View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11502_high_1 (Length: 1027)

Name: NF11502_high_1
Description: NF11502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11502_high_1
NF11502_high_1
[»] chr8 (39 HSPs)
chr8 (18-834)||(9625850-9626666)
chr8 (32-337)||(31074442-31074741)
chr8 (48-329)||(28525216-28525493)
chr8 (347-710)||(28524798-28525163)
chr8 (347-714)||(31074031-31074400)
chr8 (32-337)||(28005771-28006058)
chr8 (32-337)||(28063074-28063361)
chr8 (372-752)||(12637520-12637882)
chr8 (834-1017)||(9626692-9626871)
chr8 (343-750)||(28005345-28005733)
chr8 (343-750)||(28062648-28063036)
chr8 (169-348)||(36033106-36033277)
chr8 (509-753)||(31075171-31075414)
chr8 (324-722)||(28006311-28006689)
chr8 (324-722)||(28063614-28063992)
chr8 (518-714)||(24198971-24199164)
chr8 (377-484)||(24199162-24199269)
chr8 (509-612)||(39138544-39138647)
chr8 (325-491)||(28526283-28526443)
chr8 (509-615)||(33314995-33315101)
chr8 (325-493)||(31075023-31075192)
chr8 (511-627)||(45476445-45476561)
chr8 (508-581)||(32898344-32898417)
chr8 (510-624)||(28526425-28526539)
chr8 (635-724)||(5965449-5965538)
chr8 (406-491)||(9625414-9625499)
chr8 (508-593)||(41754127-41754212)
chr8 (509-581)||(32564389-32564461)
chr8 (511-581)||(1952872-1952942)
chr8 (509-575)||(28619432-28619498)
chr8 (510-591)||(41754687-41754768)
chr8 (511-622)||(2552144-2552254)
chr8 (517-581)||(5737013-5737076)
chr8 (546-622)||(36032836-36032912)
chr8 (511-581)||(10407486-10407556)
chr8 (511-581)||(35178707-35178777)
chr8 (607-749)||(35178783-35178925)
chr8 (348-469)||(36032952-36033074)
chr8 (511-597)||(45476317-45476403)
[»] chr2 (55 HSPs)
chr2 (19-506)||(26585693-26586188)
chr2 (342-759)||(38853747-38854165)
chr2 (325-752)||(34582365-34582794)
chr2 (342-623)||(18675213-18675494)
chr2 (29-256)||(14886863-14887088)
chr2 (32-221)||(18675621-18675810)
chr2 (457-753)||(38854787-38855085)
chr2 (371-755)||(12745963-12746328)
chr2 (342-493)||(26585297-26585449)
chr2 (495-712)||(37607141-37607359)
chr2 (546-755)||(14887415-14887625)
chr2 (507-754)||(26585072-26585320)
chr2 (508-714)||(34037552-34037759)
chr2 (244-337)||(18675531-18675624)
chr2 (511-718)||(21733653-21733864)
chr2 (376-484)||(14887282-14887390)
chr2 (372-491)||(14886681-14886799)
chr2 (374-493)||(18676605-18676724)
chr2 (379-486)||(37607347-37607454)
chr2 (342-486)||(38854256-38854401)
chr2 (509-581)||(43380738-43380810)
chr2 (509-695)||(17466709-17466895)
chr2 (509-600)||(31442483-31442574)
chr2 (642-760)||(8420004-8420122)
chr2 (509-615)||(14886594-14886700)
chr2 (642-754)||(32766253-32766365)
chr2 (578-760)||(15441920-15442103)
chr2 (511-581)||(39016285-39016355)
chr2 (509-566)||(21732281-21732338)
chr2 (509-581)||(17330119-17330191)
chr2 (509-581)||(32765088-32765160)
chr2 (517-581)||(33161939-33162003)
chr2 (546-625)||(12003694-12003773)
chr2 (510-581)||(17466212-17466283)
chr2 (509-572)||(31090317-31090380)
chr2 (607-749)||(31091505-31091648)
chr2 (632-755)||(33439237-33439360)
chr2 (406-445)||(38855782-38855821)
chr2 (509-718)||(7412125-7412335)
chr2 (543-605)||(38854594-38854656)
chr2 (550-691)||(38856288-38856430)
chr2 (511-581)||(40000237-40000307)
chr2 (508-581)||(24458211-24458284)
chr2 (19-68)||(34582046-34582095)
chr2 (666-714)||(8420959-8421007)
chr2 (509-581)||(14704156-14704228)
chr2 (546-660)||(31814261-31814376)
chr2 (509-575)||(12396162-12396228)
chr2 (511-581)||(24459356-24459426)
chr2 (510-580)||(31443126-31443196)
chr2 (511-581)||(39015156-39015226)
chr2 (516-577)||(7073805-7073866)
chr2 (546-615)||(12004914-12004983)
chr2 (510-599)||(18676704-18676793)
chr2 (511-580)||(28864693-28864762)
[»] chr7 (45 HSPs)
chr7 (19-337)||(330393-330711)
chr7 (342-614)||(8870115-8870390)
chr7 (344-495)||(25621469-25621621)
chr7 (460-597)||(24287635-24287772)
chr7 (448-655)||(8870846-8871056)
chr7 (546-692)||(27067841-27067988)
chr7 (546-692)||(27210325-27210472)
chr7 (509-695)||(24288746-24288933)
chr7 (495-625)||(30917840-30917969)
chr7 (390-478)||(329990-330078)
chr7 (509-581)||(8048664-8048736)
chr7 (508-700)||(25621597-25621793)
chr7 (607-713)||(30924987-30925093)
chr7 (371-695)||(8879284-8879610)
chr7 (511-581)||(42477531-42477601)
chr7 (342-485)||(8878767-8878908)
chr7 (535-623)||(22621256-22621344)
chr7 (637-753)||(48646047-48646163)
chr7 (511-581)||(7258426-7258496)
chr7 (509-579)||(32793344-32793414)
chr7 (511-581)||(48647345-48647415)
chr7 (511-581)||(48788574-48788644)
chr7 (509-574)||(2677094-2677159)
chr7 (666-755)||(24934800-24934889)
chr7 (642-754)||(7258272-7258384)
chr7 (509-581)||(7259585-7259656)
chr7 (509-581)||(33607394-33607466)
chr7 (525-605)||(39824276-39824356)
chr7 (509-581)||(43461617-43461689)
chr7 (509-755)||(12223579-12223826)
chr7 (681-756)||(21062812-21062887)
chr7 (644-726)||(7509487-7509569)
chr7 (509-575)||(8375503-8375569)
chr7 (642-760)||(10899087-10899205)
chr7 (511-581)||(35728988-35729058)
chr7 (511-581)||(44333288-44333358)
chr7 (517-578)||(10894497-10894558)
chr7 (511-575)||(24934954-24935018)
chr7 (545-660)||(34888839-34888955)
chr7 (509-581)||(44334350-44334422)
chr7 (509-580)||(385529-385600)
chr7 (545-580)||(2677720-2677755)
chr7 (509-560)||(44530517-44530568)
chr7 (511-581)||(10898975-10899045)
chr7 (657-762)||(385640-385745)
[»] chr4 (30 HSPs)
chr4 (32-348)||(24745440-24745761)
chr4 (323-705)||(21621869-21622253)
chr4 (325-611)||(24745770-24746057)
chr4 (164-335)||(24753077-24753248)
chr4 (492-718)||(21622980-21623207)
chr4 (48-180)||(24752933-24753065)
chr4 (550-695)||(32244609-32244755)
chr4 (510-714)||(2786258-2786465)
chr4 (495-693)||(32244332-32244531)
chr4 (325-623)||(24753270-24753555)
chr4 (509-599)||(6039274-6039364)
chr4 (510-578)||(42391787-42391855)
chr4 (509-581)||(19050407-19050479)
chr4 (642-757)||(53771063-53771178)
chr4 (511-581)||(20599788-20599858)
chr4 (509-581)||(42278200-42278272)
chr4 (511-714)||(26172822-26173028)
chr4 (398-492)||(2786467-2786561)
chr4 (511-660)||(39869011-39869161)
chr4 (511-581)||(47878386-47878456)
chr4 (680-749)||(11269892-11269961)
chr4 (508-580)||(4701935-4702007)
chr4 (550-580)||(25810354-25810384)
chr4 (573-615)||(26170777-26170819)
chr4 (757-811)||(38393929-38393983)
chr4 (343-445)||(21622855-21622955)
chr4 (778-819)||(25155899-25155940)
chr4 (605-719)||(25810389-25810504)
chr4 (331-383)||(42278368-42278421)
chr4 (755-832)||(49354306-49354383)
[»] chr5 (37 HSPs)
chr5 (89-455)||(23772931-23773298)
chr5 (102-328)||(28864741-28864969)
chr5 (347-623)||(35538023-35538295)
chr5 (342-622)||(28865015-28865291)
chr5 (347-506)||(23773301-23773461)
chr5 (546-625)||(32555463-32555542)
chr5 (525-749)||(9537945-9538170)
chr5 (509-625)||(34173387-34173503)
chr5 (509-597)||(13651041-13651134)
chr5 (625-754)||(16611725-16611854)
chr5 (511-580)||(37072730-37072799)
chr5 (509-581)||(2464820-2464892)
chr5 (509-580)||(578652-578723)
chr5 (511-581)||(8075735-8075805)
chr5 (510-608)||(19271679-19271777)
chr5 (546-691)||(30970502-30970648)
chr5 (32-104)||(28864632-28864704)
chr5 (518-581)||(28591022-28591085)
chr5 (511-581)||(8074601-8074671)
chr5 (511-581)||(14891049-14891119)
chr5 (511-581)||(25590581-25590651)
chr5 (511-581)||(40611411-40611481)
chr5 (511-581)||(40612561-40612631)
chr5 (668-753)||(18400188-18400273)
chr5 (516-625)||(19271469-19271578)
chr5 (762-831)||(40383705-40383773)
chr5 (632-744)||(544657-544767)
chr5 (509-565)||(16611875-16611931)
chr5 (534-577)||(18400353-18400396)
chr5 (546-597)||(21069444-21069495)
chr5 (569-600)||(23773477-23773508)
chr5 (511-581)||(545938-546008)
chr5 (511-581)||(4593012-4593081)
chr5 (511-581)||(14889920-14889990)
chr5 (509-567)||(31946933-31946991)
chr5 (511-577)||(32640443-32640509)
chr5 (508-589)||(19183104-19183185)
[»] chr1 (37 HSPs)
chr1 (80-321)||(44719809-44720050)
chr1 (19-348)||(11060037-11060364)
chr1 (374-712)||(50106948-50107287)
chr1 (46-337)||(1408075-1408369)
chr1 (342-716)||(1407675-1408038)
chr1 (342-753)||(8975157-8975550)
chr1 (325-754)||(11060496-11060910)
chr1 (372-753)||(44719348-44719730)
chr1 (112-205)||(36395702-36395795)
chr1 (508-756)||(22856675-22856922)
chr1 (509-704)||(25037925-25038124)
chr1 (509-704)||(25043137-25043336)
chr1 (375-609)||(11059759-11059977)
chr1 (568-656)||(33342511-33342600)
chr1 (510-680)||(44720728-44720901)
chr1 (509-749)||(3117651-3117892)
chr1 (495-615)||(29766060-29766180)
chr1 (546-660)||(22857496-22857611)
chr1 (509-595)||(6612567-6612653)
chr1 (518-691)||(39725399-39725573)
chr1 (509-581)||(51450171-51450243)
chr1 (509-581)||(7944306-7944378)
chr1 (509-580)||(16249815-16249886)
chr1 (546-756)||(39726603-39726814)
chr1 (642-760)||(7945568-7945686)
chr1 (523-581)||(9340939-9340997)
chr1 (524-581)||(32665685-32665742)
chr1 (642-718)||(1001187-1001263)
chr1 (509-577)||(1001326-1001394)
chr1 (509-581)||(9339797-9339869)
chr1 (508-591)||(534427-534510)
chr1 (509-595)||(6613867-6613953)
chr1 (511-581)||(7945456-7945526)
chr1 (683-749)||(10332988-10333054)
chr1 (546-580)||(11830061-11830095)
chr1 (625-714)||(5782451-5782540)
chr1 (767-832)||(26042563-26042628)
[»] chr6 (12 HSPs)
chr6 (19-268)||(33986795-33987044)
chr6 (35-192)||(11074555-11074701)
chr6 (527-718)||(24621110-24621302)
chr6 (508-593)||(30748149-30748234)
chr6 (379-470)||(11676211-11676302)
chr6 (757-828)||(12323906-12323977)
chr6 (509-615)||(19600125-19600230)
chr6 (550-615)||(5265335-5265400)
chr6 (652-753)||(3778818-3778919)
chr6 (511-580)||(12676373-12676442)
chr6 (644-757)||(31218949-31219062)
chr6 (530-571)||(31219101-31219142)
[»] chr3 (34 HSPs)
chr3 (509-710)||(36827355-36827557)
chr3 (386-493)||(29188185-29188292)
chr3 (511-575)||(47428485-47428549)
chr3 (625-755)||(19114529-19114659)
chr3 (509-575)||(19115067-19115133)
chr3 (509-575)||(33427888-33427954)
chr3 (511-581)||(55389371-55389441)
chr3 (509-739)||(612226-612457)
chr3 (510-581)||(2591776-2591847)
chr3 (546-625)||(3671165-3671244)
chr3 (517-714)||(40205918-40206117)
chr3 (377-469)||(45259566-45259658)
chr3 (509-581)||(36279103-36279175)
chr3 (509-581)||(48574359-48574431)
chr3 (509-581)||(53957824-53957896)
chr3 (509-580)||(55388211-55388282)
chr3 (509-575)||(19114670-19114736)
chr3 (509-575)||(47117972-47118037)
chr3 (511-581)||(48808523-48808593)
chr3 (524-581)||(17700670-17700727)
chr3 (754-818)||(31612247-31612311)
chr3 (642-758)||(36278945-36279061)
chr3 (508-615)||(3694019-3694126)
chr3 (642-749)||(19115161-19115267)
chr3 (651-718)||(39497240-39497307)
chr3 (511-570)||(45599046-45599105)
chr3 (642-749)||(48572987-48573094)
chr3 (642-749)||(55389483-55389590)
chr3 (780-838)||(31612031-31612089)
chr3 (680-754)||(33428487-33428561)
chr3 (511-581)||(36280219-36280289)
chr3 (511-581)||(48573136-48573206)
chr3 (511-581)||(48809557-48809627)
chr3 (680-749)||(34263807-34263876)
[»] scaffold0009 (1 HSPs)
scaffold0009 (344-487)||(142485-142628)
[»] scaffold0767 (1 HSPs)
scaffold0767 (508-580)||(5769-5841)
[»] scaffold0034 (1 HSPs)
scaffold0034 (642-714)||(116092-116164)


Alignment Details
Target: chr8 (Bit Score: 697; Significance: 0; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 697; E-Value: 0
Query Start/End: Original strand, 18 - 834
Target Start/End: Original strand, 9625850 - 9626666
Alignment:
Q  18 taatcatatagcagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaa 117  Q
    ||||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9625850 taatcatattgcataaatgcaaatgctcagataaatatactaagacaatattggtaaacaaccaattgaagtttagttgaatatgtattcttaaagctaa 9625949  T
Q  118 taatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9625950 taatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttg 9626049  T
Q  218 gaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactt 317  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9626050 aaaaaatgtgattcataaccatacctgaaagcctgaaacgattcttcatattgctagaatttataaattgatataaaataggattatagtaggcctactt 9626149  T
Q  318 tgtgcctgtaagggtttactatttgggacctaactgatagtaactatgctcagcagggacctaacaacaagtctcccacaaccacattacaacttcattg 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9626150 tgtgcctgtaagggtttactatttgggacctaactgatagtaactatgttcagcagggacctaacaacaagtctcccacaaccacattacaacttcattg 9626249  T
Q  418 agaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaa 517  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  9626250 agaaagatgacttagttcttgacgaagagaaacacttccttgggacgagtttaaggatattgattttcgggtcaggaatattgattttcaaggatattaa 9626349  T
Q  518 ttttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcgg 617  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9626350 ttttcggttcagggattaaagtggtcaatttctactttcactttagttcatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcgg 9626449  T
Q  618 ttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacg 717  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||| ||| ||||| ||    
T  9626450 ttaacatattatttaacgtcagaaactaaagtaataacggaagcgcatattcaatgactacattgtatttaattctgagtcaatgacatttatgacagcg 9626549  T
Q  718 aagtgtatagttaggaaccaaagtgaccatttactcaatttttatgtctaaataaaaagatacacacttattaactttgaccttaatatttttaggttgg 817  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||     
T  9626550 aagtgtatagttagggaccaaagtgaccatttacttaatttttatgtctaaataaaaagatacacacttattaacttaaaccttaatgtttttaggttga 9626649  T
Q  818 tccaagttaacaaccgt 834  Q
    |||||||||||||||||    
T  9626650 tccaagttaacaaccgt 9626666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 32 - 337
Target Start/End: Complemental strand, 31074741 - 31074442
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaa 131  Q
    |||||||||||||  ||||||||||||| ||||||| | ||||| || ||||| |||||||||||||||||||||||| ||||||||||| |||||||||    
T  31074741 aaatgcacatgcttagataaatatactaggacaatagttgtaaataatcaattcaagtttagttgaatatgtattcttgaagctaataatctttcttaaa 31074642  T
Q  132 aaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattc 231  Q
    ||| |||||| ||||||||||||||||| |  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  31074641 aaacgaaacagtataatttgaagttaacgtcgagattataaagaagaaaccatgaaggaattcaagatatacaaatacaaaatttgggaaaatgtgattc 31074542  T
Q  232 ataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaaggg 331  Q
    ||||||| | ||||   | | | |  || ||  || |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| |    
T  31074541 ataaccagacctga---cataagatcatact--at-ttgctagaattgataaattgatataaaataggatcatagtaggcctattttgtgtctgtaagtg 31074448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 48 - 329
Target Start/End: Complemental strand, 28525493 - 28525216
Alignment:
Q  48 ataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaaaaa-tgaaacaatata 146  Q
    ||||||||| || ||||||||| ||||| || |||||||| ||||||||||||||||||||| || |||||||| |||||||||||| ||||| | ||||    
T  28525493 ataaatatattaggacaatatttgtaaataatcaattgaaatttagttgaatatgtattcttgaaactaataatctttcttaaaaaaatgaaatagtata 28525394  T
Q  147 atttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattcataaccatatctgaa 246  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    ||||| |||||| |||||||||||||||||| | | |||||    
T  28525393 atttgaagttaacattaagattaaaaagaagaaactatgaaggaattcaatatat----atacagaatttgcaaaaatgtgattcataactagacctgaa 28525298  T
Q  247 agcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaag 329  Q
    | |||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||| |||||||    
T  28525297 aacctgaaacaattcttcatattgctagaatt-ataaattgatctaaaataggatcatagtaggcctagtttgtgtctgtaag 28525216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 347 - 710
Target Start/End: Complemental strand, 28525163 - 28524798
Alignment:
Q  347 ctaactgatagtaactatgctcagc-agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaaga 445  Q
    |||||||||||||| ||||| |||  || ||||||||||||| ||| || || |||||  |||||||||||||| |||||||| || || || | |||||    
T  28525163 ctaactgatagtaagtatgcacagttagagacctaacaacaaatcttccgcagccacaagacaacttcattgaggaagatgacccaattattaaagaaga 28525064  T
Q  446 gaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaa 545  Q
    | |||||||| ||||||||||||| ||||||||||||||| ||||||| ||| |||||||   ||||||| |||||||||||| |||| ||| ||   |     
T  28525063 gcaacacttcgttgggacgagtttggggatattgattttcagttcagggataatgatttt-tgggatattgattttcggttcacggaccaaaatgacaat 28524965  T
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaact 644  Q
    ||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||  |||| ||||||||| |||||| | |||||| || |||||| |||    
T  28524964 tttttactttcactttagtccatctgacacttcatactctttgtcaacataaaatctttgccacatcatcagttaacaaaattatttaacgtcagagact 28524865  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaag-gacctttgt 710  Q
    ||| | |||||||||| ||| |||||  || ||| |||||||||||||||| ||||| |||||||||    
T  28524864 aaaatgataacggaagtgcacattcaaggattactttgtatttaatcctgagtcaagagacctttgt 28524798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 347 - 714
Target Start/End: Complemental strand, 31074400 - 31074031
Alignment:
Q  347 ctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaaga 445  Q
    |||||||||||||| |||||  || ||||||||||||| ||| |||| |||||||| |  |||||||||| ||| ||||||||  |||| ||||||||||    
T  31074400 ctaactgatagtaagtatgcatagtcagggacctaacatcaaatctcacacaaccatagaacaacttcatcgaggaagatgacctagttcttgacgaaga 31074301  T
Q  446 gaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaa 545  Q
    | |||| ||| ||||||||||||| ||||||||||||||||||||| | |||||| ||| ||  |||| | |||||| | |||||||| |||||| |||     
T  31074300 gcaacatttcgttgggacgagtttggggatattgattttcggttcatggatattgttttccagtgataatgattttcaggtcagggaccaaagtgatcat 31074201  T
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaact 644  Q
    |||||| ||||||||||||||  |||||||||||||| | |||| |||||||||| |||| ||||||||| |||||| | |||||| |||  |||| |||    
T  31074200 tttctattttcactttagtccccgtgacacctcataccccttgttagcataaaacatttgccacatcatcagttaacaaaattatttaattccagagact 31074101  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgaca 714  Q
    ||||| ||||| |||| ||| ||||||  ||||| ||| ||||||||| || |||  ||| |||||||||    
T  31074100 aaagtgataacagaagtgcacattcagaaactactttgcatttaatccagagtcagagacttttgtgaca 31074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 32 - 337
Target Start/End: Complemental strand, 28006058 - 28005771
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaa 131  Q
    |||| |||||||||  |||||||||  | ||||||||| ||||| || ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  28006058 aaatccacatgctcatataaatatatcaggacaatatttgtaaataatcaattgaagtttagttgaatatgtatttttgaagctaataatctttcttaaa 28005959  T
Q  132 aaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattc 231  Q
    |||| ||| | |||||||||||                  |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  28005958 aaataaaatagtataatttgaa------------------aagaagaaaccatgaaggaattcaagatatacaaatacataatttgggaaaatgtgattc 28005877  T
Q  232 ataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaaggg 331  Q
    ||||| | |  | |||||||||||| |||||||||||| |||||||||||||||| ||||| |||||||| ||| ||||||||||||||| | ||||| |    
T  28005876 ataactagacttaaaagcctgaaacaattcttcatattactagaattgataaattaatatataataggatcataataggcctactttgtgtcggtaagtg 28005777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 32 - 337
Target Start/End: Complemental strand, 28063361 - 28063074
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaa 131  Q
    |||| |||||||||  |||||||||  | ||||||||| ||||| || ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  28063361 aaatccacatgctcatataaatatatcaggacaatatttgtaaataatcaattgaagtttagttgaatatgtatttttgaagctaataatctttcttaaa 28063262  T
Q  132 aaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattc 231  Q
    |||| ||| | |||||||||||                  |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  28063261 aaataaaatagtataatttgaa------------------aagaagaaaccatgaaggaattcaagatatacaaatacataatttgggaaaatgtgattc 28063180  T
Q  232 ataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaaggg 331  Q
    ||||| | |  | |||||||||||| |||||||||||| |||||||||||||||| ||||| |||||||| ||| ||||||||||||||| | ||||| |    
T  28063179 ataactagacttaaaagcctgaaacaattcttcatattactagaattgataaattaatatataataggatcataataggcctactttgtgtcggtaagtg 28063080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 372 - 752
Target Start/End: Original strand, 12637520 - 12637882
Alignment:
Q  372 agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttag 471  Q
    ||||||| ||| |||||||||| |||||||||| ||| |||||||||| || |||||  |||||||||||||||| |||||||| |||| ||||||||||    
T  12637520 agggaccgaacgacaagtctcctacaaccacataacatcttcattgaggaacatgaccaagtttttgacgaagagcaacacttcgttggaacgagtttag 12637619  T
Q  472 ggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtg 571  Q
    |||||||||||||| ||| |||  || |||||||||                |||||||||| |||||| |||  |||||||||||||||||||||||||    
T  12637620 ggatattgattttcagtttagggttaatgattttca----------------gttcagggaccaaagtgatcatattctactttcactttagtccatgtg 12637703  T
Q  572 acacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcag 671  Q
    |||| |||||||| |||| || ||||||| |||| ||||||||| |||   | | |||| |||||| |  |||||||| |||||||||| ||| ||||||    
T  12637704 acacatcatactccttgttagtataaaacctttgccacatcatcagtt--gaaaatatttaatgtcggggactaaagtgataacggaagtgcacattcag 12637801  T
Q  672 tgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttact 752  Q
      ||||| ||||||| |||||||| | | ||||||||||  |||||||||||||||| | | ||||| |||||||||||||    
T  12637802 gaactactttgtattcaatcctgagttagggacctttgttgcaacgaagtgtatagtcaaggaccaaggtgaccatttact 12637882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 834 - 1017
Target Start/End: Original strand, 9626692 - 9626871
Alignment:
Q  834 tatatatacatatcatgtatatcatgtcttgtatgaaattattccaatggtcacaccacttataatgtggtccgctttcatcaaactgtctctcctgcca 933  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  9626692 tatatatatatat-atatatatcatgtcttgtatgaaattattccaatggtcac--cacttataatgtggtccgctttcatcaaactgtctgtcctgcca 9626788  T
