View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11500_high_38 (Length: 251)
Name: NF11500_high_38
Description: NF11500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11500_high_38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 38324237 - 38324470
Alignment:
| Q |
18 |
gctgttgcggagatcagaaacttgtgtagactggtatgtcttatgaaggacagaaatggacaccaaacacgaattttgagtgcccaacattgttggacac |
117 |
Q |
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| T |
38324237 |
gctgttgcggagatcagaaacttgtgtagactgttatgtcttatgaaggacagaaatggacaccaaacacgaattttgagtgcccaacattgttggacac |
38324336 |
T |
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| Q |
118 |
gccttcagtttaaaatatcggtgttacaagtgttaagaagtgcactcaaatgcagccttggctcccctctgagagagggaaactttgcaggcatcagatt |
217 |
Q |
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|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38324337 |
accttcagtttaaaatatcggtgttacaagtgtaaataagtgcactcaaatgcagccttggctcccctctgagagagggaaactttgcaggcatcagatt |
38324436 |
T |
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| Q |
218 |
aatcacacacttcttctgtatcaatgtaagtttc |
251 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
38324437 |
aatcacacacttcttctgtatcaatgtaagtttc |
38324470 |
T |
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