View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11502_low_5 (Length: 317)

Name: NF11502_low_5
Description: NF11502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11502_low_5
NF11502_low_5
[»] chr5 (10 HSPs)
chr5 (40-300)||(41250893-41251154)
chr5 (1-91)||(18593572-18593663)
chr5 (1-91)||(7452918-7453009)
chr5 (26-91)||(29087808-29087873)
chr5 (26-91)||(5656779-5656844)
chr5 (26-91)||(7161700-7161765)
chr5 (26-91)||(34378429-34378494)
chr5 (28-91)||(698697-698760)
chr5 (26-79)||(18313340-18313393)
chr5 (37-82)||(18255147-18255192)
[»] chr3 (20 HSPs)
chr3 (1-91)||(2392163-2392254)
chr3 (1-91)||(2393926-2394017)
chr3 (1-91)||(45164183-45164274)
chr3 (1-91)||(31483210-31483301)
chr3 (1-90)||(34475418-34475508)
chr3 (26-87)||(23328034-23328095)
chr3 (26-91)||(30352125-30352190)
chr3 (26-91)||(43012707-43012772)
chr3 (27-90)||(21343678-21343741)
chr3 (1-87)||(40023229-40023316)
chr3 (26-85)||(50305260-50305319)
chr3 (29-87)||(45399119-45399177)
chr3 (30-91)||(17551287-17551348)
chr3 (26-91)||(47236028-47236093)
chr3 (27-91)||(9583740-9583804)
chr3 (26-91)||(19176836-19176901)
chr3 (1-84)||(25506730-25506814)
chr3 (1-87)||(50559978-50560065)
chr3 (28-91)||(53248230-53248293)
chr3 (37-86)||(4463782-4463831)
[»] chr7 (21 HSPs)
chr7 (1-91)||(31971795-31971886)
chr7 (1-91)||(47325545-47325636)
chr7 (26-91)||(38306590-38306655)
chr7 (1-91)||(5859943-5860034)
chr7 (26-91)||(10244510-10244575)
chr7 (28-91)||(25161138-25161201)
chr7 (1-91)||(42454394-42454485)
chr7 (1-91)||(44353224-44353315)
chr7 (27-91)||(41089431-41089494)
chr7 (1-87)||(6585220-6585307)
chr7 (26-91)||(37795326-37795391)
chr7 (26-91)||(37795654-37795719)
chr7 (1-91)||(3419059-3419148)
chr7 (1-91)||(33434491-33434582)
chr7 (1-91)||(43482235-43482325)
chr7 (28-83)||(3867453-3867508)
chr7 (1-87)||(34391516-34391603)
chr7 (26-91)||(3419344-3419407)
chr7 (1-63)||(35745492-35745555)
chr7 (37-91)||(40726202-40726256)
chr7 (41-90)||(48161741-48161790)
[»] chr1 (15 HSPs)
chr1 (1-91)||(30685584-30685675)
chr1 (1-91)||(31584700-31584790)
chr1 (1-91)||(7002517-7002608)
chr1 (1-87)||(46814125-46814212)
chr1 (1-91)||(40216166-40216257)
chr1 (26-91)||(5459490-5459555)
chr1 (26-91)||(6804868-6804932)
chr1 (26-91)||(24449616-24449681)
chr1 (1-84)||(27031501-27031585)
chr1 (1-86)||(14320658-14320744)
chr1 (26-91)||(5389109-5389174)
chr1 (38-87)||(24659264-24659313)
chr1 (26-91)||(24684179-24684243)
chr1 (40-91)||(46692519-46692570)
chr1 (28-91)||(41920787-41920850)
[»] chr4 (19 HSPs)
chr4 (26-91)||(4306035-4306099)
chr4 (1-91)||(30964767-30964858)
chr4 (6-91)||(20464919-20465005)
chr4 (28-91)||(35329337-35329400)
chr4 (26-91)||(27555617-27555682)
chr4 (31-87)||(31050352-31050408)
chr4 (26-86)||(46698465-46698525)
chr4 (28-87)||(52868800-52868859)
chr4 (1-90)||(7703018-7703107)
chr4 (28-86)||(49528421-49528479)
chr4 (26-84)||(2826118-2826176)
chr4 (26-84)||(35341039-35341097)
chr4 (29-91)||(36689494-36689556)
chr4 (26-91)||(11281411-11281476)
chr4 (28-91)||(8255357-8255420)
chr4 (28-91)||(8268775-8268838)
chr4 (29-91)||(8705829-8705891)
chr4 (1-72)||(9750116-9750187)
chr4 (1-55)||(30167223-30167278)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-84)||(19255-19339)
[»] chr8 (22 HSPs)
chr8 (1-84)||(35815904-35815988)
chr8 (1-91)||(12897936-12898027)
chr8 (1-91)||(31207022-31207113)
chr8 (27-91)||(41893093-41893156)
chr8 (28-91)||(16457163-16457226)
chr8 (1-91)||(20138756-20138847)
chr8 (1-91)||(22773951-22774042)
chr8 (26-91)||(9519836-9519901)
chr8 (26-91)||(24995081-24995146)
chr8 (26-91)||(27889176-27889241)
chr8 (26-91)||(27947834-27947899)
chr8 (26-91)||(32065971-32066035)
chr8 (26-91)||(36631153-36631217)
chr8 (29-87)||(3584071-3584130)
chr8 (1-87)||(15821037-15821123)
chr8 (1-91)||(37986515-37986606)
chr8 (37-91)||(35821585-35821639)
chr8 (26-87)||(10837923-10837984)
chr8 (44-91)||(34388711-34388758)
chr8 (31-76)||(38577477-38577522)
chr8 (26-82)||(13538324-13538380)
chr8 (26-82)||(13686094-13686150)
[»] scaffold0434 (1 HSPs)
scaffold0434 (26-91)||(2359-2424)
[»] chr2 (17 HSPs)
chr2 (1-87)||(14106183-14106269)
chr2 (1-83)||(14436927-14437010)
chr2 (26-88)||(39338547-39338609)
chr2 (30-91)||(387506-387567)
chr2 (28-90)||(14405530-14405591)
chr2 (26-91)||(10524428-10524493)
chr2 (1-84)||(5254590-5254673)
chr2 (1-84)||(43248887-43248971)
chr2 (1-84)||(43816107-43816191)
chr2 (6-87)||(17116553-17116635)
chr2 (26-86)||(3745676-3745736)
chr2 (27-87)||(7874610-7874670)
chr2 (1-88)||(41877212-41877300)
chr2 (1-87)||(7461010-7461096)
chr2 (1-85)||(13512499-13512584)
chr2 (3-72)||(7455601-7455670)
chr2 (37-86)||(45311501-45311550)
[»] chr6 (5 HSPs)
chr6 (26-91)||(10542161-10542226)
chr6 (1-91)||(3254287-3254378)
chr6 (32-86)||(33697789-33697843)
chr6 (26-91)||(15944329-15944394)
chr6 (28-91)||(3117824-3117887)
[»] scaffold0085 (1 HSPs)
scaffold0085 (27-91)||(48665-48729)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-91)||(6035-6126)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 8e-95; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 40 - 300
Target Start/End: Original strand, 41250893 - 41251154
Alignment:
Q  40 aaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaatattattaatttatttgttttcattatnnnnnnnnnnnnnnnnnn-tt 138  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||                   ||    
