||||||| ||||||||    
T  55026737 tcaacacccattttttcaattttcaacacttcacttcattttctctctcttaattcaacactcattcaatttttacct 55026814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 28155314 - 28155230
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttt 229  Q
    ||||| ||| |||||||||||||||||||||| | ||||||| | || ||||| |||||| | ||||||||||||||||| ||||    
T  28155314 ttcaatacccttcaacacccactttttcaatttctaacactctacataattttctctctcataattcaacactcattcaattttt 28155230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 35472713 - 35472653
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc 205  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||| || ||||| ||||||    
T  35472713 attcaatacccttcaacatccactttttcaattcccaacactccacattattttctctctc 35472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 49028629 - 49028577
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcatttt 198  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||||||||||    
T  49028629 ttcaatacccttcaacacacacttttttaattcccaacactccatatcatttt 49028577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 42258315 - 42258365
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt 207  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||    
T  42258315 tcaacacccactttttctcttcccaacactccacatcattttctctctctt 42258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 50734014 - 50734091
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||| |||| |||||| |||||||| |||||||| |||||| ||  |||||| ||||||||    
T  50734014 tcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacctattcaatttttacct 50734091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 50778841 - 50778764
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||| |||| |||||| |||||||| |||||||| |||||| ||  |||||| ||||||||    
T  50778841 tcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacctattcaatttttacct 50778764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 31170311 - 31170261
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcatt 196  Q
    ||||| ||| ||||||||||| |||||||||||||||||||| | ||||||    
T  31170311 ttcaatacccttcaacacccattttttcaattcccaacactctacatcatt 31170261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 44995224 - 44995254
Alignment:
Q  154 cattcaacacccactttttcaattcccaaca 184  Q
    |||||||||||||||||||||||||||||||    
T  44995224 cattcaacacccactttttcaattcccaaca 44995254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 30862838 - 30862785
Alignment:
Q  191 atcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||| |||||||||||||||||||||| ||  |||||| ||||| |||||    
T  30862838 atcattttctctctcttattcaacactcatttaatatttaccctctccaatgat 30862785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 38572229 - 38572152
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||| ||| ||||||||||||| |||||||||| || ||||| |||||||| ||||||||   |||||| ||||||||    
T  38572229 tcaatacctactttttcaattctcaacactccacattattttctctctcttaattcaacatctattcaatttttacct 38572152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 744225 - 744265
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctctta 208  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  744225 tttttcaattaccaacactccacatcattttctctctctta 744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 52000126 - 52000062
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttac 231  Q
    ||||| |||||||||||||||| |||||||| |||||| | |||||||| | |||||| ||||||    
T  52000126 ttttttaattcccaacactccacatcattttctctctcataattcaacatttattcaatttttac 52000062  T

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Target: scaffold0100 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 30648 - 30539
Alignment:
Q  122 gaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcatt 221  Q
    ||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||    
T  30648 gaccatccccaatggttaaacccattcaacaccattcaacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttatt 30549  T
Q  222 caacttttac 231  Q
    ||||||||||    
T  30548 caacttttac 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 47750337 - 47750213
Alignment:
Q  119 ttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactc 218  Q
    |||||| |||||||||||||||   ||||||||||||||||||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||||    
T  47750337 ttagacaatccccaatggtttataccattcaacaccattcaacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactc 47750239  T
Q  219 attcaacttttaccttctcctatgat 244  Q
    |||||||||||||| ||||| |||||    
T  47750238 attcaacttttaccctctccaatgat 47750213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 39113844 - 39113755
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||| || |||||||  |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  39113844 acattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaacttttacc 39113755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 10089840 - 10089931
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    ||||||||||||||||||||||||||  ||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  10089840 accattcaacacccactttttcaattttcaatactccacatcatttt-tctctcttattcaacactcattcaacttttaccctctccaatgat 10089931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 6290583 - 6290674
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  6290583 acattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 6290674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 40721018 - 40721109
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  40721018 acattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 40721109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 2215362 - 2215280
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||    
T  2215362 accattcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacct 2215280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 46917591 - 46917509
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  46917591 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 46917509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 53184175 - 53184090
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  53184175 accattcaacacc-actttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctcc 53184090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 3533394 - 3533305
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  3533394 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 3533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 45081498 - 45081410