Q  934 acatccctttgcggataccattattggggtatcnnnnnnnnnnngaaagaattattattggggtatctattctgtcctgttcat 1017  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| || ||||||||||    
T  9626789 acatccctttgcggataccattattggggtatc-ttttttttttgaaagaattattattggggtatctatcctctcctgttcat 9626871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 343 - 750
Target Start/End: Complemental strand, 28005733 - 28005345
Alignment:
Q  343 ggacctaactgatagtaactatgctcagc-agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacg 441  Q
    ||||||||||||| |||| ||||| |||  |||||||||| | |||||||||| ||||||||| |||||||||||||| ||||||||| |||| ||||||    
T  28005733 ggacctaactgattgtaagtatgcacagttagggacctaaaagcaagtctcccgcaaccacataacaacttcattgaggaagatgacttagttcttgacg 28005634  T
Q  442 aagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtgg 541  Q
    ||||| |||||||| |||| |||||||| ||||||                     |||||||||   |||||||||||| ||||||||||| |||||||    
T  28005633 aagaggaacacttcgttggaacgagtttggggata---------------------ttgattttcggagatattaatttttggttcagggaccaaagtgg 28005555  T
Q  542 tcaatttct-actttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcag 639  Q
    | ||||| | |||||||||||||||| | |||||||| ||||||||||| || |||||||||||| |||||||||  || |||| |||||| ||  || |    
T  28005554 taaattttttactttcactttagtccttatgacaccttatactctttgttagtataaaacttttgccacatcatcaattcacataattatttaacatcgg 28005455  T
Q  640 aaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaa 739  Q
    | |||||||| ||| |  ||| ||| |||| | |||||| |||||||| ||||||| ||| ||| |||||||||||||| ||||| ||| ||| ||| ||    
T  28005454 agactaaagtgatatcataagagcacattcggggactactttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggacc-aa 28005356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 343 - 750
Target Start/End: Complemental strand, 28063036 - 28062648
Alignment:
Q  343 ggacctaactgatagtaactatgctcagc-agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacg 441  Q
    ||||||||||||| |||| ||||| |||  |||||||||| | |||||||||| ||||||||| |||||||||||||| ||||||||| |||| ||||||    
T  28063036 ggacctaactgattgtaagtatgcacagttagggacctaaaagcaagtctcccgcaaccacataacaacttcattgaggaagatgacttagttcttgacg 28062937  T
Q  442 aagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtgg 541  Q
    ||||| |||||||| |||| |||||||| ||||||                     |||||||||   |||||||||||| ||||||||||| |||||||    
T  28062936 aagaggaacacttcgttggaacgagtttggggata---------------------ttgattttcggagatattaatttttggttcagggaccaaagtgg 28062858  T
Q  542 tcaatttct-actttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcag 639  Q
    | ||||| | |||||||||||||||| | |||||||| ||||||||||| || |||||||||||| |||||||||  || |||| |||||| ||  || |    
T  28062857 taaattttttactttcactttagtccttatgacaccttatactctttgttagtataaaacttttgccacatcatcaattcacataattatttaacatcgg 28062758  T
Q  640 aaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaa 739  Q
    | |||||||| ||| |  ||| ||| |||| | |||||| |||||||| ||||||| ||| ||| |||||||||||||| ||||| ||| ||| ||| ||    
T  28062757 agactaaagtgatatcataagagcacattcggggactactttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggacc-aa 28062659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 169 - 348
Target Start/End: Complemental strand, 36033277 - 36033106
Alignment:
Q  169 aaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatat 268  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||| | |||||||| |||||| |||||||||||    
T  36033277 aaaaagaagaaaccatgaaggaattcaagatatacaaatacataatttgagaaaatgtgattcataaccagacctgaaagcttgaaacaattcttcatat 36033178  T
Q  269 tgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaagggtttactatttgggacct 348  Q
    ||||||||||        |||||||||||  || |||||||||||| ||||||| |||||| ||||||| || |||||||    
T  36033177 tgctagaatt--------gatataaaatataatcatagtaggcctattttgtgcttgtaagtgtttactgttagggacct 36033106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 509 - 753
Target Start/End: Original strand, 31075171 - 31075414
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| |||||| |||||||||| ||||||  || |||||||||||| |||||||| ||||||||||| ||||| |||||| |||||||| |||||||    
T  31075171 ggatattgattttcagttcagggaccaaagtgaccactttctactttca-tttagtccttgtgacacctcgtactccttgtcaccataaaacctttgtca 31075269  T
Q  609 catcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    | ||||| ||||| || |||||| || |||||  |||||||| ||||||| ||  ||||||||| |||||  ||||||||||| ||||  |||| |||||    
T  31075270 cgtcatcagttaatataattatttaacgtcagtgactaaagtgataacgggagtacatattcag-gactattttgtatttaatgctgagccaagaacctt 31075368  T
Q  708 tgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactc 753  Q
    ||| ||||||| ||| | ||| ||  |||||| |||||||||||||    
T  31075369 tgtaacaacgaggtgcagagtcagagaccaaattgaccatttactc 31075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 324 - 722
Target Start/End: Original strand, 28006311 - 28006689
Alignment:
Q  324 tgtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaa 422  Q
    |||||| ||||||| |  ||||||||||||||||||| ||||| ||  |||||||||||||  ||||||| | ||||||||| |||||||  ||||| ||    
T  28006311 tgtaagtgtttactgtcagggacctaactgatagtaagtatgcacaatcagggacctaacagaaagtctctcgcaaccacataacaactttgttgaggaa 28006410  T
Q  423 gatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttc 522  Q
    |||||| ||||| |||| |||||| ||| |||| |||||||||||||  ||||||||||||| ||                     ||||||| |||||     
T  28006411 gatgacccagttcttgaagaagagcaactcttcattgggacgagtttgaggatattgatttttgg---------------------ggatattgattttt 28006489  T
Q  523 ggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac 622  Q
     |||||| ||| ||||||  || |||||| |||||||||||||| ||||| || ||||||||  ||||||||| |||||||||||| |||||| ||||||    
T  28006490 agttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcat-aaacttttgtcatatcatcagttaac 28006588  T
Q  623 a-tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagt 721  Q
    |  |||||| || |||||    |||||| ||||||||||  || |||||  |||||| || |||||||| |||||||| | |||||||  ||| ||||||    
T  28006589 agaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaattctgattcaggaacctttgcaacatcgaagt 28006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 324 - 722
Target Start/End: Original strand, 28063614 - 28063992
Alignment:
Q  324 tgtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaa 422  Q
    |||||| ||||||| |  ||||||||||||||||||| ||||| ||  |||||||||||||  ||||||| | ||||||||| |||||||  ||||| ||    
T  28063614 tgtaagtgtttactgtcagggacctaactgatagtaagtatgcacaatcagggacctaacagaaagtctctcgcaaccacataacaactttgttgaggaa 28063713  T
Q  423 gatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttc 522  Q
    |||||| ||||| |||| |||||| ||| |||| |||||||||||||  ||||||||||||| ||                     ||||||| |||||     
T  28063714 gatgacccagttcttgaagaagagcaactcttcattgggacgagtttgaggatattgatttttgg---------------------ggatattgattttt 28063792  T
Q  523 ggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac 622  Q
     |||||| ||| ||||||  || |||||| |||||||||||||| ||||| || ||||||||  ||||||||| |||||||||||| |||||| ||||||    
T  28063793 agttcagtgaccaaagtgaccactttctattttcactttagtccttgtgatacatcatactccctgtcagcat-aaacttttgtcatatcatcagttaac 28063891  T
Q  623 a-tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagt 721  Q
    |  |||||| || |||||    |||||| ||||||||||  || |||||  |||||| || |||||||| |||||||| | |||||||  ||| ||||||    
T  28063892 agaattatttaacgtcaggggttaaagtgataacggaagtacacattcaaggactactttatatttaattctgattcaggaacctttgcaacatcgaagt 28063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 518 - 714
Target Start/End: Complemental strand, 24199164 - 24198971
Alignment:
Q  518 ttttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcgg 617  Q
    |||||| ||||||||| ||| || ||| ||| |||||||||||||||   ||||||||||||||| | ||||||||||||||| ||||  || |||||      
T  24199164 ttttcgattcagggaccaaaatgatcattttttactttcactttagtatctgtgacacctcataccccttgtcagcataaaacatttgctacgtcatc-- 24199067  T
Q  618 ttaacata-ttattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgaca 714  Q
      |||||| |||||||| |  | | |||||||| |||||||||| ||| ||||| ||| ||| |||||||||||||||| |||| |||||||||||||    
T  24199066 --aacataattattcaacgaaaaagactaaagtgataacggaagtgcacattcaatgattactttgtatttaatcctgaatcaaagacctttgtgaca 24198971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 377 - 484
Target Start/End: Complemental strand, 24199269 - 24199162
Alignment:
Q  377 cctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggata 476  Q
    ||||||||||| |||||| |||||||||  ||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| || |||| ||||||    
T  24199269 cctaacaacaattctcccgcaaccacataccaacttcattgaggaagatgacccagttcttgacgaagagcaacacttcgttggggcgggtttggggata 24199170  T
Q  477 ttgatttt 484  Q
    ||||||||    
T  24199169 ttgatttt 24199162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 509 - 612
Target Start/End: Original strand, 39138544 - 39138647
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||||||| || | |  ||||||  || ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  39138544 ggatattgattttcggtacaagaatcaaagtgaccattttctactttcactttagtccttgtgacacctcatacactttgtcagcataaaacttttgtca 39138643  T
Q  609 catc 612  Q
    ||||    
T  39138644 catc 39138647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 325 - 491
Target Start/End: Original strand, 28526283 - 28526443
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaa--gtctcccacaaccacattacaacttcattgagaa 421  Q
    ||||| ||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||| |||  ||||||| ||||||||| |||||        | |    
T  28526283 gtaagtgtttactgtcagggacctaactgatagtaagtatgcacagtcagggacctaacatcaaaagtctcccgcaaccacataacaac--------gga 28526374  T
Q  422 agatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttca 491  Q
    ||||||||||||| ||||||||||| |||||||| ||| ||||||||| | |||||||||||||||||||    
T  28526375 agatgactcagttcttgacgaagagcaacacttcgttgagacgagttt-gagatattgattttcggttca 28526443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 509 - 615
Target Start/End: Complemental strand, 33315101 - 33314995
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||||||||||  |||| |||| ||||||   | |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| | |||||    
T  33315101 ggatattaattttcaattcacggaccaaagtgactattttctactttcactttggtccatgtgacacctcatactccttgtcagcaaaaaacatgtgtca 33315002  T
Q  609 catcatc 615  Q
    | |||||    
T  33315001 cttcatc 33314995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 325 - 493
Target Start/End: Original strand, 31075023 - 31075192
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgc-tcagcagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaag 423  Q
    ||||| |||||||||  ||||||||||||||||||| ||||| | | |||  | |||| |||||||||||| | ||| ||   || || ||||||| ||     
T  31075023 gtaagtgtttactatcagggacctaactgatagtaagtatgcataatcagatatctaaaaacaagtctcccgccaccgcagagcagctccattgaggaac 31075122  T
Q  424 atgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcagg 493  Q
    ||| | ||||| ||||||||||  || ||||| ||||||||||||| ||||||||||||||| |||||||    
T  31075123 atggcccagttcttgacgaagatcaatacttcgttgggacgagttttgggatattgattttcagttcagg 31075192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 511 - 627
Target Start/End: Original strand, 45476445 - 45476561
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcaca 610  Q
    ||||| ||||| ||||||||||||||||||  || |||||||||| ||||| |||||| |||||| |||||||  |||||||||||| || |  | ||||    
T  45476445 atattgatttttggttcagggactaaagtgaccattttctacttttactttggtccatatgacacatcatacttcttgtcagcataagacatgcgccaca 45476544  T
Q  611 tcatcggttaacatatt 627  Q
    |||||  ||||||||||    
T  45476545 tcatcacttaacatatt 45476561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 508 - 581
Target Start/End: Original strand, 32898344 - 32898417
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  32898344 aggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32898417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 510 - 624
Target Start/End: Original strand, 28526425 - 28526539
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcac 609  Q
    |||||| |||||||||||| | || ||| || ||| |||||| |||||||||||||  | |||||||||||| || |||||| |||||| | ||||||||    
T  28526425 gatattgattttcggttcaagaaccaaaatgatcattttctattttcactttagtcactatgacacctcatattccttgtcaccataaatcctttgtcac 28526524  T
Q  610 atcatcggttaacat 624  Q
     ||||  ||||||||    
T  28526525 ttcataagttaacat 28526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 635 - 724
Target Start/End: Original strand, 5965449 - 5965538
Alignment:
Q  635 gtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgta 724  Q
    |||||| |||||||| |||||||||| ||| | |||  |||| | |||||||||||||||| ||| |||| ||||||||||||| |||||    
T  5965449 gtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggacatttgtgacaacgaggtgta 5965538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 491
Target Start/End: Complemental strand, 9625499 - 9625414
Alignment:
Q  406 acaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttca 491  Q
    |||||||||||||| |||||| | || || | || |||||| |||||||| |||||||||||||  ||||||||||||||| ||||    
T  9625499 acaacttcattgaggaagatggcccaattctagatgaagagcaacacttcattgggacgagtttgaggatattgattttcgattca 9625414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 508 - 593
Target Start/End: Complemental strand, 41754212 - 41754127
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagc 593  Q
    |||||||| ||||||| ||||||||| ||||||   | ||| ||||||||||||||||| | |||||| |||||||| ||||||||    
T  41754212 aggatattgattttcgattcagggaccaaagtgactattttttactttcactttagtccctatgacacgtcatactccttgtcagc 41754127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 32564389 - 32564461
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| |||  |||||||||| || ||| |||||||| ||||||||||||||||||||| |||||    
T  32564389 ggatattcatttttggtcaagggactaaaatgatcattttctactatcactttagtccatgtgacacatcata 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 1952872 - 1952942
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| | ||||||||||||    
T  1952872 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 1952942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 28619432 - 28619498
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| |||||| ||| ||||||| ||| |||||||||||  |||||||||||||||||    
T  28619432 ggatattgatttttggttcatggattaaagtgatcattttctactttcgatttagtccatgtgacac 28619498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 510 - 591
Target Start/End: Original strand, 41754687 - 41754768
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtca 591  Q
    |||||| ||||||| |||| |||| ||||||  || ||| ||||||||||||| ||| |||||||| |||||||| ||||||    
T  41754687 gatattgattttcgattcatggaccaaagtgaccattttttactttcactttaatccctgtgacacatcatactccttgtca 41754768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 511 - 622
Target Start/End: Complemental strand, 2552254 - 2552144
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat-actctttgtcagcataaaacttttgtcac 609  Q
    ||||| |||||||||||||  || ||||||   | ||||||||||||||||||||| ||||||||||||| | || |||| |||| ||||| ||||||||    
T  2552254 atattgattttcggttcagaaaccaaagtgacaattttctactttcactttagtcc-tgtgacacctcatgaatc-ttgttagcacaaaacatttgtcac 2552157  T
Q  610 atcatcggttaac 622  Q
     |||| |||||||    
T  2552156 ctcattggttaac 2552144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 517 - 581
Target Start/End: Complemental strand, 5737076 - 5737013
Alignment:
Q  517 attttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| || |||||||| |||||| | |||||||||||| |||||||||| ||||||||||||||    
T  5737076 atttttggatcagggaccaaagtgat-aatttctacttttactttagtccttgtgacacctcata 5737013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 622
Target Start/End: Complemental strand, 36032912 - 36032836
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac 622  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||   |||||||  |||||||| ||||| ||||||    
T  36032912 tttctactttcactttcgtccctgtgacacctcataccccttgttgacataaaatatttgtcacgtcatcagttaac 36032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 10407486 - 10407556
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||| |||||||||   || |||||||||||||||| |||| | ||||||||||||    
T  10407486 atattgatttttggttcagagactaaagtaaccattttctactttcactttggtccttatgacacctcata 10407556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 35178707 - 35178777
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||| | |||||| ||| |||||| ||||||||| |||| | ||||||||||||    
T  35178707 atattgatttttggttcaggggccaaagtgatcattttctagtttcactttggtccctatgacacctcata 35178777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 607 - 749
Target Start/End: Original strand, 35178783 - 35178925
Alignment:
Q  607 cacatcatcggttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacct 706  Q
    |||||||||  |||||| ||| || || |||||  |||||||| |||||||||| ||| | |||| ||||   |||||||||||||||| ||| |||||     
T  35178783 cacatcatcacttaacagattttttaacgtcagggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagggacca 35178882  T
Q  707 ttgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
     | ||||| ||| ||| | ||| ||| ||||||||||| ||||    
T  35178883 atatgacagcgatgtgcagagtcagggaccaaagtgactattt 35178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 348 - 469
Target Start/End: Complemental strand, 36033074 - 36032952
Alignment:
Q  348 taactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagag 446  Q
    ||||||||||||| | ||| ||| |||| ||||||||||||||||| |  ||||| || |||  ||||| ||  ||||||||  |||| |||||||||||    
T  36033074 taactgatagtaagtgtgcacagtcaggaacctaacaacaagtctctcgtaaccagataacagtttcatcgaataagatgaccaagttcttgacgaagag 36032975  T
Q  447 aaacacttccttgggacgagttt 469  Q
     |||| ||| ||||||| |||||    
T  36032974 caacatttcgttgggacaagttt 36032952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 597
Target Start/End: Complemental strand, 45476403 - 45476317
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataa 597  Q
    ||||| ||||| ||||||||||| ||||||   | |||||||||||||||| |||  ||||||||||| || || | ||||||||||    
T  45476403 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtctctgtgacacctcttaatcctcgtcagcataa 45476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 3e-97; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 19 - 506
Target Start/End: Original strand, 26585693 - 26586188
Alignment:
Q  19 aatcatatagcagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaat 118  Q
    |||||||  |||||||||||||| ||| ||||||||||||| |||||||||  |||| || ||| |||||||||||||||||||||||||| ||| ||||    
T  26585693 aatcatactgcagaaatgcacatactcagataaatatactaggacaatatttataaataatcaagtgaagtttagttgaatatgtattctttaagataat 26585792  T
Q  119 aatttttcttaaaaaa-tgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatac------aaatacaa 211  Q
    ||| |||||||||||| | ||| | |||||||| ||||| ||||| ||||||||||||||||||||||  ||||||||||| || |      |||||||     
T  26585793 aatctttcttaaaaaaataaaatagtataatttaaagttgacattgagattaaaaagaagaaaccatgacggaattcaagaaatgctaatgcaaatacat 26585892  T
Q  212 aatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggc 311  Q
    |||||||||||||||||||||||| || | ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  26585893 aatttggaaaaatgtgattcataatcaaacctggaagcctgaaacaattcttcatattgttagaattgataaattgatataaaataggatcataataggc 26585992  T
Q  312 ctactttgtgcctgtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaac 410  Q
    |||||||||| ||||||| ||||||  |  ||||||| | ||| | ||| | |   | | ||  ||| ||||||||  |||||| ||||||||  |||||    
T  26585993 ctactttgtgtctgtaagtgtttacagtcagggaccttagtgacaataagtgtttactgtcaaagacttaacaacacatctcccgcaaccacagaacaac 26586092  T
Q  411 ttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttc 506  Q
    ||||| ||| || |||||  |||||||||||||||| |||||||  |||||| |||||| |||||||||||||| |||||||| ||||| ||||||    
T  26586093 ttcatcgaggaaaatgaccaagtttttgacgaagagcaacactttgttgggatgagtttggggatattgatttttggttcagggatattaattttc 26586188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 342 - 759
Target Start/End: Complemental strand, 38854165 - 38853747
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacatta-caacttcattgagaaagatgactcagtttttga 439  Q
    ||||||||||| ||||||| |||||  || || | |||||||| |||||||||  ||| ||||  | |||||||||||||||||||||||||||| ||||    
T  38854165 gggacctaactaatagtaagtatgcaaagtcacgaacctaacatcaagtctccttcaatcacagaaacaacttcattgagaaagatgactcagttcttga 38854066  T
Q  440 cgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggata-ttaattttcggttcagggactaaag 538  Q
    ||||||  |||   || ||||||||||||| | ||||||||||||||||||| | |||||||| |||  ||||| || |||||||||||| |||| || |    
T  38854065 cgaagaacaac---tcattgggacgagtttggagatattgattttcggttcatggatattgatgttcggggataattgattttcggttcaaggaccaagg 38853969  T
Q  539 tggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata-ttattcaatgtc 637  Q
     |   | | |||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||| ||||  ||||||||| ||||| || |||    
T  38853968 cgactattatctactttcaatttagtccctgtgacacctcatactccttgttagcataaaacttttgtcacgtcatgagttaacataattatttaacgtc 38853869  T
Q  638 agaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaacca 737  Q
    ||  |||||| | |||||||||| ||| ||| || |||||| |||||||||||||||| |||  ||||||| |||||| |||||||| ||| ||| ||||    
T  38853868 agtgactaaattgataacggaagtgcacatttagggactactttgtatttaatcctgagtcagagacctttatgacaatgaagtgtagagtcagggacca 38853769  T
Q  738 aagtgaccatttactcaatttt 759  Q
    |||||||| ||||||| |||||    
T  38853768 aagtgaccgtttactctatttt 38853747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 325 - 752
Target Start/End: Original strand, 34582365 - 34582794