T  41250893 aaacaagatataaatggtgccgcatatagacggtacaccataaccacgtaaatattattaatttatttgttttcattataaaaaaagaaaaatcaaaatt 41250992  T
Q  139 ttggtttggagactcttgtgattatggccttaacttttggtttgcatggatttatgcaaacacgaaggaacatgtgataagaacaagttggctttaattt 238  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41250993 ttggtttggagactcttgtgattatggtcttatcttttggtttgcatggatttatgcaaacacgaaggaacatgtgataagaacaagttggctttaattt 41251092  T
Q  239 gcagctatactaaggataatactttgtttttaacgataagcataatcttttgttatgatact 300  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  41251093 gcagctatactaaggataatactttgtttttgacgataagcataatattttgttatgatact 41251154  T

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Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18593663 - 18593572
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  18593663 attattaaacgtcatccccgcaagatgcaaggtatggacgaaacaagataaatatggtgccgcatatagacggtacaccataaccacctaaa 18593572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7453009 - 7452918
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||||||||  |||| | |||||||||| || || ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  7453009 attattaaacatcatccatgcaagacgcaaggtatggacaaatcaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 7452918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 29087873 - 29087808
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  29087873 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacatcataaccacctaaa 29087808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 5656779 - 5656844
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||||||||  |||||||||||||    
T  5656779 gcaaggtatgaacgaaataagatacaaatgatgccgcatatagacggtacatgataaccacctaaa 5656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 7161700 - 7161765
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| |||| |||||| |||||| |||| |||| |||||||||||||||||||||| ||||||||    
T  7161700 gcaagatatggacgaaataagatacaaatagtgtagcatatagacggtacaccataatcacctaaa 7161765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 34378494 - 34378429
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||| ||| |||| || ||||| |||||||| |||||||||||||||||||||||||| |||||    
T  34378494 gcaaggcatggacgagacgagatacaaatggtgccgcatatagacggtacaccataaccatctaaa 34378429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 698760 - 698697
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| | |||| | |||| |||||||| |||||||||||||||||| |||||||||||||    
T  698760 aaggtatggatgaaatatgatacaaatggtgccgcatatagacggtacactataaccacctaaa 698697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 18313340 - 18313393
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacacca 79  Q
    |||||||||| | ||||||||||  |||||||| ||||||||||||||||||||    
T  18313340 gcaaggtatggatgaaacaagatgcaaatggtgccgcatatagacggtacacca 18313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 18255147 - 18255192
Alignment:
Q  37 acgaaacaagatataaatggtgtcgcatatagacggtacaccataa 82  Q
    ||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  18255147 acgaaacaagatacaaatagtgccgcatatagacggtacatcataa 18255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2392163 - 2392254
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  2392163 attattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 2392254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2393926 - 2394017
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  2393926 attattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 2394017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45164274 - 45164183
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||| |||| ||||| | |||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  45164274 attattaaacattatccccgcaagatgcaaggtatggactaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 45164183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31483301 - 31483210
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||| ||||| | ||| | ||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  31483301 attattaaacaccatccccacaagacgcaaggtatgaacaaaacaagatacaaatggtgctgcatatagacggtacaccataaccacctaaa 31483210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34475418 - 34475508
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaa 90  Q
    |||||||||| |||||| ||||| | ||| |||||||||||||||||||| |||||||| | ||||||||||||| |||||||||||||||    
T  34475418 attattaaacgtcatccccgcaagacgcagggtatgaacgaaacaagatacaaatggtgccccatatagacggtataccataaccacctaa 34475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 23328034 - 23328095
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23328034 gcaaggtatggacgaaacaagatataaatggtgccgcatatatacggtacaccataaccacc 23328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 30352125 - 30352190
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  30352125 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagaaggtacaccataaccacctaaa 30352190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 43012772 - 43012707
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||    
T  43012772 gcaaggtatgaacgaaacaatatacaaatggtgccgcatatagacgatacaccataaccacctaaa 43012707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 21343741 - 21343678
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaa 90  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  21343741 caaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacatcataaccacctaa 21343678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40023229 - 40023316
