View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11506_high_4 (Length: 270)

Name: NF11506_high_4
Description: NF11506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11506_high_4
NF11506_high_4
[»] chr8 (40 HSPs)
chr8 (8-208)||(29023108-29023309)
chr8 (22-117)||(25698012-25698107)
chr8 (22-117)||(44926802-44926897)
chr8 (12-102)||(3097249-3097339)
chr8 (8-110)||(42148973-42149075)
chr8 (13-117)||(41289102-41289206)
chr8 (8-102)||(28425511-28425605)
chr8 (8-117)||(4941820-4941929)
chr8 (14-110)||(33627079-33627175)
chr8 (22-102)||(36114093-36114173)
chr8 (23-102)||(27649722-27649801)
chr8 (13-104)||(43550865-43550956)
chr8 (13-99)||(3467512-3467598)
chr8 (22-116)||(8124933-8125027)
chr8 (13-104)||(6399152-6399243)
chr8 (32-99)||(41981136-41981203)
chr8 (8-91)||(42143403-42143486)
chr8 (12-102)||(34342896-34342985)
chr8 (15-102)||(38152220-38152307)
chr8 (13-103)||(22936837-22936927)
chr8 (22-92)||(24897640-24897710)
chr8 (13-104)||(440233-440324)
chr8 (13-104)||(40742098-40742189)
chr8 (12-73)||(26243129-26243190)
chr8 (16-100)||(11126494-11126578)
chr8 (16-104)||(26125546-26125634)
chr8 (13-104)||(40742339-40742428)
chr8 (66-104)||(26243065-26243103)
chr8 (43-104)||(16915035-16915096)
chr8 (41-102)||(45147322-45147383)
chr8 (65-117)||(3619164-3619216)
chr8 (69-104)||(37458403-37458438)
chr8 (65-99)||(24297687-24297721)
chr8 (13-117)||(15206657-15206761)
chr8 (22-102)||(38114421-38114501)
chr8 (65-100)||(41891915-41891950)
chr8 (66-104)||(35615683-35615721)
chr8 (44-117)||(31246390-31246463)
chr8 (64-104)||(26575809-26575849)
chr8 (63-99)||(30081744-30081780)
[»] chr5 (38 HSPs)
chr5 (8-208)||(41740629-41740829)
chr5 (22-117)||(32454504-32454599)
chr5 (13-103)||(40885191-40885282)
chr5 (13-117)||(3667821-3667925)
chr5 (22-102)||(13253132-13253212)
chr5 (13-104)||(22482169-22482260)
chr5 (13-117)||(35760156-35760260)
chr5 (22-101)||(2430346-2430425)
chr5 (8-93)||(39988003-39988088)
chr5 (15-104)||(40495401-40495489)
chr5 (12-104)||(3060264-3060354)
chr5 (8-99)||(7385968-7386059)
chr5 (13-104)||(41834872-41834963)
chr5 (12-102)||(10058056-10058146)
chr5 (13-102)||(32030698-32030785)
chr5 (15-99)||(8049094-8049178)
chr5 (22-104)||(33953951-33954033)
chr5 (15-104)||(9275527-9275616)
chr5 (13-104)||(27021108-27021199)
chr5 (16-84)||(28869547-28869615)
chr5 (13-104)||(4292129-4292220)
chr5 (21-104)||(16158514-16158597)
chr5 (22-104)||(40791119-40791201)
chr5 (22-104)||(42146288-42146370)
chr5 (13-98)||(5710427-5710511)
chr5 (49-102)||(7714922-7714975)
chr5 (49-102)||(24045813-24045866)
chr5 (49-104)||(16843518-16843573)
chr5 (43-101)||(2694831-2694889)
chr5 (65-117)||(3747683-3747735)
chr5 (65-109)||(31215467-31215511)
chr5 (43-102)||(7178760-7178819)
chr5 (65-104)||(40979998-40980037)
chr5 (65-110)||(2861611-2861656)
chr5 (43-100)||(41959445-41959502)
chr5 (65-117)||(7071503-7071555)
chr5 (64-104)||(33082423-33082463)
chr5 (41-93)||(34107016-34107068)
[»] chr2 (35 HSPs)
chr2 (8-208)||(23358127-23358329)
chr2 (22-117)||(7472724-7472819)
chr2 (14-121)||(44619104-44619211)
chr2 (13-104)||(9988543-9988634)
chr2 (13-121)||(28127329-28127437)
chr2 (13-117)||(2213468-2213572)
chr2 (22-102)||(39141520-39141600)
chr2 (22-104)||(5916292-5916374)
chr2 (22-104)||(36312252-36312334)
chr2 (8-121)||(2215212-2215323)
chr2 (22-104)||(14821138-14821220)
chr2 (13-98)||(1945081-1945166)
chr2 (22-117)||(42516026-42516121)
chr2 (13-103)||(25940283-25940373)
chr2 (48-104)||(8170288-8170344)
chr2 (40-104)||(31562753-31562817)
chr2 (13-103)||(7296131-7296221)
chr2 (13-99)||(27911386-27911472)
chr2 (46-104)||(28261269-28261327)
chr2 (43-104)||(2234902-2234962)
chr2 (15-103)||(7295392-7295478)
chr2 (13-118)||(26207971-26208076)
chr2 (41-104)||(28641617-28641680)
chr2 (42-105)||(32501960-32502023)
chr2 (22-99)||(3602510-3602587)
chr2 (15-104)||(3853875-3853964)
chr2 (13-102)||(36548177-36548265)
chr2 (13-91)||(42089570-42089652)
chr2 (15-99)||(16467066-16467150)
chr2 (63-117)||(18511064-18511118)
chr2 (15-100)||(43436325-43436410)
chr2 (13-69)||(31224690-31224746)
chr2 (13-68)||(2213658-2213713)
chr2 (43-102)||(25747953-25748012)
chr2 (67-104)||(37640236-37640273)
[»] chr1 (40 HSPs)
chr1 (8-198)||(291757-291938)
chr1 (22-103)||(43728931-43729012)
chr1 (22-102)||(12247412-12247492)
chr1 (15-117)||(12468190-12468291)
chr1 (13-102)||(35536064-35536152)
chr1 (13-104)||(31223364-31223455)
chr1 (13-104)||(35569247-35569338)
chr1 (13-104)||(42850264-42850355)
chr1 (12-104)||(36205181-36205273)
chr1 (22-105)||(6166099-6166182)
chr1 (13-104)||(20800322-20800413)
chr1 (46-104)||(6464598-6464656)
chr1 (8-102)||(40229510-40229604)
chr1 (46-104)||(45710039-45710097)
chr1 (13-99)||(48510903-48510989)
chr1 (13-102)||(1199819-1199908)
chr1 (13-104)||(4369847-4369938)
chr1 (13-104)||(13055988-13056078)
chr1 (46-104)||(10470580-10470638)
chr1 (42-103)||(5410631-5410692)
chr1 (22-103)||(13931614-13931695)
chr1 (13-104)||(7826399-7826490)
chr1 (22-101)||(25230000-25230079)
chr1 (13-104)||(50977385-50977475)
chr1 (22-94)||(9447533-9447605)
chr1 (44-117)||(15884203-15884276)
chr1 (42-105)||(11023403-11023466)
chr1 (49-104)||(31933717-31933772)
chr1 (13-99)||(47123381-47123467)
chr1 (15-100)||(26058235-26058320)
chr1 (43-99)||(25061221-25061277)
chr1 (13-117)||(50406107-50406211)
chr1 (65-104)||(11051407-11051446)
chr1 (46-104)||(40821815-40821873)
chr1 (13-90)||(11561826-11561903)
chr1 (65-104)||(46033210-46033249)
chr1 (15-93)||(34718452-34718530)
chr1 (65-106)||(33226233-33226274)
chr1 (15-79)||(27801699-27801763)
chr1 (62-110)||(49243099-49243147)
[»] chr7 (40 HSPs)
chr7 (22-117)||(9456079-9456174)
chr7 (22-104)||(48134567-48134649)
chr7 (12-117)||(43737969-43738074)
chr7 (13-100)||(37562561-37562648)
chr7 (12-103)||(3342778-3342869)
chr7 (8-102)||(39391163-39391257)
chr7 (13-102)||(34366013-34366101)
chr7 (13-104)||(3622491-3622582)
chr7 (13-104)||(12632114-12632205)
chr7 (13-102)||(19095926-19096013)
chr7 (13-102)||(47217572-47217661)
chr7 (22-102)||(34010329-34010409)
chr7 (13-101)||(44967430-44967518)
chr7 (13-104)||(37639417-37639508)
chr7 (13-104)||(38230055-38230146)
chr7 (47-110)||(47301622-47301685)
chr7 (15-99)||(42740384-42740468)
chr7 (13-104)||(3375477-3375568)
chr7 (13-104)||(10371989-10372080)
chr7 (13-104)||(32205914-32206003)
chr7 (13-99)||(386512-386597)
chr7 (22-104)||(43631735-43631817)
chr7 (13-99)||(48459702-48459788)
chr7 (13-104)||(47021906-47021997)
chr7 (15-117)||(40903200-40903302)
chr7 (13-99)||(3750678-3750764)
chr7 (15-100)||(32186931-32187016)
chr7 (42-102)||(34011021-34011082)
chr7 (15-100)||(41715648-41715733)
chr7 (13-93)||(42904551-42904631)
chr7 (16-79)||(37008384-37008447)
chr7 (66-99)||(37886854-37886887)
chr7 (65-104)||(4035921-4035960)
chr7 (42-97)||(36920238-36920293)
chr7 (12-99)||(39977544-39977631)
chr7 (44-99)||(43581627-43581682)
chr7 (44-99)||(46541593-46541647)
chr7 (43-101)||(1766415-1766473)
chr7 (44-89)||(12964438-12964483)
chr7 (44-117)||(39634227-39634300)
[»] chr6 (14 HSPs)
chr6 (22-117)||(13739159-13739254)
chr6 (22-117)||(13744659-13744754)
chr6 (13-117)||(29409295-29409399)
chr6 (13-99)||(10826062-10826148)
chr6 (22-102)||(31132432-31132512)
chr6 (13-104)||(16442394-16442485)
chr6 (13-104)||(16548105-16548196)
chr6 (22-104)||(6208115-6208197)
chr6 (12-104)||(33899048-33899140)
chr6 (61-104)||(17830090-17830133)
chr6 (14-117)||(699511-699613)
chr6 (42-104)||(21455848-21455910)
chr6 (65-117)||(1312535-1312587)
chr6 (42-99)||(7215546-7215603)
[»] chr4 (52 HSPs)
chr4 (22-117)||(43781571-43781666)
chr4 (13-118)||(51922877-51922982)
chr4 (13-118)||(13183094-13183199)
chr4 (13-117)||(29149351-29149455)
chr4 (22-110)||(30842077-30842165)
chr4 (22-110)||(48407750-48407838)
chr4 (13-104)||(16566256-16566347)
chr4 (13-104)||(39636736-39636827)
chr4 (13-104)||(48550471-48550562)
chr4 (13-98)||(6138664-6138749)
chr4 (13-118)||(42944942-42945047)
chr4 (13-117)||(49136460-49136564)
chr4 (13-104)||(15603311-15603402)
chr4 (22-104)||(14072454-14072536)
chr4 (13-102)||(2175191-2175280)
chr4 (13-118)||(26651892-26651997)
chr4 (13-117)||(19592275-19592379)
chr4 (12-103)||(14564189-14564280)
chr4 (46-105)||(28986971-28987030)
chr4 (13-104)||(32238103-32238193)
chr4 (21-99)||(43772175-43772253)
chr4 (23-104)||(9889388-9889469)
chr4 (12-104)||(9893662-9893754)
chr4 (13-104)||(4954095-4954186)
chr4 (13-104)||(46830113-46830204)
chr4 (13-103)||(6505153-6505243)
chr4 (46-104)||(54152996-54153054)
chr4 (15-104)||(30887199-30887288)
chr4 (21-104)||(31520423-31520505)
chr4 (22-104)||(26426167-26426249)
chr4 (21-99)||(49519686-49519764)
chr4 (15-104)||(38693999-38694088)
chr4 (13-102)||(48908228-48908315)
chr4 (15-104)||(54735696-54735785)
chr4 (12-117)||(56241878-56241983)
chr4 (43-103)||(55638861-55638921)
chr4 (13-100)||(14054806-14054893)
chr4 (13-99)||(25312671-25312757)
chr4 (13-117)||(13167463-13167567)
chr4 (13-93)||(46926010-46926090)
chr4 (65-100)||(5025484-5025519)
chr4 (43-110)||(48257048-48257115)
chr4 (13-99)||(54150482-54150568)
chr4 (44-117)||(38305949-38306022)
chr4 (15-100)||(48550172-48550257)
chr4 (61-92)||(15619579-15619610)
chr4 (65-104)||(45106359-45106398)
chr4 (42-104)||(14075966-14076028)
chr4 (65-102)||(50523350-50523387)
chr4 (43-100)||(54655205-54655262)
chr4 (76-104)||(33721971-33721999)
chr4 (13-85)||(39187704-39187776)
[»] scaffold0369 (1 HSPs)
scaffold0369 (13-117)||(8402-8506)
[»] chr3 (42 HSPs)
chr3 (13-104)||(20813112-20813203)
chr3 (15-104)||(10853313-10853402)
chr3 (22-110)||(42318290-42318378)
chr3 (15-117)||(53179802-53179903)
chr3 (22-110)||(38125494-38125582)
chr3 (12-103)||(10334105-10334196)
chr3 (13-104)||(38172351-38172442)
chr3 (13-117)||(26519617-26519721)
chr3 (12-104)||(44224728-44224820)
chr3 (13-104)||(15511420-15511510)
chr3 (13-104)||(31618931-31619022)
chr3 (22-104)||(53074869-53074951)
chr3 (15-104)||(3348209-3348298)
chr3 (15-104)||(16246140-16246229)
chr3 (13-102)||(23207112-23207199)
chr3 (22-101)||(8424782-8424861)
chr3 (13-103)||(31084175-31084264)
chr3 (46-104)||(35425300-35425358)
chr3 (46-104)||(48189518-48189576)
chr3 (13-104)||(38340772-38340862)
chr3 (13-104)||(52966853-52966944)
chr3 (42-104)||(22736947-22737009)
chr3 (46-104)||(30811608-30811666)
chr3 (15-117)||(45423814-45423916)
chr3 (43-104)||(23496290-23496351)
chr3 (15-102)||(32357479-32357566)
chr3 (23-97)||(21224963-21225037)
chr3 (46-104)||(44939491-44939549)
chr3 (12-104)||(35930704-35930796)
chr3 (60-97)||(55087593-55087630)
chr3 (42-93)||(30810018-30810069)
chr3 (13-104)||(50664725-50664815)
chr3 (50-104)||(14959685-14959739)
chr3 (65-99)||(37698485-37698519)
chr3 (13-99)||(42475680-42475766)
chr3 (12-104)||(25847999-25848090)
chr3 (64-104)||(44610311-44610350)
chr3 (65-104)||(30811290-30811329)
chr3 (65-100)||(53078328-53078363)
chr3 (13-59)||(4984592-4984638)
chr3 (43-104)||(41459039-41459099)
chr3 (64-104)||(33329436-33329476)
[»] scaffold0983 (1 HSPs)
scaffold0983 (8-100)||(2307-2399)
[»] scaffold0005 (1 HSPs)
scaffold0005 (12-103)||(253095-253186)
[»] scaffold0007 (1 HSPs)
scaffold0007 (22-104)||(29175-29257)
[»] scaffold0381 (1 HSPs)
scaffold0381 (23-104)||(9077-9158)
[»] scaffold0217 (1 HSPs)
scaffold0217 (12-103)||(2070-2161)
[»] scaffold0041 (1 HSPs)
scaffold0041 (15-117)||(46716-46818)
[»] scaffold0394 (1 HSPs)
scaffold0394 (46-104)||(5903-5966)


Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 29023309 - 29023108
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29023309 tgagatgaattggtttatatttggatacacttgtttaaaattgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgtaa 29023210  T
Q  108 aataaccaaacacctctaaacatagaatttcttatattttgtcnnnnnnntataacaattatatcacatttgccaaagctgtattttttaa-gtgtagtg 206  Q
    ||| |||||||||| ||||| ||||||||||||||||||||||        | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  29023209 aatgaccaaacacccctaaaaatagaatttcttatattttgtcaaaaaaaaaaaacaattatatcacatttgccaaagctgtattttttaacgtgtagtg 29023110  T
Q  207 at 208  Q
    ||    
T  29023109 at 29023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 25698012 - 25698107
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  25698012 ttatgtttggataaacttatttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatattaaataaccaaa 25698107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 44926897 - 44926802
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  44926897 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatgttatttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 44926802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 3097249 - 3097339
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||| ||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3097249 atgaattgatttatgtttggatatactcacttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 3097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 42149075 - 42148973
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    |||| ||||||| |||||||||||||| |||| |||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  42149075 tgaggtgaattgatttatgtttggatagacttatttaaaagtgattcgtatgagttgatgttgtttagataatttgaatcaaaattgattttgaatgtaa 42148976  T
Q  108 aat 110  Q