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaag 423  Q
    ||||| |||||||||  ||||||||||||||||||| |||||  || || ||||||| || ||||||  || |||||||   ||| |||||||| | ||     
T  34582365 gtaagtgtttactatcagggacctaactgatagtaagtatgcatagtcatggacctaccagcaagtcagccgcaaccactaaacagcttcattggggaat 34582464  T
Q  424 atgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcg 523  Q
    ||||| ||||| ||||||||||| |||||||  |||| | ||||||  ||||||||||||  |||||| | ||||||||||||  ||||||| |||||      
T  34582465 atgacccagttattgacgaagagcaacactttgttggaatgagtttgaggatattgatttatggttcaaggatattgattttcggggatattgatttttt 34582564  T
Q  524 gttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca 623  Q
     ||||||||||||||||| || |||||||||| |||||||| |||||||||||||||||   ||||||||||||||| |||| ||||| ||| ||| | |    
T  34582565 attcagggactaaagtggacattttctacttttactttagttcatgtgacacctcatacctcttgtcagcataaaacctttgccacatgatcagttgata 34582664  T
Q  624 t-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtg 722  Q
    | |||||| || |||||  |||||||| |||||||||| ||| |||||| |||||| ||||||||||||| || |||| ||||||||| ||| | | |||    
T  34582665 taattatttaacgtcagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcccgagtcaatgacctttgtaacagcaaggtg 34582764  T
Q  723 tatagttaggaaccaaagtgaccatttact 752  Q
     | ||| ||| || || |||||||||||||    
T  34582765 cagagtcagggactaacgtgaccatttact 34582794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 342 - 623
Target Start/End: Complemental strand, 18675494 - 18675213
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    ||||||||||||||||||| ||||| ||| |||| |||||||| ||||||||||  |||||| | |||||||||||||| ||||| ||  |||| |||||    
T  18675494 gggacctaactgatagtaagtatgcacagtcaggaacctaacatcaagtctcccgtaaccacctaacaacttcattgaggaagataacctagttcttgac 18675395  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtg 540  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| | ||   ||||||||||||  ||||||||||||| | |||| |||  ||||||    
T  18675394 gaagagaaacacttctttgggacgagtttggggatattgattttcgatccaatgatattgattttcggggatattaatttttgattcaaggatcaaagtg 18675295  T
Q  541 gtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca 623  Q
       | |||||||||| |||||||||| |||||||||||||||| ||| |||||||||||| |||||||||| ||| |||||||    
T  18675294 acaattttctactttgactttagtcc-tgtgacacctcatactttttatcagcataaaacatttgtcacattatcagttaaca 18675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 14887088 - 14886863
Alignment:
Q  29 cagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttctt 128  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||| || || |||||| ||||||||||  |||||||| || |||||||| ||||||    
T  14887088 cagaaatgcacatgctcagataaatattctaagacaatatttgtaaataatcatttgaagcttagttgaat--gtattcttgaaactaataatatttctt 14886991  T
Q  129 aaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtga 228  Q
    ||||||| ||| | | |||||||||||||||||| ||||||||||| |||||  ||| ||||||| |||||||||||||||| ||||||| |||||||||    
T  14886990 aaaaaataaaatagtgtaatttgaagttaacattgagattaaaaaggagaaattatgaaggaatttaagatatacaaatacagaatttgggaaaatgtga 14886891  T
Q  229 ttcataaccatatctgaaagcctgaaac 256  Q
    |||| ||||| | |||||||| ||||||    
T  14886890 ttcacaaccagacctgaaagcttgaaac 14886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 18675810 - 18675621
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaa 131  Q
    |||||||||| |||  ||||||||| || |||||||||  | || || ||||||||||||||||||||||||||| |||||||||||||| ||||||||     
T  18675810 aaatgcacattctcaaataaatatattaggacaatatttttgaataatcaattgaagtttagttgaatatgtatttttaaagctaataatctttcttaag 18675711  T
Q  132 aaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaa 221  Q
    |||||||| | |||||  ||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  18675710 aaatgaaatagtataacctgaagttaatattgagattaaaaagaagaaaccatgaaggaattcaaggtatacaaatacagaatttggaaa 18675621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 457 - 753
Target Start/End: Complemental strand, 38855085 - 38854787
Alignment:
Q  457 ttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggata-ttaattttcggttcagggactaaagtggtcaatttctacttt 555  Q
    |||||| |||||| | |||||||||||| |||||| | |||||||| |||  ||||| || |||||||||||| |||| || |||   | | ||||||||    
T  38855085 ttgggatgagtttggagatattgatttttggttcatggatattgatgttcggggataattgattttcggttcaaggaccaaggtgactattatctacttt 38854986  T
Q  556 cactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata-ttattcaatgtcagaaactaaagtaataa 654  Q
    || ||||| || ||||||||||||||||| |||| ||||||||  ||||||||| ||||  ||||||||| ||||| ||  ||||  |||||| | ||||    
T  38854985 caatttagcccctgtgacacctcatactccttgttagcataaattttttgtcacgtcatgagttaacataattatttaacttcagtgactaaattgataa 38854886  T
Q  655 cggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactc 753  Q
    |  ||| ||| ||| ||  ||||| |||||||||||||||| |||| ||||||| ||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  38854885 cataagtgcacatttaggaactactttgtatttaatcctgagtcaaagacctttatgacaacgaagtgtagagtcagggaccaaagtgactatttactc 38854787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 371 - 755
Target Start/End: Original strand, 12745963 - 12746328
Alignment:
Q  371 cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagttta 470  Q
    |||||||||||||| ||| ||| | ||||||||  |||||||||||||| |||||||||||||| |||||||| || |||| ||| |||||| ||||||     
T  12745963 cagggacctaacaataagcctctcgcaaccacaaaacaacttcattgaggaagatgactcagttcttgacgaaaagcaacatttcgttgggatgagtttg 12746062  T
Q  471 gggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgt 570  Q
      | |||||||||||||   ||  |||||||||||               |||||  |||||  ||| || ||| ||||||||||||||||||||| |||    
T  12746063 aagctattgattttcgg---ag--atattgatttt---------------tcggtctagggatcaaaatgatcattttctactttcactttagtccctgt 12746142  T
Q  571 gacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca-tattattcaatgtcagaaactaaagtaataacggaagcgcatattc 669  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||  |  |||||| ||  | |   |||||||| |||||||||| ||| ||||    
T  12746143 gacacctcatactctttgtcagcataaaacttttgtcacataatcacttactagaattatttaacattatggactaaagtgataacggaagggcacattc 12746242  T
Q  670 agtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaa 755  Q
    ||  ||||| |||||||||||||||| ||| | ||||||  |||  ||| ||| | ||| | ||||||||||||||||||||||||    
T  12746243 aggaactactttgtatttaatcctgagtcaggaacctttaagactgcgaggtgcagagtcaagaaccaaagtgaccatttactcaa 12746328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 342 - 493
Target Start/End: Complemental strand, 26585449 - 26585297
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    ||||||||||| ||||||| ||||| ||  || |||||||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||| | |||    
T  26585449 gggacctaactcatagtaaatatgcacaatcaaggacctaacaacaagtctcccacaactacagaacaacttcattgagaaagatgacccagttctagac 26585350  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttcggttcagg 493  Q
     ||||| |||||||| |||| | ||||||| ||||||| ||||||||||||||    
T  26585349 aaagagcaacacttcgttggaatgagtttaaggatatttattttcggttcagg 26585297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 495 - 712
Target Start/End: Complemental strand, 37607359 - 37607141
Alignment:
Q  495 atattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagca 594  Q
    |||||||||||| |||||||| ||||| ||||||| ||| ||||||   | ||||||| ||||||||||||| ||||||| ||||||||  |||| ||||    
T  37607359 atattgattttcgaggatattgatttttggttcagagaccaaagtgactattttctacgttcactttagtccttgtgacatctcatacttcttgttagca 37607260  T
Q  595 taaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcct 693  Q
    |||||| |||||||| ||||| |||||||| |||||  || |||||  |||||||| |||||||||| ||| ||| |  |||||| |||||||||||| |    
T  37607259 taaaacctttgtcacgtcatcagttaacataattatataacgtcagggactaaagtgataacggaagtgcacattaaaggactaccttgtatttaatcat 37607160  T
Q  694 gattcaaggacctttgtga 712  Q
    || | | |||| |||||||    
T  37607159 gagttagggacatttgtga 37607141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 546 - 755
Target Start/End: Original strand, 14887415 - 14887625
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaact 644  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||| |||||| | |||||| || |  ||| | |    
T  14887415 tttctactttcactttagtccctgtgacacctcatactccttgttagcataaaacatttgtcacatcatcagttaacaaaattatttaacgctagagatt 14887514  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgac 744  Q
    ||||| |  | ||||  ||| |||||| |  ||| || | ||||||||||| ||| ||||||| |||||| ||| ||| | |||| || |||||||||||    
T  14887515 aaagtgacgatggaattgcacattcagggtatactttatgtttaatcctgagtcagggaccttcgtgacagcgaggtgcagagtttgggaccaaagtgac 14887614  T
Q  745 catttactcaa 755  Q
    |||||||||||    
T  14887615 catttactcaa 14887625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 507 - 754
Target Start/End: Complemental strand, 26585320 - 26585072
Alignment:
Q  507 aaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgt 606  Q
    ||||||||| ||||||||||||||||| ||||||  || |||||| |||||||||||||| ||||||||||||||||| |||||| |||||||  | |||    
T  26585320 aaggatatttattttcggttcagggaccaaagtgacca-tttctattttcactttagtccctgtgacacctcatactccttgtcaacataaaa--tatgt 26585224  T
Q  607 cacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactac---attgtatttaatcctgattcaagg 702  Q
    |||||||||  ||||||| |||||| || |  ||| |||||||| ||||| |||| | | || || |||||||    || ||| ||||| ||| ||| ||    
T  26585223 cacatcatcaattaacataattatttaacgctagagactaaagtgataacagaagtgtacatccaatgactacttttttttatctaatcttgagtcaggg 26585124  T
Q  703 acctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactca 754  Q
    ||||||||| || |||  || | | | | |||||||||||||||||||||||    
T  26585123 acctttgtggcagcgagatgcagattcatgaaccaaagtgaccatttactca 26585072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 508 - 714
Target Start/End: Original strand, 34037552 - 34037759
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtc 607  Q
    |||||||| ||||| |||||||| |  ||||||   | |||||||| |||||||||||  ||||||||||||||||| ||||||||||||||| | ||||    
T  34037552 aggatattgatttttggttcaggaatcaaagtgactattttctactgtcactttagtctgtgtgacacctcatactccttgtcagcataaaacatgtgtc 34037651  T
Q  608 acatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacct 706  Q
    ||||||||  ||||||| ||| || || | | | ||||||||| ||||| |||| ||| | |||  ||||   |||||||||||||||| | | ||||||    
T  34037652 acatcatcacttaacataattttttaacggcgggaactaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatggacct 34037751  T
Q  707 ttgtgaca 714  Q
    || |||||    
T  34037752 ttatgaca 34037759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 18675624 - 18675531
Alignment:
Q  244 gaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaagggtttact 337  Q
    |||||||| |||| ||| ||||||| | |||||||||||||||||||||||||||||| |||| | | ||||||||| |||||||| |||||||    
T  18675624 gaaagcctcaaacaatttttcatatcgttagaattgataaattgatataaaataggatcatagcaagactactttgtacctgtaagtgtttact 18675531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 511 - 718
Target Start/End: Original strand, 21733653 - 21733864
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcaca 610  Q
    ||||| ||||||||||||| ||| ||||||  || ||| ||||||||||||||||   ||||||| |||||||| ||||||||||||||| | |||||||    
T  21733653 atattgattttcggttcagagaccaaagtgaccattttttactttcactttagtcatcgtgacacttcatactccttgtcagcataaaacatgtgtcaca 21733752  T
Q  611 tcatcggttaaca-tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgat---tcaaggacct 706  Q
    |||||  ||||||  ||| || ||   ||  ||||||||| || ||||||| ||| | |||| ||||   |||||||||||| ||||   ||| ||||||    
T  21733753 tcatcacttaacagaattttttaactgcaacaactaaagtgatgacggaagtgcagagtcagagacttatttgtatttaatcatgatgagtcagggacct 21733852  T
Q  707 ttgtgacaacga 718  Q
    ||||||||||||    
T  21733853 ttgtgacaacga 21733864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 376 - 484
Target Start/End: Original strand, 14887282 - 14887390
Alignment:
Q  376 acctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggat 475  Q
    |||||||| || ||||||| ||||||||  ||||| |||||||| ||||||||  |||| |||| |||||| |||||||| |||||||||||||  ||||    
T  14887282 acctaacatcaggtctcccgcaaccacagaacaacgtcattgaggaagatgacctagttcttgaagaagagcaacacttcgttgggacgagtttgaggat 14887381  T
Q  476 attgatttt 484  Q
    |||||||||    
T  14887382 attgatttt 14887390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 372 - 491
Target Start/End: Complemental strand, 14886799 - 14886681
Alignment:
Q  372 agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttag 471  Q
    ||||||||||||||||||||||| |||| |||  |||| ||||||||  |||||||| ||||| ||||||||| | |||||||| |||  || ||||| |    
T  14886799 agggacctaacaacaagtctcccgcaacaacaaaacaatttcattgatgaagatgac-cagttcttgacgaagcgtaacacttcgttgaaacaagtttgg 14886701  T
Q  472 ggatattgattttcggttca 491  Q
    |||||||||||||| |||||    
T  14886700 ggatattgattttctgttca 14886681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 374 - 493
Target Start/End: Original strand, 18676605 - 18676724
Alignment:
Q  374 ggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttaggg 473  Q
    |||||||||| ||||||| |||||||||||   || |||||||||| ||||||||  |||| ||||||||||| |||||||| ||| ||||| ||| | |    
T  18676605 ggacctaacatcaagtcttccacaaccacagatcagcttcattgaggaagatgacctagttcttgacgaagagtaacacttcgttgagacgactttggag 18676704  T
Q  474 atattgattttcggttcagg 493  Q
    |||||||||||  |||||||    
T  18676705 atattgattttttgttcagg 18676724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 379 - 486
Target Start/End: Complemental strand, 37607454 - 37607347
Alignment:
Q  379 taacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatatt 478  Q
    ||||||||| ||| | |||||||||  ||||||||||| || |||||||| ||||| |||| |||||| |||||||  ||| ||||||||| ||||||||    
T  37607454 taacaacaaatcttcgacaaccacaaaacaacttcattaaggaagatgacccagttcttgaggaagagcaacacttagttgagacgagtttggggatatt 37607355  T
Q  479 gattttcg 486  Q
    ||||||||    
T  37607354 gattttcg 37607347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 342 - 486
Target Start/End: Original strand, 38854256 - 38854401
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagttt-ttga 439  Q
    |||||||| |||||||||| ||||| ||| ||  |||||||||||||||||||| |||||| |  |||||||||||||| ||||||| || |||| ||||    
T  38854256 gggacctagctgatagtaagtatgcacagtcaaagacctaacaacaagtctcccgcaaccatagaacaacttcattgaggaagatga-tccgtttcttga 38854354  T
Q  440 cgaagagaaacacttccttgggacgagtttagggatattgattttcg 486  Q
     |||||| |||||||| |||||| ||||||  | ||||| |||||||    
T  38854355 agaagagcaacacttcgttgggatgagtttgagaatatttattttcg 38854401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 43380810 - 43380738
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||| ||||||  || ||||||||||||||||||| ||||||||||||||||    
T  43380810 ggatattgatttttggttcagggaccaaagtgaccattttctactttcactttagttcatgtgacacctcata 43380738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 509 - 695
Target Start/End: Original strand, 17466709 - 17466895
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||||||||| |||| |||||  ||| ||  || ||| ||||||||||||||| | ||||||||||||||  | |||||| | |||||| | |||||    
T  17466709 ggatattaatttttggtt-agggatcaaattgaccattttttactttcactttagtgcgtgtgacacctcatatgccttgtcatcctaaaacatgtgtca 17466807  T
Q  609 catcatcggttaaca-tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctga 695  Q
    |||||||  ||||||  |||||| || |||  | |||||||| |||||||||| ||| | |||| |||| | ||||||||||||||||    
T  17466808 catcatcacttaacagaattatttaacgtcttagactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctga 17466895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 509 - 600
Target Start/End: Complemental strand, 31442574 - 31442483
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaac 600  Q
    ||||||| ||||||||||||||||| || ||| ||| |||  |||||||||||||||| | ||||||||||| | ||||||||||| |||||    
T  31442574 ggatattgattttcggttcagggaccaatgtgttcatttttgactttcactttagtccttatgacacctcatgcactttgtcagcacaaaac 31442483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 642 - 760
Target Start/End: Complemental strand, 8420122 - 8420004
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||| | ||||| |||| ||| |||||| |||||| |||||||||||| ||| ||| |||| ||||||||  |||| || | ||| ||| ||||||||    
T  8420122 actaaactgataacagaagtgcacattcagggactactttgtatttaatcttgactcagggacatttgtgaccgcgaaatgcagagtcagggaccaaagt 8420023  T
Q  742 gaccatttactcaattttt 760  Q
    ||||||||||||| |||||    
T  8420022 gaccatttactcatttttt 8420004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 615
Target Start/End: Complemental strand, 14886700 - 14886594
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| |||||| ||||| |||| |||| |   | ||| |||||||| |||||||| | |||| ||||||||||||||||||||||||| ||||| ||    
T  14886700 ggatattgattttctgttcaaggaccaaagcgacaattttgtactttcattttagtccctatgacgcctcatactctttgtcagcataaaatttttgcca 14886601  T
Q  609 catcatc 615  Q
    |||||||    
T  14886600 catcatc 14886594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 642 - 754
Target Start/End: Original strand, 32766253 - 32766365
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| ||| | |||| ||||   |||||||||||||||| ||| |||||| ||||||||||| ||| | ||| ||| ||||||||    
T  32766253 actaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtcagggaccaaagt 32766352  T
Q  742 gaccatttactca 754  Q
    ||| |||| ||||    
T  32766353 gactatttgctca 32766365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 578 - 760
Target Start/End: Original strand, 15441920 - 15442103
Alignment:
Q  578 catactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgact 676  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||| | |||||| ||    ||| |||||||| ||||   ||| ||| |||||  ||||    
T  15441920 catactctttgtcagcataaaacatttgccacatcatcagttaacaaaattatttaacactagagactaaagtgataataaaagtgcacattcaaggact 15442019  T
Q  677 acattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaattttt 760  Q
    || |||||||||||||||| ||| | | |||||||||| ||| |   | ||| ||  | ||||| |||||||||||||||||||    
T  15442020 actttgtatttaatcctgagtcaggaatctttgtgacagcgaggaacagagtcagagaacaaagcgaccatttactcaattttt 15442103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 39016285 - 39016355
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||   | |||||||||||||||| |||||||||||||||||||    
T  39016285 atattgatttttggttcagggaccaaagtgacaattttctactttcactttggtccatgtgacacctcata 39016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 566
Target Start/End: Complemental strand, 21732338 - 21732281
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtcc 566  Q
    ||||||||||||| ||||||||||| ||||||  || |||||||||||||||||||||    
T  21732338 ggatattaatttttggttcagggaccaaagtgaccattttctactttcactttagtcc 21732281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 17330119 - 17330191
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||| ||||||  || ||| ||||||||||||||||  ||||||||||||||    
T  17330119 ggatattgattttgggttcagggaccaaagtgaccattttttactttcactttagtctctgtgacacctcata 17330191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 32765160 - 32765088
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||| |||| |  || ||||||||||||||||||||| | ||||||||||||    
T  32765160 ggatattgatttttggttcagggaccaaagcgaccattttctactttcactttagtccctatgacacctcata 32765088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 581
Target Start/End: Complemental strand, 33162003 - 33161939
Alignment:
Q  517 attttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| |||||||||||||||||| | | |||||||||||| |||||||  ||||||||||||||    
T  33162003 atttttggttcagggactaaagtgatgattttctactttcattttagtctttgtgacacctcata 33161939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 546 - 625
Target Start/End: Complemental strand, 12003773 - 12003694
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata 625  Q
    |||||| |||||||||||||| ||||||| ||||| | |||||| |||||||||| |||| || |||||| | |||||||    
T  12003773 tttctattttcactttagtccctgtgacatctcatgcactttgtaagcataaaacatttgccaaatcatcagctaacata 12003694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 510 - 581
Target Start/End: Complemental strand, 17466283 - 17466212
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||||||||  ||| ||| || |||||| ||| |||||||||| |||||| ||||||||||||||||||    
T  17466283 gatattaatttttagtttaggaaccaaagtgatcattttctacttttactttaatccatgtgacacctcata 17466212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 509 - 572
Target Start/End: Complemental strand, 31090380 - 31090317
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtga 572  Q
    ||||||||||||| ||||||||||| |||| || || |||||||||||||||| |||| |||||    
T  31090380 ggatattaatttttggttcagggaccaaagcggccattttctactttcactttggtccctgtga 31090317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 607 - 749
Target Start/End: Original strand, 31091505 - 31091648
Alignment:
Q  607 cacatcatcggttaacatattattc-aatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacc 705  Q
    |||||||||  |||||||||| ||  || |||||| |||||||| |||||||||| ||| | |||| ||||   |||||||||||||||| ||| |||||    
T  31091505 cacatcatcacttaacatatttttttaacgtcagagactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacc 31091604  T
Q  706 tttgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
    | ||||||| | | ||| | ||| ||| ||||||||||| ||||    
T  31091605 tatgtgacagcaaggtgcagagtcagggaccaaagtgactattt 31091648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 632 - 755
Target Start/End: Complemental strand, 33439360 - 33439237
Alignment:
Q  632 aatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttag 731  Q
    |||||||||||||||| | |||| ||| | ||| ||| |  |||||| || ||||||||| ||| ||||| |||||| ||||||||| ||| | ||| ||    
T  33439360 aatgtcagaaactaaattgataatggaggtgcacattaaaagactactttatatttaatcatgactcaagtacctttatgacaacgatgtgcagagtcag 33439261  T
