View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11506_high_7 (Length: 241)

Name: NF11506_high_7
Description: NF11506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11506_high_7
NF11506_high_7
[»] chr8 (43 HSPs)
chr8 (42-180)||(29023307-29023445)
chr8 (108-225)||(28425425-28425542)
chr8 (107-225)||(22936745-22936863)
chr8 (113-234)||(4941739-4941860)
chr8 (111-190)||(3467607-3467686)
chr8 (114-235)||(42143323-42143444)
chr8 (139-235)||(44926870-44926965)
chr8 (111-220)||(3097162-3097271)
chr8 (113-190)||(27649819-27649896)
chr8 (139-235)||(26243153-26243249)
chr8 (113-235)||(36113999-36114120)
chr8 (111-180)||(44926939-44927008)
chr8 (112-235)||(25697917-25698039)
chr8 (109-188)||(38114520-38114599)
chr8 (137-235)||(31201655-31201752)
chr8 (108-225)||(33626987-33627104)
chr8 (139-224)||(40742279-40742364)
chr8 (112-190)||(36121502-36121580)
chr8 (113-190)||(41289016-41289093)
chr8 (110-190)||(15206770-15206850)
chr8 (112-192)||(30085596-30085676)
chr8 (139-222)||(440173-440256)
chr8 (194-233)||(29023270-29023309)
chr8 (134-188)||(6876602-6876656)
chr8 (139-224)||(6399092-6399177)
chr8 (109-190)||(30759259-30759340)
chr8 (152-225)||(40742163-40742236)
chr8 (133-190)||(40792182-40792239)
chr8 (139-235)||(25497721-25497816)
chr8 (130-190)||(36779465-36779524)
chr8 (139-190)||(3465424-3465475)
chr8 (152-235)||(42149034-42149117)
chr8 (137-190)||(3619051-3619104)
chr8 (139-235)||(8125000-8125095)
chr8 (114-190)||(24897547-24897623)
chr8 (130-190)||(30081626-30081686)
chr8 (139-179)||(35615794-35615834)
chr8 (152-190)||(2071565-2071603)
chr8 (139-181)||(26125840-26125882)
chr8 (112-190)||(26491007-26491085)
chr8 (139-180)||(26575902-26575943)
chr8 (117-178)||(38152137-38152198)
chr8 (139-180)||(45275779-45275820)
[»] chr4 (61 HSPs)
chr4 (114-235)||(30842138-30842258)
chr4 (113-235)||(43781477-43781598)
chr4 (107-235)||(43772075-43772203)
chr4 (113-235)||(39636791-39636913)
chr4 (109-205)||(28987054-28987150)
chr4 (109-225)||(54150542-54150658)
chr4 (112-234)||(25312722-25312844)
chr4 (118-235)||(48407661-48407777)
chr4 (109-225)||(51922956-51923072)
chr4 (110-224)||(9889290-9889403)
chr4 (111-225)||(46830025-46830139)
chr4 (112-233)||(6138577-6138698)
chr4 (111-236)||(48550222-48550347)
chr4 (112-190)||(14072553-14072631)
chr4 (111-225)||(19592187-19592301)
chr4 (109-225)||(39187750-39187866)
chr4 (111-223)||(13167543-13167655)
chr4 (111-190)||(32238015-32238094)
chr4 (111-233)||(49519738-49519863)
chr4 (115-233)||(13183010-13183128)
chr4 (109-235)||(16566311-16566437)
chr4 (112-190)||(26651805-26651883)
chr4 (108-221)||(14564099-14564212)
chr4 (107-224)||(29149259-29149376)
chr4 (139-235)||(46926054-46926150)
chr4 (109-224)||(6505218-6505333)
chr4 (112-190)||(26426072-26426150)
chr4 (115-223)||(9893729-9893837)
chr4 (118-190)||(55638718-55638790)
chr4 (110-219)||(41866176-41866285)
chr4 (112-221)||(48908294-48908402)
chr4 (112-192)||(5835799-5835878)
chr4 (115-190)||(54153095-54153170)
chr4 (113-235)||(14054857-14054979)
chr4 (111-233)||(15603368-15603490)
chr4 (139-224)||(49136539-49136624)
chr4 (109-190)||(53532028-53532109)
chr4 (146-190)||(19599487-19599531)
chr4 (118-190)||(42944861-42944933)
chr4 (167-222)||(56241847-56241902)
chr4 (139-185)||(14076070-14076116)
chr4 (112-190)||(31520328-31520406)
chr4 (112-178)||(54655295-54655361)
chr4 (139-185)||(54735635-54735681)
chr4 (145-190)||(33574229-33574274)
chr4 (111-179)||(4649885-4649953)
chr4 (139-222)||(16202504-16202585)
chr4 (115-190)||(45779970-45780044)
chr4 (139-178)||(48556616-48556655)
chr4 (109-176)||(54683453-54683520)
chr4 (169-235)||(2175161-2175227)
chr4 (136-186)||(38263954-38264004)
chr4 (139-177)||(48407572-48407610)
chr4 (136-225)||(523166-523255)
chr4 (139-180)||(22605745-22605786)
chr4 (111-156)||(26459852-26459897)
chr4 (139-180)||(28963244-28963285)
chr4 (139-180)||(29385432-29385473)
chr4 (152-225)||(48550424-48550497)
chr4 (139-180)||(51677641-51677682)
chr4 (108-164)||(48550395-48550451)
[»] chr6 (20 HSPs)
chr6 (111-235)||(13739227-13739350)
chr6 (111-235)||(13744727-13744850)
chr6 (110-224)||(33898960-33899074)
chr6 (109-233)||(29409205-29409329)
chr6 (107-190)||(5584001-5584084)
chr6 (111-190)||(6208019-6208098)
chr6 (114-190)||(17829957-17830033)
chr6 (111-190)||(1312395-1312474)
chr6 (112-235)||(10826112-10826235)
chr6 (139-190)||(21254863-21254914)
chr6 (107-190)||(26274579-26274662)
chr6 (112-179)||(29399750-29399817)
chr6 (139-190)||(32599446-32599497)
chr6 (114-190)||(16121960-16122036)
chr6 (139-178)||(699634-699673)
chr6 (111-190)||(3605708-3605786)
chr6 (139-190)||(15151489-15151540)
chr6 (113-179)||(31132540-31132606)
chr6 (130-188)||(21455948-21456006)
chr6 (139-180)||(10683843-10683884)
[»] chr2 (43 HSPs)
chr2 (111-235)||(23358288-23358411)
chr2 (102-221)||(36548243-36548362)
chr2 (109-233)||(2215284-2215408)
chr2 (112-235)||(7472629-7472751)
chr2 (110-205)||(31562640-31562735)
chr2 (139-233)||(44619043-44619137)
chr2 (110-235)||(9988454-9988579)
chr2 (111-235)||(1944993-1945117)
chr2 (139-235)||(2213677-2213773)
chr2 (112-220)||(31224725-31224833)
chr2 (111-190)||(8170387-8170466)
chr2 (113-190)||(32502060-32502137)
chr2 (114-190)||(34433263-34433339)
chr2 (109-224)||(7296196-7296311)
chr2 (107-233)||(39141420-39141545)
chr2 (112-225)||(26207884-26207997)
chr2 (109-190)||(42089480-42089561)
chr2 (112-224)||(2213547-2213659)
chr2 (117-190)||(42515936-42516009)
chr2 (139-224)||(45714650-45714735)
chr2 (112-224)||(28127242-28127354)
chr2 (110-190)||(36312351-36312431)
chr2 (111-190)||(5916196-5916275)
chr2 (111-190)||(12110949-12111027)
chr2 (115-190)||(14821237-14821312)
chr2 (139-190)||(25747864-25747915)
chr2 (113-190)||(30007509-30007586)
chr2 (139-223)||(41580692-41580776)
chr2 (137-192)||(8041351-8041406)
chr2 (109-223)||(7295300-7295414)
chr2 (139-221)||(28261338-28261420)
chr2 (109-190)||(3853975-3854056)
chr2 (139-227)||(38600425-38600513)
chr2 (139-190)||(16467161-16467212)
chr2 (139-190)||(23267346-23267397)
chr2 (105-164)||(27911492-27911551)
chr2 (108-217)||(28641690-28641799)
chr2 (136-192)||(34997215-34997271)
chr2 (139-190)||(18511177-18511228)
chr2 (111-190)||(26806210-26806288)
chr2 (112-190)||(3602415-3602493)
chr2 (139-180)||(32496583-32496624)
chr2 (110-151)||(43436264-43436305)
[»] scaffold0983 (1 HSPs)
scaffold0983 (112-235)||(2225-2348)
[»] chr3 (44 HSPs)
chr3 (112-235)||(42318351-42318473)
chr3 (111-235)||(38125398-38125521)
chr3 (109-225)||(10334169-10334285)
chr3 (108-223)||(50664791-50664906)
chr3 (107-190)||(23496383-23496466)
chr3 (111-190)||(48189398-48189477)
chr3 (109-235)||(4984602-4984728)
chr3 (110-190)||(30811487-30811567)
chr3 (110-190)||(42475775-42475855)
chr3 (111-190)||(35425399-35425477)
chr3 (110-217)||(52966764-52966871)
chr3 (111-225)||(38172263-38172377)
chr3 (139-224)||(35930770-35930855)
chr3 (109-190)||(44939370-44939451)
chr3 (112-220)||(10853224-10853332)
chr3 (111-190)||(15511332-15511411)
chr3 (111-190)||(55154567-55154646)
chr3 (107-224)||(53074935-53075051)
chr3 (112-224)||(26519696-26519808)
chr3 (110-236)||(3348263-3348389)
chr3 (133-190)||(19877483-19877540)
chr3 (112-220)||(38340841-38340949)
chr3 (108-190)||(52813281-52813363)
chr3 (130-235)||(23207043-23207148)
chr3 (146-235)||(53179869-53179958)
chr3 (139-190)||(8424714-8424765)
chr3 (136-190)||(34561174-34561228)
chr3 (113-234)||(21225012-21225133)
chr3 (151-224)||(44224794-44224867)
chr3 (139-190)||(14651086-14651137)
chr3 (152-225)||(31084238-31084311)
chr3 (139-180)||(48253879-48253920)
chr3 (139-192)||(49526653-49526706)
chr3 (111-235)||(20813167-20813290)
chr3 (143-190)||(29716674-29716721)
chr3 (109-164)||(41459292-41459347)
chr3 (113-190)||(16246054-16246129)
chr3 (107-165)||(31084283-31084341)
chr3 (111-165)||(31618368-31618422)
chr3 (115-165)||(35930879-35930929)
chr3 (114-220)||(45423728-45423833)
chr3 (136-190)||(53567998-53568051)
chr3 (113-178)||(5045970-5046035)
chr3 (139-180)||(45488485-45488526)
[»] chr5 (37 HSPs)
chr5 (110-235)||(32454572-32454697)
chr5 (109-235)||(40885246-40885372)
chr5 (139-235)||(41740574-41740670)
chr5 (139-235)||(39987948-39988044)
chr5 (108-235)||(8049001-8049128)
chr5 (111-221)||(5710339-5710449)
chr5 (110-235)||(40495310-40495435)
chr5 (112-225)||(41834937-41835050)
chr5 (109-225)||(10058119-10058235)
chr5 (108-188)||(32030796-32030876)
chr5 (109-219)||(24045881-24045991)
chr5 (112-224)||(3667900-3668012)
chr5 (139-235)||(16158446-16158542)
chr5 (111-235)||(22482224-22482348)
chr5 (113-235)||(13253038-13253159)
chr5 (111-224)||(35760235-35760348)
chr5 (113-225)||(9275439-9275551)
chr5 (111-190)||(2430250-2430329)
chr5 (115-190)||(7715020-7715095)
chr5 (109-235)||(7385883-7386009)
chr5 (112-190)||(33953856-33953934)
chr5 (139-220)||(3060205-3060286)
chr5 (111-235)||(42146343-42146466)
chr5 (109-235)||(40791021-40791146)
chr5 (139-186)||(4292233-4292280)
chr5 (111-190)||(7178857-7178936)
chr5 (137-190)||(34106926-34106979)
chr5 (109-190)||(35847841-35847922)
chr5 (139-192)||(16843607-16843660)
chr5 (130-190)||(2694732-2694792)
chr5 (110-190)||(19203957-19204036)
chr5 (139-223)||(23914235-23914319)
chr5 (107-190)||(3747540-3747623)
chr5 (139-180)||(4295606-4295647)
chr5 (139-180)||(41741604-41741645)
chr5 (149-181)||(4295635-4295667)
chr5 (142-186)||(27021212-27021256)
[»] chr1 (45 HSPs)
chr1 (109-235)||(47123431-47123557)
chr1 (106-236)||(26058285-26058415)
chr1 (109-235)||(35536117-35536242)
chr1 (107-190)||(10470679-10470762)
chr1 (111-235)||(42850176-42850300)
chr1 (111-225)||(1199882-1199996)
chr1 (111-221)||(50977297-50977407)
chr1 (113-190)||(11023289-11023366)
chr1 (109-190)||(13056087-13056168)
chr1 (167-235)||(291730-291798)
chr1 (117-225)||(40229433-40229541)
chr1 (111-235)||(48510953-48511077)
chr1 (108-235)||(35569156-35569283)
chr1 (110-236)||(27801608-27801734)
chr1 (111-225)||(31223429-31223543)
chr1 (106-235)||(12247465-12247593)
chr1 (110-235)||(12468257-12468381)
chr1 (105-190)||(50406220-50406305)
chr1 (111-235)||(20800234-20800358)
chr1 (111-190)||(7826311-7826390)
chr1 (117-190)||(45710138-45710211)
chr1 (111-235)||(6166155-6166278)
chr1 (111-227)||(34718504-34718620)
chr1 (111-235)||(43728835-43728958)
chr1 (139-222)||(15884285-15884368)
chr1 (113-190)||(5410729-5410806)
chr1 (113-190)||(25230096-25230173)
chr1 (114-235)||(36205236-36205357)
chr1 (112-190)||(6464697-6464775)
chr1 (103-190)||(29441274-29441361)
chr1 (130-190)||(15576544-15576604)
chr1 (152-220)||(16556295-16556362)
chr1 (111-190)||(7765241-7765319)
chr1 (108-190)||(13344863-13344944)
chr1 (109-190)||(40352481-40352561)
chr1 (133-190)||(43134540-43134597)
chr1 (111-151)||(291704-291744)
chr1 (111-190)||(25061316-25061395)
chr1 (139-186)||(49242967-49243014)
chr1 (114-176)||(6061246-6061308)
chr1 (137-190)||(4347064-4347116)
chr1 (139-180)||(41512823-41512864)
chr1 (112-164)||(4369776-4369828)
chr1 (130-190)||(30557624-30557683)
chr1 (137-177)||(46033129-46033169)
[»] chr7 (42 HSPs)
chr7 (106-235)||(3622398-3622527)
chr7 (114-225)||(39391083-39391194)
chr7 (108-235)||(37562612-37562739)
chr7 (136-235)||(47217509-47217608)
chr7 (110-220)||(39977609-39977719)
chr7 (112-236)||(41715698-41715822)
chr7 (110-192)||(37639515-37639597)
chr7 (112-225)||(3342842-3342955)
chr7 (114-235)||(48134622-48134742)
chr7 (114-190)||(43631642-43631718)
chr7 (114-225)||(47021971-47022082)
chr7 (111-235)||(48459752-48459876)
chr7 (111-190)||(34010426-34010504)
chr7 (112-190)||(19097484-19097562)
chr7 (139-235)||(9456147-9456242)
chr7 (110-224)||(3375543-3375657)
chr7 (111-236)||(32186981-32187106)
chr7 (110-190)||(10371900-10371980)
chr7 (111-190)||(24770854-24770933)
chr7 (115-190)||(46541687-46541762)
chr7 (110-188)||(34365924-34366002)
chr7 (111-235)||(42904595-42904719)
chr7 (118-190)||(44967349-44967421)
chr7 (143-225)||(3750738-3750820)
chr7 (113-235)||(38230110-38230232)
chr7 (115-188)||(386428-386501)
chr7 (133-178)||(12964697-12964742)
chr7 (139-180)||(25472152-25472193)
chr7 (110-235)||(43737881-43738006)
chr7 (139-190)||(36920149-36920200)
chr7 (111-225)||(37008296-37008407)
chr7 (139-185)||(34010932-34010978)
chr7 (106-220)||(39634103-39634217)
chr7 (158-235)||(32205967-32206044)
chr7 (135-220)||(40903135-40903219)
chr7 (130-190)||(2839377-2839437)
chr7 (139-190)||(12632054-12632105)
chr7 (137-180)||(25472135-25472178)
chr7 (103-190)||(42752126-42752213)
chr7 (139-189)||(12212440-12212490)
chr7 (139-180)||(37371339-37371380)
chr7 (148-188)||(42740481-42740521)
[»] scaffold0369 (1 HSPs)
scaffold0369 (111-233)||(8472-8594)
[»] scaffold0381 (1 HSPs)
scaffold0381 (110-224)||(9143-9256)
[»] scaffold0217 (1 HSPs)
scaffold0217 (109-224)||(1981-2096)
[»] scaffold0394 (1 HSPs)
scaffold0394 (109-190)||(5784-5865)
[»] scaffold0005 (1 HSPs)
scaffold0005 (108-221)||(253163-253276)
[»] scaffold0007 (1 HSPs)
scaffold0007 (112-190)||(29080-29158)
[»] scaffold0172 (1 HSPs)
scaffold0172 (110-190)||(15213-15292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (139-227)||(118394-118482)
[»] scaffold0041 (1 HSPs)
scaffold0041 (135-220)||(46799-46883)
[»] scaffold0168 (1 HSPs)
scaffold0168 (139-176)||(32058-32095)
[»] scaffold0097 (1 HSPs)
scaffold0097 (139-180)||(32446-32487)
[»] scaffold0068 (1 HSPs)
scaffold0068 (139-180)||(38384-38425)


Alignment Details
Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 29023445 - 29023307
Alignment:
Q  42 gttcagctctctctttacatgtatttttggcattttatagtttctaggatgaaaaatgctaaatttcttagtgtgtgtttggtatggtggtgacgaaaat 141  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  29023445 gttcagctctctctttgcatgtatttttggcattttatagtttctaggataaaaaatgctaaattttttagtgtgtgttcggtatggtggtggcgaaaat 29023346  T
Q  142 tgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29023345 tgattttgatagaattgagtttgagagaattgattttga 29023307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 28425425 - 28425542
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||| | |||| ||||||| |    
T  28425425 cttagtgtgtgtttggtatgacggtggcgaaaattgattttgatagaattgattttgttagaattgattttggttaaaagtgagtttgaggtgaattgat 28425524  T
Q  208 ttatatttggatacactt 225  Q
    |||| |||||||||||||    
T  28425525 ttatgtttggatacactt 28425542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 22936745 - 22936863
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattgg 206  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |   |  |||||||     
T  22936745 tcttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtgagttgaatgtgaattga 22936844  T
Q  207 tttatatttggatacactt 225  Q
    ||||| |||||||||||||    
T  22936845 tttatgtttggatacactt 22936863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 4941739 - 4941860
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||||||| |||| | | |||||||| ||||| |||||||||||| |||||||||||||||||||||||| | |||| ||||||| |||||     
T  4941739 tgtgtgtttggtatggcggtggctagaattgattctgatataattgagtttgagagaattgattttgattaaaagtgagtttgaggtgaattgatttatg 4941838  T
Q  213 tttggatacacttgtttaaaag 234  Q
    |||||||| | || ||||||||    
T  4941839 tttggataaaattatttaaaag 4941860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 3467686 - 3467607
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  3467686 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 3467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 42143323 - 42143444
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    ||||||||||||||| |||| ||| |||||||| ||||| |||||||||||| | ||||||||||  |||||||||| | |||| ||||||| ||||| |    