    |||    
T  42148975 aat 42148973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 41289102 - 41289206
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| ||||   ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  41289102 tgaattgatttatgtttggatacactttactaaaagtgattcttataggttgatgttgtttggatagtttgaatcaaaattgattttgaatgcaaaatta 41289201  T
Q  113 ccaaa 117  Q
    |||||    
T  41289202 ccaaa 41289206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 28425511 - 28425605
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||| ||||||| |||||||||||||| ||||  ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28425511 tgaggtgaattgatttatgtttggatacactttcttacaagtgattcttatgagttgacgttgtttggatagtttgaatcaaaattgattttgaa 28425605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 4941820 - 4941929
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    |||| ||||||| |||||||||||||| | || |||||||| |||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||    
T  4941820 tgaggtgaattgatttatgtttggataaaattatttaaaagcgattcttatgagttgatgttgtttgaataatttgaattaaaattgattttgaatgtaa 4941919  T
Q  108 aataaccaaa 117  Q
    ||| ||||||    
T  4941920 aatgaccaaa 4941929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 33627079 - 33627175
Alignment:
Q  14 gaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    |||||| |||||||||||||| ||||   ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  33627079 gaattgatttatgtttggatacactttactaaaagtgattcttatgagttaatgttgtttggatagtttgaatcaaaatcgattttgaatgtaaaat 33627175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 36114093 - 36114173
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  36114093 ttatgtttggatacactcgtttaaaagtgattcttatgagttgatattgtttggataatttgaatcaaaattgattttgaa 36114173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 27649801 - 27649722
Alignment:
Q  23 tatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| |||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27649801 tatgtttagatacactcatttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 27649722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 43550956 - 43550865
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||||||||| || || |||||||||||||||||| |||||||||||||||||||||||||    
T  43550956 tgaattgatttatgtttggatacactttattaaaagtgattcttgtgggttgatgttgtttggataatttgaatcaaaattgattttgaatg 43550865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 3467598 - 3467512
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| |||||||||||| || ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  3467598 tgaattgatttctgtttggatatatttatttaaaagtgattcttatgaattgatgttggttggatagtttgaatcaaaattgatttt 3467512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 116
Target Start/End: Complemental strand, 8125027 - 8124933
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaa 116  Q
    ||||||||||||| |||  ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  8125027 ttatgtttggatacactcatttaaaagtgattcttaggagttgaagttgtttggatagtttgaatcaaaattgattttaaatggataatgaccaa 8124933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 6399152 - 6399243
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||| |||| |||   |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6399152 tgaattgatttatgtttcgatacactcacttaaaagtgattcttatgagttgatgttgtttggataattttaatcaaaattgattttgaatg 6399243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 41981203 - 41981136
Alignment:
Q  32 atatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  41981203 atatacttatctaaaagtgattcttatgagttgatgttgtttggatactttgaatcaaaattgatttt 41981136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 42143403 - 42143486
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaa 91  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  42143403 tgaggtgaattgatttatgtttggataaacttatttaaaagtgattcttatgagttgacgttgtttggataatttgaaacaaaa 42143486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 34342896 - 34342985
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||| ||| |||||||||| | || ||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  34342896 atgaattgatttttgtttggataaatttatttaaaagtgattcttat-agtggatgttgtttggataatttgaatcaaaattgattttgaa 34342985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 38152220 - 38152307
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| |||||||||||| ||| ||  |||||| ||||| |||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  38152220 aattgatttatgtttggaaatatttacttaaaaatgattcttatgagttgatgtggtttggatactttaaatcaaaattgattttgaa 38152307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 22936837 - 22936927
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| |||||||||||||| ||||  ||| |||||||| || ||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  22936837 tgaattgatttatgtttggatacactttattagaagtgattcttgtggattgatgttgtttggatagtttgaatcaaatttggttttgaat 22936927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 24897640 - 24897710
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaat 92  Q
    ||||||||||||| | || ||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  24897640 ttatgtttggatacatttatttaaaattgattcttatgagttgatgttgtttggataatttgaatcaaaat 24897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 440233 - 440324
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| | |   |||||| ||||| ||||||||| | ||||||||||||| ||||||||||| ||||||||||||    
T  440233 tgaattgatttatgtttggatacattcagttaaaaatgattcttatgagttaacgttgtttggatagattgaatcaaaactgattttgaatg 440324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 40742189 - 40742098
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   ||||| ||||| |||||||||||| ||||||||||  ||||||| ||| |||||||||||||    
T  40742189 tgaattgatttatgtttggatacactttaataaaattgattcttatgagttgatattgtttggatgatttgaatgaaacttgattttgaatg 40742098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 26243190 - 26243129
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgttt 73  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||||| || |||||    
T  26243190 atgaattgatttatgtttggatataattgtttaaaagtgattcttatgagttggtgatgttt 26243129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 11126578 - 11126494
Alignment:
Q  16 attggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    |||| |||||||||||||| |||| |  | |||||||| | |||||||  |||||||||||||||||||||||||||||| ||||    
T  11126578 attgatttatgtttggatacacttataaataagtgattttcatgagtttgtgttgtttggatagtttgaatcaaaattgagtttg 11126494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 26125634 - 26125546
Alignment:
Q  16 attggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||| |||||||||||||| |||  | ||||| ||||| ||||||||||||  ||||||||  |||| |||||||||||||||||||||    
T  26125634 attgatttatgtttggatacactaatgtaaaaatgattcttatgagttgataatgtttggacggtttaaatcaaaattgattttgaatg 26125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 40742339 - 40742428
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| |||  | |  |||||||| ||||||||||||| |||||||||| ||| |||||||||||||||| ||||    
T  40742339 tgaattgatttatgtttggatacactaatgt--aagtgattcttatgagttgatgatgtttggatattttaaatcaaaattgattttaaatg 40742428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 26243103 - 26243065
Alignment:
Q  66 tgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26243103 tgttgtttggatagtttgaatcaaaattgattttgaatg 26243065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 16915096 - 16915035
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||| ||||||||| ||| ||||||| | ||||| ||||||||||||||||||||    
T  16915096 taaaagtgattcttatgagttaatgatgtttggttggtttgtatcaaaattgattttgaatg 16915035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 45147322 - 45147383
Alignment:
Q  41 tttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| |||| ||||||| ||||||| |||  ||||||||||||||||||||||    
T  45147322 tttaaaagtgattcttataagttgatattgtttgaataacttgaatcaaaattgattttgaa 45147383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 3619164 - 3619216
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||| ||||||    
T  3619164 atgttgtttggatagtttgaatcaaaattgattttaaatgtataattaccaaa 3619216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 37458403 - 37458438
Alignment:
Q  69 tgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  37458403 tgtttggatagtttgaatcaaaattgattttgaatg 37458438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 24297687 - 24297721
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||||||||||||||||||||||||||    
T  24297687 atgttgtttggatagtttgaatcaaaattgatttt 24297721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 15206761 - 15206657
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| | |   ||| |||||||| |||  | || |||||||||||||||||||   |||||||||||||||||| | ||| |    
T  15206761 tgaattgatttatgtttggatacattgacttagaagtgattcttaaaaattcatgttgtttggatagtttggcccaaaattgattttgaatgcataatta 15206662  T
Q  113 ccaaa 117  Q
    |||||    
T  15206661 ccaaa 15206657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 38114501 - 38114421
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| ||| | ||  |||||||| ||||||||||| |||||||| ||| || |||  |||||||||||||||    
T  38114501 ttatgtttggatacactcggtttcaagtgattcttatgagttgaggttgtttgaatatttcgaacaaaaattgattttgaa 38114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 100
Target Start/End: Original strand, 41891915 - 41891950
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttg 100  Q
    |||||||||||| |||||||||||||||||||||||    
T  41891915 atgttgtttggacagtttgaatcaaaattgattttg 41891950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 35615721 - 35615683
Alignment:
Q  66 tgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  35615721 tgttgtttggatagtttggctcaaaattgattttgaatg 35615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 31246390 - 31246463
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||| |||| | || ||||||||||||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  31246390 aaaagtgattcttataaattcatgttgtttggataacttggatcaaaattgattttaaatgcataattaccaaa 31246463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 26575849 - 26575809
Alignment:
Q  64 gatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  26575849 gatgttgtttggatagttttgatcaaaattgcttttgaatg 26575809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 30081744 - 30081780
Alignment:
Q  63 tgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||||||||||||  ||||||||||||||    
T  30081744 tgatgttgtttggatagtttgtttcaaaattgatttt 30081780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 41740629 - 41740829
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  41740629 tgagatgaattggtttatgtttgaatacacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttaaatcaaaattgattttgaatgtaa 41740728  T
Q  108 aataaccaaacacctctaaacatagaatttcttatattttgtcnnnnnnntataacaattatatcacatttgccaaagctgtattttttaa-gtgtagtg 206  Q
    ||| |||||||||| ||||||||||||||||||||||||||||       || || |||||||||||||||| |||||||||||||||||| ||||||||    
T  41740729 aatgaccaaacacccctaaacatagaatttcttatattttgtcaaaaaaata-aaaaattatatcacatttgtcaaagctgtattttttaacgtgtagtg 41740827  T
Q  207 at 208  Q
    ||    
T  41740828 at 41740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 32454599 - 32454504
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  32454599 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 32454504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 40885282 - 40885191
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtga-ttgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| |||||||||||| | |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40885282 tgaattgatttatgtttggacacacttgtttaaaagtgagtttttatgagttgatattgtttggatagtttgaatcaaaattgattttgaat 40885191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 3667925 - 3667821
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |    
T  3667925 tgaattgatttatgtttggatacactcaattaaaagtgatttttattagttgatattgtttggatagtttgaatcaaaattgattttaaatgtaaaatga 3667826  T
Q  113 ccaaa 117  Q
    |||||    
T  3667825 ccaaa 3667821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 13253132 - 13253212
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13253132 ttatgtttggatacactcatttaaaagtgattcttatgagttgatgttgtttgaatagtttgaatcaaaattgattttgaa 13253212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 22482260 - 22482169
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  22482260 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattttgaatg 22482169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 35760260 - 35760156
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |    
T  35760260 tgaattgatttatgtttggatacactcaattaaaactgatttttattagttgatattgtttggatagtttgaatcaaaattgattttaaatgtaaaatga 35760161  T
Q  113 ccaaa 117  Q
    |||||    
T  35760160 ccaaa 35760156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 2430346 - 2430425
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||||||||| ||||   || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2430346 ttatgtttggatacacttcaatagaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 2430425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 39988003 - 39988088