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||||||||| ||||| | |||  ||||| ||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  40023229 attattaaacatcatccccgcaagacgcattgtatggacgaaacaagatacaaatgatgccgcatatagacggtacaccataaccacc 40023316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 50305260 - 50305319
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacca 85  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  50305260 gcaaggtatggacggaacaagatacaaatggtgtcgcatatagacggtacaccataacca 50305319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 45399177 - 45399119
Alignment:
Q  29 aggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  45399177 aggtatgaacgaaacaagatacaaacggtgccgcatatagacggtacaccataaccacc 45399119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 17551348 - 17551287
Alignment:
Q  30 ggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||    
T  17551348 ggtatgaacgaaacaaaatacaaatggtgccgcatatagactgtacaccataaccacctaaa 17551287  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 47236093 - 47236028
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||||| |||||    
T  47236093 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtataccataaccatctaaa 47236028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 9583740 - 9583804
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||  ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  9583740 caaggtatagacgaaacaagatacaaatggtgccgcatatagacgatacaccataaccacctaaa 9583804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 19176901 - 19176836
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||| ||||| |||||||| |||| |||||||| |||||||||||||||||||||||| |||||||    
T  19176901 gcaaagtatggacgaaacatgatacaaatggtgccgcatatagacggtacaccataacgacctaaa 19176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 25506730 - 25506814
Alignment:
Q  1 attattaaacatcatcctcgcaaaagc-aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    ||||||||||||||||| ||||| | | ||| ||| ||| |||||| ||| |||||||| |||||||||||||||||||||||||    
T  25506730 attattaaacatcatccccgcaagacccaagatataaacaaaacaatatacaaatggtgccgcatatagacggtacaccataacc 25506814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50560065 - 50559978
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||| |||||||||||| | ||||| |||| ||||||||||||| ||| | || |||| ||||||||| |||||||||||||    
T  50560065 attattaaacgtcatcctcgcaatacgcaagatatggacgaaacaagatacaaaagatgccgcacatagacggtgcaccataaccacc 50559978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 53248293 - 53248230
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| || |||||||||| ||||||||||||||||||   |||||||||||||| |||||    
T  53248293 aaggtatggacaaaacaagatacaaatggtgtcgcatataggttgtacaccataaccatctaaa 53248230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 4463782 - 4463831
Alignment:
Q  37 acgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    ||||||||| | | |||||||| |||||||||||||| ||||||||||||    
T  4463782 acgaaacaacacacaaatggtgccgcatatagacggtgcaccataaccac 4463831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31971795 - 31971886
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||| ||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  31971795 attattaaacgccatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 31971886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47325545 - 47325636
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||| || | |||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  47325545 attattaaacgtcatcctcgtaagacgcaaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacctaaa 47325636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 38306655 - 38306590
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38306655 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 38306590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5859943 - 5860034
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | ||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  5859943 attattaaacgtcatccccgcaagacgcatgatatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 5860034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 10244575 - 10244510
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  10244575 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacagtacaccataaccacctaaa 10244510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 25161201 - 25161138
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||||||||||||  |||||||| || |||||||||||||||||||||||||||||    
T  25161201 aaggtatgaacgaaacaagatgcaaatggtgccgtatatagacggtacaccataaccacctaaa 25161138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 42454394 - 42454485
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||||||||| ||||| | ||||| |||  |||||||||| || |||||||| ||||||||||| ||||||||||||||||||||    
T  42454394 attattaaacatcatccccgcaagacgcaagatatagacgaaacaaggtacaaatggtgccgcatatagacagtacaccataaccacctaaa 42454485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44353224 - 44353315
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||| ||||| | |||| ||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  44353224 attattaaacgccatccccgcaagacgcaaagtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacctaaa 44353315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 41089431 - 41089494
