View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1149_low_15 (Length: 589)

Name: NF1149_low_15
Description: NF1149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1149_low_15
NF1149_low_15
[»] chr1 (6 HSPs)
chr1 (147-437)||(51866402-51866692)
chr1 (29-70)||(51866806-51866847)
chr1 (472-505)||(18610773-18610806)
chr1 (472-505)||(42539418-42539451)
chr1 (473-505)||(9882697-9882729)
chr1 (469-505)||(51866322-51866358)
[»] chr3 (7 HSPs)
chr3 (211-413)||(22931665-22931875)
chr3 (234-417)||(36082705-36082896)
chr3 (472-505)||(1207946-1207979)
chr3 (472-505)||(7867749-7867782)
chr3 (472-505)||(43441672-43441705)
chr3 (472-505)||(45205288-45205321)
chr3 (192-271)||(3079768-3079847)
[»] chr2 (1 HSPs)
chr2 (238-349)||(7468073-7468183)
[»] chr8 (5 HSPs)
chr8 (251-291)||(44912716-44912756)
chr8 (472-505)||(37562179-37562212)
chr8 (470-502)||(37343372-37343404)
chr8 (472-505)||(36497661-36497694)
chr8 (251-283)||(44913707-44913739)
[»] chr4 (8 HSPs)
chr4 (251-291)||(24412977-24413017)
chr4 (472-505)||(41495013-41495046)
chr4 (472-505)||(940297-940330)
chr4 (472-505)||(33093142-33093175)
chr4 (472-505)||(35017153-35017186)
chr4 (472-505)||(47014939-47014972)
chr4 (472-500)||(20056396-20056424)
chr4 (251-291)||(26905357-26905397)
[»] chr5 (3 HSPs)
chr5 (472-505)||(8959160-8959193)
chr5 (472-505)||(14508195-14508228)
chr5 (472-505)||(39788744-39788777)
[»] scaffold0154 (1 HSPs)
scaffold0154 (471-505)||(19729-19763)
[»] chr7 (1 HSPs)
chr7 (471-505)||(37832449-37832483)
[»] scaffold0662 (1 HSPs)
scaffold0662 (472-505)||(1078-1111)
[»] chr6 (4 HSPs)
chr6 (472-505)||(24038182-24038215)
chr6 (472-505)||(27334858-27334891)
chr6 (472-505)||(27395598-27395631)
chr6 (285-342)||(5437834-5437893)


Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 147 - 437
Target Start/End: Complemental strand, 51866692 - 51866402
Alignment:
Q  147 gattgagtgaataatcaaaagagataaggagatgttagttttaacttttaattcaagtttgataagttttaattcaagtttgtttggattaaaacatgtt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51866692 gattgagtgaataatcaaaagagataaggagatgttagttttaacttttaattcaagtttgataagttttaattcaagtttgtttggatcaaaacatgtt 51866593  T
Q  247 tagtagtttgttacaagttagttaggtgatctagctaagtttgtttagattacttactaaacaagcaaagtgaataagtcctatataaggcatgttataa 346  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51866592 tagtagtttgttacaagttagttagatgatctagctaagtttgtttagattacttactaaacaagcaaagtgaataagtcctatataaggcatgttgtaa 51866493  T
Q  347 ctattttcacaatctaatgaaaaagacatagtttacaacaattaatctcttcattcttctctcaattctctcaaaattttataagaaactc 437  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  51866492 ctattttcacaatctaatgaaaaagacatagtttacaacaattattctcttcattcttctctcaattctctcaaaatttcataagaaactc 51866402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 51866847 - 51866806
Alignment:
Q  29 agagtggacattcatttcaatgtcttttggtctgatttaccc 70  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  51866847 agagtggacattcatttcaatgtcttttggtcatatttaccc 51866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 18610773 - 18610806
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  18610773 gagaaatgatatttgtacaactattttgtgacaa 18610806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 42539418 - 42539451
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||| ||||||||||||    
T  42539418 gagaaatgatatttgtacaaccattatgtgacaa 42539451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 505
Target Start/End: Complemental strand, 9882729 - 9882697
Alignment:
Q  473 agaaatgatatttgtacaactattatgtgacaa 505  Q
    |||||||||||||||||||||||| ||||||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaa 9882697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 505
Target Start/End: Complemental strand, 51866358 - 51866322
Alignment:
Q  469 taggagaaatgatatttgtacaactattatgtgacaa 505  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  51866358 taggagaaatgatatttgtacaaccattgtgtgacaa 51866322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 4e-61; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 211 - 413
Target Start/End: Complemental strand, 22931875 - 22931665
Alignment:
Q  211 agttttaattcaagtttgtttggattaaaacatgtttagtagtttgttacaagttagttaggtgatctagctaagtttgtt---------tagattactt 301  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||         |||||| |||    
T  22931875 agttttaattcaagtttgtttggaataaaacatgtttagtagtttgttacaagtgagtcaggtgatgtagctaagtttgttaagtttgtttagattgctt 22931776  T
Q  302 actaaacaagcaaagtgaataagtcctatataaggcatgttataactattttcacaatctaatgaaaaagacatagtttacaacaattaatctcttcatt 401  Q
    ||||| |||||||| ||||||||||||||||||||  |||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||| ||    
T  22931775 actaagcaagcaaattgaataagtcctatataaggagtgttgtaactattttcacaat-taatgaaatacacatagtttacaacaattaatctcttcttt 22931677  T
Q  402 cttctctcaatt 413  Q
    ||||||||||||    
T  22931676 cttctctcaatt 22931665  T

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Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 234 - 417
Target Start/End: Original strand, 36082705 - 36082896
Alignment:
Q  234 attaaaacatgtttagtagtttgttacaagttagttaggtgatctagctaagtttgt--------ttagattacttactaaacaagcaaagtgaataagt 325  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||| |||  || ||||||||||    
T  36082705 attaaaacatggttagtagtttgttacaagttagttaggtgatctagctaagtttgttagtatgattagatttcttactaagcaacaaacgtgaataagt 36082804  T
Q  326 cctatataa--ggcatgttataactattttcacaatctaatgaaaaagacatagtttacaacaattaatctcttcattcttctctcaattctct 417  Q
    | |||||||  || ||||| |||||| ||||| |||| |||| || | |||||| ||||||||| ||||| |||| ||||||||||||||||||    
T  36082805 cttatataaagggaatgttgtaactactttcataatccaatg-aatacacatagcttacaacaa-taatcccttccttcttctctcaattctct 36082896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 1207946 - 1207979
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||||||||||||    
T  1207946 gagaaatgatatttgtacaactattatgtgacaa 1207979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 7867782 - 7867749
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  7867782 gagaaatgatatttgtacaactattttgtgacaa 7867749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 43441672 - 43441705
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||| ||||||||||||    
T  43441672 gagaaatgatatttgtacaaccattatgtgacaa 43441705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 45205288 - 45205321
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  45205288 gagaaatgatatttgtacaactattttgtgacaa 45205321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 3079847 - 3079768
Alignment:
Q  192 ttttaattcaagtttgataagttttaattcaagtttgtttggattaaaacatgtttagta-gtttgttacaagttagttag 271  Q
    |||||||||||||| |||  ||||||| ||||||| |||  || ||||||||| |||| | ||||||||||||||||||||    
T  3079847 ttttaattcaagttagatg-gttttaactcaagttagttaagagtaaaacatggttagaaagtttgttacaagttagttag 3079768  T

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Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 7468183 - 7468073
Alignment:
Q  238 aaacatgtttagtagtttgttacaagttagttaggtgatctagctaagtttgtttagattacttactaaacaagcaaagtgaataagtcctatataaggc 337  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||| ||||  | ||||||||| ||||||||| ||    
T  7468183 aaacatgtttagtagtttgttacaagttagttagatgacctagctaagtttg-ttagattgcttactaagcaagttatgtgaataagccctatataaagc 7468085  T
Q  338 atgttataacta 349  Q
    ||||| ||||||    
T  7468084 atgttgtaacta 7468073  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 44912756 - 44912716
Alignment:
Q  251 agtttgttacaagttagttaggtgatctagctaagtttgtt 291  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  44912756 agtttgttacaagttagttaggtaatctagctaagtttgtt 44912716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 37562212 - 37562179
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||||||||||||    
T  37562212 gagaaatgatatttgtacaactattatgtgacaa 37562179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 502
Target Start/End: Original strand, 37343372 - 37343404
Alignment:
Q  470 aggagaaatgatatttgtacaactattatgtga 502  Q
    |||||||||||||||||||||||||||||||||    
T  37343372 aggagaaatgatatttgtacaactattatgtga 37343404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 36497661 - 36497694
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  36497661 gagaaatgatatttgtacaactattttgtgacaa 36497694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 44913739 - 44913707
Alignment:
Q  251 agtttgttacaagttagttaggtgatctagcta 283  Q
    ||||||||||||||||||||||| |||||||||    
T  44913739 agtttgttacaagttagttaggtaatctagcta 44913707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 24413017 - 24412977
Alignment:
Q  251 agtttgttacaagttagttaggtgatctagctaagtttgtt 291  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  24413017 agtttgttacaagttagttaggtaatctagctaagtttgtt 24412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 41495013 - 41495046
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||||||||||||    
T  41495013 gagaaatgatatttgtacaactattatgtgacaa 41495046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 940330 - 940297
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  940330 gagaaatgatatttgtacaactattttgtgacaa 940297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 33093175 - 33093142
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  33093175 gagaaatgatatttgtacaactattttgtgacaa 33093142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 35017153 - 35017186
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  35017153 gagaaatgatatttgtacaactattttgtgacaa 35017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 47014939 - 47014972
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  47014939 gagaaatgatatttgtacaactattttgtgacaa 47014972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 500
Target Start/End: Original strand, 20056396 - 20056424
Alignment:
Q  472 gagaaatgatatttgtacaactattatgt 500  Q
    |||||||||||||||||||||||||||||    
T  20056396 gagaaatgatatttgtacaactattatgt 20056424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 26905357 - 26905397
Alignment:
Q  251 agtttgttacaagttagttaggtgatctagctaagtttgtt 291  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  26905357 agtttgttacaagttagttagaaaatctagctaagtttgtt 26905397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 8959160 - 8959193
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||||||||||||    
T  8959160 gagaaatgatatttgtacaactattatgtgacaa 8959193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 14508228 - 14508195
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  14508228 gagaaatgatatttgtacaactattttgtgacaa 14508195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Complemental strand, 39788777 - 39788744
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||| ||||||||||||    
T  39788777 gagaaatgatatttgtacaaccattatgtgacaa 39788744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 505
Target Start/End: Complemental strand, 19763 - 19729
Alignment:
Q  471 ggagaaatgatatttgtacaactattatgtgacaa 505  Q
    |||||||||||||||||||||||||| ||||||||    
T  19763 ggagaaatgatatttgtacaactattttgtgacaa 19729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 505
Target Start/End: Original strand, 37832449 - 37832483
Alignment:
Q  471 ggagaaatgatatttgtacaactattatgtgacaa 505  Q
    |||||||||||||||||||||||||| ||||||||    
T  37832449 ggagaaatgatatttgtacaactattttgtgacaa 37832483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 1078 - 1111
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  1078 gagaaatgatatttgtacaactattttgtgacaa 1111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 24038182 - 24038215
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||| ||||||||||||    
T  24038182 gagaaatgatatttgtacaaccattatgtgacaa 24038215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 27334858 - 27334891
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  27334858 gagaaatgatatttgtacaactattttgtgacaa 27334891  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 505
Target Start/End: Original strand, 27395598 - 27395631
Alignment:
Q  472 gagaaatgatatttgtacaactattatgtgacaa 505  Q
    ||||||||||||||||||||||||| ||||||||    
T  27395598 gagaaatgatatttgtacaactattttgtgacaa 27395631  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 5437834 - 5437893
Alignment:
Q  285 gtttgtttagattacttactaaacaagcaaagtgaataag--tcctatataaggcatgtt 342  Q
    ||||||||||||  |||||||| ||||||| |||||||||  || |||||||||||||||    
T  5437834 gtttgtttagatagcttactaagcaagcaatgtgaataagcctcttatataaggcatgtt 5437893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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