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    |||| ||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||  ||| ||||||||||    
T  39988003 tgaggtgaattgatttatgtttggatacacttatttaaaagtgattcttatgagttgatgttgtttggatgatttaaatcaaaatt 39988088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 40495401 - 40495489
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||| |||| ||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||| |||||    
T  40495401 aattgatttatgtttggatacacttttttaaaagtgatttttatgagttgat-ttgtttgaatagtttaaatcaaaattgatttggaatg 40495489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 3060264 - 3060354
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||  ||||||||||||||||||   ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3060264 atgaattaatttatgtttggatatactcacttaaa-gtgattcttatgagtt-atgttgtttggatagtttgaatcaaaattgattttgaatg 3060354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 7385968 - 7386059
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||| ||||||| |||||||||  ||| |||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  7385968 tgaggtgaattgatttatgtttaaatacacttatttaaaagtgattcttatgagttgatgttgtttggataatttaaatcaaaattgctttt 7386059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 41834963 - 41834872
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   || |||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  41834963 tgaattgatttatgtttggatacactttactagaagtgattcttacgaattgatgttgtttggatagtttgaatgaaaattgattttgaatg 41834872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 10058146 - 10058056
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||| |||||||||||||| ||||   || |||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||    
T  10058146 atgaattgatttatgtttggatacactttactagaagtgattcttacgaattgatgttgtttggatagtttgaatgaaaattgattttgaa 10058056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 32030785 - 32030698
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| ||| ||||| ||||||||| || |||||||||| |||||  ||||||||||||| |||||||||||||||||||||||||||    
T  32030785 tgaattgatttttgttttgatatacttattcaaaagtgattcttatg--ttgatgttgtttgaatagtttgaatcaaaattgattttgaa 32030698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8049094 - 8049178
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||| |||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||  ||| ||||||||||| ||||    
T  8049094 aattgatttatgtttggatacacttatttaaaagtgattcttatgagttgttgttgtttggatgatttaaatcaaaattgctttt 8049178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 33953951 - 33954033
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||   || |||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33953951 ttatgtttggatacactttaatagaagtgattctgatgagttgatgttgttcggatagtttgaatcaaaattaattttgaatg 33954033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 9275527 - 9275616
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||| ||||   ||||| ||||| |||||||||||||||||||||||  ||||||| ||| |||||||||||||    
T  9275527 aattgatttatgtttggatacactttaataaaattgattcttatgagttgatgttgtttggatgatttgaatgaaacttgattttgaatg 9275616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 27021199 - 27021108
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggat-agtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| ||||||   |||||||||||| |||  |||||||||||||||||| || ||||||||||||||||||||||||    
T  27021199 tgaattgatttatgtttgg-tatactcacttaaaagtgattcttagaagttgatgttgtttggataagattgaatcaaaattgattttgaatg 27021108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 28869547 - 28869615
Alignment:
Q  16 attggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttga 84  Q
    |||| |||||||||| ||| ||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  28869547 attgatttatgtttgaatacacttacttaaaagtgattcttatgagttgatgttgtttggatagtttga 28869615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 4292220 - 4292129
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||| |||||||| || |  |||||| ||||||||||| |||||||||||||| ||||||||||    
T  4292220 tgaattgatttatgtttggatacacttaattagaagtgattcttgttggttgatattgtttggataatttgaatcaaaattaattttgaatg 4292129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 16158514 - 16158597
Alignment:
Q  21 tttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||  |||| ||||||||||||| ||| || |||||||| |||||||  |||||||||||||||||||||||||    
T  16158514 tttatatttggatgcacttttttaaaagtgattcttaggaattgatgttctttggatgatttgaatcaaaattgattttgaatg 16158597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 40791119 - 40791201
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||  |||  |||||||||||| || ||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  40791119 ttatgtttggatacgcttaattaaaagtgattcttttgagttgatattgtttggatacattgaatcaaaattgattgtgaatg 40791201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 42146370 - 42146288
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||  |||  |||||||||||| || ||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  42146370 ttatgtttggatacgcttaattaaaagtgattcttttgagttgatattgtttggatacattgaatcaaaattgattgtgaatg 42146288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 5710427 - 5710511
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattt 98  Q
    ||||||| ||||||||||||||  ||| || | |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||    
T  5710427 tgaattgctttatgtttggatacgcttatt-acaagtgatttttatgagtagatattgtttggatagtttgaataaaaattgattt 5710511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 7714975 - 7714922
Alignment:
Q  49 tgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  7714975 tgattcttataagttgatgttgtttggatagtttgaattaaaattgattttgaa 7714922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 24045866 - 24045813
Alignment:
Q  49 tgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| ||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  24045866 tgatttttatgggttgatgttgtttggataatttgaattaaaattgattttgaa 24045813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 16843573 - 16843518
Alignment:
Q  49 tgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| ||| |||||||||||||||||||||||| ||| | |||||||||||||||    
T  16843573 tgatttttacgagttgatgttgtttggatagtttaaatgataattgattttgaatg 16843518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 2694831 - 2694889
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||||||| |||| | |||||| |||||| ||| ||||||||||||||||||||||    
T  2694831 taaaagtgattcttatcaattgatgatgtttgtataatttgaatcaaaattgattttga 2694889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 3747683 - 3747735
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||||||||||| ||||||||||||||||  ||| ||||| ||||||    
T  3747683 atgttgtttggatagttttaatcaaaattgattttacatgtaaaattaccaaa 3747735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 31215467 - 31215511
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaa 109  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||    
T  31215467 atgttgttcggatagtttgaatcaaaattgcttttggatggaaaa 31215511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 7178819 - 7178760
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| ||||| |||| | || ||||||||||| |||||||||||||||||| |||||||    
T  7178819 taaaattgattcttatcaatttatgttgtttgggtagtttgaatcaaaattgcttttgaa 7178760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 40980037 - 40979998
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  40980037 atgttgtttggatagttttgatcaaaattgattttgaatg 40979998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 2861656 - 2861611
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    |||||||||| ||| |||| |||||||||||||||||||| |||||    
T  2861656 atgttgtttgaataatttggatcaaaattgattttgaatgcaaaat 2861611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 41959502 - 41959445
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||||||||| ||||||||| |||||||||  ||||||||||  | |||||||||||    
T  41959502 taaaagtgattcttatgagttaatgttgttttcatagtttgaaatagaattgattttg 41959445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 7071503 - 7071555
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||||||||  |||||||||| ||||||||| | ||| ||||||    
T  7071503 atgttgtttggatagttttgatcaaaattgtttttgaatgtataattaccaaa 7071555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 33082423 - 33082463
Alignment:
Q  64 gatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  33082423 gatgttgtttggatagttttgatcaaaattgcttttgaatg 33082463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 34107016 - 34107068
Alignment:
Q  41 tttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    ||||||||| ||| |||||| || |||||||||| |||| |||||||||||||    
T  34107016 tttaaaagtaattcttatgaattaatgttgtttgaataggttgaatcaaaatt 34107068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 208
Target Start/End: Complemental strand, 23358329 - 23358127
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  23358329 tgagatgaaatagtttatgtttggatacacttgtttaaaagtgattgtgatgagttaatgttgtttggatagtttgaatcaaaattgattttgaatgtaa 23358230  T
Q  108 aataaccaaacacctctaaacatagaatttcttatattttgtc-nnnnnnntataacaattatatcacatttgccaaagctgtattttttaa-gtgtagt 205  Q
    ||| |||||||||| |||||| |||||||| || ||||||  |         | |||||||||||||||||| ||||||||||||||||||| |||||||    
T  23358229 aatgaccaaacacccctaaacgtagaatttgttgtatttttccaacaaaaaaaaaacaattatatcacatttaccaaagctgtattttttaacgtgtagt 23358130  T
Q  206 gat 208  Q
    |||    
T  23358129 gat 23358127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 7472724 - 7472819
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7472724 ttatgtttggatacacttatttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgtaaaatgaccaaa 7472819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 44619104 - 44619211
Alignment:
Q  14 gaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataac 113  Q
    |||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||    
T  44619104 gaattgatttatgtttggatacacttgtttaaaaatgattattatgagttgatgttgtttggatagtttgaattaaaatcgattttgaatgtaaaatgac 44619203  T
Q  114 caaacacc 121  Q
    ||||||||    
T  44619204 caaacacc 44619211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 9988543 - 9988634
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9988543 tgaattgatttatgtttggatacacttatttaaaagtgattcatatgagttgatgttgtttggatagtttgaatgaaaattgattttgaatg 9988634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 28127329 - 28127437
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |    
T  28127329 tgaattgatttatgtttggatacactcaattaaaagtgatttttattagttgatattgtttggatagtttgaatcaaaattgattttaaatgtaaaatga 28127428  T
Q  113 ccaaacacc 121  Q
    |||||||||    
T  28127429 ccaaacacc 28127437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 2213572 - 2213468
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |    
T  2213572 tgaattgatttatgtttggatacactcaattaaaagtgatttttattagttgatattgtttggatagtttgaatcaaaattgattttaaatgtaaaatga 2213473  T
Q  113 ccaaa 117  Q
    |||||    
T  2213472 ccaaa 2213468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 39141520 - 39141600
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| |||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39141520 ttatgtttggatacactcatttaaaaatgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 39141600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 5916292 - 5916374
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||  ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5916292 ttatgtttggatacactttattaaaagtgattcatgtgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 5916374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 36312334 - 36312252
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||  ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  36312334 ttatgtttggatacactttattaaaagtgattcatgtgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 36312252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 2215323 - 2215212
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    |||| ||||||| |||||||||||||| |||||||||||| | ||| ||  |||||||||||||||||||| ||| ||| | ||||||||||||||| ||    
T  2215323 tgaggtgaattgatttatgtttggatacacttgtttaaaaataattttt--gagttgatgttgtttggataatttaaattagaattgattttgaatgtaa 2215226  T
Q  108 aataaccaaacacc 121  Q
    ||| ||||||||||    
T  2215225 aatgaccaaacacc 2215212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 14821220 - 14821138
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||   || |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14821220 ttatgtttggatacactttactagaagtgattcttatgagttgatgttgtttggatattttgaatcaaaattgattttgaatg 14821138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 1945081 - 1945166
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattt 98  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||    
T  1945081 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattt 1945166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 42516026 - 42516121
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||| |||||||  || |||| ||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  42516026 ttatgtttgaatatactcattaaaaaatgattctttcgagttgatgttgtttggatagtttgaattaaaattgattttgaatgtataataaccaaa 42516121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 25940283 - 25940373