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  41089431 caaggtatggacgaaacaagatacaa-tggtgccgcatatagacggtacaccataaccacctaaa 41089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6585307 - 6585220
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||  ||||| ||||| | |||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||    
T  6585307 attattaaacgccatccccgcaagatgcaaggaatggacgaaacaagatacaaatggtgccacatatagacggtacaccataaccacc 6585220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 37795391 - 37795326
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| ||||||||||||   || |||||||||||||||||||||||    
T  37795391 gcaaggtatggacgaaacaagatacaaatggtgtcgcgattaaacggtacaccataaccacctaaa 37795326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 37795719 - 37795654
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| ||||||||||||   || |||||||||||||||||||||||    
T  37795719 gcaaggtatggacgaaacaagatacaaatggtgtcgcgattaaacggtacaccataaccacctaaa 37795654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3419059 - 3419148
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| ||| | || ||||||  ||||||||||||||||||||||||    
T  3419059 attattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaacgttgccgcata--gacggtacaccataaccacctaaa 3419148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33434491 - 33434582
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||| ||||| | |||||||||| ||||| ||||||| |||||||   | |||||||||||||||||||||||||||||    
T  33434491 attattaaacgccatccccgcaatacgcaaggtatggacgaagcaagatacaaatggttctgtatatagacggtacaccataaccacctaaa 33434582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43482325 - 43482235
Alignment:
Q  1 attattaaacatcatcctcgcaaaagcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| || | | |||||||||| |||||| |||||| |||| |||  ||||| ||||||||||||| |||||||||||    
T  43482325 attattaaacgtcatccccgtagacgcaaggtatggacgaaataagatacaaatagtgctgcatacagacggtacaccacaaccacctaaa 43482235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 3867508 - 3867453
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataac 83  Q
    |||||||  ||||||||||||| |||||||| | ||||||||||||||||||||||    
T  3867508 aaggtattgacgaaacaagatacaaatggtgccacatatagacggtacaccataac 3867453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34391603 - 34391516
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||| |||||| ||||  | ||| |||||| ||||||||||||| ||||  || |||||||||||| |||||||||||||||    
T  34391603 attattaaacgtcatccccgcaggacgcagggtatggacgaaacaagatacaaataatgccgcatatagacgatacaccataaccacc 34391516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 3419344 - 3419407
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| ||| | || ||||||  ||||||||||||||||||||||||    
T  3419344 gcaaggtatggacgaaacaagatacaaacgttgccgcata--gacggtacaccataaccacctaaa 3419407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35745492 - 35745555
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgca 63  Q
    |||||||||| |||||  || |||| |||||||||| ||||||||||||| |||||||||||||    
T  35745492 attattaaacgtcatctccgtaaaacgcaaggtatggacgaaacaagatacaaatggtgtcgca 35745555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 40726202 - 40726256
Alignment:
Q  37 acgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||| ||| ||||| ||   ||||||||||||||||||||||||||||||    
T  40726202 acgaaacaaaatacaaatgatgctacatatagacggtacaccataaccacctaaa 40726256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 48161741 - 48161790
Alignment:
Q  41 aacaagatataaatggtgtcgcatatagacggtacaccataaccacctaa 90  Q
    ||||| ||| |||| ||| ||||||||||||| |||||||||||||||||    
T  48161741 aacaaaatacaaatagtgccgcatatagacggcacaccataaccacctaa 48161790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30685584 - 30685675
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  30685584 attattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacctaaa 30685675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31584700 - 31584790
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||| ||||||||||| | ||||||||||| |||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  31584700 attattaaacaccatcctcgcaagacgcaaggtatga-cgaaacaagatacaaatggtgccgcatatagacgatacaccataaccacctaaa 31584790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7002608 - 7002517
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||||||||||| | |||||||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||| ||||    
T  7002608 attattaaacgtcatcctcgcaaaatgtaaggtatggacgaaacaagatacaaaaggtgccgcatataaacggtacaccataaccacttaaa 7002517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46814125 - 46814212
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||  ||||||||||| | | |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  46814125 attattaaacgccatcctcgcaagacgtaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacc 46814212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40216166 - 40216257
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||||||||| | || || |||| ||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  40216166 attattaaacgtcatcctcgcaagacgccagatatggacgaatcaagatacaaatggtgccgcatatagacggtacatcataaccacctaaa 40216257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 5459555 - 5459490