Q  732 gaaccaaagtgaccatttactcaa 755  Q
    |   ||||||||||||||||||||    
T  33439260 ggttcaaagtgaccatttactcaa 33439237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 406 - 445
Target Start/End: Complemental strand, 38855821 - 38855782
Alignment:
Q  406 acaacttcattgagaaagatgactcagtttttgacgaaga 445  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  38855821 acaacttcattgagaaagatgactcagttcttgacgaaga 38855782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 718
Target Start/End: Complemental strand, 7412335 - 7412125
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    |||||||  |||| |||| |||||  ||||||  || |||||| |||||||||||||| |||||||| |||||  |  ||||| | |||||| | |||||    
T  7412335 ggatattgttttttggttgagggaacaaagtgaccattttctattttcactttagtccttgtgacacatcatatgccatgtcatcgtaaaacatgtgtca 7412236  T
Q  609 catcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
      |||||  ||||||| |||||| ||||| ||  |||||||| |||||||||| |||   ||||||||| | || ||||||||| ||| |||  || ||     
T  7412235 tgtcatcacttaacataattatttaatgttagggactaaagtgataacggaagtgcactatcagtgacttctttatatttaatcttgagtcagagatcta 7412136  T
Q  708 tgtgacaacga 718  Q
    |||||||||||    
T  7412135 tgtgacaacga 7412125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 543 - 605
Target Start/End: Original strand, 38854594 - 38854656
Alignment:
Q  543 caatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttg 605  Q
    |||||| || |||||||||||||| ||||||| |||||||||||||||| | |||||| ||||    
T  38854594 caatttttattttcactttagtccctgtgacaactcatactctttgtcaccttaaaacctttg 38854656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 550 - 691
Target Start/End: Original strand, 38856288 - 38856430
Alignment:
Q  550 tactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca-tattattcaatgtcagaaactaaag 648  Q
    ||||||||||||||| |  ||| || |||||||||||||||||| |||||| |||||||||| |||  || |||  |||||| || |||||| | |||||    
T  38856288 tactttcactttagttcccgtggcaactcatactctttgtcagcttaaaacctttgtcacattatcaatttacagaattatttaacgtcagagattaaag 38856387  T
Q  649 taataacggaagcgcatattcagtgactacattgtatttaatc 691  Q
    | |||||  ||| ||||| ||||  ||||| || |||||||||    
T  38856388 tgataacaaaagtgcatactcaggaactactttatatttaatc 38856430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 40000237 - 40000307
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||| |||||| ||| |||||||||||||||| |||| | ||||||||||||    
T  40000237 atattgatttttggttcaaggaccaaagtgatcattttctactttcactttggtccctctgacacctcata 40000307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 508 - 581
Target Start/End: Complemental strand, 24458284 - 24458211
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||||| ||||| | || |||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  24458284 aggatattgatttttgattgagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 24458211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 34582095 - 34582046
Alignment:
Q  19 aatcatatagcagaaatgcacatgctcggataaatatactaagacaatat 68  Q
    |||||||  |||||||||||||||||| ||||||||||||| ||||||||    
T  34582095 aatcatactgcagaaatgcacatgctcagataaatatactaggacaatat 34582046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 714
Target Start/End: Original strand, 8420959 - 8421007
Alignment:
Q  666 attcagtgactacattgtatttaatcctgattcaaggacctttgtgaca 714  Q
    |||||| |||||| |||||||||||||||| |||| |||||||||||||    
T  8420959 attcagagactactttgtatttaatcctgagtcaatgacctttgtgaca 8421007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 14704228 - 14704156
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| |||||| |||| ||||||   | |||||||||||||||| |||| ||||||||||||||    
T  14704228 ggatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccctgtgacacctcata 14704156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 660
Target Start/End: Original strand, 31814261 - 31814376
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca-tattattcaatgtcagaaact 644  Q
    |||||| ||||| ||||||| ||||||||||||||| |   ||||| | |||||||| ||||||||||||  ||||||  |||||| ||||  ||  |||    
T  31814261 tttctattttcattttagtctatgtgacacctcatatttcatgtcatcgtaaaacttgtgtcacatcatcacttaacagaattatttaatgctagggact 31814360  T
Q  645 aaagtaataacggaag 660  Q
    ||||| ||||||||||    
T  31814361 aaagtgataacggaag 31814376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 12396228 - 12396162
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| |||| || ||||||||||   | |||||||||||| |||||||||||||||||    
T  12396228 ggatattgatttttggtttagtgactaaagtgactattttctactttcattttagtccatgtgacac 12396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 24459356 - 24459426
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||  ||||||  || |||||||||||||||| |||| | ||||||||||||    
T  24459356 atattgatttttggttcagggatcaaagtgaccattttctactttcactttggtccctatgacacctcata 24459426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 31443126 - 31443196
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    |||||| |||||||||||||| || ||| ||   | ||||||||||||||||||||  |||||||||||||    
T  31443126 gatattgattttcggttcaggaaccaaaatgacaattttctactttcactttagtcactgtgacacctcat 31443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 39015226 - 39015156
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||| ||| ||  || |||||||||||||||| |||| ||||||||||||||    
T  39015226 atattgatttttggttcaaggaccaaactgaccattttctactttcactttggtccctgtgacacctcata 39015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 516 - 577
Target Start/End: Complemental strand, 7073866 - 7073805
Alignment:
Q  516 aattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacct 577  Q
    |||||| ||||||||||| |||||| ||| ||| || |||| ||||||||| ||||||||||    
T  7073866 aatttttggttcagggaccaaagtgatcattttttattttcgctttagtccctgtgacacct 7073805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 546 - 615
Target Start/End: Original strand, 12004914 - 12004983
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatc 615  Q
    ||||| |||| ||||||||| ||||||| |||||| |   ||||||||| ||||| ||||||||||||||    
T  12004914 tttcttctttaactttagtcgatgtgacccctcatgcctcttgtcagcacaaaacatttgtcacatcatc 12004983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 510 - 599
Target Start/End: Original strand, 18676704 - 18676793
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaa 599  Q
    |||||| |||||  |||||||||| ||||||  || ||||||||||| ||||||||  | |||||  |||||||| ||||| ||||||||    
T  18676704 gatattgattttttgttcagggaccaaagtgaccattttctactttcgctttagtctctttgacatttcatactccttgtcggcataaaa 18676793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 511 - 580
Target Start/End: Original strand, 28864693 - 28864762
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||| ||||||  ||| || |||||| || ||| |||||| |||||||||||||||| |||||||||||    
T  28864693 atattgattttcaattctggaactaaaatgatcattttctattttcactttagtccatatgacacctcat 28864762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 3e-91; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 19 - 337
Target Start/End: Original strand, 330393 - 330711
Alignment:
Q  19 aatcatatagcagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaat 118  Q
    |||||||  |||||||||||||||||| | |||||||| || ||||||||| ||||| || ||| |||||||||||||||||||||||||| ||||||||    
T  330393 aatcatactgcagaaatgcacatgctcagttaaatataataggacaatatttgtaaataatcaactgaagtttagttgaatatgtattcttgaagctaat 330492  T
Q  119 aatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttgg 218  Q
    ||| || |||||||||||||| | |||||||||||||||||||| | |||||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  330493 aatattccttaaaaaatgaaatagtataatttgaagttaacattgaaattaaaaagaagaaaccatgtacgaattcaagatatacaaatacataatttgg 330592  T
Q  219 aaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctacttt 318  Q
     |||||||||||| || |||   || ||||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||| ||| |||  |||||||    
T  330593 gaaaatgtgattcgtagccaggcctaaaagccttaaacaattcttcatatttctagaattgataaattgatataaaataagatcataatagatctacttt 330692  T
Q  319 gtgcctgtaagggtttact 337  Q
    |||| |||||| |||||||    
T  330693 gtgcttgtaagtgtttact 330711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 342 - 614
Target Start/End: Complemental strand, 8870390 - 8870115
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    ||||||||||||| ||||||||| | ||| ||||||||||| || |||||||   |||||| |  ||||||||||||||  |||| ||  |||| |||||    
T  8870390 gggacctaactgacagtaactatacacagtcagggacctaataataagtctcattcaaccaaagaacaacttcattgaggtagataaccgagttcttgac 8870291  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtg 540  Q
    |||||  |||||||  |||||||||||||  |||||||||||||| ||| ||| ||||||||||||  ||||||  |||||  |||||||||| |||||     
T  8870290 gaagaacaacactttgttgggacgagtttgaggatattgattttcagtttagggatattgattttctgggatatcgatttttagttcagggaccaaagta 8870191  T
Q  541 gtcaatttctactttcactttagtccatgtgacacctc--atactctttgtcagcataaaacttttgtcacatcat 614  Q
     ||| |||||||||||| |||||||  |||||||||||  |||||| ||||||||||||||| || | ||||||||    
T  8870190 atcattttctactttcattttagtctttgtgacacctcatatactccttgtcagcataaaacattggccacatcat 8870115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 344 - 495
Target Start/End: Original strand, 25621469 - 25621621
Alignment:
Q  344 gacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacga 442  Q
    ||||||||||||||||| ||||| ||  || | ||||||||||||||||||| ||||||||  |||||||||||||| |||||||| ||||| |||||||    
T  25621469 gacctaactgatagtaagtatgcacaatcaagaacctaacaacaagtctcccgcaaccacagaacaacttcattgaggaagatgacccagttcttgacga 25621568  T
Q  443 agagaaacacttccttgggacgagtttagggatattgattttcggttcaggaa 495  Q
    |||| |||||||| ||| |||||||||  |||||||| |||||||||||||||    
T  25621569 agagcaacacttcgttgagacgagtttgaggatattggttttcggttcaggaa 25621621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 460 - 597
Target Start/End: Complemental strand, 24287772 - 24287635
Alignment:
Q  460 ggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcact 559  Q
    ||||||||||   ||||||||||||||||| ||| |||||||| |||| ||||||| ||||| |||||||||||||||| |  || ||||||||||||||    
T  24287772 ggacgagtttgaagatattgattttcggtttagggatattgatattcagggatattcatttttggttcagggactaaagcgaccattttctactttcact 24287673  T
Q  560 ttagtccatgtgacacctcatactctttgtcagcataa 597  Q
    ||||||| ||||||||||||||||| ||||| ||||||    
T  24287672 ttagtccctgtgacacctcatactccttgtcggcataa 24287635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 448 - 655
Target Start/End: Original strand, 8870846 - 8871056
Alignment:
Q  448 aacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatt 547  Q
    |||||||  ||||||||||||| ||||||||||||||| ||| ||| ||||||||||||  ||||||  |||||  |||||||||| |||||   || ||    
T  8870846 aacactttgttgggacgagtttggggatattgattttcagtttagggatattgattttctgggatatcgatttttagttcagggaccaaagtaaccattt 8870945  T
Q  548 tctactttcactttagtccatgtgacacctc--atactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaact 644  Q
    |||||||||| ||||||   ||||||||| |  |||||| ||||||||||||||| |||| ||||||||  |||||| | || ||| ||| ||||| |||    
T  8870946 tctactttcattttagtttttgtgacaccacatatactccttgtcagcataaaacatttgccacatcattagttaacaaaataatttaatatcagagact 8871045  T
Q  645 aaagtaataac 655  Q
    ||||| |||||    
T  8871046 aaagtgataac 8871056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 546 - 692
Target Start/End: Complemental strand, 27067988 - 27067841
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaact 644  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||||||||| | |||||||||||| | |||| ||| |||||| ||||||||| |||    
T  27067988 tttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcagagact 27067889  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcc 692  Q
    ||||| |||| | ||| ||| |||||| |||||| |||  ||||||||    
T  27067888 aaagtgataatgaaagtgcacattcagggactactttgcttttaatcc 27067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 546 - 692
Target Start/End: Original strand, 27210325 - 27210472
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaact 644  Q
    ||||||||||||||||||||  ||||||||  ||||||||||||||||||||| | |||||||||||| | |||| ||| |||||| ||||||||| |||    
T  27210325 tttctactttcactttagtctctgtgacacaccatactctttgtcagcataaaccatttgtcacatcacccgttagcataattatttaatgtcagagact 27210424  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcc 692  Q
    ||||| |||| | ||| ||| |||||| |||||| |||  ||||||||    
T  27210425 aaagtgataatgaaagtgcacattcagggactactttgcttttaatcc 27210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 509 - 695
Target Start/End: Original strand, 24288746 - 24288933
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| |||||||||||| |||  ||| |   || |||||||||| | |||||||||||| |||| |||||||| ||||||||||||||| |||||||    
T  24288746 ggatatttattttcggttcaaggatcaaaattaccattttctacttttattttagtccatgtcacacatcatactccttgtcagcataaaacctttgtca 24288845  T
Q  609 catcatcggttaaca-tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctga 695  Q
    ||||||| |||||||  |||||  || | |||| | |||||| |||| ||||| ||| |||||  |||||| ||||| ||||||||||    
T  24288846 catcatcagttaacagaattatataacgccagagaataaagtgataatggaagtgcacattcaaggactactttgtaattaatcctga 24288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 495 - 625
Target Start/End: Complemental strand, 30917969 - 30917840
Alignment:
Q  495 atattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagca 594  Q
    ||||||||||||   |||||||||||||||||| ||||| || |||   | ||||| ||||||||||||||| |||||||||||||||||||||||| ||    
T  30917969 atattgattttctgagatattaattttcggttctgggacaaacgtgacaattttcttctttcactttagtccttgtgacacctcatactctttgtcaaca 30917870  T
Q  595 taaaacttttgtcacatcatcggttaacata 625  Q
    |||||  |||| ||||||||| |||| ||||    
T  30917869 taaaatctttg-cacatcatcagttagcata 30917840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 390 - 478
Target Start/End: Complemental strand, 330078 - 329990
Alignment:
Q  390 ctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatatt 478  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||  |||||||    
T  330078 ctcccgcaaccacataacaacttcattgaggaagatgacccagttcttgacgaagagcaacacttcgttgggacgagtttgtggatatt 329990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 8048664 - 8048736
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||| |||||    
T  8048664 ggatattaattttcggttcagggaccaaagtgaccattttctactttcactttagtccatgtgacacatcata 8048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 508 - 700
Target Start/End: Original strand, 25621597 - 25621793
Alignment:
Q  508 aggatattaattttcggttcagggactaa---agtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaactttt 604  Q
    ||||||||  ||||||||||||| |||||   ||||  || ||||||||||||||||||||| ||| |||| |||||| | |||| |||||||||  |||    
T  25621597 aggatattggttttcggttcaggaactaattaagtgaccattttctactttcactttagtccttgttacacttcataccccttgtgagcataaaatcttt 25621696  T
Q  605 gtcacatcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaa 700  Q
    | || |||||| |||||| | |||||| || |||||  |||||||| ||||| |||| ||| |||||   ||||  |||||||||||||||| ||||    
T  25621697 gccaaatcatcagttaacaaaattatttaacgtcagtgactaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcctgaatcaa 25621793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 607 - 713
Target Start/End: Original strand, 30924987 - 30925093
Alignment:
Q  607 cacatcatcggttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacct 706  Q
    |||||||||  |||||| ||| || || |||||| ||||||||||||||||||| ||||| |||| ||||   |||||||||||||||| ||||||||||    
T  30924987 cacatcatcacttaacagattttttaacgtcagagactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggacct 30925086  T
Q  707 ttgtgac 713  Q
     ||||||    
T  30925087 atgtgac 30925093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 371 - 695
Target Start/End: Original strand, 8879284 - 8879610
Alignment:
Q  371 cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagttta 470  Q
    |||| |||||| || ||||||||  |||||| |  ||||||||||||||  |||||||  || | ||||| ||||  |||||||  |||||||||||||     
T  8879284 caggaacctaataataagtctcctccaaccaaagaacaacttcattgagctagatgaccgagctcttgacaaagaacaacactttgttgggacgagttt- 8879382  T
Q  471 gggatattgattttcggttca--ggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccat 568  Q
    ||||||||||| ||| ||| |  || ||||||||||||  ||||||  | |||  |||||||||| ||      ||  |||||||||||||||| || ||    
T  8879383 gggatattgatgttcagtttatagggatattgattttcggggatatcgacttttagttcagggaccaacaaaaccatcttctactttcactttactctat 8879482  T
Q  569 gtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatat 667  Q
     |||||||||||| || |||||| |||||||| |||| ||  ||||  |||||| | |||||| || |||||  |||||||| ||||| |||  ||| ||    
T  8879483 atgacacctcatattccttgtcatcataaaacctttgccatctcattagttaacaaaattatttaacgtcagggactaaagtgataacagaaatgcacat 8879582  T
Q  668 tcagtgactacattgtatttaatcctga 695  Q
    ||||  ||||| ||||||||||||||||    
T  8879583 tcaggaactactttgtatttaatcctga 8879610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 42477601 - 42477531
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||| |||| ||||||||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||    
T  42477601 atattagtttttggttcagggaccaaagtgatcattttctactttcactttggtccctgtgacacctcata 42477531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 342 - 485
Target Start/End: Complemental strand, 8878908 - 8878767
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    |||||||||| || ||||| ||||| ||| ||||||| ||| |||| |||||||| ||||||||   | |||||||||| |||||||| || || |||||    
T  8878908 gggacctaac-gacagtaagtatgcacagtcagggacttaataacacgtctcccaaaaccacatattagcttcattgaggaagatgacccaattcttgac 8878810  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttc 485  Q
    |||||| ||||  ||  |||||| |||||||||||||||||||||    
T  8878809 gaagagcaaca--tcgctgggacaagtttagggatattgattttc 8878767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 535 - 623
Target Start/End: Complemental strand, 22621344 - 22621256
Alignment:
Q  535 aaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca 623  Q
    |||||| ||| ||||||||||||||||||||| |||||||| |||| | | ||||||||| ||||| |||||||  ||||| |||||||    
T  22621344 aaagtgatcattttctactttcactttagtccttgtgacacatcatgcgccttgtcagcaaaaaacatttgtcaactcatcagttaaca 22621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 637 - 753
Target Start/End: Complemental strand, 48646163 - 48646047
Alignment:
Q  637 cagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaacc 736  Q
    |||| |||||||| |||||||||| | | | |||| ||||   |||||||||||||||| ||| |||||| ||||||| ||| ||| ||||| ||| |||    
T  48646163 cagagactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcatagtcagggacc 48646064  T
Q  737 aaagtgaccatttactc 753  Q
    |||||||| ||||||||    
T  48646063 aaagtgactatttactc 48646047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 7258496 - 7258426
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  7258496 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 7258426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 509 - 579
Target Start/End: Complemental strand, 32793414 - 32793344
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctca 579  Q
    ||||||| ||||| | ||||||||| ||| || ||| ||| ||||||||||||||||||||||||||||||    
T  32793414 ggatattcatttttgattcagggaccaaaatgatcattttttactttcactttagtccatgtgacacctca 32793344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 48647345 - 48647415
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  48647345 atattgatttttggttcagggacgaaagtgaccattttctactttcactttggtccttgtgacacctcata 48647415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 48788574 - 48788644
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  48788574 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 48788644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 509 - 574
Target Start/End: Complemental strand, 2677159 - 2677094
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgaca 574  Q
    ||||||| |||||  |||||||||  |||||| ||| |||||||||||||||||||||||||||||    
T  2677159 ggatattgatttttagttcagggaacaaagtgatcattttctactttcactttagtccatgtgaca 2677094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 24934889 - 24934800
Alignment:
Q  666 attcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaa 755  Q
    ||||| ||||||  |||||||||||||| | |||  ||||||||||||| |||  || | ||||||| ||||||||||||||||||||||    
T  24934889 attcaatgactattttgtatttaatcctaagtcagagacctttgtgacagcgatatgcagagttagggaccaaagtgaccatttactcaa 24934800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 754
Target Start/End: Complemental strand, 7258384 - 7258272
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| ||||| |||| ||| | |||| ||||   |||||||||||||||| | | |||||| ||||||||||| ||||| ||| ||| ||||||||    
T  7258384 actaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggacctatgtgacaacgaggtgtagagtcagggaccaaagt 7258285  T
Q  742 gaccatttactca 754  Q
    ||| |||| ||||    
T  7258284 gactatttgctca 7258272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 7259585 - 7259656
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||||||||| ||||||||||| ||||||  || |||||| ||||||||| |||| ||||||||||||||    
T  7259585 ggatattaatttttggttcagggaccaaagtgaccattttcta-tttcactttggtccttgtgacacctcata 7259656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 33607394 - 33607466
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||| || |||| ||||||  |||||| ||||||||||||||||||| ||||||||||||    
T  33607394 ggatattgatttttggtccaaggaccaaagtgaccaatttttactttcactttagtccatttgacacctcata 33607466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 605
Target Start/End: Complemental strand, 39824356 - 39824276
Alignment:
Q  525 ttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttg 605  Q
    ||||||| ||||||||  || ||||||||||||||||||||| |||||||| |||| | | ||||||||| ||||| ||||    