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| ||||| |||| ||| ||| || || |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  25940283 tgaattgatttatatttgaatacactcgtatagaagtgattattatgagatgatgttgtttggacagtttgaatcaaaattgattttgaat 25940373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 8170344 - 8170288
Alignment:
Q  48 gtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8170344 gtgattcttatgagttgatgttgtttggatagtttgaattaaaattgattttgaatg 8170288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 31562753 - 31562817
Alignment:
Q  40 gtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  31562753 gtttaaaagtgattcttatgagtttatattgtttggataatttgaatcaaaattgattttgaatg 31562817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 7296221 - 7296131
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| |||||||||||||| |||  | ||||||||||| | |||| |||||||| |||||||||||| | ||||||||||||||||||    
T  7296221 tgaattgatttatgtttggatacactcatataaaagtgattatcatgacttgatgttatttggatagtttaagtcaaaattgattttgaat 7296131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 27911472 - 27911386
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||||||||||||||||||  ||||||||||||| ||   |||||||||| |||||||| ||| ||| ||||||||||||    
T  27911472 tgaattgatttatgtttggatatactcatttaaaagtgattatttcaagttgatgttatttggatactttaaattaaaattgatttt 27911386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 28261327 - 28261269
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||    
T  28261327 aagtgattcttatgagttgatgttgtttgaatagtttgaatcaaaattaattttaaatg 28261269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 2234962 - 2234902
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  2234962 taaaagtgattcttatgagtt-atgttgtttggatagtttgaatcaaaattaattttaaatg 2234902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 7295392 - 7295478
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||| |||||||||||||| || | |  |||||||||| | |||||||||||||||||||||||||| | ||||| ||||||||||||    
T  7295392 aattgatttatgtttggatacacatat--aaaagtgattatcatgagttgatgttgtttggatagtttaagtcaaacttgattttgaat 7295478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26207971 - 26208076
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| ||||||||| |||| ||||  |||||| ||||| |||  ||||||||||||||||||  | |||||||||||||||||| |||| | ||| |    
T  26207971 tgaattgatttatgttttgatacacttaattaaaattgattcttacaagttgatgttgtttggattatatgaatcaaaattgattttaaatgtacaatga 26208070  T
Q  113 ccaaac 118  Q
    ||||||    
T  26208071 ccaaac 26208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 28641680 - 28641617
Alignment:
Q  41 tttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| |||| |||||||||||||||||||  |||||| |||||||||||| ||||    
T  28641680 tttaaaagtgattattataagttgatgttgtttggatatgttgaattaaaattgattttaaatg 28641617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 32502023 - 32501960
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgg 105  Q
    |||||||| ||| ||| |||||||| |||||||| ||||||||||||||||||||||| |||||    
T  32502023 ttaaaagtaatttttacgagttgatattgtttgggtagtttgaatcaaaattgattttaaatgg 32501960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 3602510 - 3602587
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||||||||||| |    ||||||||||| |||| | || |||||||||||||||||||||| ||||||||||||    
T  3602510 ttatgtttggatatattaaaataaaagtgatttttattaattcatgttgtttggatagtttgaattaaaattgatttt 3602587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 3853964 - 3853875
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||| | |  | ||||| ||||| |||| | |  |||||||||||||||||||||||||||||| |||||||||    
T  3853964 aattgatttatgtttggatacattcatgtaaaattgattcttatcaatctatgttgtttggatagtttgaatcaaaattgcttttgaatg 3853875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 36548265 - 36548177
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| ||||||||||||||  ||   |||||| ||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||    
T  36548265 tgaattgatttatgtttggatactctcacttaaaa-tgatttttatgggttgatgttgtttggataatttaaattaaaattgattttgaa 36548177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 42089570 - 42089652
Alignment:
Q  13 tgaattggtttatgtttggatata----cttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaa 91  Q
    ||||||| |||||||||||||| |    ||| ||||||||||||| ||||||||||||||||||||||||  | |||||||||    
T  42089570 tgaattgatttatgtttggatagatacacttatttaaaagtgattcttatgagttgatgttgtttggataaatcgaatcaaaa 42089652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 16467150 - 16467066
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||| |||||||||||||||  |  | ||||||||||| ||||| |||||||| |||||||||||||  ||||||||| |||||    
T  16467150 aattgatttatgtttggatatgataatgtaaaagtgattcttatgggttgatgtagtttggatagtttagatcaaaattaatttt 16467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 18511118 - 18511064
Alignment:
Q  63 tgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||||||||| ||| ||||||||||||||||||||| | ||| ||||||    
T  18511118 tgatgttgtttggataatttaaatcaaaattgattttgaatgcataattaccaaa 18511064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 43436325 - 43436410
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||| ||||||||| |||  |||  ||||||||| |||  ||||| |||||||||||||||||| ||| || |||||||||||||    
T  43436325 aattgatttatgttttgatgcactcatttaaaagtaattcatatgaattgatgttgtttggatagattggattaaaattgattttg 43436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 31224746 - 31224690
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgtt 69  Q
    ||||||| |||||||||||||||| ||   ||||||||||| |||||||||||||||    
T  31224746 tgaattgatttatgtttggatatattttactaaaagtgattcttatgagttgatgtt 31224690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 2213713 - 2213658
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgt 68  Q
    ||||||| ||| | |||||||| |||| ||||||||||||| ||||||||||||||    
T  2213713 tgaattgatttgtctttggatacacttatttaaaagtgattcttatgagttgatgt 2213658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 25747953 - 25748012
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| ||||| |||| | || ||||||||||| |||||||||||||||||| |||||||    
T  25747953 taaaattgattcttatcaatttatgttgtttgggtagtttgaatcaaaattgcttttgaa 25748012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 37640236 - 37640273
Alignment:
Q  67 gttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  37640236 gttgtttggatagtttttatcaaaattgattttgaatg 37640273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 291757 - 291938
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaa 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||            ||||||||||||||||||||||| ||    
T  291757 tgagatgaattggtttatgtttggatacacttgtttaaaagtgattgttatgagttgttgtt------------tgaatcaaaattgattttgaatgtaa 291844  T
Q  108 aataaccaaacacctctaaacatagaatttcttatattttgtc---nnnnnnntataacaattatatcacatttgccaaagctgtattttttaa 198  Q
    ||| |||||||||| ||||||||||||||||||||||||| ||           | ||||||||||||||||||||||||||||||||||||||    
T  291845 aatgaccaaacacccctaaacatagaatttcttatattttatcaaaaaaaaaaaaaaacaattatatcacatttgccaaagctgtattttttaa 291938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 43728931 - 43729012
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43728931 ttatgtttggataaacttatttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 43729012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 12247492 - 12247412
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  12247492 ttatgtttggatacacttgtttaaaagtgatttttatgagttgatgttgtttggagaatttgaatcaaaattgattttgaa 12247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 12468291 - 12468190
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataacc 114  Q
    ||||| ||||| |||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||    
T  12468291 aattgatttatatttggatacacttttttaaaagtgatttttatgagttgat-ttgtttggatagtttgaatcaaaattgattttgaatgtacaatgacc 12468193  T
Q  115 aaa 117  Q
    |||    
T  12468192 aaa 12468190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 35536152 - 35536064
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||||| |||||| |||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  35536152 tgaattggtt-atgtttagatacactcgtttaaaagtgattcttatgagttgatgttgtttggataatttgaatcaaaattgattttgaa 35536064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 31223455 - 31223364
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31223455 tgaattgatttatgtttggatacactttaatagaagtgattcttatgagttgatgttgtttggatagtttgaattaaaattgattttgaatg 31223364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 35569247 - 35569338
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  35569247 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattttgaatg 35569338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 42850264 - 42850355
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||||||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  42850264 tgaattgatttatgtttggatacacttccttaaaagtgattcttatgagttgatgttgtttggatattttacatcaaaattgattttgaatg 42850355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 36205273 - 36205181
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| || ||||||| |||| ||||||||||||| ||| ||||  |||||| |||||||||||||||||||||||||||||||||    
T  36205273 atgaattggtttttgattggataaacttatttaaaagtgattcttacgagtgaatgttgcttggatagtttgaatcaaaattgattttgaatg 36205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 6166182 - 6166099
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgg 105  Q
    ||||||||||||| |||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  6166182 ttatgtttggatacactcatttaaaagtgattcttaggagttgatgttgtttgggtagtttgaatcaaaattgattttaaatgg 6166099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 20800322 - 20800413
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||| ||||||||||||||    
T  20800322 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaatattgattttgaatg 20800413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 6464656 - 6464598
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6464656 aagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 6464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 40229510 - 40229604
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||| ||||||| |||||||||||||| ||||  ||| | |||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  40229510 tgaggtgaattgatttatgtttggatacactttcttacaggtgattcttctgagttgatgttgtttggataatttgaatcaaaattgattttgaa 40229604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 45710097 - 45710039
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45710097 aagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 45710039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 48510989 - 48510903
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| |||||||||||||| ||||| |||||||||||| |||||| ||||||||||||| ||||| || |||||||||||||||    
T  48510989 tgaattgatttatgtttggatacacttgcttaaaagtgattcttatgaattgatgttgtttgaatagtatgtatcaaaattgatttt 48510903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 1199908 - 1199819
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| |||||||||||||| ||||  ||| |||||||| || ||  |||||||||||||||||||||||||||||||||||||||||    
T  1199908 tgaattgatttatgtttggatacactttattagaagtgattcttgtggattgatgttgtttggatagtttgaatcaaaattgattttgaa 1199819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 4369847 - 4369938
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| ||  ||   |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  4369847 tgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgagttgatgttgtttggataggttgaatcaaaattgattttaaatg 4369938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 13056078 - 13055988
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||| |||  ||| || |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  13056078 tgaattgatttatgtttgaatacgcttatt-aaaagtgatttttatgagttgatattgtttggatagtttgaataaaaattgattttgaatg 13055988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 10470638 - 10470580
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10470638 aagtgattcttatgagttgatgttgtttggatagtttgaattaaaattgattttgaatg 10470580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 5410692 - 5410631
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  5410692 ttaaaagtgattcttatgacttgatgttgtttggatagtttgaatcataattgattttgaat 5410631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 13931695 - 13931614
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||||||||||||   |||||  ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  13931695 ttatgtttggatatactcacttaaacatgattcttacaagttgatgttgtttggatagtttgaatcaaaattgattttgaat 13931614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 7826399 - 7826490
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| ||  ||   |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  7826399 tgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgaattgatgttgtttggataggttgaatcaaaattgattttaaatg 7826490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 25230079 - 25230000