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||    
T  5459555 gcaaggtatggacgaagcaacatacaaatggtgccgcatatagacggtacaccataaccacctaaa 5459490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 6804932 - 6804868
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  6804932 gcaaggtatggacgaaa-aagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 6804868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 24449616 - 24449681
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||    
T  24449616 gcaaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacataaa 24449681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27031501 - 27031585
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| |||||||||||| | ||||| |||| ||| ||||| |||||||||||| |||||||| ||||||||||||||||    
T  27031501 attattaaacgtcatcctcgcaagacgcaagatatggacggaacaatatataaatggtgccgcatatatacggtacaccataacc 27031585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14320744 - 14320658
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    |||||||||| |||||| | ||| | |||||||||| || |||| | ||| ||||||||||||||||||||||||||||||||||||    
T  14320744 attattaaacgtcatccccacaagatgcaaggtatggacaaaaccaaatacaaatggtgtcgcatatagacggtacaccataaccac 14320658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 5389109 - 5389174
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| |||||| |||||||| ||||||||||||| |||| |||||||||||||    
T  5389109 gcaaggtatggacgaaataagatacaaatggtgccgcatatagacggcacactataaccacctaaa 5389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 24659313 - 24659264
Alignment:
Q  38 cgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  24659313 cgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacc 24659264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 24684179 - 24684243
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||||| |||||||||| |||||||| | ||||||||||||||||||||| ||||||||    
T  24684179 gcaaggtatgaac-aaacaagatacaaatggtgccacatatagacggtacaccataatcacctaaa 24684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 46692519 - 46692570
Alignment:
Q  40 aaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  46692519 aaacaagataaaaatggtgccgcataaagacggtacaccataaccacctaaa 46692570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 41920850 - 41920787
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| |||||| || ||| |||| |||  |||||||||||||||||| ||||||||||||    
T  41920850 aaggtatggacgaaataaaatacaaattgtgctgcatatagacggtacaccgtaaccacctaaa 41920787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 4306099 - 4306035
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4306099 gcaaggtatgaacgaaa-aagatataaatggtgccgcatatagacggtacaccataaccacctaaa 4306035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30964858 - 30964767
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||| |||||  |||| | |||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  30964858 attattaaacaccatccctgcaagacgcaaggtatggacgaaacaagatacaaatgatgttgcatatagacggtacaccataaccacctaaa 30964767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 20465005 - 20464919
Alignment:
Q  6 taaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| |||||||| ||| | |||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  20465005 taaacgtcatcctcacaagatgcaaggtatgaaagaaacaagatacaaatggtgccgtatatagacggtacaccataaccacctaaa 20464919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 35329400 - 35329337
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  35329400 aaggtatggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacctaaa 35329337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 27555617 - 27555682
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  27555617 gcaaggtatggacgaaacaagatacaaattgtgccgcatatagatggtacaccataaccacctaaa 27555682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 31050352 - 31050408
Alignment:
Q  31 gtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  31050352 gtatggacgaaacaagatacaaatgatgtcgcatatagacggtacaccataaccacc 31050408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 46698465 - 46698525
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    ||||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  46698465 gcaaggtatggtcgaaacaagatacaaatggtgccgcatatagacggtacaccataaccac 46698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 52868800 - 52868859
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||||    
T  52868800 aaggtatgaacgaattaagatacaaatggtgtcgcgtatagacggtacaccataaccacc 52868859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7703107 - 7703018
Alignment:
Q  1 attattaaacatcatcctcgcaaaag-caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaa 90  Q
    |||||||||| |||||| ||||| |  ||||||||| | |||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  7703107 attattaaacgtcatccccgcaagacacaaggtatggatgaaa-aagatacaaatggtgccgcatatagacggtacaccataaccacctaa 7703018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 49528479 - 49528421
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  49528479 aaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccaaaaccac 49528421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 2826176 - 2826118
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||    
T  2826176 gcaaggtatggacggaacaagatacaaatggtgccgcatatatacggtacaccataacc 2826118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 35341039 - 35341097
