View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1149_low_98 (Length: 301)
Name: NF1149_low_98
Description: NF1149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1149_low_98 |
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Alignment Details
Target: chr4 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 30 - 281
Target Start/End: Original strand, 32120767 - 32121018
Alignment:
| Q |
30 |
gatgattcttcaagtgggactaatagagaagttcaatgatattcccatggttacaggccttgatcttgcttgttttgctgcagctctactcacttcctca |
129 |
Q |
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| T |
32120767 |
gatgattcttcaagtgggactaatagagaagttcaatgatattcccatggttacaggccttgatcttgcttgttttgctgcagctctgctcacttcctca |
32120866 |
T |
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| Q |
130 |
gctaccatttttgtcctctctaagcttaatcaacattaaaataattagcatatatggaaatgatattccaaattcatagttttgtcttaaatttatttat |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
32120867 |
gctaccatttttgtcctctctaagcttaatcaacattaaaataattaccatatatggaaatgatattccaaattcatagttttctcttaaatttatttat |
32120966 |
T |
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| Q |
230 |
ttatttatggaacagggtagtagactagtagtatatcttttgtaagccaaaa |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32120967 |
ttatttatggaacagggtagtagactagtagtatatcttttgtaagccaaaa |
32121018 |
T |
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