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  45081498 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacct 45081410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 8991766 - 8991857
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  8991766 acattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 8991857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 34199358 - 34199267
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  34199358 acattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 34199267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 54356972 - 54356897
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||    
T  54356972 ttcaacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttac 54356897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 12158134 - 12158208
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||| |||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  12158134 ttcaacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaactttta 12158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 31848853 - 31848768
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||    
T  31848853 accattcaacacc-attttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctcc 31848768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 3618540 - 3618451
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  3618540 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 3618451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 33604654 - 33604731
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||| ||||||||    
T  33604654 tcaacacccactttttcaattcccaacactccacatcattttctctatcttaattcaacactcattcaatttttacct 33604731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 38173552 - 38173629
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||| ||||||||    
T  38173552 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatccaatttttacct 38173629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 33526711 - 33526795
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||| | ||| |||||||| |||||||||||||||||| |||||    
T  33526711 cattcaacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctcc 33526795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 13110560 - 13110635
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||| ||||||||    
T  13110560 aacacccactttttcaattcccaacactccacaacattttttctctcttaattcaacacccattcaatttttacct 13110635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 23540527 - 23540424
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| || | |||||||| | |||||||||||||||||||||| ||||||||| | |||||||| |||||||| ||||||||| ||||||| ||||    
T  23540527 caatggttaaacatattcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacacccattcaattttt 23540428  T
Q  230 acct 233  Q
    ||||    
T  23540427 acct 23540424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 39049159 - 39049077
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||| ||||||||| |||| ||||||||||| |||||||| ||| |||||||||||| |||||||||||||||| |||||    
T  39049159 ttcaacatccacttttttaatttccaacactccacatcattttctctttcttattcaacattcattcaacttttaccctctcc 39049077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 55408644 - 55408570
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||| |||||||||  |||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  55408644 tcaacactcactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttac 55408570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 16020832 - 16020921
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||  ||||||| ||||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacct 16020921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 23390043 - 23389927
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacac 216  Q
    ||||||||||||||||||||  || | ||| || ||| |||||||| ||||||||||||||||||||||||| || ||||| |||||| | |||||| ||    
T  23390043 cttagaccatccccaatggtaaaaaaaatttaatacctttcaacactcactttttcaattcccaacactccacattattttctctctcataattcaatac 23389944  T
Q  217 tcattcaacttttacct 233  Q
    |||||||| | ||||||    
T  23389943 tcattcaattgttacct 23389927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 28899290 - 28899406
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacac 216  Q
    ||||||||||   |||||||| || |||||||||| |  |||||||||||||||||||||||||| | |||| ||| |||| |||||||| |||||||||    
T  28899290 cttagaccatttacaatggttaaacacattcaacaaccctcaacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacac 28899389  T
Q  217 tcattcaacttttacct 233  Q
     ||||||| ||||||||    
T  28899390 ccattcaatttttacct 28899406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 121 - 195
Target Start/End: Original strand, 35394877 - 35394951
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcat 195  Q
    |||||||||||||| ||| || ||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  35394877 agaccatccccaatagttaaacacattcaacaccattcaacacacaccttttcaatttccaacactccacatcat 35394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 13094476 - 13094391
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttta 230  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||||| ||||||| |||||    
T  13094476 ttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaattttta 13094391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 51392215 - 51392301
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||  ||||||||| |||||||| ||||| |||||||||| |||||||||  |||||||||||||| || |||||||||||||    
T  51392215 cattcaacattattcaacacacacttttttaattctcaacactccacatcattttt--tctcttattcaacattcgttcaacttttacc 51392301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 55560554 - 55560477
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||||  |||||| ||||||||    
T  55560554 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacctattcaatttttacct 55560477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 19409125 - 19409201
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    |||||||||||||||||||||||| |||| |||| | || ||||| |||||||||||||| | ||||||||||||||    
T  19409125 cattcaacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattcattcaactttta 19409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 35809149 - 35809237
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| ||||||| ||||||||||||||||||||| |||| |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  35809149 ttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaatttttacct 35809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 48403986 - 48403898