T  42143323 gtgtgtttggtatggcggtggcgagaattgattatgatataattgagtttgagaaaattgattttagttaaaagtgagtttgaggtgaattgatttatgt 42143422  T
Q  214 ttggatacacttgtttaaaagt 235  Q
    ||||||| |||| |||||||||    
T  42143423 ttggataaacttatttaaaagt 42143444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 44926965 - 44926870
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | |||| |||||||||||||||||||||||    
T  44926965 aattgagtttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gattatgtttggatacacttgtttaaaagt 44926870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 3097162 - 3097271
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||| |  |||  || |||| |||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||| ||||    
T  3097162 agtgtgtgtttggtatagcagtggtgagaattaattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgatatgaattgattta 3097261  T
Q  211 tatttggata 220  Q
    | ||||||||    
T  3097262 tgtttggata 3097271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 27649896 - 27649819
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||  || |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27649896 tgtgtgtttggttgggcggtgacgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtga 27649819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 26243249 - 26243153
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||||||||| | ||||||||||||  |||||||||| | ||| |||||||| ||||| |||||||| | ||||||||||||    
T  26243249 aattgattttgatagaattgagtttaagagaattgatttttgttaaaagtgagtttgatatgaattgatttatgtttggatataattgtttaaaagt 26243153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 36113999 - 36114120
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||||||  || |  || ||||||||||||||||||||||||||| |||||||||||||||||||||| | | |||  |  ||||| ||||     
T  36113999 tgtgtgtttggtatgacggcggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtaagtttgatgtagattgg-ttatg 36114097  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    |||||||||||| ||||||||||    
T  36114098 tttggatacactcgtttaaaagt 36114120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 44927008 - 44926939
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||| |||||    
T  44927008 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgatagaattgagtttga 44926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 25697917 - 25698039
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||| ||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |  ||  |||||| | ||||    
T  25697917 gtgtgtgcttggtatagcggtggagagaattgattttgatagaattgagtttgagagaattgattttgcttaaaagtgagttggatgtgaatt-gattat 25698015  T
Q  212 atttggatacacttgtttaaaagt 235  Q
     |||||||| |||| |||||||||    
T  25698016 gtttggataaacttatttaaaagt 25698039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 38114599 - 38114520
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    |||||||||||||||| ||| ||||  || |||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  38114599 ttagtgtgtgtttggtttggcggtggtgagaatttattttgatagaattgagtttgagagaattgattttggttaaaagt 38114520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 31201752 - 31201655
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||| ||| ||| ||||||||||||||||||||||||| |||||||| |||| | |||||||||| ||||| ||||||| || ||| ||||||||    
T  31201752 aaaattgagttttataaaattgagtttgacagaattgattttaattaaaagcgaat-taagatgaattgatttatgtttggattcatttgcttaaaagt 31201655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 33626987 - 33627104
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    |||||||||||||||||  || ||||  |  ||||||||||||||||||||||||||| ||||||||||||  |||||| ||| |  || | |||||| |    
T  33626987 cttagtgtgtgtttggttcggcggtggagggaattgattttgatagaattgagtttgaaagaattgattttatttaaaactgagttggataagaattgat 33627086  T
Q  208 ttatatttggatacactt 225  Q
    |||| |||||||||||||    
T  33627087 ttatgtttggatacactt 33627104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 40742279 - 40742364
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    ||||||||||||||||||||||||| | ||||||||||||  |||||||||| | |||  ||||||| ||||| ||||||||||||    
T  40742279 aattgattttgatagaattgagtttaaaagaattgattttcgttaaaagtgagtttgatctgaattgatttatgtttggatacact 40742364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 36121502 - 36121580
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||  | |||| ||| ||||||||||||||||||||||||| |  |||||||||||| ||||||||||    
T  36121502 gtgtgtgtttggtacagcggtgtcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtga 36121580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 41289016 - 41289093
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||| ||||||| ||| || | ||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  41289016 tgtgggtttggtttggcggcggcgagaattgattttgacagaattgagtttgagagaattgattttaattaaaagtga 41289093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 15206850 - 15206770
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||   ||||||  || |||| |||||||||||||||||||||||| |||||||||||  |||||||||    
T  15206850 tagtgtgtgtttggttcagtggtggagagaattaattttgatagaattgagtttgacaaaattgattttgggtaaaagtga 15206770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 30085596 - 30085676
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    ||||||||||||||| | || |  || |||||||||||||| |||||||||| | ||||||||||||| ||||||||||||    
T  30085596 gtgtgtgtttggtatagcggcggtgagaattgattttgatataattgagtttaagagaattgattttggttaaaagtgaat 30085676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 440173 - 440256
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggataca 222  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||| |||| |  ||  ||||||| ||||| ||||||||||    
T  440173 aattgattttgatagaattgagtctgagagaattgattttggttaaatgtgagttggatgtgaattgatttatgtttggataca 440256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 29023309 - 29023270
Alignment:
Q  194 tgagatgaattggtttatatttggatacacttgtttaaaa 233  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29023309 tgagatgaattggtttatatttggatacacttgtttaaaa 29023270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 6876602 - 6876656
Alignment:
Q  134 acgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    ||||||||| || || |||||||||||||| ||||||||||||||||||||||||    
T  6876602 acgaaaattaatctttatagaattgagtttaacagaattgattttgattaaaagt 6876656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 6399092 - 6399177
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    |||||||| || ||||||||||||||| |||||||||| || |||||||||| | |||  ||||||| ||||| ||| ||||||||    
T  6399092 aattgattctggtagaattgagtttgatagaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttcgatacact 6399177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 30759259 - 30759340
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| ||| | ||   | |||||||||| ||| |||||||||||| ||||||||||||| ||||||||||    
T  30759259 ttagtgtgtgtttggtttggcgatgggaagaattgattttaatataattgagtttgagagaattgattttggttaaaagtga 30759340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 40742236 - 40742163
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacactt 225  Q
    |||||||||||||| ||||||||||||| |||||||||| |  ||  ||||||| ||||| |||||||||||||    
T  40742236 agaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatacactt 40742163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 40792182 - 40792239
Alignment:
Q  133 gacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| ||| |||||| ||||| | ||||||||||||||||||||||    
T  40792182 gacgaaaattgattttaataaaattgattttgatataattgattttgattaaaagtga 40792239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 25497816 - 25497721
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||||||| ||||||||||   ||||||||||||| |||||||||| |  ||  |||||| | |||| ||||||||||||| |||||||||    
T  25497816 aattgattttgataaaattgagtttaggagaattgattttggttaaaagtgagttggatgtgaatt-gattatgtttggatacacttatttaaaagt 25497721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 36779524 - 36779465
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||| |||||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  36779524 ggtgacgagaattgattttgatataattgattttgt-agaattgattttgattaaaagtga 36779465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 3465424 - 3465475
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  3465424 aattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 3465475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 42149117 - 42149034
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||| | ||| | ||||||||||| |||||||||| | |||| ||||||| ||||| |||||||| |||| |||||||||    
T  42149117 agaattgattctgatataattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggatagacttatttaaaagt 42149034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 3619051 - 3619104
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||||| |||||  ||||||||| |||| ||||||||    
T  3619051 aaaattgattttgatagaattgattttgaatgaattgattctgatcaaaagtga 3619104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 8125095 - 8125000
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||| | |||| |||||||| ||||||||||||| ||| |||||| | |||  |||||| | |||| ||||||||||||  |||||||||    
T  8125095 aattgattttggttgaatcgagtttgagagaattgattttggttagaagtgagtttgatgtgaatt-gattatgtttggatacactcatttaaaagt 8125000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 24897547 - 24897623
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||| || |   | |||||||||||||| ||||||||||   ||||||||||||| ||||||||||    
T  24897547 gtgtgtttggtatggcggcggtaagaattgattttgataaaattgagtttatgagaattgattttggttaaaagtga 24897623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 30081626 - 30081686
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||||| |||||| ||||  | ||||||||||  ||||||||||    
T  30081626 ggtgacgaaaattgattttgataaaattgattttgtgaaaattgattttagttaaaagtga 30081686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 35615834 - 35615794
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttg 179  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  35615834 aattgattttgatagaattgagtttgacaagattgattttg 35615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 2071565 - 2071603
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  2071565 agaattgattttgacagaattgattttgactaaaagtga 2071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 26125882 - 26125840
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgat 181  Q
    |||| |||||||||||||||||||| | |||||||||||||||    
T  26125882 aattaattttgatagaattgagtttaagagaattgattttgat 26125840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 26491085 - 26491007
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||| ||| |||||| | |||||||| ||  | |||||| ||||  ||||||||||||| ||||||||||    
T  26491085 gtgtgtgtttggtgtggcggtgactagaattgattctgtcaaaattgattttggtagaattgattttggttaaaagtga 26491007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 26575943 - 26575902
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| | ||| ||||||||||||||    
T  26575943 aattgattttgatagaattgattctgatagaattgattttga 26575902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 38152137 - 38152198
Alignment:
Q  117 tgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgatttt 178  Q
    |||||||| |||||| |  || ||||||||||||||||||| ||||||| | ||||||||||    
T  38152137 tgtttggtttggtggcggtgagaattgattttgatagaattaagtttgagaaaattgatttt 38152198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 45275779 - 45275820
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  45275779 aattgattctgatagaattgattctgacagaattgattttga 45275820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 30842258 - 30842138
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||| | |||| |    
T  30842258 gtgtgtttggtatggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtttgaggtgaatt-gattatgt 30842160  T
Q  214 ttggatacacttgtttaaaagt 235  Q
    |||||||||||||||| |||||    
T  30842159 ttggatacacttgtttgaaagt 30842138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 43781477 - 43781598
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | ||||     
T  43781477 tgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gattatg 43781575  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    |||||||||||||||||||||||    
T  43781576 tttggatacacttgtttaaaagt 43781598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 43772075 - 43772203
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattgg 206  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |  ||  ||||| |     
T  43772075 tcttagtgtgtgtttggtttggtggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatcga 43772174  T
Q  207 tttatatttggatacacttgtttaaaagt 235  Q
    ||||| ||||||||||||| |||| ||||    
T  43772175 tttatgtttggatacacttttttagaagt 43772203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 39636913 - 39636791
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||||||  |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  ||||||| |||||     
T  39636913 tgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttggatgtgaattgatttatg 39636814  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    |||||||||||||  ||||||||    
T  39636813 tttggatacacttacttaaaagt 39636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 28987150 - 28987054
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||||    
T  28987150 ttagtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaattg 28987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 54150658 - 54150542
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  ||||||| ||    
T  54150658 ttagtgtgtgtttggtatggcggtggcaagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttagatgtgaattgatt 54150559  T
Q  209 tatatttggatacactt 225  Q
    | | |||||||||||||    
T  54150558 tttgtttggatacactt 54150542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 234
Target Start/End: Complemental strand, 25312844 - 25312722
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  ||||||| ||| |    
T  25312844 gtgtgtgtttggtttggcggtaacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttagatgtgaattgattttt 25312745  T
Q  212 atttggatacacttgtttaaaag 234  Q
     |||||||||||||  |||||||    
T  25312744 gtttggatacactttgttaaaag 25312722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 48407661 - 48407777
Alignment:
Q  118 gtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttgg 217  Q
    |||||| |||| | |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | |||| |||||    
T  48407661 gtttggaatggcgctgacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gattatgtttgg 48407759  T
Q  218 atacacttgtttaaaagt 235  Q
    |||||||||||| |||||    
T  48407760 atacacttgtttgaaagt 48407777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 51923072 - 51922956
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||    
T  51923072 ttagtgtgtgtttggtatggcggcgacgagaattgattttgttagaattgagtttgagagaattgattttggttaaaagtgagttgaatctgaattgatt 51922973  T
Q  209 tatatttggatacactt 225  Q
    ||| |||||||||||||    
T  51922972 tatgtttggatacactt 51922956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 9889290 - 9889403
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    |||| |||||||||||||| ||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |  || ||||||| || |    
T  9889290 tagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttagatatgaatt-gtat 9889388  T
Q  210 atatttggatacact 224  Q
    || ||||||||||||    
T  9889389 atgtttggatacact 9889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 46830025 - 46830139
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |  |||||||||||| |||||||||| |  ||  ||||||| ||||    