T  39824356 ttcaggggctaaagtgaccattttctactttcactttagtccctgtgacacttcatgcaccttgtcagcacaaaacatttg 39824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 43461617 - 43461689
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||  ||||||  || ||| ||||||||||||||| ||||||||||||||||    
T  43461617 ggatattgatttttggttcagggatcaaagtgaccattttttactttcactttagttcatgtgacacctcata 43461689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 509 - 755
Target Start/End: Original strand, 12223579 - 12223826
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||| |||||| |||  ||||||   | ||| ||||||||||||||| | ||||||| ||||||     ||||| | |||||| | |||||    
T  12223579 ggatattgatttttggttcaaggatcaaagtgacaattttttactttcactttagttcctgtgacaactcatatgtcatgtcatcgtaaaacctgtgtca 12223678  T
Q  609 catcatcggttaacata-ttattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    |||||||  |||||| | ||||| ||  ||||  ||||||||||||||||||  ||| | |||| |||| | || ||||||||||||| ||| ||||||     
T  12223679 catcatcacttaacagaattatttaacatcagtgactaaagtaataacggaactgcagagtcagggacttctttatatttaatcctgagtcagggaccta 12223778  T
Q  708 tgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaa 755  Q
    |||||||  || ||| |  || ||| || ||||||||||||| |||||    
T  12223779 tgtgacattgatgtgcagtgtcagggactaaagtgaccattttctcaa 12223826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 681 - 756
Target Start/End: Complemental strand, 21062887 - 21062812
Alignment:
Q  681 tgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaat 756  Q
    ||||||||||||||| |||||||||||| ||||| ||| ||| | ||| ||| || ||||||||||||| ||||||    
T  21062887 tgtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtgaccattttctcaat 21062812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 644 - 726
Target Start/End: Original strand, 7509487 - 7509569
Alignment:
Q  644 taaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtata 726  Q
    ||||||||||||||||| ||| | || | |||| | || ||||||||| ||| |||| ||||||||||||||||| |||||||    
T  7509487 taaagtaataacggaagtgcagaatctgagacttctttatatttaatcatgaatcaaagacctttgtgacaacgaggtgtata 7509569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 8375503 - 8375569
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| |||| |||||||||||||  || ||||||||||||||||||||  ||||||||    
T  8375503 ggatattgatttttggtttagggactaaagtgaccattttctactttcactttagtctctgtgacac 8375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 760
Target Start/End: Original strand, 10899087 - 10899205
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| ||| | |||| ||||   |||||||||||||||  ||||||| || ||||||| ||| ||| | ||| ||| ||||||||    
T  10899087 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaaggatctatgtgacagcgaggtgcagagtcagggaccaaagt 10899186  T
Q  742 gaccatttactcaattttt 760  Q
     || ||||||||| |||||    
T  10899187 aacaatttactcatttttt 10899205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 35728988 - 35729058
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||||| | ||||||||||    
T  35728988 atattgatttttggttcagggaccaaagtgaccactttctactttcactttggtccatataacacctcata 35729058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 44333358 - 44333288
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || ||||||||||||| || |||| ||||||||||||||    
T  44333358 atattgatttttggttcagggaccaaagtgaccattttctactttcacgttggtccctgtgacacctcata 44333288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 517 - 578
Target Start/End: Complemental strand, 10894558 - 10894497
Alignment:
Q  517 attttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctc 578  Q
    ||||| ||| ||||||||||||||  || |||||||||||||||| || |||||||||||||    
T  10894558 atttttggtccagggactaaagtgaccattttctactttcactttggtgcatgtgacacctc 10894497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 511 - 575
Target Start/End: Complemental strand, 24935018 - 24934954
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||| |||||||||| |||||  ||||||  || ||||||||||||||||||| ||||||||||    
T  24935018 atattgattttcggtttagggatcaaagtgaccattttctactttcactttagttcatgtgacac 24934954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 545 - 660
Target Start/End: Original strand, 34888839 - 34888955
Alignment:
Q  545 atttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaac 643  Q
    ||||||| ||||||| |||||||||||||||||||||  || | ||| | |||||| | |||||| |||||  ||||||| |||||| || ||||   ||    
T  34888839 atttctaatttcactgtagtccatgtgacacctcatatgctatatcatcgtaaaacctatgtcacgtcatcacttaacataattattaaacgtcaaggac 34888938  T
Q  644 taaagtaataacggaag 660  Q
    |||||| ||||||||||    
T  34888939 taaagtgataacggaag 34888955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 44334350 - 44334422
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| |||||| |||| ||||||   | |||||||||||||||| |||||||||||| ||||||    
T  44334350 ggatattgatttttggttcatggaccaaagtgactattttctactttcactttggtccatgtgacatctcata 44334422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 580
Target Start/End: Original strand, 385529 - 385600
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||||| | ||||||||||||||||||||||  || ||||||||| ||||||| ||| | ||||| |||||    
T  385529 ggatattgactttcggttcagggactaaagtgaccattttctacttgcactttaatccctatgacatctcat 385600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 580
Target Start/End: Original strand, 2677720 - 2677755
Alignment:
Q  545 atttctactttcactttagtccatgtgacacctcat 580  Q
    |||||||||||||||||||||| |||||||||||||    
T  2677720 atttctactttcactttagtccttgtgacacctcat 2677755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 509 - 560
Target Start/End: Original strand, 44530517 - 44530568
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactt 560  Q
    ||||||||||||| ||||||||||||||||||  || ||| |||||||||||    
T  44530517 ggatattaatttttggttcagggactaaagtgaccagtttttactttcactt 44530568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 10898975 - 10899045
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||| ||||||  || ||||||||||| |||| |||| ||||||||||||||    
T  10898975 atattgatttttggttcaaggaccaaagtgaccattttctactttctctttggtccctgtgacacctcata 10899045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 657 - 762
Target Start/End: Original strand, 385640 - 385745
Alignment:
Q  657 gaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaat 756  Q
    |||| |||||||||   ||||| ||||||| |||| ||| | | |||||| |||||||||||  || | ||| | | ||||||||||||||||||||||     
T  385640 gaagtgcatattcataaactactttgtattcaatcatgagttagggacctctgtgacaacgagatgcagagtcaaggaccaaagtgaccatttactcaaa 385739  T
Q  757 ttttat 762  Q
    ||||||    
T  385740 ttttat 385745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 1e-87; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 32 - 348
Target Start/End: Original strand, 24745440 - 24745761
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaa 131  Q
    ||||||||||||||  ||||||| |||| ||||||||| ||||| || |||||||||||||||||||||| ||||||| ||||||||| | |||||||||    
T  24745440 aaatgcacatgctctaataaatagactatgacaatatttgtaaataatcaattgaagtttagttgaatatatattcttgaagctaatagtctttcttaaa 24745539  T
Q  132 aaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaatt---caagatat--acaaatacaaaatttggaaaaatgt 226  Q
    |||||||| | || ||||| || |||||||| |||||||||||||||||||||  |||||||   ||||||||  ||||||||| |||||||||||||||    
T  24745540 aaatgaaatagtacaatttaaaattaacattgagattaaaaagaagaaaccataaaggaattattcaagatatatacaaatacagaatttggaaaaatgt 24745639  T
Q  227 gattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgt 326  Q
    |||||||||| | | || ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  24745640 gattcataactagaccttaaagcctgagacaattcttcatattgctagaattgataaattgatataaaaaaggatcatagtaggcatactttgtgcctgt 24745739  T
Q  327 aagggtttactatttgggacct 348  Q
    ||| || |||| || |||||||    
T  24745740 aagtgtctactgttagggacct 24745761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 323 - 705
Target Start/End: Complemental strand, 21622253 - 21621869
Alignment:
Q  323 ctgtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaa 421  Q
    ||||||| ||||| | || | ||||||||||||||||| ||||| ||| ||| |||||||||  ||||| ||| ||| ||||| ||||||||||| || |    
T  21622253 ctgtaagtgtttattgttagagacctaactgatagtaagtatgcacagtcagagacctaacat-aagtcacccgcaatcacataacaacttcattaagga 21622155  T
Q  422 agatgactcagtttttgacgaagagaaacacttccttgg-gacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattt 520  Q
    ||||||   |||| || |||||||| |||| ||| || | | ||||||| ||||||||||||||||||| ||| ||||||||||||  |||||||  |||    
T  21622154 agatgatctagttcttaacgaagagcaacatttcatttgagccgagtttggggatattgattttcggtttagggatattgattttcggggatattggttt 21622055  T
Q  521 tcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggtta 620  Q
    | |||||||| |  ||||||  || ||| ||||||||||||||| | |||||||| |||||||| | |||||| |||||  |||||||||||||| ||||    
T  21622054 ttggttcaggaatcaaagtgaccattttatactttcactttagtgcttgtgacacatcatactcctcgtcagcgtaaaatctttgtcacatcatcagtta 21621955  T
Q  621 acat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacc 705  Q
    |||| |||||| ||  ||||  |||||||| |||||||||| ||| ||||| ||||||  |||||||||||||||| ||| |||||    
T  21621954 acataattatttaacatcagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtcagggacc 21621869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 325 - 611
Target Start/End: Original strand, 24745770 - 24746057
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaag 423  Q
    ||||| ||||||| |  ||||||||||||||||||| ||| | ||| ||||||||||||| ||| ||||| |||| ||||| |||||||||||||| |||    
T  24745770 gtaagtgtttactgtcagggacctaactgatagtaattatacacagtcagggacctaacagcaaatctccaacaagcacataacaacttcattgaggaag 24745869  T
Q  424 atgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttc-ggttcaggaatattgattttcaaggatattaattttc 522  Q
    ||||| || || ||| ||||| | |||||||  |||| |||||||| || ||||| |||||  |||||||| |||||||||||   |||||||||||| |    
T  24745870 atgacccaattcttgtcgaagtgcaacactttgttgg-acgagtttgggaatattaattttttggttcagggatattgattttttgggatattaatttcc 24745968  T
Q  523 ggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacat 611  Q
    ||||||||||| |||||| | | |||||| |||||||||||||  ||||||||||||| ||||||  ||||||||||||||||||||||    
T  24745969 ggttcagggaccaaagtgataattttctattttcactttagtctgtgtgacacctcattctcttttccagcataaaacttttgtcacat 24746057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 164 - 335
Target Start/End: Original strand, 24753077 - 24753248
Alignment:
Q  164 agattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattctt 263  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||| ||||||||||||||||||||||||| | | || |||||   |||| ||||||    
T  24753077 agattaaaaagaagaaatcataaaggaattcaagataaacaaatacagaatttggaaaaatgtgattcataactagacctcaaagctcaaaacaattctt 24753176  T
Q  264 catattgctagaattgataaattgatataaaataggattatagtaggcctactttgtgcctgtaagggttta 335  Q
    ||||||||||||| |||||||||||| | ||| ||||| |||||||| |||||||||||||||||| |||||    
T  24753177 catattgctagaaatgataaattgatttgaaaaaggatcatagtaggtctactttgtgcctgtaagtgttta 24753248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 492 - 718
Target Start/End: Original strand, 21622980 - 21623207
Alignment:
Q  492 ggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtca 591  Q
    ||||||||||||||| |||| ||| ||||||||||||  ||  ||||||  || |||||||||||| |||||||  ||||||||||||||||| ||||||    
T  21622980 ggaatattgattttcgaggagattgattttcggttcatagagcaaagtgaccattttctactttcattttagtctctgtgacacctcatactccttgtca 21623079  T
Q  592 gcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaat 690  Q
    | ||||||||| || ||||||||  |||||||| |||||| || ||| |  |||||||| ||||| |||| ||| |||||  |||||  |||||||||||    
T  21623080 gtataaaacttgtgccacatcattagttaacataattatttaacgtcggggactaaagtgataacagaagtgcacattcaaggactattttgtatttaat 21623179  T
Q  691 cctgattcaaggacctttgtgacaacga 718  Q
    ||||| ||| ||| | ||||||||||||    
T  21623180 cctgaatcagggaacattgtgacaacga 21623207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 24752933 - 24753065
Alignment:
Q  48 ataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaaaaatgaaacaatataa 147  Q
    ||||||| |||| ||||||||| ||||| ||  ||||||| ||||||||||||| ||||||  ||||||||||| ||||||| ||||||||| | |||||    
T  24752933 ataaatagactaggacaatatttgtaaataattaattgaactttagttgaatatctattctagaagctaataatctttcttagaaaatgaaatagtataa 24753032  T
Q  148 tttgaagttaacattaagattaaaaagaagaaa 180  Q
    ||||||||||||||| |||||||||||||||||    
T  24753033 tttgaagttaacattgagattaaaaagaagaaa 24753065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 550 - 695
Target Start/End: Original strand, 32244609 - 32244755
Alignment:
Q  550 tactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaactaaag 648  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | |||||| || |||||  |||||||    
T  32244609 tactttcactttagtcactgtgacacctcatactccttgtcagcataaaatctttgtcacgtcatcggttaacaaaattatttaacgtcagggactaaag 32244708  T
Q  649 taataacggaagcgcatattcagtgactacattgtatttaatcctga 695  Q
    | |||||||| | ||| |||||  |||||| |||| |||||||||||    
T  32244709 tgataacggatgtgcacattcaaggactactttgtctttaatcctga 32244755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 510 - 714
Target Start/End: Complemental strand, 2786465 - 2786258
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcac 609  Q
    |||||| ||||||||||||| ||| ||||||  || |||||||||| |||||| ||||| |||||| ||||||||||||| |||||| ||  ||||||||    
T  2786465 gatattgattttcggttcagagaccaaagtgaccattttctacttttactttaatccatatgacacttcatactctttgtgagcatacaatctttgtcac 2786366  T
Q  610 atcatcggttaacata-ttattcaatgtca-ga-aactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacct 706  Q
    || ||| ||||||| | ||||| || |||| || ||||||| | |||||||||| ||| |||||  || ||  |||||||||||||||| ||| | ||||    
T  2786365 attatcagttaacaaaattatttaacgtcatgataactaaaatgataacggaagtgcacattcaaggagtaatttgtatttaatcctgagtcatgaacct 2786266  T
Q  707 ttgtgaca 714  Q
    ||||||||    
T  2786265 ttgtgaca 2786258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 495 - 693
Target Start/End: Complemental strand, 32244531 - 32244332
Alignment:
Q  495 atattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagca 594  Q
    |||||||||||| |||||||| ||||||||| ||| ||  ||||||  || ||| ||||||||||||||||  ||||||||| |||||||||||||||||    
T  32244531 atattgattttcgaggatattgattttcggtgcagagatcaaagtgaccattttttactttcactttagtctctgtgacaccccatactctttgtcagca 32244432  T
Q  595 taaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcct 693  Q
    |||||| || ||| | |||||  ||||||| |||||| || || |   || ||||| |||||||||| ||| ||| | ||||||| |||| |||||||||    
T  32244431 taaaaccttcgtcgcgtcatcacttaacataattatttaacgttatggaccaaagtgataacggaagtgcacatttaatgactactttgtctttaatcct 32244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 325 - 623
Target Start/End: Original strand, 24753270 - 24753555
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaag 423  Q
    ||||| ||||||| |  ||||||||||||||||||| ||||| ||| ||||||||| |||| ||||||||  |||||| |  ||||||||||| || |||    
T  24753270 gtaagtgtttactgtcagggacctaactgatagtaattatgcacagtcagggacctcacaaaaagtctccagcaaccatagaacaacttcattaaggaag 24753369  T
Q  424 atgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcg 523  Q
    ||  | || || ||||||||||  | |||||| ||||||||||||| | ||||||| ||||             | ||  |||| |||||||||||||||    
T  24753370 attgcccaattcttgacgaagatcagcacttcgttgggacgagtttggagatattggtttt-------------tcga--ttcagggatattaattttcg 24753454  T
Q  524 gttcagggactaaagtggtcaa--tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaa 621  Q
     || || ||||||||| | |||  ||| ||||||||||||||||   |||||||||||  ||||||| |||||||||||||||| ||||||||| |||||    
T  24753455 atttagagactaaagt-gacaatttttttactttcactttagtctccgtgacacctcaatctctttgacagcataaaacttttgccacatcatcagttaa 24753553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 509 - 599
Target Start/End: Complemental strand, 6039364 - 6039274
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaa 599  Q
    ||||||||||||||||||||||||  ||||||  || |||||||  ||||||| |||| | ||||||||||||||| ||||||||||||||    
T  6039364 ggatattaattttcggttcagggagcaaagtgaccattttctacactcactttggtccctatgacacctcatactcattgtcagcataaaa 6039274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 510 - 578
Target Start/End: Original strand, 42391787 - 42391855
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctc 578  Q
    ||||| ||||||  |||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  42391787 gatatgaatttttagttcagggactaaagtgaccattttctactttcactttagtccatgtgacacctc 42391855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 19050479 - 19050407
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| | |||| |||| |||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  19050479 ggatattgatttttgcttcaaggaccaaagtgatcattttatactttcactttagtccatgtgacacctcata 19050407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 642 - 757
Target Start/End: Original strand, 53771063 - 53771178
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| ||| | |||| | || | ||||||||||| |||| ||| |||||| ||||||||||| ||| | ||| ||| || |||||    
T  53771063 actaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaagt 53771162  T
Q  742 gaccatttactcaatt 757  Q
    |||||||| |||||||    
T  53771163 gaccatttgctcaatt 53771178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 20599788 - 20599858
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||||||| ||||||||||| ||||||  || ||| |||||||| |||||||| ||||||||||||||    
T  20599788 atattaatttttggttcagggaccaaagtgaccattttttactttcattttagtccctgtgacacctcata 20599858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 42278272 - 42278200
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||| ||||||  || |||||| ||||||||| |||| ||||||||||||||    
T  42278272 ggatattgatttttggttcagggaccaaagtgaccattttctagtttcactttggtccctgtgacacctcata 42278200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 511 - 714
Target Start/End: Original strand, 26172822 - 26173028
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcaca 610  Q
    ||||| ||||| | |||||| ||||||||| | | |||||||| |||||||||||  ||||||||||||||||| ||||   |||||||| | || ||||    
T  26172822 atattgatttttgattcaggaactaaagtgattattttctactgtcactttagtcattgtgacacctcatactccttgttgacataaaacatgtgccaca 26172921  T
Q  611 tcat--cggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    | ||  |  ||||||| ||| || || | ||   |||||||| |||||||||| ||| | |||| ||||   |||||||||||| ||| |||||||||||    
T  26172922 ttatcacttttaacataattttttaacggcatggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcaaggacctt 26173021  T
Q  708 tgtgaca 714  Q
    | |||||    
T  26173022 tctgaca 26173028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 398 - 492
Target Start/End: Complemental strand, 2786561 - 2786467
Alignment:
Q  398 accacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcag 492  Q
    ||||||| ||||||| |||||| |||||||| ||  | ||||||||||  |||||||| ||||||| | || | ||||||||||||||| |||||    
T  2786561 accacataacaactttattgaggaagatgacccaactgttgacgaagaacaacacttcgttgggacaaattcatggatattgattttcgattcag 2786467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 660
Target Start/End: Complemental strand, 39869161 - 39869011
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcaca 610  Q
    |||||||||||  | |||||||||||||||   | ||| |||||||| |||||||  |||||||||| |||     ||||| |||||||  | |||||||    
T  39869161 atattaatttttagatcagggactaaagtgactattttatactttcaatttagtcattgtgacacctgatatgtcatgtcatcataaaatatgtgtcaca 39869062  T
Q  611 tcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaag 660  Q
    |||||  ||||||| |||||| || |||||| |||||||| ||||||||||    
T  39869061 tcatcacttaacataattatttaacgtcagagactaaagtgataacggaag 39869011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 47878386 - 47878456
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| | ||||||||||||    
T  47878386 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctatgacacctcata 47878456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 680 - 749
Target Start/End: Complemental strand, 11269961 - 11269892
Alignment:
Q  680 ttgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
    |||||||||| ||||| |||  ||||||||||||||||| ||||| |||||   ||||||||||||||||    
T  11269961 ttgtatttaaccctgaatcatagacctttgtgacaacgaggtgtaaagttaaagaccaaagtgaccattt 11269892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 508 - 580
Target Start/End: Complemental strand, 4702007 - 4701935
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    |||||||| | ||| | ||||||||| ||||||   | |||||||||||||||||||||||||||||| ||||    
T  4702007 aggatattgacttttgtttcagggaccaaagtgactattttctactttcactttagtccatgtgacacttcat 4701935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 550 - 580
Target Start/End: Original strand, 25810354 - 25810384
Alignment:
Q  550 tactttcactttagtccatgtgacacctcat 580  Q
    |||||||||||||||||||||||||||||||    
T  25810354 tactttcactttagtccatgtgacacctcat 25810384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 573 - 615
Target Start/End: Complemental strand, 26170819 - 26170777
Alignment:
Q  573 cacctcatactctttgtcagcataaaacttttgtcacatcatc 615  Q
    |||||||||||| ||||||||||||||| | ||||||||||||    
T  26170819 cacctcatactccttgtcagcataaaacatgtgtcacatcatc 26170777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 757 - 811
Target Start/End: Complemental strand, 38393983 - 38393929
Alignment:
Q  757 ttttatgtctaaataaaaagatacacacttattaactttgaccttaatattttta 811  Q
    |||| |||| ||||||||||| | ||||||||||| || ||||||||||||||||    
T  38393983 ttttttgtcaaaataaaaagacatacacttattaagttagaccttaatattttta 38393929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 21622855 - 21622955
Alignment:
Q  343 ggacctaactgatagtaactatgctc-agcagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacg 441  Q