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||||||||| ||||   || |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  25230079 ttatgtttggatacactttaatagaagtgattcttattagttgatgttgtttggatagtttgaatgaaaattgattttga 25230000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 50977385 - 50977475
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||||||  ||| || | |||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  50977385 tgaattgttttatgtttggatacgcttatt-acaagtgatttttatgagtagatattgtttggatagtttgaataaaaattgattttgaatg 50977475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 9447605 - 9447533
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattg 94  Q
    |||||||| ||||||||  ||||||||||||| ||  |||||||||||||||||||||||||||| |||||||    
T  9447605 ttatgtttagatatactcatttaaaagtgattctttcgagttgatgttgtttggatagtttgaattaaaattg 9447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 15884276 - 15884203
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||| |||| | || ||||||||||||||||||| |||||||||||||||||||| | ||| ||||||    
T  15884276 aaaagtgatttttataaattcatgttgtttggatagtttggatcaaaattgattttgaatgcataattaccaaa 15884203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 11023403 - 11023466
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgg 105  Q
    |||||||| ||| ||| |||||||| |||||||| ||||||||||||||||||||||| |||||    
T  11023403 ttaaaagtaatttttacgagttgatattgtttgggtagtttgaatcaaaattgattttaaatgg 11023466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 31933772 - 31933717
Alignment:
Q  49 tgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  31933772 tgattcttatgagttgatgttgtttggatattttacatcaaaattgattttgaatg 31933717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 47123467 - 47123381
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| |||||||||| ||||  |||||||||||| |||| ||||| |||||||||||||  || ||||||||||| ||||    
T  47123467 tgaattgatttttgtttggatacacttcgttaaaagtgattcttataagttggtgttgtttggatacattaaatcaaaattgctttt 47123381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 26058320 - 26058235
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||| |||||||||||||  |||  ||||||||| |||  ||||| |||||||||||||||||| ||| || |||||||||||||    
T  26058320 aattgatttatgtttggatgcactcatttaaaagtaattcatatgaattgatgttgtttggatagattggattaaaattgattttg 26058235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 25061277 - 25061221
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||||||| |||| | |||||| |||||||||| ||||||||||||||||||||    
T  25061277 taaaagtgattcttatcaattgatgatgtttggataatttgaatcaaaattgatttt 25061221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 50406211 - 50406107
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| ||| |||||||||  ||||  |||||| ||||| |||| ||||| |||||||||||||  |||||||||||||| |||| |||| | ||| |    
T  50406211 tgaattgatttttgtttggatgcacttcgttaaaaatgattcttataagttgttgttgtttggatacattgaatcaaaattgtttttaaatgtataatta 50406112  T
Q  113 ccaaa 117  Q
    |||||    
T  50406111 ccaaa 50406107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 11051407 - 11051446
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  11051407 atgttgtttggatagtttgaataaaaattgattttgaatg 11051446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 40821873 - 40821815
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| ||||  ||||||||| |||||||| |||||||||||||||| ||||||||    
T  40821873 aagtgattcttatttgttgatgttatttggataatttgaatcaaaattgagtttgaatg 40821815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 11561903 - 11561826
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaa 90  Q
    ||||||| ||||| |||| |||||||  ||||||||||||| ||||||||| || |  |||||||||||||| |||||    
T  11561903 tgaattgatttatatttgaatatactattttaaaagtgattcttatgagttcatttaatttggatagtttgactcaaa 11561826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Original strand, 46033210 - 46033249
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  46033210 atgttgtttggatagtttttatcaaaattgattttgaatg 46033249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 34718530 - 34718452
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    ||||| |||||||||| ||| ||||||  |||||||||| |||||| ||   |||||||||||| ||||||| ||||||    
T  34718530 aattgatttatgtttgaatacacttgtacaaaagtgattcttatgaattatagttgtttggatactttgaattaaaatt 34718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 33226233 - 33226274
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatgga 106  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  33226233 atgttgtctagatagtttgaatcaaaattgcttttgaatgga 33226274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 27801699 - 27801763
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatag 79  Q
    ||||| |||||||||||||  |||  ||||||||| |||  ||||| ||||||||||||||||||    
T  27801699 aattgatttatgtttggatgcactcatttaaaagtaattcatatgaattgatgttgtttggatag 27801763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 49243099 - 49243147
Alignment:
Q  62 ttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    |||||||||||| |||||||||||||| |||| ||||| |||| |||||    
T  49243099 ttgatgttgtttagatagtttgaatcagaattaatttttaatgcaaaat 49243147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 9456174 - 9456079
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  9456174 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatcttgtttggatagtttgaatcaaaattgattttgaatgtaaaatgaccaaa 9456079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 48134649 - 48134567
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48134649 ttatgtttggataaacttgtttaaaagtgatttttataagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 48134567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 43737969 - 43738074
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaata 111  Q
    |||||||| ||| |||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||||     
T  43737969 atgaattgatttttgtttggataaacttatttaaaagtgattcttatgagtggatgttgtttggatagtttgaatcaaaattgattttgaatgtgaaatg 43738068  T
Q  112 accaaa 117  Q
    ||||||    
T  43738069 accaaa 43738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 37562648 - 37562561
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||||| |||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||    
T  37562648 tgaattgatttatgtttggatacacttatttaaaagtgattcatatgagttgatgttgtttggatagtttgaatgaaaattgattttg 37562561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 3342869 - 3342778
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||| |||||||||||||| ||||   || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3342869 atgaattgatttatgtttggatacactttaatagaagtgattcttatgagttgatgttgtttgaatagtttgaatcaaaattgattttgaat 3342778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 39391163 - 39391257
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||| ||||||| |||||||||||||| ||||  ||| |||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  39391163 tgaggtgaattgatttatgtttggatacactttcttacaagtgattcttatgaattgatgttgtttgaatagtttgaatcaaaattgattttgaa 39391257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 34366013 - 34366101
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| ||||||||||||||  ||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  34366013 tgaattgatttatgtttggatacgcttatt-aaaagtgatttttatgagttgatgttgtttggatagtttgaataaaaattgattttgaa 34366101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 3622491 - 3622582
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||| ||||    
T  3622491 tgaattgatttatgtttggatacacttacttaaaagtgattcttacgagttgatgttgtttggatagtataaatcaaaattgattttaaatg 3622582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 12632114 - 12632205
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||  | |||| | |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  12632114 tgaattgatttatgtttgagtgtactcgcttaaaagtgattcttatgagttgatgttgtttgaattgtttgaatcaaaattgattttgaatg 12632205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 19096013 - 19095926
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||||| ||||||||||| ||| |||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  19096013 tgaattggtt-atgtttggatacactcgtttaaaaatgattcttatgagtt-atgttgtttggataatttgaatcaaaattgattttgaa 19095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 47217572 - 47217661
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| |||||||||||||  ||| | |||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||    
T  47217572 tgaattgatttatgtttggatgcactcgcttaaaagtgattttgatgggttgatgttgtttggatagtttgaattaaaattgattttgaa 47217661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 34010409 - 34010329
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||| ||| |||  |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34010409 ttatgtttgaatacactcatttaaaagtggttcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaa 34010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 44967430 - 44967518
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||| |||||||||| ||| ||||   || |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  44967430 tgaattgatttatgtttgaatacactttaatagaagtgattcttatgagttgatgttgtttggataatttgaatcaaaattgattttga 44967518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 37639508 - 37639417
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||| | ||||  |||||||||||| || || ||||||||||||||||||||||||||||||||| ||||| ||||    
T  37639508 tgaattgatttatgtttggagaaactttattaaaagtgattcttgtgggttgatgttgtttggatagtttgaatcaaaattaattttaaatg 37639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 38230146 - 38230055
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| | ||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||| ||||    
T  38230146 tgaattgatttatgtttggatacattttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattttaaatg 38230055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 47301622 - 47301685
Alignment:
Q  47 agtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47301622 agtgattcttatgggttgatgttgtttggatagtttgaatcaaaattgattttgaatgtaaaat 47301685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 42740468 - 42740384
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||| ||||||||| |||||||||  |||||||||||| ||||| |||||| ||||||||||||| || |||||||||||||||    
T  42740468 aattgatttatgtttagatatacttacttaaaagtgattcttatgtgttgatattgtttggatagtatgtatcaaaattgatttt 42740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 3375568 - 3375477
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||| |||||||||| |||   |||||||||||| |||||||| ||||||||||||||  |||| ||||||||||||||||||||    
T  3375568 tgaattgatttgtgtttggatacactcacttaaaagtgattcttatgagtcgatgttgtttggatgatttggatcaaaattgattttgaatg 3375477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 10371989 - 10372080
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| || | ||  ||| |||||||| || || |||||||||||| |||||||||||||||||||||||||||||||    
T  10371989 tgaattgatttatgtttggttacagtttattagaagtgattcttgtgggttgatgttgttcggatagtttgaatcaaaattgattttgaatg 10372080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 32206003 - 32205914
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||| ||||    
T  32206003 tgaattgatttatgtttggatacacttacttaaaagtgattcttatgagtt-atgttgttt-gatagtatgaatcaaaattgattttaaatg 32205914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 386512 - 386597
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||||||||||||||||||     |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  386512 tgaattgatttatgtttggatatactaaccgaaaagtgattcttatga-ttgatgttgtttggatagattgaatcaaaattgatttt 386597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 43631735 - 43631817
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||| |||  |||||||||||| || ||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  43631735 ttatgtttggatatgcttaattaaaagtgattcttttgagttgatattgtttggatatattgaatcaaaattgattgtgaatg 43631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 48459788 - 48459702
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| |||||||||||||| ||||  |||||||||||| |||||| | ||||||||||||||||| || || ||||||||||||    
T  48459788 tgaattgatttatgtttggatacacttacttaaaagtgattcttatgaatggatgttgtttggatagtatgtattaaaattgatttt 48459702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 47021997 - 47021906
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   || | |||||| ||| || ||||||||||||||||| ||||||| |||||||||||||||||    
T  47021997 tgaattgatttatgtttggatacactttactagatgtgattcttacgaattgatgttgtttggataatttgaatgaaaattgattttgaatg 47021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 40903200 - 40903302
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataacc 114  Q
    |||||||||||||||||||||| |    ||||||||||| |||| | || |||||||||||||||||  ||||||||||||||||| ||| | ||| |||    
T  40903200 aattggtttatgtttggatatattaaagtaaaagtgatttttatcaattcatgttgtttggatagttcaaatcaaaattgattttggatgtataattacc 40903299  T
Q  115 aaa 117  Q
    |||    
T  40903300 aaa 40903302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 3750764 - 3750678
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| |||||||||||||| ||||   || || ||| | |||||| ||||||||||||||||||||| |||||||||| |||||    