T  46830025 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgattta 46830124  T
Q  211 tatttggatacactt 225  Q
    | |||||||||||||    
T  46830125 tgtttggatacactt 46830139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 6138577 - 6138698
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||| ||| ||||  || ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |  ||  ||||||| |||||    
T  6138577 gtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgaaataattgattttggttaaaagtgagttggatgtgaattgatttat 6138676  T
Q  212 atttggatacacttgtttaaaa 233  Q
     ||||||||||||| |||||||    
T  6138677 gtttggatacacttatttaaaa 6138698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 48550347 - 48550222
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||| |  ||  | ||||| ||||    
T  48550347 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgattta 48550248  T
Q  211 tatttggatacacttgtttaaaagta 236  Q
    | ||||||| ||||  ||||||||||    
T  48550247 tgtttggatgcactcatttaaaagta 48550222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 14072631 - 14072553
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||| ||||  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14072631 gtgtgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgtttaaaagtga 14072553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 19592187 - 19592301
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||| ||||| ||||  || ||||||||||||||||||||||||| | ||||||||||||| |||||||||| |  ||  ||||||| ||||    
T  19592187 agtgtgtgtttgatatggcggtggggagaattgattttgatagaattgagttttagagaattgattttggttaaaagtgagttggaagtgaattgattta 19592286  T
Q  211 tatttggatacactt 225  Q
    | |||||||||||||    
T  19592287 tgtttggatacactt 19592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 39187866 - 39187750
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatg-agatgaattggt 207  Q
    |||||||||||||||| ||| ||||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||| || |  ||||||| |    
T  39187866 ttagtgtgtgtttggtttggcggtggagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagt-aatttgaatgtgaattgat 39187768  T
Q  208 ttatatttggatacactt 225  Q
    |||| |||||||||||||    
T  39187767 ttatgtttggatacactt 39187750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 13167655 - 13167543
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||    |||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||||    
T  13167655 agtgtgtgtttggtatggcggtaggaaaaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 13167556  T
Q  211 tatttggatacac 223  Q
    |||||||||||||    
T  13167555 tatttggatacac 13167543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 32238015 - 32238094
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| | |||| ||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  32238015 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgagtttgagtgaattgattttggttaaaagtga 32238094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 49519863 - 49519738
Alignment:
Q  111 agtgtgtgtttggtatgg---tggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||||   |||||  || ||||| ||||||||||||||||||||| ||||||||||||| |||||||||| |  ||  ||||||  |    
T  49519863 agtgtgtgtttggtatggcggtggtggtgagaattggttttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaatttat 49519764  T
Q  208 ttatatttggatacacttgtttaaaa 233  Q
    |||| |||||||||||||| ||||||    
T  49519763 ttatgtttggatacacttgcttaaaa 49519738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 13183010 - 13183128
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatt 214  Q
    |||||||||||||  |||||||| |||||||||||||| |||||||| ||| | ||||||||||| |||||||  | | | || ||||||| ||||| ||    
T  13183010 tgtgtttggtatgacggtgacgataattgattttgataaaattgagtctgagataattgattttggttaaaagcaagtttaaggtgaattgatttatgtt 13183109  T
Q  215 tggatacacttgtttaaaa 233  Q
    ||||||||||| |||||||    
T  13183110 tggatacacttatttaaaa 13183128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 16566437 - 16566311
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||||||||||||||  |    || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||    
T  16566437 ttagtgtgtgtttggtatggcagcagggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgatt 16566338  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| |||||||||||||  ||||||||    
T  16566337 tatgtttggatacactttattaaaagt 16566311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 26651805 - 26651883
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||| || | ||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  26651805 gtgtgtgtttggtatggcggcggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtga 26651883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 14564099 - 14564212
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    |||||||||||||||||  || || |  || ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| |  || |||||||| |    
T  14564099 cttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgat 14564198  T
Q  208 ttatatttggatac 221  Q
    |||| |||||||||    
T  14564199 ttatgtttggatac 14564212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 29149259 - 29149376
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattgg 206  Q
    ||||||||||| |||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| | |||||||| |   |  |||||||     
T  29149259 tcttagtgtgtatttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattga 29149358  T
Q  207 tttatatttggatacact 224  Q
    ||||| ||||||||||||    
T  29149359 tttatgtttggatacact 29149376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 46926150 - 46926054
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||||||||||| | ||||| ||||| |||||||||| |  ||  ||||||| ||||| |||||||||||| ||||||||||    
T  46926150 aattgattttgatagaattgagtttgagaaaattgtttttggttaaaagtgagttagatgtgaattgatttatgtttggatacactcgtttaaaagt 46926054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 6505333 - 6505218
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||  ||| || | ||| |||||| |||||||||||||||||||| ||||||||||||| |||||| ||| | |||  ||||||| ||    
T  6505333 ttagtgtgtgtttggattggcggcgtcgataattgactttgatagaattgagtttgagagaattgattttggttaaaaatgagtttgatgtgaattgatt 6505234  T
Q  209 tatatttggatacact 224  Q
    ||| ||| ||||||||    
T  6505233 tatgtttagatacact 6505218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 26426072 - 26426150
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||  ||||  || ||||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  26426072 gtgtgtgtttggtatgacggtggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtga 26426150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 9893837 - 9893729
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatt 214  Q
    |||||||||||||| ||||  || ||||||||||||||||||||| ||||| ||||||||||||  | |||||||| |  || |||||||| | ||| ||    
T  9893837 tgtgtttggtatggcggtggtgagaattgattttgatagaattgaatttgagagaattgatttttgtcaaaagtgagttagatatgaattgatatatgtt 9893738  T
Q  215 tggatacac 223  Q
    |||||||||    
T  9893737 tggatacac 9893729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 55638718 - 55638790
Alignment:
Q  118 gtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||| |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  55638718 gtttggtttggtggcggcgagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtga 55638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 41866285 - 41866176
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||| ||||||||||||  ||||||| |||  |||||||||| |  ||  ||||||| |||    
T  41866285 tagtgtgtgtttggtttggcggtggcgataattgattttgataaaattgagtttgagggaattgagtttagttaaaagtgagttggatgtgaattgattt 41866186  T
Q  210 atatttggat 219  Q
    || |||||||    
T  41866185 atgtttggat 41866176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 48908402 - 48908294
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||| ||| || |  ||||||||||||| |||  ||||||||||| ||||||||||||| |||||||||| | |||  |||||||| ||||    
T  48908402 gtgtgtgtttggtttggcggcggtgaaaattgattttaatattattgagtttgagagaattgattttggttaaaagtgagtttgatgtgaattgg-ttat 48908304  T
Q  212 atttggatac 221  Q
     |||||||||    
T  48908303 gtttggatac 48908294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 5835878 - 5835799
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    |||||||||||||   || ||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||| |||||    
T  5835878 gtgtgtgtttggttatgttgtgacgaaaattgattttgattgaattgattttg-tagaattgattttgattaaaactgaat 5835799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 54153170 - 54153095
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| | |||| ||| |||||||||| ||| ||||||||||||  |||||||||||| ||||||||||    
T  54153170 tgtgtttggtatagcggtggcgataattgattttaatataattgagtttgagtgaattgattttggttaaaagtga 54153095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 14054979 - 14054857
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    ||||||||||||| ||  ||||||  |||||||||||| | |||||||||||| |||||||| |||  | |||||||| | |||  ||||||| |||||     
T  14054979 tgtgtgtttggtacggcagtgacgggaattgattttgacataattgagtttgaaagaattgagtttagtcaaaagtgagtttgatgtgaattgatttatg 14054880  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    |||||||| |||| | |||||||    
T  14054879 tttggataaacttatataaaagt 14054857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 15603490 - 15603368
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||| ||  ||||  || ||||||||||||||||||||||||||| | |||||||| || | |||||||| | |||  ||||||| |||     
T  15603490 agtgtgtgtttggtttgacggtggggagaattgattttgatagaattgagtttgagataattgattatggtaaaaagtgagtttgatgtgaattgatttg 15603391  T
Q  211 tatttggatacacttgtttaaaa 233  Q
    | ||| |||| ||||| ||||||    
T  15603390 tgtttagatatacttgcttaaaa 15603368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 49136624 - 49136539
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    |||||||| || || |||||||||||| |||||||||| || |||||||||| | |||  ||||||| ||||| ||||||||||||    
T  49136624 aattgattctggtataattgagtttgagagaattgattatggttaaaagtgagtttgatgtgaattgatttatgtttggatacact 49136539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 53532109 - 53532028
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||| ||||||||||  || ||||  || |||||||||||||| |||||||||||||| ||||||||||  ||||||||||    
T  53532109 ttagtatgtgtttggttcggcggtggtgagaattgattttgataaaattgagtttgacataattgattttagttaaaagtga 53532028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 19599487 - 19599531
Alignment:
Q  146 tttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  19599487 tttgatagaattgagtttgagagaattgattttgaataaaagtga 19599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 42944861 - 42944933
Alignment:
Q  118 gtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||| || |||| | | |||| |||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  42944861 gtttggtacggcggtggcaagaatttattttgatagaattgattttgagagaattgattttggttaaaagtga 42944933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 56241847 - 56241902
Alignment:
Q  167 agaattgattttgattaaaagtgaatatgagatgaattggtttatatttggataca 222  Q
    |||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||||    
T  56241847 agaattgattttgattaaaagtgagtttgatatgaattgatttatgtttggataca 56241902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 14076116 - 14076070
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaa 185  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||    
T  14076116 aattgattttgatagaattgagtttgagaaaattgattttggttaaa 14076070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 31520328 - 31520406
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||| | | || ||| ||||||||||| ||||||  ||||||| |||||| |||||| ||||||||||    
T  31520328 gtgtgtgtttggtatagcgatggcgagaattgattttggtagaatgaagtttgaaagaattaattttggttaaaagtga 31520406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 54655361 - 54655295
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgatttt 178  Q
    |||||||||||||| || |||||||| |||||||||||| | |||||||||| | | ||||||||||    
T  54655361 gtgtgtgtttggtacggcggtgacgataattgattttgacataattgagtttaaaataattgatttt 54655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 54735635 - 54735681
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaa 185  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||    
T  54735635 aattgattttgatagaattgagtttgagaaaattgattttggttaaa 54735681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 33574274 - 33574229
Alignment:
Q  145 ttttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||    
T  33574274 ttttgatagaattgagtttgagagaattaattttggttaaaagtga 33574229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 4649885 - 4649953
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttg 179  Q
    ||||||||||||||   |||||||  | |||||||||||||| ||||||||||||  ||||||||||||    
T  4649885 agtgtgtgtttggttctgtggtgagtagaattgattttgataaaattgagtttgagtgaattgattttg 4649953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 16202504 - 16202585
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggataca 222  Q
    |||||||| |||| ||||||| ||||| |||||||||||||| ||||| ||| | ||||| |||||| ||||| ||||||||||    
T  16202504 aattgattctgattgaattgattttgatagaattgattttga-taaaattgattttgaga-gaattgatttatgtttggataca 16202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 45779970 - 45780044
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| ||| || || || ||||||||| ||||||||||||||||| | ||||||||||| | ||||||||    
T  45779970 tgtgtttggtttggcggcgatgagaattgatttcgatagaattgagtttgaga-aattgattttggtaaaaagtga 45780044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 48556655 - 48556616
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgatttt 178  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  48556655 aattgattttgatagaattgagtttgataaaattgatttt 48556616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 54683520 - 54683453
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgatt 176  Q
    ||||||||||||||||   | |||||  ||||||||||||||||||||||| |||||  |||||||||    
T  54683520 ttagtgtgtgtttggttctgcggtgaaaaaaattgattttgatagaattgattttgaatgaattgatt 54683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 2175161 - 2175227
Alignment:
Q  169 aattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||||||||||||||| | |||  ||||||| ||||| ||||||| |||| | ||||||||    
T  2175161 aattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggatgcactcgcttaaaagt 2175227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 38264004 - 38263954
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaa 186  Q
    ||||||||||||||||| |||||||||||| | |||| |||||| ||||||    
T  38264004 gaaaattgattttgatataattgagtttgagaaaattaattttgcttaaaa 38263954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 48407610 - 48407572
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattt 177  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  48407610 aattgattttgatagaattgattgtgacagaattgattt 48407572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 523255 - 523166
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacactt 225  Q
    ||||||||||||||||  ||||||| |||||| |||||||||||   |||||||| |   | |||||||| ||||| ||||||| |||||    
T  523255 gaaaattgattttgatttaattgagcttgacaaaattgattttgggaaaaagtgagttcaatatgaattgatttatgtttggattcactt 523166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 22605745 - 22605786
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  22605745 aattgattttgatagaattgattgggacagaattgattttga 22605786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 26459852 - 26459897