    |||||||||||||||||| ||||| | | || ||||||   |||||||||||  ||||||||  ||||||||||||||  ||||||| ||||| |||||     
T  21622855 ggacctaactgatagtaagtatgcacaatcatggacct---aacaagtctcctgcaaccacaaaacaacttcattgaggtagatgacccagttcttgaca 21622951  T
Q  442 aaga 445  Q
    ||||    
T  21622952 aaga 21622955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 819
Target Start/End: Complemental strand, 25155940 - 25155899
Alignment:
Q  778 tacacacttattaactttgaccttaatatttttaggttggtc 819  Q
    |||||||||  |||||| ||||||||||||||||||||||||    
T  25155940 tacacactttataacttagaccttaatatttttaggttggtc 25155899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 719
Target Start/End: Original strand, 25810389 - 25810504
Alignment:
Q  605 gtcacatcatcggttaacata--ttattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaagg 702  Q
    ||||||||||| ||||||| |  ||||| || |||||| |||||||| ||| |||||| ||| |||||  | |||| |||||||||||| ||| | | ||    
T  25810389 gtcacatcatcagttaacagaagttatt-aacgtcagagactaaagtgatagcggaagtgcacattcataggctactttgtatttaatcttgaatgaggg 25810487  T
Q  703 acctttgtgacaacgaa 719  Q
    |||||| ||||||||||    
T  25810488 acctttatgacaacgaa 25810504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 42278421 - 42278368
Alignment:
Q  331 gtttactatttgggacctaactgatagtaactatgctcag-cagggacctaaca 383  Q
    |||||||||  ||||||||||||||||||| |||||| || |||||||||||||    
T  42278421 gtttactatcagggacctaactgatagtaaatatgcttagtcagggacctaaca 42278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 755 - 832
Target Start/End: Complemental strand, 49354383 - 49354306
Alignment:
Q  755 atttttatgtctaaataaaaagatacacacttattaactttgaccttaatatttttaggttggtccaagttaacaacc 832  Q
    ||||||||||| ||||||||||| ||||||||  ||| || ||| ||||| ||| |||||||| | |||||| |||||    
T  49354383 atttttatgtccaaataaaaagaaacacacttgctaatttagacattaatgtttataggttggactaagttagcaacc 49354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 6e-80; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 89 - 455
Target Start/End: Original strand, 23772931 - 23773298
Alignment:
Q  89 tttagttgaatatgtattcttaaagctaataatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggag 188  Q
    |||||||||||||||||| || |||| |||||| ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| ||    
T  23772931 tttagttgaatatgtatttttgaagcaaataatctttcttaaaaaatgaaatagtataatttgaagttaacattgagattaaaaagaagaaaccatgaag 23773030  T
Q  189 gaattcaagatatacaaatacaaaatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattga 288  Q
     ||||||||||||||||||||| ||||| ||||||||||||||||||||| | |  ||| ||| |||  |||||||||||||||||||||||||||||||    
T  23773031 aaattcaagatatacaaatacagaatttagaaaaatgtgattcataaccagaccacaaaacctaaaataattcttcatattgctagaattgataaattga 23773130  T
Q  289 tataaaataggattatagtaggcctactttgtgcctgtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaa 387  Q
    ||||| ||||||| ||||||| |||||||||||| |||||   |||||  |    ||||||||| |||||||  ||||  || |||||||||||||| ||    
T  23773131 tataagataggatcatagtagacctactttgtgcttgtaaatctttacagtcatagacctaactaatagtaagcatgcatagtcagggacctaacaataa 23773230  T
Q  388 gtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttc 455  Q
    |||| |  ||||||||  | || ||||||||| ||||||||  |||| ||||| | ||| ||||||||    
T  23773231 gtcttctgcaaccacaaaataatttcattgaggaagatgacctagttcttgacaaggagcaacacttc 23773298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 102 - 328
Target Start/End: Original strand, 28864741 - 28864969
Alignment:
Q  102 gtattcttaaagctaataatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatat 201  Q
    |||||||| ||||||||||| | | ||||||||||||| | ||| |||||||||||||||| | |||||||||||||||||| | | |||||||||||||    
T  28864741 gtattcttgaagctaataatctcttttaaaaaatgaaatagtatgatttgaagttaacattgaaattaaaaagaagaaaccaagaacgaattcaagatat 28864840  T
Q  202 acaaatacaaaatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttc--atattgctagaattgataaattgatataaaatagg 299  Q
    ||||||||| ||||||| |||||| ||||||||| || | |||||||||| |||| |||||||  ||||||||||||||||||||||||||||||| |||    
T  28864841 acaaatacataatttgggaaaatgcgattcataatcagacctgaaagcctaaaacaattcttcatatattgctagaattgataaattgatataaaaaagg 28864940  T
Q  300 attatagtaggcctactttgtgcctgtaa 328  Q
    || |||||||| ||||||||||| |||||    
T  28864941 atcatagtaggtctactttgtgcttgtaa 28864969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 347 - 623
Target Start/End: Original strand, 35538023 - 35538295
Alignment:
Q  347 ctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaaga 445  Q
    |||||| ||||||| ||||| ||| ||| || || ||| |||||||| | ||||||||  |||||||  ||| | ||||||||||||||||| | || ||    
T  35538023 ctaactcatagtaaatatgcacagtcagtgatcttacatcaagtctctcgcaaccacagaacaactttgttgtggaagatgactcagtttttaatgacga 35538122  T
Q  446 gaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaa 545  Q
    | |||||||   |||||| ||||| |||||||||||||||  || | | ||||||||||||| |||||||| ||||||||||||  || |||||| | |     
T  35538123 gcaacactt---tgggacaagttt-gggatattgattttcaatttatggatattgattttcagggatatta-ttttcggttcagaaacgaaagtgataat 35538217  T
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca 623  Q
    ||||||||||||||||||||  |||||||||||||||||||| | |||||||||  |||||| ||||||| |||||||    
T  35538218 tttctactttcactttagtctttgtgacacctcatactctttcttagcataaaatgtttgtcgcatcatcagttaaca 35538295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 342 - 622
Target Start/End: Original strand, 28865015 - 28865291
Alignment:
Q  342 gggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    ||||| |||||||| |||| |||||  || ||| ||||||||| |||||||||| ||||||||  |||||||||| ||| ||||||| |||||| || |     
T  28865015 gggacgtaactgatggtaagtatgcatagacagagacctaacagcaagtctcccgcaaccacaaaacaacttcatcgaggaagatgagtcagttctttaa 28865114  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtg 540  Q
     ||||| |||||||| ||| |||||||||  ||||||| |||||||| |||  |||||| ||||||  ||||||| |||||||||| |||||   |||||    
T  28865115 aaagagcaacacttcgttgagacgagtttgaggatattaattttcggatcaa-aatattaattttcggggatattgattttcggttaaggga---aagtg 28865210  T
Q  541 gtcaatttctactttcactttagtccatgtgacacctcatactc-tttgtcagcataaaacttttgtcacatcatcggttaac 622  Q
       | |||| ||||||| |||   |||||||||||||||||| | ||| |||||||||||||||||||||  |||||||||||    
T  28865211 acaattttcaactttcaatttg--ccatgtgacacctcatacccctttttcagcataaaacttttgtcacgccatcggttaac 28865291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 347 - 506
Target Start/End: Original strand, 23773301 - 23773461
Alignment:
Q  347 ctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaaga 445  Q
    |||||| ||||||| ||||| ||| |||||||||||||| |||| |||| ||||||||  |||| ||||||||| ||||||||  |||| |||| |||||    
T  23773301 ctaactaatagtaagtatgcacagtcagggacctaacaataagtatcccgcaaccacaaaacaatttcattgagcaagatgacatagttcttgatgaaga 23773400  T
Q  446 gaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttc 506  Q
    | |||||||| ||| ||||| |||  |||||||||||||| ||||||| ||||| ||||||    
T  23773401 gcaacacttcgttgtgacgattttgaggatattgattttcagttcagggatattaattttc 23773461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 546 - 625
Target Start/End: Original strand, 32555463 - 32555542
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata 625  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||  ||||||||    
T  32555463 tttctactttcactttagtccatgtgacacctcatactccttgtcagcataaaacctttgtcatatcatcaattaacata 32555542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 525 - 749
Target Start/End: Original strand, 9537945 - 9538170
Alignment:
Q  525 ttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat 624  Q
    ||||||||| ||||||  || ||| ||||||||||||||||||||||| || |||||     | ||| | |||||| | |||||||| |||  |||||||    
T  9537945 ttcagggaccaaagtgaccattttatactttcactttagtccatgtgaaacatcatatgtcatatcatcgtaaaacatgtgtcacataatcacttaacat 9538044  T
Q  625 a-ttattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgt 723  Q
    | ||||| ||  ||||| |||||| | |||||||||| ||| | |||| |||| | |||||||||||||||| ||| |||||| | |||||||||  ||     
T  9538045 aattatttaacatcagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctatatgacaacgagatgc 9538144  T
Q  724 atagttaggaaccaaagtgaccattt 749  Q
    | ||| ||| ||||||||||| ||||    
T  9538145 agagtcagggaccaaagtgactattt 9538170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 509 - 625
Target Start/End: Complemental strand, 34173503 - 34173387
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||| ||||||| ||| |||||| ||| |||||||||||| |||||||| ||||| |||| || | | ||||||||| ||||| |||||||    
T  34173503 ggatattgatttttggttcagagaccaaagtgatcattttctactttcagtttagtccctgtgataccttatgcaccttgtcagcacaaaacatttgtca 34173404  T
Q  609 catcatcggttaacata 625  Q
    | ||||| |||| ||||    
T  34173403 cctcatcagttagcata 34173387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 509 - 597
Target Start/End: Original strand, 13651041 - 13651134
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgaca-----cctcatactctttgtcagcataa 597  Q
    ||||||| ||||||||||||||||||||||||  || ||| ||||||||||||||||| |||||||     | |||||||| ||||||||||||    
T  13651041 ggatattgattttcggttcagggactaaagtgaccattttttactttcactttagtccctgtgacatgtcacgtcatactccttgtcagcataa 13651134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 625 - 754
Target Start/End: Complemental strand, 16611854 - 16611725
Alignment:
Q  625 attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgta 724  Q
    |||||| || |||||| |||||||| |||||||||| ||||| |||| | || | |||||||||||||||| |||  ||||| ||||||| ||| |||||    
T  16611854 attatttaacgtcagagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgta 16611755  T
Q  725 tagttaggaaccaaagtgaccatttactca 754  Q
     ||| | |||  ||||||||||||| ||||    
T  16611754 gagtcaagaattaaagtgaccatttgctca 16611725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 511 - 580
Target Start/End: Complemental strand, 37072799 - 37072730
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||| ||||||||||||||||||||||||   | |||||||||||| ||| ||||||||||||||||||    
T  37072799 atattgattttcggttcagggactaaagtgactattttctactttcattttggtccatgtgacacctcat 37072730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 2464892 - 2464820
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  2464892 ggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 2464820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 509 - 580
Target Start/End: Original strand, 578652 - 578723
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||||| ||||||||||||||||| |||||| ||| | | |||||||| |||||||||||| |||||||||    
T  578652 ggatattgattttcggttcagggaccaaagtgatcattctttactttcattttagtccatgtcacacctcat 578723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 8075735 - 8075805
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| |||||| ||| |||| ||||||||||| |||| ||||||||||||||    
T  8075735 atattgatttttggttcagggaccaaagtgatcattttcgactttcactttggtccttgtgacacctcata 8075805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 19271679 - 19271777
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    |||||| |||||||||| |||||  ||| || ||| ||||||||||||||||||||||| ||| ||||||| | | |||| |||| ||||| |||||||    
T  19271679 gatattgattttcggtttagggatcaaaatgatcattttctactttcactttagtccatatgatacctcatgcaccttgttagcacaaaacatttgtca 19271777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 691
Target Start/End: Original strand, 30970502 - 30970648
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca-tattattcaatgtcagaaact 644  Q
    |||||||||| |||||||| | ||||| || |||||     |||||||||||||| |||||||| |||||||||||||  |||||| ||||| ||  |||    
T  30970502 tttctacttttactttagttcttgtgatacatcatatgtcatgtcagcataaaacatttgtcacgtcatcggttaacagaattatttaatgttagggact 30970601  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatc 691  Q
    ||||| ||||| |||  ||| ||||| ||| ||| ||||||||||||    
T  30970602 aaagtgataacagaaatgcacattcaatgattactttgtatttaatc 30970648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 28864632 - 28864704
Alignment:
Q  32 aaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgta 104  Q
    ||||| ||||||||  ||||||||| || ||||||||| ||||| || ||||||||||| |||||||||||||    
T  28864632 aaatgaacatgctcatataaatataataggacaatatttgtaaataatcaattgaagttcagttgaatatgta 28864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 518 - 581
Target Start/End: Original strand, 28591022 - 28591085
Alignment:
Q  518 ttttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  28591022 tttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 28591085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 8074671 - 8074601
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| || | ||||||||||||||    
T  8074671 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtacctgtgacacctcata 8074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 14891049 - 14891119
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| | ||||||||||||||||  || |||||||| ||||||| |||| ||||||||||||||    
T  14891049 atattgatttttgattcagggactaaagtgaccattttctactatcactttggtccttgtgacacctcata 14891119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 25590651 - 25590581
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||| ||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  25590651 atattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 25590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 40611481 - 40611411
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||||||||  |||||  || |||||||||||||||| |||| ||||||||||||||    
T  40611481 atattgatttttggttcagggacccaagtgaccattttctactttcactttggtccctgtgacacctcata 40611411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 40612561 - 40612631
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| |||||   || |||||||||||||||| |||| ||||||||||||||    
T  40612561 atattgatttttggttcagggaccaaagtaaccattttctactttcactttggtccttgtgacacctcata 40612631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 668 - 753
Target Start/End: Complemental strand, 18400273 - 18400188
Alignment:
Q  668 tcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactc 753  Q
    ||||||||| | || ||||||||||||| |||||||||| |||||||  || ||| | ||| ||| || |||||||||||||||||    
T  18400273 tcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtgaccatttactc 18400188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 516 - 625
Target Start/End: Complemental strand, 19271578 - 19271469
Alignment:
Q  516 aattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatc 615  Q
    ||||||| |||||||||||||||||   | ||||||||||||||||||||| | | ||||||||| | | |||| |||  ||||| || ||||| ||||     
T  19271578 aattttcagttcagggactaaagtgacaattttctactttcactttagtccttctaacacctcatgcaccttgttagcccaaaacattggtcacctcatt 19271479  T
Q  616 ggttaacata 625  Q
     |||||||||    
T  19271478 agttaacata 19271469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 762 - 831
Target Start/End: Complemental strand, 40383773 - 40383705
Alignment:
Q  762 tgtctaaataaaaagatacacacttattaactttgaccttaatatttttaggttggtccaagttaacaac 831  Q
    |||||||||||||| ||||||||||  |||||| | ||||||| |||||||||||||| |||||| ||||    
T  40383773 tgtctaaataaaaa-atacacacttgctaacttagtccttaatgtttttaggttggtctaagttagcaac 40383705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 744
Target Start/End: Complemental strand, 544767 - 544657
Alignment:
Q  632 aatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttag 731  Q
    |||||||||||||||| | |||||||||| ||| | |||||||||   |||||||||||||||| |||  ||||| | |||| |||||||| | ||| ||    
T  544767 aatgtcagaaactaaatttataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtcagagacctatctgac-acgaagtgcagagtcag 544669  T
Q  732 gaaccaaagtgac 744  Q
    | |||||||||||    
T  544668 g-accaaagtgac 544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 16611931 - 16611875
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtc 565  Q
    ||||||| ||||| |||||||||| ||||||| ||| ||||||| ||||||||||||    
T  16611931 ggatattgatttttggttcagggattaaagtgatcattttctacattcactttagtc 16611875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 577
Target Start/End: Complemental strand, 18400396 - 18400353
Alignment:
Q  534 taaagtggtcaatttctactttcactttagtccatgtgacacct 577  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||    
T  18400396 taaagtggtcattttctactttcgctttactccatgtgacacct 18400353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 597
Target Start/End: Complemental strand, 21069495 - 21069444
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataa 597  Q
    ||||||||||||||||| ||||| |||||| |||||||| |||||| |||||    
T  21069495 tttctactttcactttaatccatatgacacgtcatactccttgtcaacataa 21069444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 600
Target Start/End: Original strand, 23773477 - 23773508
Alignment:
Q  569 gtgacacctcatactctttgtcagcataaaac 600  Q
    ||||||||||||||||||||||||||||||||    
T  23773477 gtgacacctcatactctttgtcagcataaaac 23773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 545938 - 546008
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||| ||||||   | |||||||||||||||| |||| ||||||||||||||    
T  545938 atattgatttttggttcaaggaccaaagtgactattttctactttcactttggtccttgtgacacctcata 546008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 4593081 - 4593012
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| |||| |||||||||    
T  4593081 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtg-cacctcata 4593012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 14889990 - 14889920
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||| ||||| |||| | ||||||||||||    
T  14889990 atattgatttttggttcagggaccaaagtgaccattttctacttttactttggtccctatgacacctcata 14889920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 31946933 - 31946991
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtcca 567  Q
    ||||||| ||||||| ||||||||| ||||||  || ||| ||||||||||||||||||    
T  31946933 ggatattgattttcgattcagggaccaaagtgaccattttttactttcactttagtcca 31946991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 577
Target Start/End: Complemental strand, 32640509 - 32640443
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacct 577  Q
    ||||| ||||| |||||| |||| ||||||  || |||||||||||||||| |||| ||||||||||    
T  32640509 atattgatttttggttcaaggaccaaagtgaccattttctactttcactttggtccctgtgacacct 32640443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 508 - 589
Target Start/End: Complemental strand, 19183185 - 19183104
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgt 589  Q
    |||||||| ||||||| ||||| ||  |||||   || ||| ||||||||||||||||||| |||||| |||||||| ||||    
T  19183185 aggatattgattttcgattcagagagcaaagtcaccattttttactttcactttagtccatatgacacgtcatactccttgt 19183104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 9e-79; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 80 - 321
Target Start/End: Complemental strand, 44720050 - 44719809
Alignment:
Q  80 caattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaa 179  Q
    |||||||||||| |||||||  |||||||| ||||||||||| ||||||| ||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  44720050 caattgaagtttggttgaattggtattcttgaagctaataatctttcttataaaatgaaatagtataatttgaagttaacatcgagattaaaaagaagaa 44719951  T
Q  180 accatggaggaattcaagatatacaaatacaaaatttggaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattg 279  Q
    || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||| ||| ||||||||| || |||||    
T  44719950 actatgaaggaattcaagatatacaaatacaaaatttgggaaaatgtgattcataaccagatctaaaagcttgaaacaatttttcatattgataaaattg 44719851  T
Q  280 ataaattgatataaaataggattatagtaggcctactttgtg 321  Q
    ||||||||||||||| |||||| ||||||||| |||||||||    
T  44719850 ataaattgatataaattaggatcatagtaggcttactttgtg 44719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 19 - 348
Target Start/End: Complemental strand, 11060364 - 11060037
Alignment:
Q  19 aatcatatagcagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaat 118  Q
    |||||||  |||||||||||||||||   ||||||||| |  ||||||||| ||||| || ||||||||||||||||||||||||||||| || | |||     
T  11060364 aatcatactgcagaaatgcacatgcttaaataaatatattgggacaatatttgtaaataatcaattgaagtttagttgaatatgtattctgaa-gataac 11060266  T
Q  119 aatttttcttaaaaaatg-aaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttg 217  Q
    ||| |||||||||||||  ||| | ||||||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  11060265 aatctttcttaaaaaatttaaatagtataatttgaagttaaccttgagattaaaaagaagaaaccatgaaggaattcaagaaatacaaatacaaaatttg 11060166  T
Q  218 gaaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattatagtaggcctactt 317  Q
     |||||||||||||||||||| ||||||||| ||||||  |||||| ||||||||| |||||||||| ||||||||||||  || |||| || |||||||    
T  11060165 aaaaaatgtgattcataaccagatctgaaagtctgaaataattcttgatattgctaaaattgataaactgatataaaata-aatcatagcagacctactt 11060067  T
Q  318 tgtgcctgtaagggtttactatttgggacct 348  Q
    |||| ||||||| ||||| |||  |||||||    
T  11060066 tgtg-ctgtaagtgtttattatcagggacct 11060037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 374 - 712
Target Start/End: Original strand, 50106948 - 50107287
Alignment:
Q  374 ggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttaggg 473  Q
    |||||||||||||||||||||  |||||||  |||||||||||||| |||||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||    
T  50106948 ggacctaacaacaagtctcccttaaccacaaaacaacttcattgaggaagatgatccagttattgacgaagagtaacaattcgttgggacgagtttgggg 50107047  T
Q  474 atattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgac 573  Q
    |||||||||||||||| ||| |||||||||||   |||||||||||||||||| | |||| ||||||  ||  | |||||||||| ||||||||||||||    
T  50107048 atattgattttcggtttagggatattgatttttggggatattaattttcggttaaaggaccaaagtgaccatgtcctactttcacgttagtccatgtgac 50107147  T