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||| ||||| ||||||||||||| |||||||| | |||||||||||||||||||||||    
T  35341039 gcaatgtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataacc 35341097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 36689494 - 36689556
Alignment:
Q  29 aggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||| |||||| |||||| ||||||| ||||||||||||||||||| |||||||| ||||    
T  36689494 aggtatggacgaaataagatacaaatggtatcgcatatagacggtacactataaccacttaaa 36689556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 11281411 - 11281476
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| |||| |||||||| |||||||||||||  | |||||||||||| ||||||||||||||||    
T  11281411 gcaagatatggacgaaacatgatataaatggtgctgtatatagacggtataccataaccacctaaa 11281476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 8255420 - 8255357
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| || |||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||    
T  8255420 aaggtgtggacgagacaagatacaaatgatgccgcatatagacggtacatcataaccacctaaa 8255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 8268838 - 8268775
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| || |||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||    
T  8268838 aaggtgtggacgagacaagatacaaatgatgccgcatatagacggtacatcataaccacctaaa 8268775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 8705829 - 8705891
Alignment:
Q  29 aggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||| ||||  || |||| ||||||||  |||||||||||||||||||||||||||||||    
T  8705829 aggtatggacgaggcaggatacaaatggtgctgcatatagacggtacaccataaccacctaaa 8705891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9750187 - 9750116
Alignment:
Q  1 attattaaacatcatcctcgcaaaagcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacgg 72  Q
    |||||||||| |||||| ||||| |   |||| || ||||||||||||| |||||||| |||||||||||||    
T  9750187 attattaaacgtcatccccgcaagacgcaggtttggacgaaacaagatacaaatggtgccgcatatagacgg 9750116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30167223 - 30167278
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatg 55  Q
    |||||||||| |||||||||||| | |||||||||| ||||||||||||| |||||    
T  30167223 attattaaacgtcatcctcgcaagacgcaaggtatggacgaaacaagatacaaatg 30167278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19339 - 19255
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| |||||||||||| | ||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  19339 attattaaacgtcatcctcgcaagacgcatggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataacc 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35815904 - 35815988
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    ||||||||||  ||||||||||||| |||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||    
T  35815904 attattaaacgccatcctcgcaaaacgcaaggtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataacc 35815988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12897936 - 12898027
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | ||||| |||| ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  12897936 attattaaacgtcatccccgcaagatgcaagatatggacgaaacaagatacaaatggtgccgcatatagacggtacaccattaccacctaaa 12898027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31207022 - 31207113
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||||||||| | |||||||||| ||||||||||||| |||||||| || ||||| |||||||||||||||||||||||    
T  31207022 attattaaacgccatcctcgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgtatataaacggtacaccataaccacctaaa 31207113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 41893093 - 41893156
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  41893093 caaggtatgaacgaaaaaa-atacaaatggtgtcgcatatagacggtacaccataaccacctaaa 41893156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 16457163 - 16457226
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  16457163 aaggtatggacgaaacaagatacaaatggtgccacatatagacggtacaccataaccacctaaa 16457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20138847 - 20138756
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||| ||||| | |||| ||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  20138847 attattaaacgccatccccgcaagacgcaaagtatggacgaaacaagatacaaatggtgccgcatatagatggtacaccataaccacctaaa 20138756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22774042 - 22773951
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||||||||  ||||| ||||| | |||||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||    
T  22774042 attattaaacgccatccccgcaagacgcaaggtatggacgaaactagatacaaatggtgccgcatatagacggtacaccataaccatctaaa 22773951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 9519901 - 9519836
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||    
T  9519901 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacagtacatcataaccacctaaa 9519836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 24995081 - 24995146
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||    
T  24995081 gcaaggtatggacgaaacaagatacaaatggtgccgcttatagacagtacaccataaccacctaaa 24995146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 27889241 - 27889176
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  27889241 gcaaggtattgacgaaacaagatacaaatggtgccgcatatagactgtacaccataaccacctaaa 27889176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 27947899 - 27947834