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaat 156  Q
    |||||||||||||||||| |||| ||| |||| |||||||||||||    
T  26459852 agtgtgtgtttggtatggcggtggcgagaattaattttgatagaat 26459897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 28963244 - 28963285
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  28963244 aattgattctgatagaattgattctgacagaattgattttga 28963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 29385432 - 29385473
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| | |||||||||| ||||||||||||||||||||    
T  29385432 aattgattctaatagaattgattttgacagaattgattttga 29385473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 48550424 - 48550497
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacactt 225  Q
    |||||||| ||||| ||||||||||||| |||||||||| |  ||  ||||||| ||||| |||||||| ||||    
T  48550424 agaattgattttgatagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggataaactt 48550497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 51677682 - 51677641
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  51677682 aattgattctgatagaattgattctgacagaattgattttga 51677641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 48550395 - 48550451
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttg 164  Q
    ||||||||||||||||| ||| ||||   | ||||||||||||||||||||| ||||    
T  48550395 cttagtgtgtgtttggtttggcggtgggaagaattgattttgatagaattgattttg 48550451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 13739350 - 13739227
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | |||    
T  13739350 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gatta 13739252  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||||||||||||    
T  13739251 tgtttggatacacttgtttaaaagt 13739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 13744850 - 13744727
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | |||    
T  13744850 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gatta 13744752  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||||||||||||    
T  13744751 tgtttggatacacttgtttaaaagt 13744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 33898960 - 33899074
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||||| | ||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||||| |||    
T  33898960 tagtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtttgatatgaattgattt 33899059  T
Q  210 atatttggatacact 224  Q
    || ||||||||||||    
T  33899060 atgtttggatacact 33899074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 29409205 - 29409329
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||| |||||||||  |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||  ||||||| ||    
T  29409205 ttagtgtgtttttggtatgacggtggcgaaaattgattttaatagaattgagtttgaaagaattgattttgattaaaagtgagtttgatgtgaattgatt 29409304  T
Q  209 tatatttggatacacttgtttaaaa 233  Q
    ||| |||||||||| || |||||||    
T  29409305 tatgtttggatacagttttttaaaa 29409329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 5584001 - 5584084
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||| |||   | |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5584001 tcttagtgtgtgttaggttctgcggtgacgagaattgattttgatagaattgattttgacagaattgattttgactaaaagtga 5584084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 6208019 - 6208098
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| | |||| ||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  6208019 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgattttgagtgaattgattttgattaaaagtga 6208098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 17829957 - 17830033
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||| |  |||  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17829957 gtgtgtttggtatagctgtggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 17830033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 1312395 - 1312474
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   | ||||  ||||||||||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  1312395 agtgtgtgtttggttcagcggtggagaaaattgattttgatagaatcgagtttgataaaattgattttggttaaaagtga 1312474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 10826235 - 10826112
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||| ||| || |  || |||| ||||||||| |||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||| |    
T  10826235 gtgtgtgtttggtttggcggcggtgagaattaattttgataaaattgagtttgagagaattgattttggttaaaagtgagttgaatttgaattgattttt 10826136  T
Q  212 atttggatacacttgtttaaaagt 235  Q
     |||||||| |||| |||||||||    
T  10826135 gtttggatatacttatttaaaagt 10826112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 21254863 - 21254914
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  21254863 aattgagtttgatagaattgagtttgagagaattgaatttgattaaaagtga 21254914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 26274579 - 26274662
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||   | ||  |||| ||||||||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  26274579 tcttagtgtgtgtttggttctgcggcaacgagaattgattttgatagaattgattttgacataattgattctgactaaaagtga 26274662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 29399750 - 29399817
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttg 179  Q
    |||| |||||||| ||| ||||  || ||||||||||||||||||||||||||| |||||||||||||    
T  29399750 gtgtatgtttggtttggcggtggagagaattgattttgatagaattgagtttgatagaattgattttg 29399817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 32599446 - 32599497
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  32599446 aattgattttgatagaattgaatttaagagaattgattttgattaaaagtga 32599497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 16121960 - 16122036
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||| |||||||||| ||||   | |||||||||||||| |||||| ||||| ||||||||||||| ||||||||||    
T  16121960 gtgtctttggtatggcggtggttataattgattttgataaaattgattttgatagaattgattttggttaaaagtga 16122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 178
Target Start/End: Complemental strand, 699673 - 699634
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgatttt 178  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  699673 aattgattttgatagaattgagtttgaaagaattgatttt 699634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 3605708 - 3605786
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   ||||||   |||||||||||||||| |||||| ||||  ||||||||||||||||||||||||    
T  3605708 agtgtgtgtttggttgtgtggtggacaaaattgattttgatataattgattttgt-agaattgattttgattaaaagtga 3605786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 15151489 - 15151540
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  15151489 aattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 15151540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 31132606 - 31132540
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttg 179  Q
    ||||||| | || ||| |||||||| ||||||||||||||||||||||||||| | |||| ||||||    
T  31132606 tgtgtgtatagtttggcggtgacgataattgattttgatagaattgagtttgagataatttattttg 31132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 21456006 - 21455948
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    |||||||  |||||||||||||| |||||||||||  ||||||||||||  ||||||||    
T  21456006 ggtgacgggaattgattttgatataattgagtttgtaagaattgattttagttaaaagt 21455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 10683884 - 10683843
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||||||||| |||||| | ||||||||||||||||||    
T  10683884 aattgattttgatataattgattctgacagaattgattttga 10683843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 23358411 - 23358288
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||||| || ||| |||||||||  |||||||||||||||| |||||||||||||||||||||||| | ||||||||| | |||||    
T  23358411 agtgtgtgtttggtatggtgttggcgagaattgattta-atagaattgagtttgagagaattgattttgattaaaagtgagtttgagatgaaatagttta 23358313  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||||||||||||    
T  23358312 tgtttggatacacttgtttaaaagt 23358288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 36548362 - 36548243
Alignment:
Q  102 aaatttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatga 201  Q
    ||||| || |||||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||  |||    
T  36548362 aaattactaagtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtctgatgtga 36548263  T
Q  202 attggtttatatttggatac 221  Q
    |||| ||||| |||||||||    
T  36548262 attgatttatgtttggatac 36548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 2215408 - 2215284
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||| | |||   || |||||||||||||||||||||| |||| ||||||||||||| |||||||||| | |||| ||||||| ||    
T  2215408 ttagtgtgtgtttggtatagcggttgtgagaattgattttgatagaattgagcttgagagaattgattttggttaaaagtgagtttgaggtgaattgatt 2215309  T
Q  209 tatatttggatacacttgtttaaaa 233  Q
    ||| |||||||||||||||||||||    
T  2215308 tatgtttggatacacttgtttaaaa 2215284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 7472629 - 7472751
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||||  |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||  |||||| | ||||    
T  7472629 gtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgatgtgaatt-gattat 7472727  T
Q  212 atttggatacacttgtttaaaagt 235  Q
     ||||||||||||| |||||||||    
T  7472728 gtttggatacacttatttaaaagt 7472751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 31562640 - 31562735
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    ||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||| |||||||    
T  31562640 tagtgcgtgtttggtatggtggtggcgagaattgattttgataaaattgagtttgagagaattgattttggttaaaagtgaatttgaggtgaattg 31562735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 44619043 - 44619137
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaa 233  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||  |||||| ||||| |||||||||||||||||||||    
T  44619043 aattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggggaattgatttatgtttggatacacttgtttaaaa 44619137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 235
Target Start/End: Original strand, 9988454 - 9988579
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||| ||| ||||  || ||||||||||||||||||||||||||| ||||||||||||  |||||||||| |  ||  ||||||| |||    
T  9988454 tagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttggatgtgaattgattt 9988553  T
Q  210 atatttggatacacttgtttaaaagt 235  Q
    || ||||||||||||| |||||||||    
T  9988554 atgtttggatacacttatttaaaagt 9988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 1944993 - 1945117
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| || |  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||||    
T  1944993 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 1945092  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||  ||||||||    
T  1945093 tgtttggatacactttattaaaagt 1945117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 2213773 - 2213677
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||  ||||||| ||| | ||||||||||||| |||||||||    
T  2213773 aattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgatgtgaattgatttgtctttggatacacttatttaaaagt 2213677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 31224833 - 31224725
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| |  ||  ||||||| |||||    
T  31224833 gtgtgtatttggtttggcggtgacgaaaattgattttgatagaattgagtttgaaagaattgattttagttaaaagtgagttggatgtgaattgatttat 31224734  T
Q  212 atttggata 220  Q
     ||||||||    
T  31224733 gtttggata 31224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 8170466 - 8170387
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||| || |||| ||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8170466 agtgtgtgtttggtagggcggtggcgagaattaattttgatagaattgagtttgagagaattgattttgattaaaagtga 8170387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 32502137 - 32502060
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| |||   |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  32502137 tgtgtgtttggtatggcggtcgtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 32502060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 34433263 - 34433339
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||   | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34433263 gtgtgtttggttcagcggtgaagagaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 34433339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 7296311 - 7296196
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||  |||||| | ||| |||||| ||||||| |||||||||||| ||||||||||||| |||||| ||| | |||  ||||||| ||    
T  7296311 ttagtgtgtgtttggattggtggcgccgataattgactttgatataattgagtttgagagaattgattttggttaaaaatgagtttgatgtgaattgatt 7296212  T
Q  209 tatatttggatacact 224  Q
    ||| ||||||||||||    
T  7296211 tatgtttggatacact 7296196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 39141420 - 39141545
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattgg 206  Q
    |||| |||||||||||||  || |||| ||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||| |  || ||||||| |    
T  39141420 tcttcgtgtgtgtttggttgggcggtggcgagaattgattttgatataattgagtttgaaagaattgattttggttaaaagtgagttggatatgaatt-g 39141518  T
Q  207 tttatatttggatacacttgtttaaaa 233  Q
     |||| ||||||||||||  |||||||    
T  39141519 attatgtttggatacactcatttaaaa 39141545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 26207884 - 26207997
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| | ||||| ||||||| ||||| |||||||| | |  ||  ||||||| |||||    
T  26207884 gtgtgtgtttggtatgacggtgacgaaaattgattttgatagaattaattttgagagaattggttttggttaaaagtcagttggatgtgaattgatttat 26207983  T
Q  212 atttggatacactt 225  Q
     ||| |||||||||    
T  26207984 gttttgatacactt 26207997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 42089480 - 42089561
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||| | ||| ||||| |||||||||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  42089480 ttagtgtgtgtttgatttggcggtgatgaaaattgattttgatagaattaagttcaagagaattgattttgattaaaagtga 42089561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 2213659 - 2213547
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| | |||||||| |   |  ||||||| |||||    
T  2213659 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 2213560  T
Q  212 atttggatacact 224  Q
     ||||||||||||    
T  2213559 gtttggatacact 2213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 42515936 - 42516009
Alignment:
Q  117 tgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| ||||  ||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||    
T  42515936 tgtttggtatggcggtggagaaaattgattttgatataattgagtttgagagaattgattttagttaaaagtga 42516009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 45714650 - 45714735
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| ||| |  ||  ||||||| ||||| ||||||||||||    
T  45714650 aattgattttgatataattgagtttgagagaattgattttgattaaaaatgagttcgatgtgaattgatttatgtttggatacact 45714735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 28127242 - 28127354
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||| ||||||| ||||||||||||| | |||||||| |   |  ||||||| |||||    
T  28127242 gtgtgtgtttggtatagcggtggggagaattgattttgatagaatttagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 28127341  T
Q  212 atttggatacact 224  Q
     ||||||||||||    
T  28127342 gtttggatacact 28127354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 36312431 - 36312351