Q  574 acctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagt 672  Q
    ||||||||||| ||||||||||||||| |||||||  ||||| |||||||| |||||| || | ||   |||||||| |||||||||| ||| ||||||     
T  50107148 acctcatactccttgtcagcataaaacctttgtcatgtcatcagttaacataattatttaacgccaaggactaaagtgataacggaagtgcacattcaga 50107247  T
Q  673 gactacattgtatttaatcctgattcaaggacctttgtga 712  Q
    |||||  |||||||||||||||| |||   ||||||||||    
T  50107248 gactattttgtatttaatcctgaatcagtaacctttgtga 50107287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 46 - 337
Target Start/End: Complemental strand, 1408369 - 1408075
Alignment:
Q  46 ggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaaaaatgaaacaatat 145  Q
    |||||||||||||| || ||| || ||||| || |||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||||||  | ||    
T  1408369 ggataaatatactaggataatgtttgtaaataatcaattgaattttagttgaatatgtattcataaagctaataatctttcataaaaaatgaaatgacat 1408270  T
Q  146 aatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaataca-aaatttggaaaaatgtgattcataacc-atatct 243  Q
    ||||||||||||||||| ||| ||||||||| | || ||| ||||||| |||||||| ||||||| || ||||| |||||||||||||||||| | | ||    
T  1408269 aatttgaagttaacattgagaataaaaagaaaagacaatgaaggaatttaagatataaaaatacagaattttgggaaaatgtgattcataaccaaaacct 1408170  T
Q  244 gaaagcctgaaacgattcttcatattgctagaattgataaattgatataaaataggattata-gtaggcctactttgtgcctgtaagggtttact 337  Q
    |||||| |||||  |||||||||||||||| |||||||||||||| |||||||||||| ||| | ||||||||| |||||||||||| |||||||    
T  1408169 gaaagcttgaaaaaattcttcatattgctataattgataaattgacataaaataggatcataggcaggcctactctgtgcctgtaagtgtttact 1408075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 342 - 716
Target Start/End: Complemental strand, 1408038 - 1407675
Alignment:
Q  342 gggacctaactgatagtaactatgctcagc-agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgac 440  Q
    |||||||||||| |||||| ||||| |||  ||||||  || ||||||||  || || |||||| ||||||||||| || || ||||| ||||| ||| |    
T  1408038 gggacctaactggtagtaaatatgcacagttagggactgaaaaacaagtcctcctcagccacataacaacttcattaaggaa-atgacccagttcttgtc 1407940  T
Q  441 gaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtg 540  Q
    |||||| |||||||| ||||||||||||| |  ||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |||| ||||||    
T  1407939 gaagagtaacacttcgttgggacgagtttggacatatttattttcggttcatggatattgattttcaaggatattaattttcggttcaaggaccaaagtg 1407840  T
Q  541 gtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcag 639  Q
     | | ||||||||||||||||||||||||||||||      ||||||||| |||||||||       |||||||| |||||| | |||||| || |||||    
T  1407839 ataattttctactttcactttagtccatgtgacac------ctctttgtcggcataaaac------aacatcatcagttaacaaaattatttaacgtcag 1407752  T
Q  640 aaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaac 716  Q
      |||||||| |||||  ||| ||||||||||  ||||| || |||||| || | | ||| ||||||||||||||||    
T  1407751 ggactaaagtgataacataagtgcatattcagaaactactttatatttagtcataagtcatggacctttgtgacaac 1407675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 342 - 753
Target Start/End: Complemental strand, 8975550 - 8975157
Alignment:
Q  342 gggacctaactgatagtaactatgctcagcag-ggacctaacaacaagtctcccacaaccacattacaacttcatt-gagaaagatgactcagtttttga 439  Q
    ||||||||||||||||||| ||| | |||  | |||||||||| ||| ||||     ||||||| ||||||||||| ||| |||||||  || || ||||    
T  8975550 gggacctaactgatagtaagtatacgcagtcgaggacctaacatcaaatctc-----accacataacaacttcatttgaggaagatgatccaattcttga 8975456  T
Q  440 cgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagt 539  Q
    ||||||| |||||||| ||||||  ||||| |||||||||||||||||||| || |||||||||||                 ||||  ||||| |||||    
T  8975455 cgaagagcaacacttcgttgggagaagtttggggatattgattttcggttcggggatattgattttt----------------ggtttcgggaccaaagt 8975372  T
Q  540 ggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata-ttattcaatgtca 638  Q
    |  || ||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| ||||||| ||||||  |||||| | ||||| || | ||    
T  8975371 gaccattttctactttcactttagtccctgtgacatctcatactccttgtcggcataaaacatttgtcatatcatcaattaacaaaattatttaacgcca 8975272  T
Q  639 gaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaa 738  Q
     | |||||||| |||||| ||| |||||||||  |||||| || ||||||||| ||| ||| |||||||||||||||| | ||| | ||||||| |||||    
T  8975271 aagactaaagtgataacgaaagtgcatattcatggactactttatatttaatcttgagtcagggacctttgtgacaacaaggtgcaaagttagggaccaa 8975172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 754
Target Start/End: Original strand, 11060496 - 11060910
Alignment:
Q  325 gtaagggtttactatttgggacctaactgatagtaactatgctcag-cagggacctaacaacaagtctcccacaaccacattacaacttcattgagaaag 423  Q
    ||||| ||||||| || ||||| ||||||||||||| ||||| ||  ||| || |||||| |||||||||| ||||||||| |||||||||||||| |||    
T  11060496 gtaagtgtttactgttagggacataactgatagtaagtatgcacaatcagtgatctaacagcaagtctcccgcaaccacataacaacttcattgaggaag 11060595  T
Q  424 atgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttcggttcaggaatattgattttcaaggatattaattttcg 523  Q
    || ||  |||| ||| ||||||| |||||||| ||| |||||||||   ||||||||||||||||||||                ||||||| ||||||     
T  11060596 attacctagttcttggcgaagagcaacacttcattgcgacgagtttgtagatattgattttcggttcag----------------ggatattgattttct 11060679  T
Q  524 gttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca 623  Q
    |||||||||  ||||||   | ||||||||||||||||||||  ||||| ||||||||| | ||||||| ||||||| |||  ||| ||||| |||||||    
T  11060680 gttcagggatcaaagtgacaattttctactttcactttagtcattgtga-acctcataccccttgtcagaataaaaccttttccacgtcatcagttaaca 11060778  T
Q  624 -tattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtg 722  Q
      |||||| || ||| |  |||||||| |||||| ||| ||  |||||| |||||  |||||||||||  ||| ||| |||||||||||||| ||| |||    
T  11060779 gaattatttaacgtcggggactaaagtgataacgaaagtgcccattcagggactattttgtatttaattttgagtcatggacctttgtgacagcgaggtg 11060878  T
Q  723 tatagttaggaaccaaagtgaccatttactca 754  Q
     ||||| | | | |||||||||||||||||||    
T  11060879 catagtcaaggatcaaagtgaccatttactca 11060910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 372 - 753
Target Start/End: Complemental strand, 44719730 - 44719348
Alignment:
Q  372 agggacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttag 471  Q
    |||||||||||||| ||||| |  |||||||   |||||||||| ||| ||||||| |  ||| ||||| ||||| |||||||  |||| |||||||| |    
T  44719730 agggacctaacaacgagtcttctgcaaccacggaacaacttcatcgaggaagatgatttggttcttgacaaagagcaacacttagttggtacgagtttgg 44719631  T
Q  472 ggatattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtg 571  Q
    ||||||| |||| ||||||||| ||||| ||||||| ||||||| |||||| |||||||||  ||||||   | |||||||||||| |||||| ||||||    
T  44719630 ggatattaatttccggttcagggatattaattttcagggatattgattttcagttcagggagcaaagtgacaattttctactttcattttagttcatgtg 44719531  T
Q  572 acacctcatactctttgtcagcataaaacttttgtcacatcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattca 670  Q
    |||| |  ||| | |||| |||||||||| |||| |||| ||||  | ||| | |||||| || | |||| |||||| | |||||||||| |||||||||    
T  44719530 acacattgtaccccttgttagcataaaacctttgccacaacatcaatgaacaaaattatttaaagacagagactaaaatgataacggaagtgcatattca 44719431  T
Q  671 gtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactc 753  Q
       ||||| || ||||||||||||| | |  || ||||||||||||||  || | ||| | | | ||||||||||||||||||    
T  44719430 taaactactttatatttaatcctgagttagagatctttgtgacaacgagatgcaaagtcaaggatcaaagtgaccatttactc 44719348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 36395795 - 36395702
Alignment:
Q  112 agctaataatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaa 205  Q
    |||||||||| ||||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  36395795 agctaataatctttcttaaaaaatgaatgagtataatttgaagttaacattgagattaaaaagaagaaaccatgaaggaattcaagatatacaa 36395702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 508 - 756
Target Start/End: Complemental strand, 22856922 - 22856675
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtc 607  Q
    |||||||| | ||| |||||||| ||||||||| ||| ||||||||||||||||||||  ||||||||||||||  |  ||||| | ||||| || ||||    
T  22856922 aggatattgaattttggttcaggaactaaagtgatcattttctactttcactttagtc--tgtgacacctcatatgccatgtcatcgtaaaatttgtgtc 22856825  T
Q  608 acatcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacct 706  Q
    |||| |||  ||||||| |||||| || ||| || |||||||| |||||||||| ||| | | || |||| | |||||||||||||||| ||||| | ||    
T  22856824 acataatcacttaacataattatttaacgtcggagactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatct 22856725  T
Q  707 ttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactcaat 756  Q
    |||| ||||||  ||| | ||| ||  || ||||||||||||| ||||||    
T  22856724 ttgtaacaacgtggtgcagagtcagtgactaaagtgaccatttgctcaat 22856675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 509 - 704
Target Start/End: Complemental strand, 25038124 - 25037925
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||| ||||||||||| |||||| | | ||||||||||||||||||| ||||||||||||||||   | ||||| |||||||| | |||||    
T  25038124 ggatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcatatgttatgtcatcataaaacatgtgtca 25038025  T
Q  609 ----catcatcggttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggac 704  Q
        |||||||  |||||||| |  |||||||| ||||||||||| |||||| |||  || | ||||||||| | |||||||||||| ||| ||| ||||    
T  25038024 catgcatcatcacttaacataattatcaatgtcggaaactaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcagggac 25037925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 509 - 704
Target Start/End: Complemental strand, 25043336 - 25043137
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||| ||||||||||| |||||| | | ||||||||||||||||||| ||||||||||||||||   | ||||| |||||||| | |||||    
T  25043336 ggatattgatttttggttcagggaccaaagtgataattttctactttcactttagttcatgtgacacctcatatgttatgtcatcataaaacatgtgtca 25043237  T
Q  609 ----catcatcggttaacatattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggac 704  Q
        |||||||  |||||||| |  |||||||| ||||||||||| |||||| |||  || | ||||||||| | |||||||||||| ||| ||| ||||    
T  25043236 catgcatcatcacttaacataattatcaatgtcggaaactaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcagggac 25043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 375 - 609
Target Start/End: Complemental strand, 11059977 - 11059759
Alignment:
Q  375 gacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttaggga 474  Q
    ||||||||| |||||||||| ||||||||  |||||||||  ||| |||||||| || || || || ||||| |||||||| ||| ||| |||||| |||    
T  11059977 gacctaacatcaagtctccctcaaccacagaacaacttcaacgaggaagatgacacaattcttaacaaagagcaacacttcgttgagacaagtttaagga 11059878  T
Q  475 tattgattttcggttcaggaatattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgaca 574  Q
    ||||||||| ||||| |||                ||||||||||||||||| |||||  ||||||   | ||| ||| | ||||||||||| |||||||    
T  11059877 tattgatttgcggtttagg----------------gatattaattttcggttgagggatcaaagtgacaattttttacctccactttagtccctgtgaca 11059794  T
Q  575 cctcatactctttgtcagcataaaacttttgtcac 609  Q
    |||||||||| |||||| |||||||||||||||||    
T  11059793 cctcatactccttgtcaccataaaacttttgtcac 11059759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 568 - 656
Target Start/End: Complemental strand, 33342600 - 33342511
Alignment:
Q  568 tgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaactaaagtaataacg 656  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||| || |||||| |||||||| ||||||    
T  33342600 tgtgacacctcatactccttgtcagcataaaacttttgtcacatcatcacttaacataattatttaacgtcagagactaaagtgataacg 33342511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 510 - 680
Target Start/End: Original strand, 44720728 - 44720901
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctc--atactctttgtcagcataaaacttttgtc 607  Q
    |||||| |||||||||||| | || ||||||   | ||||||||||||||||||||  |||||||||||  |||| |||||||||||||| |||||||||    
T  44720728 gatattgattttcggttcaagaaccaaagtgacaattttctactttcactttagtcagtgtgacacctcatataccctttgtcagcataagacttttgtc 44720827  T
Q  608 acatcatcggttaa-catattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacat 680  Q
    || |||||  ||||  | |||||| || |||||| |||||||| |||| ||||| ||| |||||| || |||||    
T  44720828 acgtcatcttttaataaaattatttaacgtcagagactaaagtgataatggaagtgcacattcagggattacat 44720901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 509 - 749
Target Start/End: Complemental strand, 3117892 - 3117651
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||||||||| |||||| |||||||| || ||| ||||||||||||||||||||  ||||||||||||||     || || | |||||| | |||||    
T  3117892 ggatattaatttttggttcaaggactaaaatgatcattttctactttcactttagtcattgtgacacctcatatgtcatgccatcgtaaaacatgtgtca 3117793  T
Q  609 catcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    |||||||  ||||| | |||||| ||  |||||  ||||||| |||||||||| | | | |||| || | | |||||||||||| ||| |||  ||||||    
T  3117792 catcatcaattaacaaaattatttaacttcagacgctaaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtcagagacctt 3117693  T
Q  708 tgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
    ||||| ||||| ||| | ||||||| || ||| |||| ||||    
T  3117692 tgtgataacgatgtgaagagttagggactaaaatgactattt 3117651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 495 - 615
Target Start/End: Complemental strand, 29766180 - 29766060
Alignment:
Q  495 atattgattttcaaggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagca 594  Q
    ||||||||||||  ||||||| |||||  |||||||||| ||||||   | |||||| ||||||||||||   | |||||||||||||| ||||||||||    
T  29766180 atattgattttcggggatattgattttttgttcagggaccaaagtgacaattttctattttcactttagtaactatgacacctcatactatttgtcagca 29766081  T
Q  595 taaaacttttgtcacatcatc 615  Q
    |||||| ||||| ||||||||    
T  29766080 taaaacatttgttacatcatc 29766060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 546 - 660
Target Start/End: Original strand, 22857496 - 22857611
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacat-attattcaatgtcagaaact 644  Q
    ||||||||||||||||||||||||||||||||||||     |||||  ||||||||| ||||||||||||  ||||||| |||||| || ||||   |||    
T  22857496 tttctactttcactttagtccatgtgacacctcatatgtcatgtcattataaaacttgtgtcacatcatcacttaacataattatttaacgtcatggact 22857595  T
Q  645 aaagtaataacggaag 660  Q
    ||||| ||||||||||    
T  22857596 aaagtgataacggaag 22857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 595
Target Start/End: Complemental strand, 6612653 - 6612567
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcat 595  Q
    ||||||| ||||| |||||| |||| |||||| ||| |||||||||| | |||||||| |||||||||||||| || ||||||||||    
T  6612653 ggatattgatttttggttcaaggacaaaagtgatcattttctactttgaatttagtccctgtgacacctcatattccttgtcagcat 6612567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 518 - 691
Target Start/End: Complemental strand, 39725573 - 39725399
Alignment:
Q  518 ttttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcgg 617  Q
    |||| |||| ||||||| ||||| ||| |||||||||||| |||||||| |  ||||||| || | | ||||||||| ||||| |||| ||||||||| |    
T  39725573 tttttggttaagggactgaagtgatcattttctactttcattttagtcccttcgacaccttattcaccttgtcagcacaaaacatttgccacatcatcag 39725474  T
Q  618 ttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatc 691  Q
    | ||| | | | || || |||| | |||||| |||||||||||| ||||||||| | ||||  ||||||||||||    
T  39725473 tcaacaaaagtttttaacgtcaaagactaaactaataacggaagtgcatattcaataactattttgtatttaatc 39725399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 51450243 - 51450171
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| |||||| |||||| |||| ||| |||||||||||| |||||||| ||||||||||||||    
T  51450243 ggatatttatttttggttcatggactatagtgatcattttctactttcagtttagtccctgtgacacctcata 51450171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 7944378 - 7944306
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||| ||||||| |||||| | | |||||||||||||||| ||| |||||||||||||||    
T  7944378 ggatattgatttttggtccagggaccaaagtgataattttctactttcactttggtctatgtgacacctcata 7944306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 509 - 580
Target Start/End: Complemental strand, 16249886 - 16249815
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||||| ||||||||||||||||||||| ||  || |||||||||||||||||| || | ||||| |||||    
T  16249886 ggatattgattttcggttcagggactaaaatgaccattttctactttcactttagcccctatgacagctcat 16249815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 546 - 756
Target Start/End: Original strand, 39726603 - 39726814
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacatat-tattcaatgtcagaaact 644  Q
    |||||||||||||||||||| || ||| ||||| ||| | ||||||||  |||||  ||||||| |||||  |||||| |  | ||||| |||| | |||    
T  39726603 tttctactttcactttagtctatatgatacctcgtacaccttgtcagctcaaaacacttgtcacctcatcaattaacaaaaattttcaacgtcaaagact 39726702  T
Q  645 aaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgac 744  Q
    ||| | ||||  |||  |||  ||||| |||||| || ||||||||||| | |||| ||||| ||| ||||||| ||||| ||||| | || ||| ||||    
T  39726703 aaactgataaacgaaatgcactttcagagactactttatatttaatcctaagtcaaagacctatgtaacaacgaggtgtacagttaaggactaaaatgac 39726802  T
Q  745 catttactcaat 756  Q
    || |||||||||    
T  39726803 cacttactcaat 39726814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 642 - 760
Target Start/End: Original strand, 7945568 - 7945686
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| ||||| |||| ||||   |||||||||||||||| ||| | |||| ||||||| ||| ||| | ||| ||| |||||| |    
T  7945568 actaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatgtgacagcgaggtgcagagtcagggaccaaaat 7945667  T
Q  742 gaccatttactcaattttt 760  Q
    ||  |||| ||||||||||    
T  7945668 gattatttgctcaattttt 7945686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 9340939 - 9340997
Alignment:
Q  523 ggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  9340939 ggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 9340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 524 - 581
Target Start/End: Original strand, 32665685 - 32665742
Alignment:
Q  524 gttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  32665685 gttcagggaccaaagtgaccattttctactttcactttggtccttgtgacacctcata 32665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 718
Target Start/End: Complemental strand, 1001263 - 1001187
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacga 718  Q
    |||||| | ||||| |||| ||| |||||| |||||| ||||||||||||| || ||| ||||||||||| ||||||    
T  1001263 actaaactgataacagaagtgcacattcagagactactttgtatttaatcccgagtcatggacctttgtggcaacga 1001187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 577
Target Start/End: Complemental strand, 1001394 - 1001326
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacct 577  Q
    ||||||| |||||||||||| |||  |||||    | ||||||||||||||||||||||||||||||||    
T  1001394 ggatattgattttcggttcaaggatcaaagtaactattttctactttcactttagtccatgtgacacct 1001326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 9339869 - 9339797
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| ||||||| ||| ||||||  || |||||||||||||||| |||| ||||||| ||||||    
T  9339869 ggatattgatttttggttcagagaccaaagtgaccattttctactttcactttggtccctgtgacatctcata 9339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 591
Target Start/End: Original strand, 534427 - 534510
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtca 591  Q
    |||||||| ||||||| |||  |||  |||||| ||| ||| |||||||||||||||||  ||||||| |||||||| ||||||    
T  534427 aggatattgattttcgattcgtggatcaaagtgatcattttttactttcactttagtccccgtgacacgtcatactccttgtca 534510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 509 - 595
Target Start/End: Original strand, 6613867 - 6613953
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcat 595  Q
    ||||||| ||||| ||||||||||  |||||  | | || |||||||||||||||||| ||||| ||| ||||||  ||||||||||    
T  6613867 ggatattgatttttggttcagggaacaaagtaataatttcctactttcactttagtccctgtgaaaccccatactgcttgtcagcat 6613953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 7945456 - 7945526
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||| |||||| ||||||  || ||||||||||||||||  ||| ||||||||||||||    
T  7945456 atattgatttttggtttagggaccaaagtgaccattttctactttcactttgatccttgtgacacctcata 7945526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 683 - 749
Target Start/End: Complemental strand, 10333054 - 10332988
Alignment:
Q  683 tatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
    ||||||||||||| |||||||||| ||||||||||| ||| | ||| ||| || |||||||| ||||    
T  10333054 tatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaagtgactattt 10332988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 546 - 580
Target Start/End: Complemental strand, 11830095 - 11830061
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcat 580  Q
    ||||||||||||||||| |||||||||||||||||    
T  11830095 tttctactttcactttaatccatgtgacacctcat 11830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 714
Target Start/End: Complemental strand, 5782540 - 5782451
Alignment:
Q  625 attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgaca 714  Q
    |||||| || |||||| |||||||| |||| ||||| ||||| |||| |||| | |||||||||||| ||| |||  ||||| |||||||    
T  5782540 attatttaacgtcagagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtgaca 5782451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 832
Target Start/End: Complemental strand, 26042628 - 26042563
Alignment:
Q  767 aaataaaaagatacacacttattaactttgaccttaatatttttaggttggtccaagttaacaacc 832  Q
    |||||||||| | |||| ||| |||||| || |||||| |||||| ||||||| ||||||||||||    
T  26042628 aaataaaaaggtgcacatttactaacttagaacttaatgtttttaagttggtctaagttaacaacc 26042563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 5e-74; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 33986795 - 33987044
Alignment:
Q  19 aatcatatagcagaaatgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaat 118  Q