T  3750764 tgaattgatttatgtttggatacactttaatataattgaatcttatgaattgatgttgtttggatagtttaaatcaaaattaatttt 3750678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 32187016 - 32186931
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||| |||||||||||||  |||  ||||||||| |||  ||||| |||||||||||||||||| ||| || |||||||||||||    
T  32187016 aattgatttatgtttggatgcactcatttaaaagtaattcatatgaattgatgttgtttggatagattggattaaaattgattttg 32186931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 34011021 - 34011082
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgttt-ggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||||||| ||||||||||||||||||| || || ||| |||||||||||||||||||    
T  34011021 ttaaaagtgattcttatgagttgatgttgtttggggtactttaaatcaaaattgattttgaa 34011082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 41715733 - 41715648
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||| |||||||||||||  |||  ||||||||| |||  ||||| |||||||||||||||||| ||| || |||||||||||||    
T  41715733 aattgatttatgtttggatgcactcatttaaaagtaattcatatgaattgatgttgtttggatagattggattaaaattgattttg 41715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 42904631 - 42904551
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    ||||||| ||||||||| |||| ||| |||||||||||||| |||||| || || ||||||| ||| ||| ||||||||||    
T  42904631 tgaattgatttatgttttgatacactcgtttaaaagtgattcttatgaattaattttgtttgtatattttaaatcaaaatt 42904551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 37008384 - 37008447
Alignment:
Q  16 attggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatag 79  Q
    |||| |||||||||||| | ||||  ||| |||||||| |||||||||||||||||||||||||    
T  37008384 attgatttatgtttggagacactttcttataagtgattcttatgagttgatgttgtttggatag 37008447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 37886854 - 37886887
Alignment:
Q  66 tgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||||||||||||||||||||||||||||||    
T  37886854 tgttgtttggatagtttgaatcaaaattgatttt 37886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 4035960 - 4035921
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  4035960 atgttgtttggatagttttaatcaaaattgcttttgaatg 4035921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 36920238 - 36920293
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatt 97  Q
    ||||| |||||| || |||||||||||||||||| ||  |||||||||||||||||    
T  36920238 ttaaaggtgattcttttgagttgatgttgtttgggtacattgaatcaaaattgatt 36920293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 39977631 - 39977544
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||| ||||| |||||||| |||  | ||||||| ||| ||   ||||||||||||||||||| ||| ||| ||||||||||||    
T  39977631 atgaattgatttatttttggataaactcatataaaagttattatttcaagttgatgttgtttggatactttaaattaaaattgatttt 39977544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 43581682 - 43581627
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||| | || | ||||||||||||||||||||||||| ||||||| ||||    
T  43581682 aaaagtgattataattaattgatgttgtttggatagtttgaattaaaattgctttt 43581627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 46541647 - 46541593
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||| |||||| ||||| |||||| ||||| |||||||||||||||||||    
T  46541647 aaaagtgattcttatga-ttgatattgttttgatagattgaatcaaaattgatttt 46541593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 1766473 - 1766415
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||||||| |||| | |||||| |||||| ||| ||||||| ||||||||||||||    
T  1766473 taaaagtgattcttatcaattgatgatgtttgaataatttgaattaaaattgattttga 1766415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 12964483 - 12964438
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaa 89  Q
    |||||| ||| ||||||||| |||||||||||||||||||| ||||    
T  12964483 aaaagtaattattatgagttaatgttgtttggatagtttgagtcaa 12964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 39634227 - 39634300
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||| |||| | ||  |||||||||||||  ||| |||||||||||||||||||| | ||| ||||||    
T  39634227 aaaagtgattcttataaattcttgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaa 39634300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 13739254 - 13739159
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  13739254 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13739159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 13744754 - 13744659
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  13744754 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 13744659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 29409295 - 29409399
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| | || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |    
T  29409295 tgaattgatttatgtttggatacagttttttaaaaatgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatgtataatga 29409394  T
Q  113 ccaaa 117  Q
    |||||    
T  29409395 ccaaa 29409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 10826148 - 10826062
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  10826148 tgaattgatttttgtttggatatacttatttaaaagtgattcttatgagttgattttgtttggatagtttgaatcaaaattaatttt 10826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 31132512 - 31132432
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||| |||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31132512 ttatttttggatacacttatttaaaagtgattcttatgggttgatgttgtttggatagtttgaatcaaaattgattttgaa 31132432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 16442394 - 16442485
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| |||| |||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  16442394 tgaattgatttatgtttggatacacttatttaaaagtgattcatatgagttgatattgtttggataatttgaatgaaaattgattttgaatg 16442485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 16548196 - 16548105
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  16548196 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattttgaatg 16548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 6208115 - 6208197
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||   ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6208115 ttatgtttggatacactttactaaaagtgattcttatgagttgatgttgtttagatagtttgaatcaaaattaattttgaatg 6208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 33899048 - 33899140
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||| |||  | ||||||||||| ||||||||| ||  ||||||||| |||| |||||||||||||||||||||    
T  33899048 atgaattgatttatgtttggatacactaatgtaaaagtgattcttatgagttaataatgtttggatggtttaaatcaaaattgattttgaatg 33899140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 17830090 - 17830133
Alignment:
Q  61 gttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17830090 gttgatgttgtttggatagtttgaatcaaaattgattttgaatg 17830133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 699613 - 699511
Alignment:
Q  14 gaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataac 113  Q
    |||||| |||||||||||||  ||||   ||||||| ||| |||| |||| |||||||| ||||||||||||||||||| ||||||||||  ||||| ||    
T  699613 gaattgatttatgtttggatgcactttactaaaagtaattcttataagttaatgttgtt-ggatagtttgaatcaaaatcgattttgaatataaaattac 699515  T
Q  114 caaa 117  Q
    ||||    
T  699514 caaa 699511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 21455910 - 21455848
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| | ||||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  21455910 ttaaaagtgattctcatgagttaatgttgtttgcatagtttgaatcaaaattaattttaaatg 21455848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 1312535 - 1312587
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||| ||||||    
T  1312535 atgttgtttggatagtttgacccaaaattgattttgaatgcataattaccaaa 1312587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 7215603 - 7215546
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||| | ||||||| |||||||||| |||  ||||||||||||| |||||    
T  7215603 ttaaaagtgattctcatgagttaatgttgtttgcataaattgaatcaaaattaatttt 7215546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 43781571 - 43781666
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  43781571 ttatgtttggatacacttgtttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatgtaaaatgaccaaa 43781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 51922982 - 51922877
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| ||||   ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |    
T  51922982 tgaattgatttatgtttggatacactttactaaaagtaattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgtataatga 51922883  T
Q  113 ccaaac 118  Q
    ||||||    
T  51922882 ccaaac 51922877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 13183094 - 13183199
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||| ||||||| ||||| |||| |||||||||| |||||||| ||| ||||||||||||||||||||| ||||| |    
T  13183094 tgaattgatttatgtttggatacacttatttaaaaatgatttttataagttgatgttttttggataatttaaatcaaaattgattttgaatgtaaaatga 13183193  T
Q  113 ccaaac 118  Q
    ||||||    
T  13183194 ccaaac 13183199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 29149351 - 29149455
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||| |    
T  29149351 tgaattgatttatgtttggatacactcaattaaaagtgatttttattagttgatattgtttggatagtttgaatcaaaattgattttaaatgtaaaatga 29149450  T
Q  113 ccaaa 117  Q
    |||||    
T  29149451 ccaaa 29149455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 30842165 - 30842077
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||| |||||    
T  30842165 ttatgtttggatacacttgtttgaaagtgattcttatgagttgatttcatttggatagtttgaatcaaaattgattttgaatgtaaaat 30842077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 48407750 - 48407838
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||| |||||    
T  48407750 ttatgtttggatacacttgtttgaaagtgattcttatgagttgatttcatttggatagtttgaatcaaaattgattttgaatgtaaaat 48407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 16566347 - 16566256
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  ||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  16566347 tgaattgatttatgtttggatacactttattaaaagtgattcatgtgggttgatgttgtttggatagtttgaatcaaaattgattttgaatg 16566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 39636827 - 39636736
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  39636827 tgaattgatttatgtttggatacacttacttaaaagtgattcttacgagttgatgttgtttggatagtatgaatcaaaattgattttaaatg 39636736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 48550471 - 48550562
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48550471 tgaattgatttatgtttggataaactttaatagaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttaaatg 48550562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 6138664 - 6138749
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattt 98  Q
    ||||||| |||||||||||||| |||| ||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  6138664 tgaattgatttatgtttggatacacttatttaaaaatgattcatatgagttgatgttgtttggatagtttgaatgaaaattgattt 6138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 42944942 - 42945047
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| ||||||||| |||||||||  |||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||| |||| | ||| |    
T  42944942 tgaattgatttatgtttagatatacttacttaaaagtgattcttatgtgttgatgttgtttggatagtatgtatcaaaattgattttaaatgtataatga 42945041  T
Q  113 ccaaac 118  Q
    ||||||    
T  42945042 ccaaac 42945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 49136564 - 49136460
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||| | ||| |    
T  49136564 tgaattgatttatgtttggatacactcacttaaaagtgattcttatgagttgatgttgtttgaataattttaatcaaaattgattttgaatgtacaatga 49136465  T
Q  113 ccaaa 117  Q
    |||||    
T  49136464 ccaaa 49136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 15603402 - 15603311
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||| ||||| |||||||||| |||||| ||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  15603402 tgaattgatttgtgtttagatatacttgcttaaaaatgattcttatgagttgatgttgtttggataatttaagtcaaaattgattttgaatg 15603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 14072536 - 14072454
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||   || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14072536 ttatgtttggatacactttaatagaagtgattctaatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 14072454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 2175191 - 2175280
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| |||||||||||||  ||| | |||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||    
T  2175191 tgaattgatttatgtttggatgcactcgcttaaaagtgattttgatgggttgatgttgtttggatagtttgaattaaaattgattttgaa 2175280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 26651892 - 26651997
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| ||||||||| |||| ||||   ||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||||| | ||| |    
T  26651892 tgaattgatttatgtttagatacactttactaaaagtaattcttatgagtcgatgttatttggatagtttgaatcaaaattgattttgaatgtataatga 26651991  T
Q  113 ccaaac 118  Q
    ||||||    
T  26651992 ccaaac 26651997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 19592275 - 19592379