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||| || |  || ||||||||||||||||||| | ||||| ||||||||||||| ||||||||||    
T  36312431 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtga 36312351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 5916196 - 5916275
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||| || |  || ||||||||||||||||||| | ||||| ||||||||||||| ||||||||||    
T  5916196 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtga 5916275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 12111027 - 12110949
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   | |||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  12111027 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtga 12110949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 14821312 - 14821237
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| | |||||||| |||| ||||||||||||||||||||||  |||||||||||  ||||||||||    
T  14821312 tgtgtttggtatagcggtgacgataattaattttgatagaattgagtttgagtgaattgattttagttaaaagtga 14821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 25747864 - 25747915
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  25747864 aattgagtttgatagaattgagtttgagagaattgattttgattaaaagtga 25747915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 30007509 - 30007586
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||| ||||||||  |||  || ||||||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  30007509 tgtgtgtatggtatggctgtggggagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtga 30007586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 41580692 - 41580776
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacac 223  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||||| | |||  | ||||  ||||| |||||||||||    
T  41580692 aattgattttgatcgaattgagtttgagagaattgattttggttaaaagtgagtttgatgtaaattaatttatgtttggatacac 41580776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 8041406 - 8041351
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    |||||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  8041406 aaaattgtgtttgatagaattgagtttgagagaattgattttgaataaaagtgaat 8041351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 7295300 - 7295414
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||  ||  || | ||| |||| |||||||||||||||||||||| |||||||||| || |||||| ||| | |||  | ||||| ||    
T  7295300 ttagtgtgtgtttggattgacggcgtcgataattaattttgatagaattgagtttgagagaattgattctggttaaaaatgagtttgacgtaaattgatt 7295399  T
Q  209 tatatttggatacac 223  Q
    ||| |||||||||||    
T  7295400 tatgtttggatacac 7295414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 28261420 - 28261338
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatac 221  Q
    |||| ||||| ||| |||||||||||| ||||||||||||| |||||||||| |  ||  ||||||| |||||||||||||||    
T  28261420 aattaattttaatacaattgagtttgagagaattgattttgcttaaaagtgagttggatgtgaattgatttatatttggatac 28261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 3854056 - 3853975
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||   | |||  ||| |||||| |||||| ||||||| ||||| ||||||||||||||||||||||||    
T  3854056 ttagtgtgtgtttggttgtgcggtagcgagaattgagtttgatggaattgattttgatagaattgattttgattaaaagtga 3853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 38600425 - 38600513
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgt 227  Q
    |||| |||||||| ||||| ||||||| ||||||||||||| |||||||||| | |||  | ||||| ||||| |||| ||||||||||    
T  38600425 aattaattttgatcgaattaagtttgagagaattgattttggttaaaagtgagtttgatgtaaattgatttatgtttgaatacacttgt 38600513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 16467212 - 16467161
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  16467212 aattgattttgatagaattgattttggcataattgattttggttaaaagtga 16467161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 23267346 - 23267397
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  23267346 aattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 23267397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 27911551 - 27911492
Alignment:
Q  105 tttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttg 164  Q
    ||||||||||||||||||||  || || | ||| ||||||||||||||||||||||||||    
T  27911551 tttcttagtgtgtgtttggttcggcggcggcgataattgattttgatagaattgagtttg 27911492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 28641799 - 28641690
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||| ||| | ||   |||||||||||| || ||||||| | ||| ||||||||||||| ||||| |||| |  ||  ||||||| |    
T  28641799 cttagtgtgtgtttggtttggcgatggataaaattgattttaattgaattgattctgagagaattgattttggttaaatgtgagttggatgtgaattgat 28641700  T
Q  208 ttatatttgg 217  Q
    ||||||||||    
T  28641699 ttatatttgg 28641690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 34997215 - 34997271
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||  |||||| |||||    
T  34997215 gaaaattgattttgataaaatttagtttgacaaaattgatttttgttaaaaatgaat 34997271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 18511228 - 18511177
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||| |||||| ||||| | ||||||||||| ||||||||||    
T  18511228 aattgattttgataaaattgattttgatataattgattttggttaaaagtga 18511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 26806210 - 26806288
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   | |||||| | ||||||||||| | ||||| | ||| ||||||||||||||||||||||||||    
T  26806210 agtgtgtgtttggttacgcggtgacaataattgattttggttgaattaatttt-acagaattgattttgattaaaagtga 26806288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 3602415 - 3602493
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||   | ||||| ||||||||||||| |  ||||||| ||||| |||||||||||||  |||||||||    
T  3602415 gtgtgtgtttggttctgcggtgatgaaaattgatttttactgaattgattttgatagaattgattttgtctaaaagtga 3602493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 32496583 - 32496624
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  32496583 aattgattctgatagaattgattatgacagaattgattttga 32496624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 43436264 - 43436305
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgat 151  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  43436264 tagtgtgtgtttggtatggcggtggcgagaattgattttgat 43436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 2225 - 2348
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    |||| |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| | |||| ||||||| |||||    
T  2225 gtgtctgtttggtatggcggtggcgaaaattgattttgacagaattgagtttgacataattgattttggttaaaagtgagtttgaggtgaattgatttat 2324  T
Q  212 atttggatacacttgtttaaaagt 235  Q
     |||||| ||||||||||||||||    
T  2325 gtttggacacacttgtttaaaagt 2348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 42318473 - 42318351
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | ||||    
T  42318473 gtgtgtgtttggtatagcggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gattat 42318375  T
Q  212 atttggatacacttgtttaaaagt 235  Q
     ||||||||||||||||| |||||    
T  42318374 gtttggatacacttgtttgaaagt 42318351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 38125398 - 38125521
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||||  | |||| |||||| | |||    
T  38125398 agtgtgtgtttggtatggcggtgacgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtgggtttgaggtgaatt-gatta 38125496  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | ||||||||||||||||| |||||    
T  38125497 tgtttggatacacttgtttgaaagt 38125521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 10334285 - 10334169
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| | |   | |||||||| ||    
T  10334285 ttagtgtgtgtttgatatggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtcagttgaatatgaattgatt 10334186  T
Q  209 tatatttggatacactt 225  Q
    ||| |||||||||||||    
T  10334185 tatgtttggatacactt 10334169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 50664906 - 50664791
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |   |  ||||||| |    
T  50664906 cttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgat 50664807  T
Q  208 ttatatttggatacac 223  Q
    |||| |||||||||||    
T  50664806 ttatgtttggatacac 50664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 23496466 - 23496383
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||||| || || || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  23496466 tcttagtgtgtgtttggtatggcggcgaggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 23496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 48189398 - 48189477
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48189398 agtgtgtgtttggtagggcggtggcgataattgattttgatagaattgagtttgagagaattgattttgattaaaagtga 48189477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 4984728 - 4984602
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| ||||  || |||||||||||||| |||||| ||||| | ||||||||||| |||||||||| |  ||  ||||||| ||    
T  4984728 ttagtgtgtgtttggtatggcggtggggagaattgattttgatataattgaatttgagaaaattgattttggttaaaagtgagttagatgtgaattgatt 4984629  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| |||||||||||| ||||||||||    
T  4984628 tatgtttggatacactcgtttaaaagt 4984602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 30811487 - 30811567
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| || |||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  30811487 tagtgtgtgtttggtagggcggtgacgagaattgattttgatataattgaatttgagagaattgattttgattaaaagtga 30811567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 42475855 - 42475775
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||| ||||||| ||| |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42475855 tagtgtgcgtttggtttggcggtgacgagaattgatttttatagaattgagtttgagagaattgattttgattaaaagtga 42475775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 35425477 - 35425399
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| || || |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35425477 agtgtgtgtttg-tagggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtga 35425399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 52966764 - 52966871
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| | |||  ||||||| |||    
T  52966764 tagtgtgtgtttggtttggaggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtgactttgatgtgaattgattt 52966863  T
Q  210 atatttgg 217  Q
    || |||||    
T  52966864 atgtttgg 52966871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 38172263 - 38172377
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||| ||| ||||  || |||||||||| |||||||||||||||| ||||||||||||| |||||||||| |  ||  ||||||| ||||    
T  38172263 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagtgggatgtgaattgattta 38172362  T
Q  211 tatttggatacactt 225  Q
    | |||||||||||||    
T  38172363 tgtttggatacactt 38172377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 35930855 - 35930770
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| | ||| |||||||| |||||  |||||||||||    
T  35930855 aattgattttgatagaattgagtttgagagaattgatttttattaaaagtgagtttgatatgaattgatttatgcttggatacact 35930770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 44939370 - 44939451
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||| | |||| ||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  44939370 ttagtgtgtgtttggtatagcggtggcgataattgattttgatagaattgaatttgagtgaattgattttgattaaaagtga 44939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 220
Target Start/End: Original strand, 10853224 - 10853332
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | | | || ||||| |||||    
T  10853224 gtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttaatataaattgatttat 10853323  T
Q  212 atttggata 220  Q
     ||||||||    
T  10853324 gtttggata 10853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 15511332 - 15511411
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  15511332 agtgtgtgtttggtatggcggtggcgataattgattttgatagaacggagtttgaaagaattgattttggttaaaagtga 15511411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 55154646 - 55154567
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  55154646 agtgtgtgtttggtatggcagtggcgagaattgattttgatagaattgagtttgagagaattgattttagttaaaagtga 55154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 53075051 - 53074935
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattgg 206  Q
    |||| ||||||||||| || || || |  ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| | |||| |||||| |    
T  53075051 tcttcgtgtgtgtttgatacggcggcggtgaaaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-g 53074953  T
Q  207 tttatatttggatacact 224  Q
     |||| ||||||||||||    
T  53074952 attatgtttggatacact 53074935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 26519808 - 26519696
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| | |||||||| |   |  ||||||| |||||    
T  26519808 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgatttat 26519709  T
Q  212 atttggatacact 224  Q
     ||||||||||||    
T  26519708 gtttggatacact 26519696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 3348389 - 3348263
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    |||||||||||||| || | |||| ||| ||||||||||||||||||||||||| |  |||||||||||| ||| |||||| |  ||  | ||||| |||    
T  3348389 tagtgtgtgtttggcatagcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttagaagtgagttggatgtaaattgattt 3348290  T
Q  210 atatttggatacacttgtttaaaagta 236  Q
    || |||||||||||||  |||||||||    
T  3348289 atgtttggatacacttccttaaaagta 3348263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 19877540 - 19877483
Alignment:
Q  133 gacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19877540 gacgaaaatttattttgatagaattgagtttgaaagaattgattttggttaaaagtga 19877483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 38340949 - 38340841
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||||| | ||  || ||||||||||||||||||  ||||||| ||||||||||||| |||||||||| |  ||  ||||||| |||||    
T  38340949 gtgtgtgtttggtatggcgttggtgagaattgattttgatagaatgaagtttgaaagaattgattttggttaaaagtgagttggatgtgaattgatttat 38340850  T
Q  212 atttggata 220  Q
     ||||||||    
T  38340849 gtttggata 38340841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 52813363 - 52813281
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||   | |||||  |||||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  52813363 cttagtgtgtgtttggttctgcggtgagtaaaattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 52813281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 23207043 - 23207148
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgttt 229  Q
    |||| |||||||||||||||||| |||||| ||||  | ||||||||||| |||||| ||| | |||  ||||||| ||||| ||||||||||||| |||    
T  23207043 ggtggcgaaaattgattttgatataattgattttgttataattgattttggttaaaaatgagtttgatgtgaattgatttatgtttggatacactttttt 23207142  T
Q  230 aaaagt 235  Q
    | ||||    
T  23207143 acaagt 23207148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 53179958 - 53179869
Alignment:
Q  146 tttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||||||||||| | | ||||||||||| |||||||||| | |||  | ||||| ||||| ||||||||||||| |||||||||    
T  53179958 tttgatagaattgagttttatataattgattttggttaaaagtgagtttgatgtaaattgatttatgtttggatacacttttttaaaagt 53179869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 8424714 - 8424765
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  8424714 aattgaatttgatagaattgagtttgagagaattgattttggttaaaagtga 8424765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 34561228 - 34561174