    |||||| | |||||||||||||||| | ||||||||||||  ||||||||| ||||| || |||||||||||||||||||||||||||||| ||||||||    
T  33986795 aatcatgttgcagaaatgcacatgcccagataaatatactgggacaatatttgtaaataatcaattgaagtttagttgaatatgtattcttgaagctaat 33986894  T
Q  119 aatttttcttaaaaaatgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaattcaagatatacaaatacaaaatttgg 218  Q
    ||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||   || |||||||||||||||||||||||||| ||    
T  33986895 aatctttcttaaaaaatgaaatagtataatttgaagttaacattgagattaaaaagaagaaaccacaaagcaattcaagatatacaaatacaaaattcgg 33986994  T
Q  219 aaaaatgtgattcataaccatatctgaaagcctgaaacgattcttcatat 268  Q
     ||||| |||||||| || | | |||||||||| |||| |||||||||||    
T  33986995 gaaaatatgattcatgactaaacctgaaagccttaaacaattcttcatat 33987044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 11074555 - 11074701
Alignment:
Q  35 tgcacatgctcggataaatatactaagacaatattggtaaacaagcaattgaagtttagttgaatatgtattcttaaagctaataatttttcttaaaaaa 134  Q
    ||||||||| | ||||||||||||| ||||||||| ||||| || |||||||||||||| ||||||||||||||| ||      ||| ||||||||||||    
T  11074555 tgcacatgcgcagataaatatactaggacaatatttgtaaataatcaattgaagtttagctgaatatgtattcttgaa------aatctttcttaaaaaa 11074648  T
Q  135 tgaaacaatataatttgaagttaacattaagattaaaaagaagaaaccatggaggaat 192  Q
    |     | |||||||| ||||||| ||||||||||||||||||||| |||| ||||||    
T  11074649 t-----agtataatttaaagttaatattaagattaaaaagaagaaagcatgaaggaat 11074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 527 - 718
Target Start/End: Complemental strand, 24621302 - 24621110
Alignment:
Q  527 cagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaaca-ta 625  Q
    ||||||| |||||| ||| |||||||||||| |||||||| ||| ||||||||| |  |||||||||| ||||| ||||  || ||||| ||||| |  |    
T  24621302 cagggaccaaagtgatcattttctactttcattttagtccttgtaacacctcatgcattttgtcagcacaaaacatttgagacctcatcagttaatagaa 24621203  T
Q  626 ttattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacga 718  Q
     | || |||||||   |||||| | |||||||||||||  ||| || || | | |||||||||||| ||| |||||||||||| ||| |||||    
T  24621202 gtttttaatgtcaatgactaaactgataacggaagcgcgcatttagagatttctttgtatttaatcatgagtcaaggacctttatgataacga 24621110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 508 - 593
Target Start/End: Complemental strand, 30748234 - 30748149
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagc 593  Q
    |||||||| ||||| | ||||||||| ||| ||  || ||| ||||||||||||||||| |||||||| |||||||| ||||||||    
T  30748234 aggatattgatttttgattcagggaccaaattgaccattttttactttcactttagtccctgtgacacgtcatactccttgtcagc 30748149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 379 - 470
Target Start/End: Complemental strand, 11676302 - 11676211
Alignment:
Q  379 taacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagttta 470  Q
    ||||| ||||||| || ||||||||  |||| |||||||| |||||||| |||||| ||||||||||| ||| |||| |||| | |||||||    
T  11676302 taacagcaagtcttccgcaaccacacaacaatttcattgaaaaagatgattcagttcttgacgaagagcaacgcttcgttggaatgagttta 11676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 757 - 828
Target Start/End: Complemental strand, 12323977 - 12323906
Alignment:
Q  757 ttttatgtctaaataaaaagatacacacttattaactttgaccttaatatttttaggttggtccaagttaac 828  Q
    |||| |||| ||||||||| || ||||||| |||||||  | ||||||||||||||||||||| ||||||||    
T  12323977 ttttttgtccaaataaaaaaatgcacacttgttaacttaaatcttaatatttttaggttggtctaagttaac 12323906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 615
Target Start/End: Original strand, 19600125 - 19600230
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||||||||||| || ||| || ||||||  || ||||||||||||||||||||| |||||||  |||| | | |||||| || ||||| |||||||    
T  19600125 ggatattaattttcgatttagg-accaaagtgaccattttctactttcactttagtccctgtgacatttcatgcaccttgtcaccacaaaacatttgtca 19600223  T
Q  609 catcatc 615  Q
    | |||||    
T  19600224 cctcatc 19600230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 550 - 615
Target Start/End: Complemental strand, 5265400 - 5265335
Alignment:
Q  550 tactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatc 615  Q
    ||||||||||||| ||||||||||||||||| | | |||| |||| ||||| |||||||| |||||    
T  5265400 tactttcactttactccatgtgacacctcatgcaccttgttagcacaaaacatttgtcacctcatc 5265335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 753
Target Start/End: Original strand, 3778818 - 3778919
Alignment:
Q  652 taacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttac 751  Q
    |||| |||| ||| || ||| |||||| |||||||||| |||||||||  | | ||||||| | ||||||| | ||| ||| | ||||||||||||||||    
T  3778818 taacagaagtgcacatccagggactactttgtatttaagcctgattcagtggcatttgtgatagcgaagtgcaaagtcagggatcaaagtgaccatttac 3778917  T
Q  752 tc 753  Q
    ||    
T  3778918 tc 3778919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 511 - 580
Target Start/End: Original strand, 12676373 - 12676442
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    |||||||||||||||| |||||||||||||   | |||||| ||| |||||| ||| | |||||||||||    
T  12676373 atattaattttcggtttagggactaaagtgacaattttctaatttaactttaatccctatgacacctcat 12676442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 644 - 757
Target Start/End: Complemental strand, 31219062 - 31218949
Alignment:
Q  644 taaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtga 743  Q
    |||||| |||||||||| ||| | ||||  ||| | |||||||||||||||| | |||||||| ||||||| ||| ||| | ||| ||  |  |||||||    
T  31219062 taaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtcagagattaaagtga 31218963  T
Q  744 ccatttactcaatt 757  Q
    |||||| |||||||    
T  31218962 ccatttgctcaatt 31218949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 530 - 571
Target Start/End: Original strand, 31219101 - 31219142
Alignment:
Q  530 ggactaaagtggtcaatttctactttcactttagtccatgtg 571  Q
    |||||||||||  || ||||||||||||||||||||||||||    
T  31219101 ggactaaagtgaccattttctactttcactttagtccatgtg 31219142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 2e-24; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 509 - 710
Target Start/End: Original strand, 36827355 - 36827557
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||||| ||||||||| ||| |  ||| |||||| |||||||||||||| ||||| || |||  ||| || |||||||||||| |||||||    
T  36827355 ggatattgattttcgattcagggaccaaaataatcattttctattttcactttagtccctgtgatacttcacgctccttctcagcataaaacatttgtca 36827454  T
Q  609 catcatcggttaac-atattattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    |||||||  ||||| | |||||| ||  ||||| |||||||| |||||||||| | | |||||| || ||  || ||||||||||||| ||||||| |||    
T  36827455 catcatcacttaacaaaattatttaacatcagagactaaagtgataacggaagtgtacattcagagattattttatatttaatcctgagtcaaggatctt 36827554  T
Q  708 tgt 710  Q
    |||    
T  36827555 tgt 36827557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 386 - 493
Target Start/End: Original strand, 29188185 - 29188292
Alignment:
Q  386 aagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaagagaaacacttccttgggacgagtttagggatattgattttc 485  Q
    |||||| || ||||||||  ||| |||||| ||| |||||||| ||||| ||||||||||  |||| ||| |||||||||||||| | ||||||||||||    
T  29188185 aagtcttccgcaaccacaaaacagcttcatggaggaagatgacccagttcttgacgaagaacaacatttcattgggacgagtttaagaatattgattttc 29188284  T
Q  486 ggttcagg 493  Q
    ||||||||    
T  29188285 ggttcagg 29188292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 511 - 575
Target Start/End: Original strand, 47428485 - 47428549
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||||||| ||||||||||||||||||  || || |||||||||||||||||||||||||||    
T  47428485 atattaatttttggttcagggactaaagtgaccatttcctactttcactttagtccatgtgacac 47428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 625 - 755
Target Start/End: Complemental strand, 19114659 - 19114529
Alignment:
Q  625 attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgta 724  Q
    |||||| || || ||| |||||||| |||||||||| ||| | | ||||||| | |||||||||||| ||| ||| |||||| ||||||||||||||| |    
T  19114659 attatttaacgtaagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaacgaagtgca 19114560  T
Q  725 tagttaggaaccaaagtgaccatttactcaa 755  Q
     ||| ||| || ||||||| ||||| |||||    
T  19114559 gagtcagggactaaagtgatcatttgctcaa 19114529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 19115067 - 19115133
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| |||||  ||||| ||||||||||||| | ||||||||||||||||||||||||||||||    
T  19115067 ggatattgatttttagttcatggactaaagtggttattttctactttcactttagtccatgtgacac 19115133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 33427954 - 33427888
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| ||||||||| |||||||| | | ||||||||||||||||||||||||||||||    
T  33427954 ggatattgatttttggttcaggggctaaagtgataattttctactttcactttagtccatgtgacac 33427888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 55389371 - 55389441
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||||||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  55389371 atattgattttcggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 55389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 509 - 739
Target Start/End: Complemental strand, 612457 - 612226
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtca 608  Q
    ||||||| ||||| |||||| ||  |||| || ||| ||||||||||||||||||||  |||||||||||||      ||||| | ||||||   |||||    
T  612457 ggatattgatttttggttcatgggttaaattgatcattttctactttcactttagtctctgtgacacctcatgtgtcatgtcatcgtaaaacacgtgtca 612358  T
Q  609 catcatcggttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctt 707  Q
    |||||||  ||||||| |||||| ||||| || ||||||||| |||||  |||  || |||||  |||| | |||||||||||  ||| || |||| |||    
T  612357 catcatcacttaacataattatttaatgtgaggaactaaagtgataacataagtacacattcacggacttctttgtatttaattttgaatcgaggatctt 612258  T
Q  708 tgtgacaacgaagtgtatagttaggaaccaaa 739  Q
    ||| ||||||| ||| ||||| ||| ||||||    
T  612257 tgtaacaacgaggtgcatagtcagggaccaaa 612226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 510 - 581
Target Start/End: Complemental strand, 2591847 - 2591776
Alignment:
Q  510 gatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||| ||||| | ||||||||| |||||||  | ||| ||||||||||||||||||||||||||||||||    
T  2591847 gatattgatttttgcttcagggaccaaagtggcaattttttactttcactttagtccatgtgacacctcata 2591776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 546 - 625
Target Start/End: Complemental strand, 3671244 - 3671165
Alignment:
Q  546 tttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcggttaacata 625  Q
    |||||||||||||||||||||  ||||||  |||||| | ||||||||||||||| | ||||||||||||  ||||||||    
T  3671244 tttctactttcactttagtccccgtgacatgtcataccccttgtcagcataaaacatgtgtcacatcatcacttaacata 3671165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 517 - 714
Target Start/End: Complemental strand, 40206117 - 40205918
Alignment:
Q  517 attttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtcacatcatcg 616  Q
    |||||||||||| |||| ||||||  || ||| |||||||||||||| || ||||||| ||||  | | ||||||||| ||||| |||| ||| ||||      
T  40206117 attttcggttcaaggaccaaagtgaccattttatactttcactttagcccttgtgacaactcacgcaccttgtcagcacaaaacatttgccacctcatta 40206018  T
Q  617 gttaacat-attattcaatgtcagaaactaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaag-gacctttgtgaca 714  Q
    |||||||| ||| || || | ||   |||||| | |||||||||| ||| |||||| |||||| |||| ||||||| ||| ||||| ||||||| |||||    
T  40206017 gttaacataattttttaacgccaatgactaaactgataacggaagtgcacattcagagactactttgtttttaatcgtgagtcaagagacctttatgaca 40205918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 45259658 - 45259566
Alignment:
Q  377 cctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacgaa-gagaaacacttccttgggacgagttt 469  Q
    ||||||| ||| ||| |||||||||||| |||| |||||||||||| || ||  |||| |||||||| |||||||||||| |||||||||||||    
T  45259658 cctaacatcaattctaccacaaccacataacaatttcattgagaaaaat-acaaagttcttgacgaatgagaaacacttcattgggacgagttt 45259566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 36279175 - 36279103
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||||  |||| ||||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  36279175 ggatatttttttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 36279103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 48574359 - 48574431
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| | ||| |||||| |||||||||||  || |||||||||||||||| |||| ||||||||||||||    
T  48574359 ggatattgaattttggttcaaggactaaagtgaccattttctactttcactttggtccctgtgacacctcata 48574431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 581
Target Start/End: Complemental strand, 53957896 - 53957824
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||||| ||||| |||||| ||||||||||  ||| |||||||||||||||| ||||  |||||||||||||    
T  53957896 ggatattgatttttggttcatggactaaagtaatcattttctactttcactttggtccccgtgacacctcata 53957824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 509 - 580
Target Start/End: Complemental strand, 55388282 - 55388211
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    ||||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||| |||||||| ||||    
T  55388282 ggatattgatttttggttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacatcat 55388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 19114736 - 19114670
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| | |||||||| |||||||  || ||||||||||||||||||||| ||||||||    
T  19114736 ggatattgatttttgattcagggattaaagtgaccattttctactttcactttagtccttgtgacac 19114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 509 - 575
Target Start/End: Original strand, 47117972 - 47118037
Alignment:
Q  509 ggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacac 575  Q
    ||||||| ||||| ||||||||||||||||| | | ||||||| |||||||||||||| ||||||||    
T  47117972 ggatattgatttttggttcagggactaaagt-gaccatttctattttcactttagtccttgtgacac 47118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 48808593 - 48808523
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| ||||||||||| ||||||  || |||||||||||||||| |||  ||||||||||||||    
T  48808593 atattgatttttggttcagggaccaaagtgaccattttctactttcactttggtctctgtgacacctcata 48808523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 524 - 581
Target Start/End: Complemental strand, 17700727 - 17700670
Alignment:
Q  524 gttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    |||||||||| ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  17700727 gttcagggaccaaagtgaccattttctactttcactttggtccctgtgacacctcata 17700670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 754 - 818
Target Start/End: Original strand, 31612247 - 31612311
Alignment:
Q  754 aatttttatgtctaaataaaaagatacacacttattaactttgaccttaatatttttaggttggt 818  Q
    ||||||| |||| |||||||||| |||||| ||  |||||| ||||||||| |||||||||||||    
T  31612247 aatttttttgtccaaataaaaaggtacacatttgctaacttagaccttaatgtttttaggttggt 31612311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 758
Target Start/End: Complemental strand, 36279061 - 36278945
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||| | |||||||||| ||| | |||| ||||   |||||||||||||||| ||| |||||| |||||||||||  |||||| | ||| || |||||    
T  36279061 actaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggacctatgtgacaacgagctgtataatcagggactaaagt 36278962  T
Q  742 gaccatttactcaattt 758  Q
    ||| |||| ||| ||||    
T  36278961 gactatttgctccattt 36278945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 615
Target Start/End: Original strand, 3694019 - 3694126
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcatactctttgtcagcataaaacttttgtc 607  Q
    |||| |||||||||   ||||||||  ||||||  || ||| ||||||||||||||||   || |||| |||||||| ||||||||||||||| | || |    
T  3694019 aggagattaattttttattcagggatcaaagtgaccattttgtactttcactttagtctccgttacacatcatactccttgtcagcataaaacatgtgac 3694118  T
Q  608 acatcatc 615  Q
    ||||||||    
T  3694119 acatcatc 3694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 749
Target Start/End: Original strand, 19115161 - 19115267
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||||| |||||||| ||| | ||| ||||| | |||||||||||||||| | |||||||| ||||||| ||| ||| | ||| | |||| |||||    
T  19115161 actaaagtaaaaacggaagtgcagagtca-tgacttctttgtatttaatcctgagtgaaggacctatgtgacatcgaggtgcagagtcacgaactaaagt 19115259  T
Q  742 gaccattt 749  Q
    ||| ||||    
T  19115260 gactattt 19115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 718
Target Start/End: Complemental strand, 39497307 - 39497240
Alignment:
Q  651 ataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacga 718  Q
    |||||| ||| ||| ||||| | ||||  |||||||||||||||| ||| ||||||||||||||||||    
T  39497307 ataacgaaagtgcacattcaataactattttgtatttaatcctgagtcatggacctttgtgacaacga 39497240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 570
Target Start/End: Complemental strand, 45599105 - 45599046
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgt 570  Q
    ||||| ||||| |||||||| |||||||||  || |||||||||||| ||||||||||||    
T  45599105 atattgatttttggttcaggaactaaagtgaccattttctactttcattttagtccatgt 45599046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 749
Target Start/End: Complemental strand, 48573094 - 48572987
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| ||| | |||| | ||   |||||||||||||||| ||| |||||| ||||| ||||| ||| | ||| ||| ||||||||    
T  48573094 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtcagggaccaaagt 48572995  T
Q  742 gaccattt 749  Q
    ||| ||||    
T  48572994 gactattt 48572987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 749
Target Start/End: Original strand, 55389483 - 55389590
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagt 741  Q
    |||||||| |||||||||| | | | |||| ||||  ||||||||||||  ||| |||| ||||| ||||||| ||| ||| | ||||||| ||||||||    
T  55389483 actaaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagttagggaccaaagt 55389582  T
Q  742 gaccattt 749  Q
    ||| ||||    
T  55389583 gactattt 55389590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 780 - 838
Target Start/End: Complemental strand, 31612089 - 31612031
Alignment:
Q  780 cacacttattaactttgaccttaatatttttaggttggtccaagttaacaaccgtatat 838  Q
    ||||||| ||||||| |||||||||||||| ||||||||| ||| || ||||| |||||    
T  31612089 cacacttgttaacttagaccttaatattttcaggttggtctaagctagcaaccatatat 31612031  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 680 - 754
Target Start/End: Original strand, 33428487 - 33428561
Alignment:
Q  680 ttgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccatttactca 754  Q
    ||||||||||| |||| ||| |||||| ||||||||||| ||| | ||| ||| || ||||||||||||| ||||    
T  33428487 ttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaagtgaccatttgctca 33428561  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 36280219 - 36280289
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||| |||||||||||||  || ||||| |||||| ||| |||| ||||||||||||||    
T  36280219 atattgatttttggtttagggactaaagtgaccattttcttctttcattttggtccgtgtgacacctcata 36280289  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Complemental strand, 48573206 - 48573136
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||  ||||||  || |||||||||||||||| |||| ||||||||||||||    
T  48573206 atattgatttttggttcatggatcaaagtgaccattttctactttcactttggtccctgtgacacctcata 48573136  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 581
Target Start/End: Original strand, 48809557 - 48809627
Alignment:
Q  511 atattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcata 581  Q
    ||||| ||||| |||||| |||  ||||||  || ||||||||||||||||||||| | ||||||||||||    
T  48809557 atattgatttttggttcatggatcaaagtgaccattttctactttcactttagtccttctgacacctcata 48809627  T

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Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 680 - 749
Target Start/End: Complemental strand, 34263876 - 34263807
Alignment:
Q  680 ttgtatttaatcctgattcaaggacctttgtgacaacgaagtgtatagttaggaaccaaagtgaccattt 749  Q
    |||||||||||||||| |||||||||| ||||||| ||| ||| | ||| |||  |||||||||| ||||    
T  34263876 ttgtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtcaggggccaaagtgactattt 34263807  T

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Target: scaffold0009 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 344 - 487
Target Start/End: Complemental strand, 142628 - 142485
Alignment:
Q  344 gacctaactgatagtaactatgctcagcagg-gacctaacaacaagtctcccacaaccacattacaacttcattgagaaagatgactcagtttttgacga 442  Q
    ||||||||||||||||| |||||  ||  || ||||||||| |||||||||  | ||||||| ||||||||||||||||||| ||| || || |||||||    
T  142628 gacctaactgatagtaagtatgcatagttggtgacctaacatcaagtctcctgcgaccacataacaacttcattgagaaagacgacacaattcttgacga 142529  T
Q  443 agagaaacacttccttgggacgagtttagggatattgattttcgg 487  Q
    |||| |||| ||  || |||||||||| | |||||||||||||||    
T  142528 agagcaaca-tttgtttggacgagtttggagatattgattttcgg 142485  T

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Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 580
Target Start/End: Complemental strand, 5841 - 5769
Alignment:
Q  508 aggatattaattttcggttcagggactaaagtggtcaatttctactttcactttagtccatgtgacacctcat 580  Q
    |||||||| ||||| ||||||||||  ||||||  || ||| |||||||||||||||| ||||||||||||||    
T  5841 aggatattgatttttggttcagggatcaaagtgaccactttttactttcactttagtctatgtgacacctcat 5769  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 642 - 714
Target Start/End: Complemental strand, 116164 - 116092
Alignment:
Q  642 actaaagtaataacggaagcgcatattcagtgactacattgtatttaatcctgattcaaggacctttgtgaca 714  Q
    |||||||| |||||||||| ||||| |||| ||||   |||||||||||||||| ||| |||||| |||||||    
T  116164 actaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgaca 116092  T

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