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  27947899 gcaaggtattgacgaaacaagatacaaatggtgccgcatatagactgtacaccataaccacctaaa 27947834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 32065971 - 32066035
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  32065971 gcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtaca-cataaccacctaaa 32066035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 36631217 - 36631153
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  36631217 gcaaggtatgaa-gaaacaagatacaaatggtgccgcatatagacggtacaccataatcacctaaa 36631153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 3584130 - 3584071
Alignment:
Q  29 aggtatgaacgaaacaa-gatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||    
T  3584130 aggtatgaacgaaacaaagatacaaatggtgccgcatatagacggtacaccataaccacc 3584071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15821037 - 15821123
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||| ||||||| |||| | |||||||||| ||| ||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  15821037 attattaaacgtcatcct-gcaagacgcaaggtatggacggaacaagatacaaatggtgccgcatatagacggtataccataaccacc 15821123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37986515 - 37986606
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||  |||||| ||||| | |||||| | | ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  37986515 attattaaatgtcatccccgcaagacgcaaggcacggacgaaacaagatacaaatggtgctgcatatagacggtacaccataaccacctaaa 37986606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 35821639 - 35821585
Alignment:
Q  37 acgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| |||| ||||| || ||||||||||||||||||||||||||| ||||    
T  35821639 acgaaacatgatacaaatgatgccgcatatagacggtacaccataaccacttaaa 35821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 10837923 - 10837984
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||| |||||| ||| |||||  |||| ||| ||||||||||||||||||||||||||||    
T  10837923 gcaaggaatgaacaaaataagatgcaaatcgtgccgcatatagacggtacaccataaccacc 10837984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 34388711 - 34388758
Alignment:
Q  44 aagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||| |||| |||  |||||||||||||||||||||||||||||||    
T  34388711 aagatacaaatagtgctgcatatagacggtacaccataaccacctaaa 34388758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 38577477 - 38577522
Alignment:
Q  31 gtatgaacgaaacaagatataaatggtgtcgcatatagacggtaca 76  Q
    ||||||||||||||| ||| ||||| || |||||||||||||||||    
T  38577477 gtatgaacgaaacaatatacaaatgatgccgcatatagacggtaca 38577522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 13538380 - 13538324
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataa 82  Q
    |||||||||| |||||| || ||| |||||||  ||||||||||||||||| |||||    
T  13538380 gcaaggtatggacgaaagaatatacaaatggtaccgcatatagacggtacatcataa 13538324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 13686094 - 13686150
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataa 82  Q
    |||||||||| |||||| || ||| |||||||  ||||||||||||||||| |||||    
T  13686094 gcaaggtatggacgaaagaatatacaaatggtaccgcatatagacggtacatcataa 13686150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 2359 - 2424
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||    
T  2359 gcaaggtatggacgaaacaagatacagatggtgccgcatatagacggtacaccataaccacctaaa 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14106183 - 14106269
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||||  ||||||||||| | ||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14106183 attattaaacgccatcctcgcaagacgcagggtatga-cgaaacaagatagaaatggtgccgcatatagacggtacaccataaccacc 14106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14436927 - 14437010
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataac 83  Q
    ||||||||||  ||||| ||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14436927 attattaaacgccatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataac 14437010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 39338547 - 39338609
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacct 88  Q
    |||| ||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  39338547 gcaatgtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacct 39338609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 387567 - 387506
Alignment:
Q  30 ggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  387567 ggtatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccacttaaa 387506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 14405591 - 14405530
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaa 90  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  14405591 aaggtatgaacgaa-caagatacaaatggtgctgcatatagacggtacaccataaccacctaa 14405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 10524493 - 10524428
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||||||||| ||| ||||||||  ||||||||| |||||||||||||||||||||    
T  10524493 gcaaggtatggacgaaacaatatacaaatggtgcagcatatagatggtacaccataaccacctaaa 10524428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5254673 - 5254590
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| |||||||||||| | | |||||||| |||||| | |||| |||||||| |||||||||||||||||||||||||    
T  5254673 attattaaacgtcatcctcgcaagacgtaaggtatggacgaaata-gatacaaatggtgccgcatatagacggtacaccataacc 5254590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43248887 - 43248971