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| ||||   ||||||||||| ||| || |||| |||||||||||||||||||| ||||||||||||||||| | ||| |    
T  19592275 tgaattgatttatgtttggatacactttactaaaagtgattcttacgaattgacgttgtttggatagtttgaatgaaaattgattttgaatgtacaatga 19592374  T
Q  113 ccaaa 117  Q
    |||||    
T  19592375 ccaaa 19592379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 14564189 - 14564280
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||| ||||||||||||||   |   |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  14564189 atgaattgatttatgtttggataccttcagttaaaagtgattcttatgagttaatgttgtttggatagattgaatcaaaattgattttgaat 14564280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 28987030 - 28986971
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgg 105  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28987030 aagtgatttttatgagttgatgttgtttggatagtttgaatcaaaattgattttaaatgg 28986971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 32238103 - 32238193
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||| ||||||||||| |||   ||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32238103 tgaattggtt-atgtttggatacactatattagaagtgattcatatgagttgatgttgtttggatagtttgaatcaaaactgattttgaatg 32238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 43772175 - 43772253
Alignment:
Q  21 tttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||| | ||||||||||||||||||    
T  43772175 tttatgtttggatacacttttttagaagtgattcttacgagttgatgttgtttggataatatgaatcaaaattgatttt 43772253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 9889388 - 9889469
Alignment:
Q  23 tatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| |||   || ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  9889388 tatgtttggatacactcacttgaaagtgattcttatgagtagatgttgtttggatagtttgaattaaaattgattttgaatg 9889469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 9893754 - 9893662
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| | |||||||||||| ||    || ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  9893754 atgaattgatatatgtttggatacacccacttgaaagtgattcttatgagttgatgttgtttggatagtttaaattaaaattgattttgaatg 9893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 4954095 - 4954186
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| ||  ||   |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  4954095 tgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgagttgatgttgtttggataggttgaatcaaaattaattttaaatg 4954186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 46830113 - 46830204
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||||| | |  ||||||||||||||| ||||    
T  46830113 tgaattgatttatgtttggatacactttcttaaaattgattcttatgagttgatgttgtttggatattctacatcaaaattgattttaaatg 46830204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 6505243 - 6505153
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| ||||||||| |||| |||  | ||||||||||| | |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  6505243 tgaattgatttatgtttagatacactcatataaaagtgattatcatgacttgatgttgtttggatagtttaagtcaaaattgattttgaat 6505153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 54153054 - 54152996
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  54153054 aagtgattctcatgagttgatgttgtttgaatagtttgaatcaaaattgattttgaatg 54152996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 30887199 - 30887288
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||| ||   | ||||||||||| ||||||||| ||| ||||||||| ||||| ||||||||||||||||||||    
T  30887199 aattgatttatgtttggatacaccaatataaaagtgattcttatgagttaatgatgtttggatggtttgtatcaaaattgattttgaatg 30887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 31520423 - 31520505
Alignment:
Q  21 tttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||| ||||| ||| || |||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||| ||||    
T  31520423 tttatgtttagatatgcttatt-aaaagtgatttttatgagttgatgttttttgggtagtttgaataaaaattgattttaaatg 31520505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 26426167 - 26426249
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||  |||  |||||||||||| || ||||||||| |||||||||||  ||||||||||||||||| ||||||    
T  26426167 ttatgtttggatacgcttaattaaaagtgattcttttgagttgatattgtttggatacattgaatcaaaattgattgtgaatg 26426249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 49519764 - 49519686
Alignment:
Q  21 tttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||||| ||||| |||||| ||||| |||||| ||||| ||||||||||||| || || ||||||||||||    
T  49519764 tttatgtttggatacacttgcttaaaaatgattcttatgaattgatattgtttggatagtatgtattaaaattgatttt 49519686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 38694088 - 38693999
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||| ||||||||||||||| ||| | |||||||||||| ||||| |||||| ||| ||| ||| ||| |||||||||| ||||||||||    
T  38694088 aattagtttatgtttggatacactcgcttaaaagtgattcttatgggttgatcttgcttgaataatttaaatcaaaattaattttgaatg 38693999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 48908315 - 48908228
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    |||||||||| |||||||||||  || | |||||||| |||  ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  48908315 tgaattggtt-atgtttggatac-ctcgcttaaaagtaattcatataagttgatgttgtttggatagcttgaatcaaaattgattttgaa 48908228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 54735696 - 54735785
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||| | |  |  |||||||||||| ||||||||||||||||||||  || ||| ||||||||||||| |||||||    
T  54735696 aattggtttatgtttggaaacatatacttaaaagtgattcttatgagttgatgttgtttgagtattttaaatcaaaattgatcttgaatg 54735785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 56241878 - 56241983
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaata 111  Q
    |||||||| |||||||||||||| | |  | ||||||||||| ||||||||||||  ||||| |||  ||| ||||||||||||||||||||| | |||     
T  56241878 atgaattgatttatgtttggatacattaatgtaaaagtgattcttatgagttgataatgtttagatgatttaaatcaaaattgattttgaatgtataatg 56241977  T
Q  112 accaaa 117  Q
    ||||||    
T  56241978 accaaa 56241983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 55638861 - 55638921
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||| |||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  55638861 taaaagggattcttatgagttgatattgtttggataatatgaatcaaaattgattttgaat 55638921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 14054893 - 14054806
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||||| |||||||||||||| |||| | ||||||||||| ||   ||||||||||||||| ||| ||| ||| |||||||||||||    
T  14054893 tgaattgatttatgtttggataaacttatataaaagtgattatttcaagttgatgttgtttgaatactttaaattaaaattgattttg 14054806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 25312757 - 25312671
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| |||||||||| ||||  ||||||| |||| |||||| ||| |||||||||||||  |||||||||||||| ||||    
T  25312757 tgaattgatttttgtttggatacactttgttaaaagcgattcttatgaattgttgttgtttggatacattgaatcaaaattgctttt 25312671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 13167567 - 13167463
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| ||||| |||||||| ||   ||||||||||||| |||||  || ||| ||||||||||| |||||||||||||| |||| |||| | ||| |    
T  13167567 tgaattgatttatatttggatacacccatttaaaagtgattcttatgtattaatgatgtttggatagattgaatcaaaattgcttttaaatgcataatta 13167468  T
Q  113 ccaaa 117  Q
    |||||    
T  13167467 ccaaa 13167463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 46926090 - 46926010
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    ||||||| |||||||||||||| ||| |||||||||||||| |||||| || || || |||  ||| ||||||||||||||    
T  46926090 tgaattgatttatgtttggatacactcgtttaaaagtgatttttatgaattaattttatttatatattttgaatcaaaatt 46926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 5025519 - 5025484
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||||||||||||||||||||||||||||||||||    
T  5025519 atgttgtttggatagtttgaatcaaaattgattttg 5025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 48257115 - 48257048
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||||||| |||| | || ||||||||||||||  ||| |||||||||||||||||||| |||||    
T  48257115 taaaagtgattcttataaattcatgttgtttggataaattggatcaaaattgattttgaatgcaaaat 48257048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 54150568 - 54150482
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| |||||||||| ||||  |||||| ||||| |||| ||||| |||||||||||||  || ||||||||||| ||||    
T  54150568 tgaattgatttttgtttggatacacttcgttaaaaatgattcttataagttggtgttgtttggatacattaaatcaaaattgctttt 54150482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 38306022 - 38305949
Alignment:
Q  44 aaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataaccaaa 117  Q
    |||||||||| |||| | || ||||||||||||||  ||| |||||||||||||||||||| | ||| ||||||    
T  38306022 aaaagtgattcttataaattcatgttgtttggataacttggatcaaaattgattttgaatgcataattaccaaa 38305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 48550257 - 48550172
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||| |||||||||||||  |||  ||||||||| |||  ||||| ||||| |||||||||||| ||| || |||||||||||||    
T  48550257 aattgatttatgtttggatgcactcatttaaaagtaattcatatgaattgatattgtttggatagattggattaaaattgattttg 48550172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 92
Target Start/End: Complemental strand, 15619610 - 15619579
Alignment:
Q  61 gttgatgttgtttggatagtttgaatcaaaat 92  Q
    ||||||||||||||||||||||||||||||||    
T  15619610 gttgatgttgtttggatagtttgaatcaaaat 15619579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 45106398 - 45106359
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  45106398 atgttgtttggatagtttttatcaaaattgattttgaatg 45106359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 14076028 - 14075966
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| |||||| |||||||||||||  || ||| |||||||||| || |||||||    
T  14076028 ttaaaagtgattcttatgaattgatgttgtttgagtactttaaatcaaaattaatcttgaatg 14075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 50523350 - 50523387
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  50523350 atgttgtttggatagttttgatcaaaattgattttgaa 50523387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 54655262 - 54655205
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    ||||||||||| ||   ||||||||||||||||||| ||| ||| |||||||||||||    
T  54655262 taaaagtgattatttcaagttgatgttgtttggatactttaaattaaaattgattttg 54655205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 104
Target Start/End: Original strand, 33721971 - 33721999
Alignment:
Q  76 atagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||||||||||||    
T  33721971 atagtttgaatcaaaattgattttgaatg 33721999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 39187776 - 39187704
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaa 85  Q
    ||||||| |||||||||||||| ||||   || |||||||| || | ||||||||||||||| ||| ||||||    
T  39187776 tgaattgatttatgtttggatacactttactagaagtgattcttgttagttgatgttgtttgaataatttgaa 39187704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 8506 - 8402
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |    
T  8506 tgaattgatttatgtttggatacacttttttaaaaatgatttttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatgtacaatga 8407  T
Q  113 ccaaa 117  Q
    |||||    
T  8406 ccaaa 8402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 20813203 - 20813112
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20813203 tgaattgatttttgtttggatatacttattcaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 20813112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 10853313 - 10853402
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| ||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10853313 aattgatttatgtttggatatactcacttaaaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 10853402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 42318378 - 42318290
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  42318378 ttatgtttggatacacttgtttgaaagtgattcttatgagttgatttcgtttggatagtttgaatcaaaattgattttgaatgtaaaat 42318290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 53179903 - 53179802
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataacc 114  Q
    ||||| |||||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||| |||    
T  53179903 aattgatttatgtttggatacacttttttaaaagtgatttttatgagttgat-ttgtttggatagtttaaatcaaaattgattttgaatgtacaatgacc 53179805  T
Q  115 aaa 117  Q
    |||    
T  53179804 aaa 53179802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 38125494 - 38125582
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaat 110  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||| |||||    
T  38125494 ttatgtttggatacacttgtttgaaagtgattcttatgagttgatttcgtttggatagtttgaatcaaaattaattttgaatgtaaaat 38125582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 10334196 - 10334105
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||| |||||||||||||| ||||   ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10334196 atgaattgatttatgtttggatacactttactaaaagtaattcttatgagttgacgttgtttggatagtttgaatcaaaattgattttgaat 10334105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 38172351 - 38172442