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| |||||||  ||||||||||||| ||||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  48403986 ttcaatacccttcaacattcactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacct 48403898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 39533356 - 39533281
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    ||||||||||||||||||||| |||| | ||||  ||||||| ||| |||||||||||| ||||||||||||||||    
T  39533356 tcaacacccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttacc 39533281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 48506722 - 48506607
Alignment:
Q  116 accttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaac 214  Q
    ||||||||||||   |||||||  || | |||||||| |  |||||| ||||||||||||||  |||||||||| |||||||| |||||||| |||||||    
T  48506722 accttagaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacatcattttctctctcttaattcaac 48506623  T
Q  215 actcattcaactttta 230  Q
    |||||||||| |||||    
T  48506622 actcattcaattttta 48506607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 52017343 - 52017418
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||| ||||||| | |||||||| |||||||| ||||||||||||||||| ||||||||    
T  52017343 aacacctactttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattcaatttttacct 52017418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 56003 - 55933
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaac 214  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||||  |||||||| | |||||||||||||    
T  56003 cattcaacaccattgaacactcactttttcaatttccaacactccgcatcattttctttctcttattcaac 55933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 4981505 - 4981583
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||||||  ||| || ||||||||    
T  4981505 ttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacacctatttaatttttacct 4981583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 34564108 - 34564196
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacc 232  Q
    |||||||||  |||||||| ||| ||||| ||||| |||||||  |||| ||||| |||||||||||||||| ||||| ||||||||||    
T  34564108 cattcaacattattcaacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttacc 34564196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 36656555 - 36656642
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||||||||| || |||||||||||   |||||||| |||||||| ||||||||| |||| |||||||||||||||||  ||||| |||||    
T  36656555 cattcaacactcattttttcaattc---acactccacatcattttctctctcttaatcaatactcattcaacttttacactctccgatgat 36656642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 18469444 - 18469365
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatca-ttttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| | ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||  ||||||| ||||||||    
T  18469444 ttcaactctcactttttcaattcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacct 18469365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 56054016 - 56054087
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||| |||||||||||||||||||||||||| |||||||| |||||||| |||| |||| ||||||| ||||    
T  56054016 aacatccactttttcaattcccaacactccacatcattttctctctcttaattctacacccattcaattttt 56054087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 16175102 - 16175013
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | ||||||||||| ||||||||||  |||||||||| |||||||| || ||||| ||||||||| | ||||| ||||||||    
T  16175102 attcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacaccctttcaatttttacct 16175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 33077941 - 33077872
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttacct 233  Q
    |||||||||||||| ||||||||||| |||||||| ||||| | ||| ||||| ||||||| ||||||||    
T  33077941 ccactttttcaatttccaacactccacatcattttctctctttaatttaacacccattcaatttttacct 33077872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 33523267 - 33523340
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||| ||||||||||||||||||||| |||| |||||||| |||||||| ||||||||  ||||||| ||||    
T  33523267 tcaacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatccattcaattttt 33523340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 40596844 - 40596763
Alignment:
Q  150 acaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||||||| |  || ||||||||||  ||||||||||  ||||||| ||||| |||||||||||| |||||||||||||    
T  40596844 acaccattcaagattcattttttcaattttcaacactccacgtcattttctctcttttattcaacacttattcaacttttac 40596763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 53348134 - 53348048
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttaccttctcctatgat 244  Q
    |||| ||||||||||||||  ||||| | || |||||||| |||||| |||||||||| ||||| |||||||||| ||||| |||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaatgat 53348048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 19272789 - 19272854
Alignment:
Q  166 actttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaactttta 230  Q
    |||||||||||||||||||||||| |||||||| |||||| | ||||||||  ||||||| |||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 19272854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 31336418 - 31336352
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||| ||||||||||  ||||||| |||||||| ||||||||| | ||||| ||||||||    
T  31336418 tttttcaattctcaacactccacgtcattttctctctcttaattcaacaccctttcaatttttacct 31336352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 44651032 - 44651148
Alignment:
Q  121 agaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcat 220  Q
    |||||||||||||||||||    | ||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  44651032 agaccatccccaatggtttttttctttcaacaccattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcat 44651130  T
Q  221 tcaacttttaccttctcc 238  Q
    |||||||||||| |||||    
T  44651131 tcaacttttaccctctcc 44651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 44334270 - 44334357
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  44334270 cattcaataccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttac 44334357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 45239091 - 45239209
Alignment:
Q  115 aaccttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaa 213  Q
    ||||| ||||||||  |||||||| || ||| | || |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  45239091 aacctaagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaa 45239189  T
Q  214 cactcattcaacttttacct 233  Q
    ||||||||||| ||||||||    
T  45239190 cactcattcaatttttacct 45239209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 8464085 - 8464167