Alignment:
Q  1 attattaaacatcatcctcgcaaaag-caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| |||||||| ||| |  ||||||||| |||||||||||||||||||| | ||||||||||||||| | |||||||    
T  43248887 attattaaacgtcatcctcacaagacacaaggtatggacgaaacaagatataaatggcgccgcatatagacggtatatcataacc 43248971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43816107 - 43816191
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacc 84  Q
    |||||||||| |||| | ||||||| |||||||||| |||||||||  || ||||| || |||||||||||||||||||||||||    
T  43816107 attattaaacgtcattcccgcaaaacgcaaggtatggacgaaacaaagtacaaatgatgccgcatatagacggtacaccataacc 43816191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 17116553 - 17116635
Alignment:
Q  6 taaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||| |||||| ||||| | |||||||||| |||| |||||||| ||||| || |||||||||||||||||| |||||||||    
T  17116553 taaacgtcatccccgcaagacgcaaggtatggacgagacaagatacaaatgatgccgcatatagacggtacactataaccacc 17116635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 3745736 - 3745676
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||| |||||| |||||||||    
T  3745736 gcaaggtatggacgaaacaagatacaaatggtgctgcatatagatggtacatcataaccac 3745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 7874670 - 7874610
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    ||||||||  || |||||||||| |||||| | ||||||||||||||||||||||||||||    
T  7874670 caaggtatagacaaaacaagatacaaatggcgccgcatatagacggtacaccataaccacc 7874610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41877212 - 41877300
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacct 88  Q
    ||||||||||  ||||| ||||| | ||||| |||| ||||||||| ||| |||||||  || ||||||||||||||||||||||||||    
T  41877212 attattaaactccatccccgcaagacgcaagatatggacgaaacaatatacaaatggtaccgtatatagacggtacaccataaccacct 41877300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7461096 - 7461010
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacc 87  Q
    |||||||||| |||||| ||||| | |||  |||||| |||||||| ||| ||||||||| |||||||||| ||||||||||||||||    
T  7461096 attattaaacgtcatccccgcaagacgcagagtatga-cgaaacaaaatacaaatggtgttgcatatagacagtacaccataaccacc 7461010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13512499 - 13512584
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataacca 85  Q
    |||||||||| |||| | ||||| | |||| ||||| ||||||||| ||| ||||| || ||||||||||||||||| ||||||||    
T  13512499 attattaaacgtcattcccgcaagacgcaatgtatggacgaaacaaaatacaaatgatgccgcatatagacggtacaacataacca 13512584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 7455670 - 7455601
Alignment:
Q  3 tattaaacatcatcctcgcaaaagcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacgg 72  Q
    |||||||| |||||| ||||| |   |||||||||||||| |||||| |||||||| |||| ||||||||    
T  7455670 tattaaacgtcatccccgcaagacgcaggtatgaacgaaataagatacaaatggtgccgcaaatagacgg 7455601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 45311501 - 45311550
Alignment:
Q  37 acgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    ||||||||||||| |||||||| | |||||| |||| |||||||||||||    
T  45311501 acgaaacaagatacaaatggtgccacatatatacggaacaccataaccac 45311550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 10542226 - 10542161
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||    
T  10542226 gcaagatatgaacgaaacaagatacaaaaggtgccgcatatagacgatacaccataaccacctaaa 10542161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3254378 - 3254287
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | |||||||||| ||||||||||||| |||||||| || |||||||  |||||||||| |||||||||    
T  3254378 attattaaacgtcatccccgcaagacgcaaggtatggacgaaacaagatacaaatggtgccgtatatagatagtacaccatagccacctaaa 3254287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 33697789 - 33697843
Alignment:
Q  32 tatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccac 86  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  33697789 tatggacgaaacaagatacaaatggtgccgcatatagacggtacaccataaccac 33697843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 15944394 - 15944329
Alignment:
Q  26 gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| ||  || |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  15944394 gcaaggtatggacagaagaagatacaaatggtgtcgcatatagacggtacaccataaacacctaaa 15944329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 3117887 - 3117824
Alignment:
Q  28 aaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||| |||||| |||||| ||||||||  ||||||||||| |||||||||||||||||||    
T  3117887 aaggtatggacgaaataagatacaaatggtgcagcatatagacgctacaccataaccacctaaa 3117824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 48729 - 48665
Alignment:
Q  27 caaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||| |||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  48729 caagatatggactaaacaagatacaaatggtgccgcatatagacggtacaccataaccacctaaa 48665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6126 - 6035
Alignment:
Q  1 attattaaacatcatcctcgcaaaa-gcaaggtatgaacgaaacaagatataaatggtgtcgcatatagacggtacaccataaccacctaaa 91  Q
    |||||||||| |||||| ||||| | ||||| ||||||||| |||||||| |||||||| || ||||||||| |||| ||||||||||||||    
T  6126 attattaaacgtcatccccgcaagacgcaagatatgaacgagacaagatacaaatggtgccgtatatagacgttacatcataaccacctaaa 6035  T

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