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  34561228 gaaaattgattttgatagaattaagtttgataaaattgattttggttaaaagtga 34561174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 21225133 - 21225012
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||| | | || | ||| ||||||| |  |||||||||||||||| ||||||||||||| |||||||||| | |||  | ||||| | |||     
T  21225133 tgtgtgtttggtttagcggcggcgagaattgatctctatagaattgagtttgagagaattgattttggttaaaagtgagtttgatgtaaattgatatatg 21225034  T
Q  213 tttggatacacttgtttaaaag 234  Q
    |||||||||||||  |||||||    
T  21225033 tttggatacactttcttaaaag 21225012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 44224867 - 44224794
Alignment:
Q  151 tagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacact 224  Q
    ||||||||||||||| | |||||||| || |||||||||| | ||| |||||||| ||||| ||||||||||||    
T  44224867 tagaattgagtttgagataattgattatggttaaaagtgagtttgatatgaattgatttatgtttggatacact 44224794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 14651086 - 14651137
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| ||| |||||| ||||| ||||||||||||||||||||||||    
T  14651086 aattgattttaataaaattgattttgatagaattgattttgattaaaagtga 14651137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 31084311 - 31084238
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacactt 225  Q
    |||||||| ||||| |||||||||||||||||||||||| |   |  ||||||| ||||| |||||||||||||    
T  31084311 agaattgattttgaaagaattgattttgattaaaagtgagttgaatgtgaattgatttatgtttggatacactt 31084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 48253879 - 48253920
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  48253879 aattgattttgatagaattgattctgacagaattgattttga 48253920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 49526653 - 49526706
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    |||||| ||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  49526653 aattgagtttgatgaaattgattttgatagaattgattttgattaaaagtgaat 49526706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 20813290 - 20813167
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    ||||||||||||||||   ||||  || ||||||||||||||||| ||||||||| |||||||  |||| |||||||||| |  ||  ||||||| |||     
T  20813290 agtgtgtgtttggtatatcggtggagagaattgattttgatagaa-tgagtttgagagaattgtgtttggttaaaagtgagttggatttgaattgatttt 20813192  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||| |||| || ||||||    
T  20813191 tgtttggatatacttattcaaaagt 20813167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 29716674 - 29716721
Alignment:
Q  143 gattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||||||    
T  29716674 gattttgataaaattgaatttgagagaattgattttggttaaaagtga 29716721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 41459347 - 41459292
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttg 164  Q
    ||||||||||||||||    ||||||||||||||||||||||| ||||||| ||||    
T  41459347 ttagtgtgtgtttggttctatggtgacgaaaattgattttgattgaattgactttg 41459292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 16246054 - 16246129
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| ||| |||  ||| ||||||| || |||||||||||||||  ||||||||||||  ||||||||||    
T  16246054 tgtgtgtttggtttggcggtagcgagaattgatattaatagaattgagtttg--agaattgattttagttaaaagtga 16246129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 31084341 - 31084283
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttga 165  Q
    |||||| ||||||||||| ||| |||| ||| |||||||||||| |||||||| |||||    
T  31084341 tcttagggtgtgtttggtttggcggtggcgagaattgattttgaaagaattgattttga 31084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 31618368 - 31618422
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttga 165  Q
    |||||||||||||||||  ||||   | |||||||||||||||||||||||||||    
T  31618368 agtgtgtgtttggtatgacggtgggaagaattgattttgatagaattgagtttga 31618422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 35930929 - 35930879
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttga 165  Q
    ||||||||||||  |||||  || |||||||||||||||||||||||||||    
T  35930929 tgtgtttggtatactggtggtgagaattgattttgatagaattgagtttga 35930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 45423728 - 45423833
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    |||||||||||   |||||| |||||||||||||||  | |||||| | ||| |||||||||||||  ||||||||| | |||  | ||||||||||| |    
T  45423728 gtgtgtttggttctgtggtggcgaaaattgattttggcataattgattctgatagaattgattttgcctaaaagtgagt-tgaacttaattggtttatgt 45423826  T
Q  214 ttggata 220  Q
    |||||||    
T  45423827 ttggata 45423833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 53568051 - 53567998
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||  ||||||| ||| ||| ||||||||||||||||||||||    
T  53568051 gaaaattgattttgagtgaattgatttt-acaaaattgattttgattaaaagtga 53567998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 5045970 - 5046035
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgatttt 178  Q
    |||||||||||| | |||||| || |||||| ||||||| ||||||| ||| ||| ||||||||||    
T  5045970 tgtgtgtttggttttgtggtggcggaaattgtttttgattgaattgatttttacaaaattgatttt 5046035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 45488485 - 45488526
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| ||||| ||||||||||||||    
T  45488485 aattgattatgatagaattgattttgaaagaattgattttga 45488526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 32454697 - 32454572
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgat-agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||| | |||| |||||| | |    
T  32454697 tagtgtgtgtttggtatggcggtggcgagaattgattttgattagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaatt-gat 32454599  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| |||||||||||||||||||||||    
T  32454598 tatgtttggatacacttgtttaaaagt 32454572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 40885372 - 40885246
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| ||||  |||||||||||||| ||||||||||||| | |||||||||||||||||||||||| |  ||  ||||||| ||    
T  40885372 ttagtgtgtgtttggtatggcggtggtgaaaattgattttgttagaattgagtttaagagaattgattttgattaaaagtgagttggatgtgaattgatt 40885273  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| |||||| ||||||||||||||||    
T  40885272 tatgtttggacacacttgtttaaaagt 40885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 41740574 - 41740670
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||| | |||||||||||||||||| |||| ||||||||||||||||||    
T  41740574 aattgattttgatagaattgagtttgagagaattgattttgattataggtgagtttgagatgaattggtttatgtttgaatacacttgtttaaaagt 41740670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 39987948 - 39988044
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| ||||||| ||||| ||||||||||||| |||||||||    
T  39987948 aattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttggatacacttatttaaaagt 39988044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 8049001 - 8049128
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    |||||||||| |||||||| | || |  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| | |||| | ||||| |    
T  8049001 cttagtgtgtctttggtatagcggcggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtttgaggttaattgat 8049100  T
Q  208 ttatatttggatacacttgtttaaaagt 235  Q
    |||| ||||||||||||| |||||||||    
T  8049101 ttatgtttggatacacttatttaaaagt 8049128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 5710339 - 5710449
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||| | ||   ||||||| ||||    
T  5710339 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtttggtgtgaattgcttta 5710438  T
Q  211 tatttggatac 221  Q
    | |||||||||    
T  5710439 tgtttggatac 5710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 235
Target Start/End: Original strand, 40495310 - 40495435
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||||||| || |   | ||||||||||||||||||||||||||| | ||||||||||| |||||||||| | |||  | ||||| |||    
T  40495310 tagtgtgtgtttggtatggcggcgggaagaattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtaaattgattt 40495409  T
Q  210 atatttggatacacttgtttaaaagt 235  Q
    || ||||||||||||| |||||||||    
T  40495410 atgtttggatacacttttttaaaagt 40495435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 41835050 - 41834937
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||||| ||||  || ||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |  ||  ||||||| |||||    
T  41835050 gtgtgtgtttggtatggcggtggggagaattgattttgatagaattcagtttgagagaattgattttggttaaaagtgagttggaagtgaattgatttat 41834951  T
Q  212 atttggatacactt 225  Q
     |||||||||||||    
T  41834950 gtttggatacactt 41834937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 10058235 - 10058119
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||||||| |||||| ||||  || |||||||||||||| |||||||||||| || |||||||||| |||||||||| |  || |||||||| ||    
T  10058235 ttagtgtgtgtttagtatggcggtggggagaattgattttgatataattgagtttgagagtattgattttggttaaaagtgagttggaaatgaattgatt 10058136  T
Q  209 tatatttggatacactt 225  Q
    ||| |||||||||||||    
T  10058135 tatgtttggatacactt 10058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 32030876 - 32030796
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    ||||||||||||||||||| ||||||  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  32030876 cttagtgtgtgtttggtatagtggtggagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagt 32030796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 24045991 - 24045881
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||| |||||||||||||| ||||  || ||||||||||||||||||||| ||||| ||||||||||||| |||||||||| | |||  ||||||| ||    
T  24045991 ttagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtgagtctgatgtgaattgatt 24045892  T
Q  209 tatatttggat 219  Q
    ||| |||||||    
T  24045891 tatgtttggat 24045881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 3668012 - 3667900
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||| ||||||  || ||||||||||||||||||||||||||| ||||||||||||| | |||||||| |   |  ||||||| |||||    
T  3668012 gtgtgtgtttggtatagtggtggagagaattgattttgatagaattgagtttgagagaattgattttgttaaaaagtgagttgaatgtgaattgatttat 3667913  T
Q  212 atttggatacact 224  Q
     ||||||||||||    
T  3667912 gtttggatacact 3667900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 16158446 - 16158542
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||||||||| | |||  ||||||  ||||||||||||| ||||| |||||||||    
T  16158446 aattgatttttatagatttgagtttgaaagaattgattttgattaaaagtgagtttgatgtgaattaatttatatttggatgcacttttttaaaagt 16158542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 22482348 - 22482224
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| || |  || ||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |   |  ||||||| ||||    
T  22482348 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 22482249  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||  ||||||||    
T  22482248 tgtttggatacactttattaaaagt 22482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 13253038 - 13253159
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    ||||||||||||  || |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |   | ||||||| | ||||     
T  13253038 tgtgtgtttggttgggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttgaatatgaatt-gattatg 13253136  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    ||||||||||||  |||||||||    
T  13253137 tttggatacactcatttaaaagt 13253159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 35760348 - 35760235
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||| | ||||  || ||||||||||||||||||||||||||| ||||||||||||| | |||||||| |   |  ||||||| ||||    
T  35760348 agtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttgaatgtgaattgattta 35760249  T
Q  211 tatttggatacact 224  Q
    | ||||||||||||    
T  35760248 tgtttggatacact 35760235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 9275439 - 9275551
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||| ||| ||||  ||||||||||||||||| |||||||||| | ||||||||||||| |||||||||| |  ||  | ||||| |||||     
T  9275439 tgtgtgtttggtttggcggtggggaaaattgattttgataaaattgagtttaagagaattgattttggttaaaagtgagttagatgttaattgatttatg 9275538  T
Q  213 tttggatacactt 225  Q
    |||||||||||||    
T  9275539 tttggatacactt 9275551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 2430250 - 2430329
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||| |||||||||| |||| ||| |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  2430250 agtgtgtatttggtatggcggtggcgagaattcattttgatggaattgagtttgagagaattgattttggttaaaagtga 2430329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 7715095 - 7715020
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||| |||||| ||||   ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  7715095 tgtgttttgtatggcggtggtaaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 7715020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 7385883 - 7386009
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||||||| |||| | || |  || ||||||||||||||||||| ||||| | ||||||||||||| |||||||||  | |||| ||||||| ||    
T  7385883 ttagtgtgtgtttagtatagcggcggtgagaattgattttgatagaattaagttttagagaattgattttggttaaaagtgggtttgaggtgaattgatt 7385982  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| |||  |||||||| |||||||||    
T  7385983 tatgtttaaatacacttatttaaaagt 7386009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 33953856 - 33953934
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||  |||  |||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||    
T  33953856 gtgtgtgtttggtatggcagtggtgaaaattgattttggtagaattgagtttgagagaattgattttatttaaaagtga 33953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 3060205 - 3060286
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggata 220  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| | | | |||||||  ||||| ||||||||    
T  3060205 aattgattttgatagaattaagtttgagagaattgattttgattaaaagtgagttttatatgaattaatttatgtttggata 3060286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 42146466 - 42146343
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||  || |  || ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |  || ||||||| | |||    
T  42146466 agtgtgtgtttggtatgacggcggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtgagttagatatgaatt-gatta 42146368  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | ||||||||| |||  ||||||||    
T  42146367 tgtttggatacgcttaattaaaagt 42146343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 40791021 - 40791146
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    ||||||||||||||||||   || |  || ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |  || ||||||| | |    
T  40791021 ttagtgtgtgtttggtatcacggcggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtgagttagatatgaatt-gat 40791119  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| ||||||||| |||  ||||||||    
T  40791120 tatgtttggatacgcttaattaaaagt 40791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 4292280 - 4292233
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaa 186  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  4292280 aattgattttgatagaattaagtttgagagaattgattttgattaaaa 4292233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 7178936 - 7178857
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||  || | ||| || |||||| |||||||||||||||||||| |||||| ||||||| |||||||||    
T  7178936 agtgtgtgtttggttcggcgatgatgataattgagtttgatagaattgagtttgagagaattaattttgactaaaagtga 7178857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 34106926 - 34106979