Alignment:
Q  149 aacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  8464085 aacaccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttac 8464167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 44451338 - 44451264
Alignment:
Q  164 ccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctcc 44451264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 17783364 - 17783445
Alignment:
Q  150 acaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||||||||| ||||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  17783364 acaccattcaacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttac 17783445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 27630540 - 27630460
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  27630540 accattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 27630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 37420424 - 37420344
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  37420424 accattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 37420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 3755117 - 3755022
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||||| || ||||||||||||||| |||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||||    
T  3755117 acattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttaccctctcc 3755022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 8468293 - 8468395
Alignment:
Q  132 aatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    ||||||| || |||||||||| |  ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||||    
T  8468293 aatggttaaaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaactttta 8468392  T
Q  231 cct 233  Q
    |||    
T  8468393 cct 8468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 31468122 - 31468204
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||| ||||||||    
T  31468122 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaatttttacct 31468204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 643901 - 643817
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctc 237  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||| ||||    
T  643901 accattcaacacc-actttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctc 643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 48388195 - 48388106
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  48388195 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 48388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 14096684 - 14096762
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  14096684 ttcaacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaatttttacct 14096762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 20584939 - 20584845
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||  | ||||||| ||||||||||||||||||||||||| |||||||| || |||||||| |||||| |||||||||||| |||||||    
T  20584939 cattcaacaaaactcaacacacactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaacttttatcttctcc 20584845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 29523686 - 29523772
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||  ||||||| ||||||    
T  29523686 ttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttac 29523772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 2478415 - 2478326
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| ||||||||    
T  2478415 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaatttttacct 2478326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 41542313 - 41542395
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||  ||||||||||||||||    
T  41542313 ttcaacatcattcaacatccactttttcaattcccaacactccacatcatattctctctcttattca--actcattcaactttta 41542395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 45456226 - 45456149
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||    
T  45456226 tcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacct 45456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 48404324 - 48404401
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  48404324 tcaacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacct 48404401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 36230325 - 36230428
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||||| || |||||||||| |  |||||||| ||||||||||||||||||||| || |||||||| |||||||| ||||||||| ||||||| ||||    
T  36230325 caatggttaaacacattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattcaattttt 36230424  T
Q  230 acct 233  Q
    ||||    
T  36230425 acct 36230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 19578985 - 19578908
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  19578985 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 19578908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 51494559 - 51494470
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | ||||||||||||||||| ||||| |||||||||| |||||||| |||||||| |||||||| |||||||| ||||||||    
T  51494559 attcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattcattcaatttttacct 51494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 52933877 - 52933769
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacact 217  Q
    |||||||||||||||||||||||   |||||||||||      |||   ||||||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  52933877 cttagaccatccccaatggtttacaccattcaacaccc-----cactttctttttcaattcctaacactccacgtcattttctctctcttattcaacact 52933783  T
Q  218 cattcaacttttac 231  Q
    ||||||||||||||    
T  52933782 cattcaacttttac 52933769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 52941512 - 52941404
Alignment:
Q  118 cttagaccatccccaatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacact 217  Q
    |||||||||||||||||||||||   |||||||||||      |||   ||||||||||||| |||||||||  ||||||| ||||||||||||||||||    
T  52941512 cttagaccatccccaatggtttacaccattcaacaccc-----cactttctttttcaattcctaacactccacgtcattttctctctcttattcaacact 52941418  T
Q  218 cattcaacttttac 231  Q
    ||||||||||||||    
T  52941417 cattcaacttttac 52941404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 44929368 - 44929284
Alignment:
Q  154 cattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||| ||| ||||||||||| ||||| | || |||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  44929368 cattcaacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctcc 44929284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 33164395 - 33164481