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||||   || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38172351 tgaattgatttatgtttggatacactttaatagaagtgattcttatgagttgatgttgtttggatagtttgaattaaaattgattttgaatg 38172442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 26519721 - 26519617
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataa 112  Q
    ||||||| |||||||||||||| |||   |||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||| |||| ||||| |    
T  26519721 tgaattgatttatgtttggatacactcaattaaaagtgatttttattagttgatattgtttggatagtttgaaacaaaattgattttaaatgtaaaatga 26519622  T
Q  113 ccaaa 117  Q
    |||||    
T  26519621 ccaaa 26519617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 44224820 - 44224728
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||| |||   |||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  44224820 atgaattgatttatgtttggatacactcacttaaaagtgattcttatgagttgatgttgtttggataattttagtcaaaattgattttgaatg 44224728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 15511420 - 15511510
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||||||  ||| || |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15511420 tgaattgatttatgtttggatacgcttatt-aaaagtgatttttatgagttgatattgtttggatagtttgaataaaaattgattttgaatg 15511510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 31618931 - 31619022
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||||||  ||   ||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31618931 tgaattgatttatgtttggatactctcacttagaagtgattcttatgagttgatgttgtttggatagtttgaatcaaaattaattttgaatg 31619022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 53074951 - 53074869
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| |||   |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  53074951 ttatgtttggatacactcacttaaaagtgattcttatgagtggatgttgtttggatagtttgaatcaaaattgattttaaatg 53074869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 3348298 - 3348209
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||||| ||||  |||||||| ||| |||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  3348298 aattgatttatgtttggatacacttccttaaaagtaattcttatgagttgatgttgtttggatattttatatcaaaattgattttgaatg 3348209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 16246140 - 16246229
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||| |||||||||||| | ||||   || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16246140 aattgatttatgtttggaaacactttaatagaagtgattcttaggagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 16246229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 23207112 - 23207199
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||||| |||||||||||||| |||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  23207112 tgaattgatttatgtttggatacacttttttacaagtgatt-ttatgagttgatgttgttt-gatagtttgaatcaaaattaattttgaa 23207199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 8424782 - 8424861
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttga 101  Q
    ||||||||||||| ||||   || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  8424782 ttatgtttggatacacttcaatagaagtgattcttatgagttgatgttgtttgaatagtttgaatcaaaattgattttga 8424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 31084264 - 31084175
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    ||||||| |||||||||||||| |||| || |||||||||| |||||| ||||| || |||||||||||||||||| ||||||||||||||    
T  31084264 tgaattgatttatgtttggatacacttctt-aaaagtgattcttatgacttgatattatttggatagtttgaatcataattgattttgaat 31084175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 35425358 - 35425300
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35425358 aagtgattcttatgagttgatattgtttggatagtttgaatcaaaattgattttgaatg 35425300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 48189518 - 48189576
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48189518 aagtgattcttatgagttgatgttgtttggatagtttgaattaaaattgattttgaatg 48189576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 38340862 - 38340772
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||||||| ||| || |||||| ||| |||| |||||| |||||||||||||||||||| |||||||||||| ||||    
T  38340862 tgaattgatttatgtttggatatgcttatt-aaaagtaatttttataagttgacgttgtttggatagtttgaataaaaattgattttaaatg 38340772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 52966853 - 52966944
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| ||||||||||| ||  ||   |||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  52966853 tgaattgatttatgtttgggtaccctcacttaaaagtgattcttatgagttgatgttgtttagataggttgaatcaaaattgattttaaatg 52966944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 22737009 - 22736947
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  22737009 ttaaaagtgattattatgagttaatgttgttgggatggtttgaatcaaaattgattttgaatg 22736947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 30811608 - 30811666
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  30811608 aagtgattcttatgacttgatattgtttggatagtttgaatcaaaattgattttgaatg 30811666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 45423814 - 45423916
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataacc 114  Q
    |||||||||||||||||||||| |    ||||||||||| |||| | || ||||||||||||||| |||||||||||||||||||| ||| | ||| |||    
T  45423814 aattggtttatgtttggatatattaaagtaaaagtgattcttatcaattcatgttgtttggatagcttgaatcaaaattgattttggatgtacaattacc 45423913  T
Q  115 aaa 117  Q
    |||    
T  45423914 aaa 45423916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 23496351 - 23496290
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  23496351 taaaagtgattcttgcgggttgatgttgtttggatagtttgaatcaaaattgattttgaatg 23496290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 32357566 - 32357479
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaa 102  Q
    ||||| |||||||||| | | |||  ||||||||||||| ||||| ||||||||||||||| || ||||||| |||||||||||||||    
T  32357566 aattgatttatgtttgaaaacactcatttaaaagtgattcttatgtgttgatgttgtttgggtactttgaattaaaattgattttgaa 32357479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 21225037 - 21224963
Alignment:
Q  23 tatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatt 97  Q
    |||||||||||| ||||  ||||||| |||| ||| |||||||||| |||| |||||||||||||||||||||||    
T  21225037 tatgtttggatacactttcttaaaagcgattcttacgagttgatgtcgttttgatagtttgaatcaaaattgatt 21224963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 44939491 - 44939549
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  44939491 aagtgattcttatgagttgatgttgtttgaatagttttaatcaaaattaattttgaatg 44939549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 35930796 - 35930704
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| |||||| ||||||| |||  | || |||| ||| ||||||||||||  ||||||||| |||| |||||||||||||||||||||    
T  35930796 atgaattgatttatgcttggatacactaatgtataagtcattcttatgagttgataatgtttggatggtttaaatcaaaattgattttgaatg 35930704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 55087593 - 55087630
Alignment:
Q  60 agttgatgttgtttggatagtttgaatcaaaattgatt 97  Q
    ||||||||||||||||||||||||||||||||||||||    
T  55087593 agttgatgttgtttggatagtttgaatcaaaattgatt 55087630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 30810018 - 30810069
Alignment:
Q  42 ttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaatt 93  Q
    |||||||||||| |||| | |||||| |||||||||||||||||||||||||    
T  30810018 ttaaaagtgattcttataaattgatgatgtttggatagtttgaatcaaaatt 30810069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 50664815 - 50664725
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||| |||||||||||||| ||    ||| |||||||| ||| ||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  50664815 tgaattgatttatgtttggatacacacacttagaagtgattcttaagagtt-atgttgtttagatagtttaaattaaaattgattttgaatg 50664725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 14959739 - 14959685
Alignment:
Q  50 gattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||| ||||||||||||||||||| |||  ||||||||||| |||||||||||||    
T  14959739 gatttttatgagttgatgttgtttagatgatttgaatcaaacttgattttgaatg 14959685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 37698485 - 37698519
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgatttt 99  Q
    |||||||||||||||||||||||||||||||||||    
T  37698485 atgttgtttggatagtttgaatcaaaattgatttt 37698519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 42475766 - 42475680
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgatttt 99  Q
    ||||||| ||| |||||| ||| ||||  ||||||| |||| |||||| ||| |||||||||||||  |||||||||||||| ||||    
T  42475766 tgaattgatttttgtttgaatacactttgttaaaagcgattcttatgaattgttgttgtttggatacattgaatcaaaattgctttt 42475680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 25848090 - 25847999
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||| ||||||||||||||   |   |||||| ||||| |||||||||  |||||||||||||| |||||| |||||||||||| ||||    
T  25848090 atgaattgatttatgtttggataccttcacttaaaaatgattcttatgagtttgtgttgtttggatag-ttgaataaaaattgattttaaatg 25847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 44610311 - 44610350
Alignment:
Q  64 gatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  44610311 gatgttgtttggatagtttg-atcaaaattgattttgaatg 44610350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 30811329 - 30811290
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  30811329 atgttgtttggatagttttgatcaaaattgattttgaatg 30811290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 53078363 - 53078328
Alignment:
Q  65 atgttgtttggatagtttgaatcaaaattgattttg 100  Q
    |||||||||||| |||||||||||||||||||||||    
T  53078363 atgttgtttggacagtttgaatcaaaattgattttg 53078328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 4984638 - 4984592
Alignment:
Q  13 tgaattggtttatgtttggatatacttgtttaaaagtgattgttatg 59  Q
    ||||||| |||||||||||||| ||| |||||||||||||| |||||    
T  4984638 tgaattgatttatgtttggatacactcgtttaaaagtgattcttatg 4984592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 41459099 - 41459039
Alignment:
Q  43 taaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||| |||| | || ||| |||||||||| ||||||| |||||||||||||||||    
T  41459099 taaaagtgattcttatcaattcatggtgtttggataatttgaat-aaaattgattttgaatg 41459039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 33329436 - 33329476
Alignment:
Q  64 gatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  33329436 gatgttgtttggatagtttcgatcaaaattgcttttgaatg 33329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 2307 - 2399
Alignment:
Q  8 tgagatgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttg 100  Q
    |||| ||||||| |||||||||||| | ||||||||||||||| || |||  |||||| ||||||| ||||||||||||||||||||||||||    
T  2307 tgaggtgaattgatttatgtttggacacacttgtttaaaagtggtttttacaagttgacgttgtttagatagtttgaatcaaaattgattttg 2399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 253186 - 253095
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||| ||||||||||||||   |   |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  253186 atgaattgatttatgtttggataccttcagttaaaagtgattcttatgagttaatgttgtttggatagattgaatcaaaattgattttgaat 253095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 29175 - 29257
Alignment:
Q  22 ttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    ||||||||||||| ||||   || |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29175 ttatgtttggatacactttaatagaagttattcttatgaattgatgttgtttggatagtttgaatcaaaattgattttgaatg 29257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 9158 - 9077
Alignment:
Q  23 tatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatg 104  Q
    |||||||||||| |||   || ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  9158 tatgtttggatacactcacttgaaagtgattcttatgagtagatgttgtttggatagtttgaattaaaattgattttgaatg 9077  T

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Target: scaffold0217 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 2070 - 2161
Alignment:
Q  12 atgaattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaat 103  Q
    |||||||| |||||||||||||  |||  | ||||||||||| | |||  ||||||||||||||||||||| | ||||||||||||||||||    
T  2070 atgaattgatttatgtttggatgcactcatataaaagtgattatcatggcttgatgttgtttggatagtttaagtcaaaattgattttgaat 2161  T

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Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 46818 - 46716
Alignment:
Q  15 aattggtttatgtttggatatacttgtttaaaagtgattgttatgagttgatgttgtttggatagtttgaatcaaaattgattttgaatggaaaataacc 114  Q
    |||||||||||||||||||||| |    ||||||||||| |||| | || |||||||||||||||||  ||||||||||||||||| ||| | ||| |||    
T  46818 aattggtttatgtttggatatattaaagtaaaagtgatttttatcaattcatgttgtttggatagttcaaatcaaaattgattttggatgtataattacc 46719  T
Q  115 aaa 117  Q
    |||    
T  46718 aaa 46716  T

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Target: scaffold0394 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 5903 - 5966
Alignment:
Q  46 aagtgattgttatgagttgatgttgtttggatag-----tttgaatcaaaattgattttgaatg 104  Q
    |||||||| || || |||||||||||||||||||     |||||||||||||||||||||||||    
T  5903 aagtgattcttgtgggttgatgttgtttggatagtttaatttgaatcaaaattgattttgaatg 5966  T

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