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  34106926 aaaattgattttgatagaattgagtttaaaagaattgtttttggttaaaagtga 34106979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 35847841 - 35847922
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||   | |||||  | |||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  35847841 ttagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 35847922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 16843660 - 16843607
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    |||||||||||||| ||||||||||||  |||| ||||||| ||||||||||||    
T  16843660 aattgattttgatataattgagtttgaacgaatagattttggttaaaagtgaat 16843607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 2694732 - 2694792
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||| |||||||||||  |||||||| |||||  |||||||||||| ||||||||||    
T  2694732 ggtgacgagaattgattttgtcagaattgattttgattgaattgattttggttaaaagtga 2694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 19203957 - 19204036
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||   | |||||||| ||||||||||| ||||||||| ||| ||| |||||||| ||| |||||||||    
T  19203957 tagtgtgtgtttggttatgcggtgacgagaattgattttggtagaattga-ttttacataattgattatgaataaaagtga 19204036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 23914235 - 23914319
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacac 223  Q
    ||||||||||||||||||||| ||||| |||||||||| |  |||||| ||| |  || |||||||| ||||  |||||||||||    
T  23914235 aattgattttgatagaattgattttgagagaattgattatacttaaaattgagttggatatgaattgatttacgtttggatacac 23914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 3747540 - 3747623
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||   | |||||  ||||||||||||||||||||||| | |||  |||||||||  ||| ||||||||    
T  3747540 tcttagtgtgtgtttggttatgcggtgataaaaattgattttgatagaattgattgtgaatgaattgattcggatcaaaagtga 3747623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 4295647 - 4295606
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| | ||||| ||||||||||||    
T  4295647 aattgattttgatagaattgattctgacataattgattttga 4295606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 41741604 - 41741645
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| ||||| ||||||||||||||    
T  41741604 aattgattctgatagaattgattttgatagaattgattttga 41741645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 4295667 - 4295635
Alignment:
Q  149 gatagaattgagtttgacagaattgattttgat 181  Q
    ||||||||||| |||||||||||||||||||||    
T  4295667 gatagaattgattttgacagaattgattttgat 4295635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 27021256 - 27021212
Alignment:
Q  142 tgattttgatagaattgagtttgacagaattgattttgattaaaa 186  Q
    ||||||||||| |||||||||||| | ||||||||||| ||||||    
T  27021256 tgattttgatataattgagtttgagaaaattgattttggttaaaa 27021212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 47123557 - 47123431
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |  ||  ||||||| ||    
T  47123557 ttagtgtgtgtttggtatggcggtggcaaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttagatgtgaattgatt 47123458  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    | | |||||||||||||  ||||||||    
T  47123457 tttgtttggatacacttcgttaaaagt 47123431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 26058415 - 26058285
Alignment:
Q  106 ttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||| | ||||||||||||||||||||||||||  ||  | |||||    
T  26058415 ttcttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgaattagatgtaaattg 26058316  T
Q  206 gtttatatttggatacacttgtttaaaagta 236  Q
     ||||| ||||||| ||||  ||||||||||    
T  26058315 atttatgtttggatgcactcatttaaaagta 26058285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 35536242 - 35536117
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||||||| ||||| ||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||| | |||  |||||||| |    
T  35536242 ttagtgtgtgtttggtatggcggtgatgaaaattaattttaatagaattgagtttgagagaattaattttgattaaaagtgactttgacgtgaattgg-t 35536144  T
Q  209 tatatttggatacacttgtttaaaagt 235  Q
    ||| ||| |||||||| ||||||||||    
T  35536143 tatgtttagatacactcgtttaaaagt 35536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 10470762 - 10470679
Alignment:
Q  107 tcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10470762 tcttagtgtgtgtttggtagggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtga 10470679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 42850176 - 42850300
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |  |||||||||||| |||||||||| |  ||  ||||||| ||||    
T  42850176 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttggatgtgaattgattta 42850275  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||  ||||||||    
T  42850276 tgtttggatacacttccttaaaagt 42850300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 1199996 - 1199882
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||| |||||| |||||||||| |   |  ||||||| ||||    
T  1199996 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttgaatgtgaattgattta 1199897  T
Q  211 tatttggatacactt 225  Q
    | |||||||||||||    
T  1199896 tgtttggatacactt 1199882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 50977297 - 50977407
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||| |||||||| ||||||||||||| |||||||||| | ||   ||||||| ||||    
T  50977297 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtttggtgtgaattgtttta 50977396  T
Q  211 tatttggatac 221  Q
    | |||||||||    
T  50977397 tgtttggatac 50977407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 11023289 - 11023366
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11023289 tgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 11023366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 13056168 - 13056087
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  13056168 ttagtgtgtgtttggtatggcggtggcgataattgattttgatagaatggagtttgaaagaattgattttggttaaaagtga 13056087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 291730 - 291798
Alignment:
Q  167 agaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  291730 agaattgattttgattaaaagtgagtttgagatgaattggtttatgtttggatacacttgtttaaaagt 291798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 40229433 - 40229541
Alignment:
Q  117 tgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttg 216  Q
    |||||||||||  ||||| |||||||||||||||||||||||| ||||   |||||||||||| |||||||||| | |||| ||||||| ||||| ||||    
T  40229433 tgtttggtatgacggtgatgaaaattgattttgatagaattgattttgttggaattgattttggttaaaagtgagtttgaggtgaattgatttatgtttg 40229532  T
Q  217 gatacactt 225  Q
    |||||||||    
T  40229533 gatacactt 40229541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 48511077 - 48510953
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| || | ||| ||||||||||||| ||||||||||||| | ||||||||||| |||||||||| |   |  ||||||| ||||    
T  48511077 agtgtgtgtttggtatggcggcggcgagaattgattttgattgaattgagtttgagataattgattttggttaaaagtgagttgaatgtgaattgattta 48510978  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||| ||||||||    
T  48510977 tgtttggatacacttgcttaaaagt 48510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 35569156 - 35569283
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||||||| || |  || ||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |   |  ||||||| |    
T  35569156 cttagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgat 35569255  T
Q  208 ttatatttggatacacttgtttaaaagt 235  Q
    |||| |||||||||||||  ||||||||    
T  35569256 ttatgtttggatacactttattaaaagt 35569283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 27801608 - 27801734
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||| |  ||  | ||||| |||    
T  27801608 tagtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgattt 27801707  T
Q  210 atatttggatacacttgtttaaaagta 236  Q
    || ||||||| ||||  ||||||||||    
T  27801708 atgtttggatgcactcatttaaaagta 27801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 225
Target Start/End: Complemental strand, 31223543 - 31223429
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||| ||| ||||  || |||||||||| |||||||||||||||| ||||||||||||| |||||||||| |  ||  ||||||| ||||    
T  31223543 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgattta 31223444  T
Q  211 tatttggatacactt 225  Q
    | |||||||||||||    
T  31223443 tgtttggatacactt 31223429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 12247593 - 12247465
Alignment:
Q  106 ttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    ||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||| | |||||||||| || |||||||||| |  ||  | ||||     
T  12247593 ttcttagtgtgtgtttggtatagcggtgatgaaaattgattttaatagaattgagtttaagagaattgattctggttaaaagtgagttggatgtaaatt- 12247495  T
Q  206 gtttatatttggatacacttgtttaaaagt 235  Q
      |||| |||||||||||||||||||||||    
T  12247494 aattatgtttggatacacttgtttaaaagt 12247465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 12468381 - 12468257
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||||||| || |   | ||||||||| ||||||||||||||||| | ||||||||||| |||||||||| | |||  | ||||| |||    
T  12468381 tagtgtgtgtttggtatggcggcgggaagaattgattt-gatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtaaattgattt 12468283  T
Q  210 atatttggatacacttgtttaaaagt 235  Q
    |||||||||||||||| |||||||||    
T  12468282 atatttggatacacttttttaaaagt 12468257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 50406305 - 50406220
Alignment:
Q  105 tttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||| |||||||||||||||| | |||| ||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  50406305 tttctaagtgtgtgtttggtatagcggtggcgagaattgattttgataaaattgagtttgaaagatttgattttgattaaaagtga 50406220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 20800234 - 20800358
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| || |  || ||||||||||||||||||||| ||||| ||||||||||||| |||||||||| |   |  ||||||| ||||    
T  20800234 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 20800333  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||  ||||||||    
T  20800334 tgtttggatacactttattaaaagt 20800358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 7826311 - 7826390
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||| ||| ||||  |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  7826311 agtgtgtgtttggtttggcggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtga 7826390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 45710211 - 45710138
Alignment:
Q  117 tgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| | |||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  45710211 tgtttggtatagcggtggcgataattgattttgatagaattgagtttgagtgaattgattttgattaaaagtga 45710138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 6166278 - 6166155
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||| | ||||  || ||||||||||||||||||||| ||||| ||||||||||||| ||| |||||| | |||  |||||| | |||    
T  6166278 agtgtgtgtttggtatcgcggtggtgagaattgattttgatagaattgaatttgagagaattgattttggttagaagtgagtttgatctgaatt-gatta 6166180  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | ||||||||||||  |||||||||    
T  6166179 tgtttggatacactcatttaaaagt 6166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 34718620 - 34718504
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||| ||  ||||   ||||||||||||||||||||||||||||| | |||| |||||| |||||||||| | ||| || ||||| ||||    
T  34718620 agtgtgtgtttggtttgacggtggaaaaaattgattttgatagaattgagtttgagataattaattttggttaaaagtgagtttgatataaattgattta 34718521  T
Q  211 tatttggatacacttgt 227  Q
    | |||| ||||||||||    
T  34718520 tgtttgaatacacttgt 34718504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 43728835 - 43728958
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||| | | ||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |  ||  |||||| | |||    
T  43728835 agtgtgtgtttggtatagcgatggagagaattgattttgatagaattgagtttgagagaattgattttgcttaaaagtgagttggatgtgaatt-gatta 43728933  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||| |||| |||||||||    
T  43728934 tgtttggataaacttatttaaaagt 43728958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 15884368 - 15884285
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggataca 222  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| |  ||  ||||||| ||||| ||||||||||    
T  15884368 aattgattttgatagagttgagtttgacagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggataca 15884285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 5410806 - 5410729
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||| ||| || | ||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  5410806 tgtgtgtttggtttggcggcggcgagaattgattttgatataattgaatttgaaagaattgattttgattaaaagtga 5410729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 25230173 - 25230096
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||  |||| ||| ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||    
T  25230173 tgtgtgtttggtatgacggtggcgagaattgattttgatagaactgagtttgagagaattgattttagttaaaagtga 25230096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 36205357 - 36205236
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    ||||||||||||||  ||||  || |||||||||| |  ||||||||||||| |||||||||||||||||||||||  |  || |||||||||||| |      
T  36205357 gtgtgtttggtatgacggtggtgagaattgattttaacggaattgagtttgagagaattgattttgattaaaagtgggttagatatgaattggtttttga 36205258  T
Q  214 ttggatacacttgtttaaaagt 235  Q
    ||||||| |||| |||||||||    
T  36205257 ttggataaacttatttaaaagt 36205236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 6464775 - 6464697
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||| |||||||||| |||||||||| |||||||||||||| ||||||||||||  || || |||||| ||||||||||    
T  6464775 gtgtttgtttggtatagtggtgacgagaattgattttgatataattgagtttgagtgagttcattttggttaaaagtga 6464697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 29441361 - 29441274
Alignment:
Q  103 aatttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||| |   | |||||  | |||||||||||||||||||||||||||  |||||||||||| ||| ||||||    
T  29441361 aatttcttagtgtgtgtttgattctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtga 29441274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 15576604 - 15576544
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||| ||  |||||||||| | |||||||||||| |||||||||||    
T  15576604 ggtgacgaaaattgattttaattaaattgagtttaagagaattgattttaattaaaagtga 15576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 16556362 - 16556295
Alignment:
Q  152 agaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggata 220  Q
    |||||||| ||||||| ||||||||||| |||||||||||| ||||||||| || ||||| ||||||||    
T  16556362 agaattgaatttgacataattgattttggttaaaagtgaat-tgagatgaagtgatttatgtttggata 16556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 7765241 - 7765319
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   | |||||||| ||||||||||||||||||||| ||| ||| |||||||| ||| |||||||||    
T  7765241 agtgtgtgtttggttatgcggtgacgagaattgattttgatagaattga-ttttacataattgattatgaataaaagtga 7765319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 13344944 - 13344863
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||| |||||||||||  || ||||| || ||||||||||||| ||||||| ||||  ||||||||||||| ||||||||||    
T  13344944 cttagcgtgtgtttggttgggcggtgaagataattgattttgattgaattgattttg-tagaattgattttggttaaaagtga 13344863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 40352561 - 40352481
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||   | ||||| || ||||||||||||||||||||| ||||   |||||||||||| ||||||||||    