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    ||||| ||| || |||||||||||||||||||||||||| |||| || ||||| |||||||| ||||||||||||||||| ||||||    
T  33164395 ttcaataccttttaacacccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaatttttac 33164481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 37646640 - 37646558
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||| ||||||| |||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  37646640 accatttaacacctacttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 37646558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 23092763 - 23092840
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||| ||||||  ||||||||    
T  23092763 tcaacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcagtttttacct 23092840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 30878619 - 30878542
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||  ||||||| ||||||||    
T  30878619 tcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacct 30878542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 31159381 - 31159458
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| | |||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  31159381 tcaacatctactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 31159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 40500382 - 40500474
Alignment:
Q  145 attcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||| |||| |||||||||||||||| |||| |||||| || || ||||| || ||||||||||||||||||| |||||||||| |||||    
T  40500382 attcaacatcatttaacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctctcc 40500474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 29919364 - 29919437
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttt 229  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||| ||||    
T  29919364 tcaacatctactttttcaattcccaacactccatatcattttctctctcttaattcaacacctattcaattttt 29919437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 37822565 - 37822641
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttct-ctctt-attcaacactcattcaacttttacct 233  Q
    ||||| |||||||||||||| |||||||||| |||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  37822565 aacactcactttttcaattctcaacactccacatcattttctctcctcttaattcaacactcattcaatttttacct 37822641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 51520221 - 51520293
Alignment:
Q  167 ctttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||  |||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| |||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctcc 51520293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 35847197 - 35847119
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||||| ||||||||| |||| ||||||||||| |||||||| |||||| | ||||||||| ||||||| ||||||||    
T  35847197 ttcaacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaatttttacct 35847119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 36302975 - 36303057
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||| ||| ||||||||||  |||||||||| || ||||| ||| |||||||||||||  |||||||||||||| |||||    
T  36302975 ttcaacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctcc 36303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 45623605 - 45623531
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaactttta 230  Q
    |||||| | |||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||| || |||||    
T  45623605 tcaacatctactttttcaattcctaacactccacatcattttctctctcttaattcaacactcatttaattttta 45623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 48729315 - 48729397
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||| ||| ||||||||||   |||||| || |||||||| ||| ||||||||||||| ||||||||||||||| |||||    
T  48729315 ttcaacatccattttttcaatttttaacacttcacatcattttctctttcttattcaacacacattcaacttttaccctctcc 48729397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 37691357 - 37691288
Alignment:
Q  165 cactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||| || ||||| |||||||| ||||||||  ||||||| ||||||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacct 37691288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 39149069 - 39149143
Alignment:
Q  156 ttcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaactttta 230  Q
    ||||||||||| ||||||  ||| |||||||| | |||||||| ||| |||||||||| | ||||||||||||||    
T  39149069 ttcaacacccattttttctcttctcaacactctacatcattttctctatcttattcaatattcattcaactttta 39149143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 45362701 - 45362759
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctct 204  Q
    ||||| ||| ||||||||||| ||||||||||| |||||||||| |||| ||| |||||    
T  45362701 ttcaatacccttcaacacccattttttcaattctcaacactccaaatcactttctctct 45362759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 47300561 - 47300497
Alignment:
Q  168 tttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    ||||||||||| || ||||||| |||||||| ||||| || ||||||||| ||||||| ||||||    
T  47300561 tttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaatttttac 47300497  T

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Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 29428598 - 29428519
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  29428598 accattcaacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 29428519  T

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Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 6380569 - 6380483
Alignment:
Q  151 caccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  6380569 caccattcaacacc-actttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctcc 6380483  T

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Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 631509 - 631591
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||    
T  631509 accattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacct 631591  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 34328272 - 34328352
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  34328272 accattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttac 34328352  T

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Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 6725700 - 6725626
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttac 231  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  6725700 tcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttac 6725626  T

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Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 8660542 - 8660632
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  8660542 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaatttttacct 8660632  T

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Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 34838563 - 34838654
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||| | | |||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  34838563 acattcaataaccttcaacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 34838654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 22627819 - 22627920
Alignment:
Q  144 cattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattc-aacttttaccttctcctatg 242  Q
    ||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||| ||||| ||||||||||  ||||| |||||||| ||||||| |||    
T  22627819 cattcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaaacttttatcttctccaatg 22627918  T
Q  243 at 244  Q
    ||    
T  22627919 at 22627920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 197795 - 197875
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttac 231  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||| ||||||||| ||||||| ||||||    
T  197795 accattcaacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaatttttac 197875  T

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Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 32359743 - 32359823
Alignment:
Q  158 caacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    |||||| || ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| | ||||||| |||||    
T  32359743 caacactcaatttttcaattcccaacattccacatcattttctctctcttattcaacactcattccatttttaccctctcc 32359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 17961344 - 17961262
Alignment:
Q  152 accattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||  ||| ||| ||||||||    
T  17961344 accattcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaatttttacct 17961262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 10883868 - 10883945
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||| |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  10883868 tcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 10883945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 24348429 - 24348506
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||  ||||||| ||||||||    
T  24348429 tcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacatccattcaatttttacct 24348506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 30446240 - 30446317
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| |||||||||||| ||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  30446240 tcaacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 30446317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 8669872 - 8669963
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| | ||||||| |||||||||||||| |||||||| || || ||||| |||||||| ||||||||| ||||||| ||||||||    
T  8669872 acattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacccattcaatttttacct 8669963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 12501832 - 12501905
Alignment:
Q  161 cacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||||||||||| ||||| |||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  12501832 cacccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacccattcaatttttacct 12501905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 12512911 - 12512986
Alignment:
Q  159 aacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||| ||||||||||||||  ||||| |||| ||||||||||||||||| ||||||||| ||||||| ||||||||    
T  12512911 aacatccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaatttttacct 12512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 26654411 - 26654334
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||| ||||||||||||| |||||||| || ||||||| |||||| | ||||||||| ||||||| ||||||||    
T  26654411 tcaacacctactttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacct 26654334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 26760381 - 26760304
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    |||||||| ||||||||||||| |||||||| || ||||||| |||||| | ||||||||| ||||||| ||||||||    
T  26760381 tcaacacctactttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacct 26760304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 8218964 - 8219018
Alignment:
Q  180 caacactccatatcattttttctctctta-ttcaacactcattcaacttttacct 233  Q
    |||||||||| || ||||| ||||||||| |||||||| ||||||||||||||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttacct 8219018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 12480313 - 12480381
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaa 224  Q
    |||||| |||||||||||||| | ||||||| | |||||||| || ||||| ||||||||| |||||||    
T  12480313 tcaacatccactttttcaatttcaaacactctacatcattttctcactcttaattcaacacccattcaa 12480381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 34242242 - 34242298
Alignment:
Q  131 caatggtttaagacattcaacaccattcaacacccactttttcaattcccaacactc 187  Q
    |||||||| || || ||||||| |  ||||||| |||||||||||||||||||||||    
T  34242242 caatggttcaaaactttcaacaaccctcaacactcactttttcaattcccaacactc 34242298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 124001 - 124091
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctcttattcaacactcattcaacttttaccttctcc 238  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |||||    
T  124001 ttcaacaccattcaacatccactttttcaatttccaacactccacatcattttt--tctcttattcaacactcattcaacttttaccatctcc 124091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 57832 - 57741
Alignment:
Q  143 acattcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||    
T  57832 acattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacct 57741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 5398 - 5321
Alignment:
Q  157 tcaacacccactttttcaattcccaacactccatatcattttttctctctt-attcaacactcattcaacttttacct 233  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||  ||||||| ||||||||    
T  5398 tcaacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccattcaatttttacct 5321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 66158 - 66070
Alignment:
Q  146 ttcaacaccattcaacacccactttttcaattcccaacactccatatcattttttctctc-ttattcaacactcattcaacttttacct 233  Q
    ||||| ||| || |||||| ||||||||||||| |||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||    
T  66158 ttcaataccttttaacacctactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttacct 66070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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