T  40352561 ttagtgtgtgtttggttgtgcggtgaggagaattgattttgatagaattgattttg-tggaattgattttggttaaaagtga 40352481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 43134597 - 43134540
Alignment:
Q  133 gacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||| |||| |||| ||||||||||||||| | ||||||||||||| ||||||||||    
T  43134597 gacgagaatttatttggatagaattgagtttaagagaattgattttggttaaaagtga 43134540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 291704 - 291744
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgat 151  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  291704 agtgtgtgtttggtatggtggtggcgagaattgattttgat 291744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 25061395 - 25061316
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||   | |||||| ||||||||||||| || |||||| ||||   |||||||||||| ||||||||||    
T  25061395 agtgtgtgtttggttctgcggtgacaaaaattgattttgttaaaattgattttggttgaattgattttggttaaaagtga 25061316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 49242967 - 49243014
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaa 186  Q
    |||| ||||||||| |||||||||||| ||||||||||||| ||||||    
T  49242967 aattaattttgatataattgagtttgagagaattgattttggttaaaa 49243014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 6061308 - 6061246
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgatt 176  Q
    ||||||||||| ||  ||||  |||||||||||||||||||||||| ||||| | ||||||||    
T  6061308 gtgtgtttggtttgacggtggtgaaaattgattttgatagaattgaatttgagataattgatt 6061246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 4347116 - 4347064
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||| ||||||||| ||||  ||||||||||||| ||||||||||    
T  4347116 aaaattgattttggtagaattgattttgt-agaattgattttggttaaaagtga 4347064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 41512864 - 41512823
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  41512864 aattgattctgatagaattgattctgacagaattgattttga 41512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 4369776 - 4369828
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttg 164  Q
    ||||||||||||| ||| ||||  ||||||||||||||| |||||||| ||||    
T  4369776 gtgtgtgtttggtttggcggtggagaaaattgattttgagagaattgattttg 4369828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 30557683 - 30557624
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||| || ||||||||||||||||||||| | ||  ||||||||||||| ||||||||||    
T  30557683 ggtgaggagaattgattttgatagaattgattctg-tagaattgattttggttaaaagtga 30557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 46033129 - 46033169
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattt 177  Q
    |||||||||| |||||||||||| ||||| |||||||||||    
T  46033129 aaaattgattctgatagaattgattttgaaagaattgattt 46033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 3622398 - 3622527
Alignment:
Q  106 ttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |  ||  |||||||    
T  3622398 ttcttagtgtgtgtttgttatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattg 3622497  T
Q  206 gtttatatttggatacacttgtttaaaagt 235  Q
     ||||| |||||||||||||  ||||||||    
T  3622498 atttatgtttggatacacttacttaaaagt 3622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 39391083 - 39391194
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||   ||||||||||||| |||||||||| | |||| ||||||| ||||| |    
T  39391083 gtgtgtttggtatggcggtggcgaaaattgattttgatagaattgatttttttagaattgattttggttaaaagtgagtttgaggtgaattgatttatgt 39391182  T
Q  214 ttggatacactt 225  Q
    ||||||||||||    
T  39391183 ttggatacactt 39391194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 37562739 - 37562612
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    ||||||||||||||||| ||| ||||  || ||||||||||||||||||||||||| | ||||||||||||  |||||||||| |  ||  ||||||| |    
T  37562739 cttagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttaagagaattgatttttgttaaaagtgagttggatgtgaattgat 37562640  T
Q  208 ttatatttggatacacttgtttaaaagt 235  Q
    |||| ||||||||||||| |||||||||    
T  37562639 ttatgtttggatacacttatttaaaagt 37562612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 47217509 - 47217608
Alignment:
Q  136 gaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||  ||||||| ||||| ||||||| |||| | ||||||||    
T  47217509 gaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtttgatgtgaattgatttatgtttggatgcactcgcttaaaagt 47217608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 39977719 - 39977609
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||||||||||  | |||||||| | ||| |||||||| |||    
T  39977719 tagtgtgtgtttggtatggcggtggcgataattgattttgatagaatttagtttgaaagaattgattttagtcaaaagtgagtttgatatgaattgattt 39977620  T
Q  210 atatttggata 220  Q
    || ||||||||    
T  39977619 atttttggata 39977609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 41715822 - 41715698
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||| |  ||  | ||||| |||||    
T  41715822 gtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagttagatgtaaattgatttat 41715723  T
Q  212 atttggatacacttgtttaaaagta 236  Q
     ||||||| ||||  ||||||||||    
T  41715722 gtttggatgcactcatttaaaagta 41715698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 37639597 - 37639515
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaat 192  Q
    ||||||||||||||||||| || |  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37639597 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgaat 37639515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 3342955 - 3342842
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttat 211  Q
    ||||||||||||| ||| ||||  || |||| |||||||||||||||||||||| ||||||||||||  |||||||||| |  || |||||||| |||||    
T  3342955 gtgtgtgtttggtttggcggtggggagaattaattttgatagaattgagtttgagagaattgattttagttaaaagtgagttggatatgaattgatttat 3342856  T
Q  212 atttggatacactt 225  Q
     |||||||||||||    
T  3342855 gtttggatacactt 3342842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 48134742 - 48134622
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatat 213  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||||| ||||||||||||  |||||||||  | ||||  ||||| | |||| |    
T  48134742 gtgtgtttggtatggcggttgcgaaaattaattttgatagaattgagtttgagagaattgatttttgttaaaagtgggtttgaggagaatt-gattatgt 48134644  T
Q  214 ttggatacacttgtttaaaagt 235  Q
    ||||||| ||||||||||||||    
T  48134643 ttggataaacttgtttaaaagt 48134622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 43631642 - 43631718
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||| ||||  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  43631642 gtgtgtttggtatggcggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 43631718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 47022082 - 47021971
Alignment:
Q  114 gtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgaga-tgaattggtttata 212  Q
    |||||||||||||| |||||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||| ||  ||| | ||||||| |||||     
T  47022082 gtgtgtttggtatgatggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagt-aagttgaaagtgaattgatttatg 47021984  T
Q  213 tttggatacactt 225  Q
    |||||||||||||    
T  47021983 tttggatacactt 47021971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 48459876 - 48459752
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||  | ||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |   |  ||||||| ||||    
T  48459876 agtgtgtgtttggtatgacgttggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttgaatgtgaattgattta 48459777  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | |||||||||||||  ||||||||    
T  48459776 tgtttggatacacttacttaaaagt 48459752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 34010504 - 34010426
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  34010504 agtgtgtgtttggt-tggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtga 34010426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 19097562 - 19097484
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||| || |  || |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19097562 gtgtgtgtttggtatggcggcggtgagaattaattttgatagaattgagtttgaaagaattgattttgattaaaagtga 19097484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 9456242 - 9456147
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    ||||||||||||||||||| |||| || ||||||||||||| |||||||||| | |||| | |||| | |||| |||||||||||||||||||||||    
T  9456242 aattgattttgatagaattaagttcgagagaattgattttggttaaaagtgagtttgaggtaaatt-gattatgtttggatacacttgtttaaaagt 9456147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 3375657 - 3375543
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    |||| ||||||||||| |||| ||  || ||||||||||||||||||||||||||| |||||| |||||| |||||||||| | ||   ||||||| |||    
T  3375657 tagtatgtgtttggtacggtgatggagagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagtttggtgtgaattgattt 3375558  T
Q  210 atatttggatacact 224  Q
     | ||||||||||||    
T  3375557 gtgtttggatacact 3375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 32187106 - 32186981
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    ||||| |||||||||||  |||| ||| ||||||||||||||||||| | ||| | |||||||||||||||||||||||| |  ||  | ||||| ||||    
T  32187106 agtgtatgtttggtatgacggtggcgagaattgattttgatagaattaattttaagagaattgattttgattaaaagtgagttagatgtaaattgattta 32187007  T
Q  211 tatttggatacacttgtttaaaagta 236  Q
    | ||||||| ||||  ||||||||||    
T  32187006 tgtttggatgcactcatttaaaagta 32186981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 10371900 - 10371980
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||    ||||  || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  10371900 tagtgtgtgtttggtaaaacggtggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 10371980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 24770854 - 24770933
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||| ||||||||||  |||||||| |||| |||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  24770854 agtgtgcgtttggtatgacggtgacgagaattaattttgatagaattaagtttgagataattgattttggttaaaagtga 24770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 46541762 - 46541687
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||| ||| ||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  46541762 tgtgtttggtttggcggtggttaaaattgattttgatagaattgagtttgagagaattgattttggttagaagtga 46541687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 34365924 - 34366002
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    ||||||||||||||||||| |||| | | |||||||||||||| ||| |||||||| ||||||||||||  ||||||||    
T  34365924 tagtgtgtgtttggtatggcggtggctagaattgattttgatataatggagtttgaaagaattgattttagttaaaagt 34366002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 42904719 - 42904595
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    ||||||||||||||||||  |||   |||||  |||||||||||||||||||||| ||||||| |||||  ||||| ||| |  ||  ||||||| ||||    
T  42904719 agtgtgtgtttggtatggcagtgggaaaaatgaattttgatagaattgagtttgagagaattgtttttggataaaaatgagttagatgtgaattgattta 42904620  T
Q  211 tatttggatacacttgtttaaaagt 235  Q
    | ||| |||||||| ||||||||||    
T  42904619 tgttttgatacactcgtttaaaagt 42904595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 44967349 - 44967421
Alignment:
Q  118 gtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||  |||  ||| |||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  44967349 gtttggtatgacggtagcgagaattgattttgatataattgagtttgagagaattgattttggttaaaagtga 44967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 3750820 - 3750738
Alignment:
Q  143 gattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacactt 225  Q
    |||||| ||| |||||||||||| ||||||||||||| |||||||||| |  ||  ||||||| ||||| |||||||||||||    
T  3750820 gattttaataaaattgagtttgagagaattgattttggttaaaagtgagttggatgtgaattgatttatgtttggatacactt 3750738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 38230232 - 38230110
Alignment:
Q  113 tgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttata 212  Q
    |||||||||||||||| ||    || ||||||||||||||||||||| ||| | ||||||||||||| |||||||||| |   |  ||||||| |||||     
T  38230232 tgtgtgtttggtatggcggccgagagaattgattttgatagaattgaatttaagagaattgattttggttaaaagtgagttgaatgtgaattgatttatg 38230133  T
Q  213 tttggatacacttgtttaaaagt 235  Q
    |||||||||| ||  ||||||||    
T  38230132 tttggatacattttattaaaagt 38230110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 386428 - 386501
Alignment:
Q  115 tgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    |||||||||| ||| ||||   |||||||||||||||| |||||||||||| || |||||||||| ||||||||    
T  386428 tgtgtttggtttggcggtggttaaaattgattttgatataattgagtttgagagtattgattttggttaaaagt 386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 12964742 - 12964697
Alignment:
Q  133 gacgaaaattgattttgatagaattgagtttgacagaattgatttt 178  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||    
T  12964742 gacgaaaattgattttgatagaattgagtttgagataattgatttt 12964697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 25472152 - 25472193
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  25472152 aattgattttgatagaattgattttgacagaattgattttga 25472193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 235
Target Start/End: Original strand, 43737881 - 43738006
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    |||||||||||| |||||| |  |  || |||||||||| | | |||||||||| | |||||||||||||||||||||| | |  || |||||||| |||    
T  43737881 tagtgtgtgtttagtatggcgacggtgagaattgattttaacataattgagtttaagagaattgattttgattaaaagttagttagatatgaattgattt 43737980  T
Q  210 atatttggatacacttgtttaaaagt 235  Q
     | |||||||| |||| |||||||||    
T  43737981 ttgtttggataaacttatttaaaagt 43738006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 36920149 - 36920200
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||| ||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  36920149 aattaattttgataaaattgagtttgaaagaattgattttggttaaaagtga 36920200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 37008296 - 37008407
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||| |  ||| |||||| ||||||| |||||||||| ||||   |||||||||||| |||||||||| | |||| || |||| ||||    
T  37008296 agtgtgtgtttggtatcg--gtggcgaaaactgatttttatagaattgattttgttggaattgattttggttaaaagtgagtttgaggtg-attgattta 37008392  T
Q  211 tatttggatacactt 225  Q
    | |||||| ||||||    
T  37008393 tgtttggagacactt 37008407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 34010932 - 34010978
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaa 185  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||    
T  34010932 aattgattttgatagaattgagtttgagaaaattgattttggttaaa 34010978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 39634103 - 39634217
Alignment:
Q  106 ttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattg 205  Q
    |||||||||||||||||||   | ||||  || ||||||||| || |||||||| ||||  ||||||||||||| |||||||||| |   | ||||||||    
T  39634103 ttcttagtgtgtgtttggttctgcggtggagagaattgatttggacagaattgattttgttagaattgattttggttaaaagtgagttgaatatgaattg 39634202  T
Q  206 gtttatatttggata 220  Q
     ||||| ||||||||    
T  39634203 atttatgtttggata 39634217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 32206044 - 32205967
Alignment:
Q  158 gagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgtttaaaagt 235  Q
    |||||||| |||||||||||| ||||||||||  | |||  ||||||| ||||| |||||||||||||  ||||||||    
T  32206044 gagtttgaaagaattgattttaattaaaagtgggtttgatgtgaattgatttatgtttggatacacttacttaaaagt 32205967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 40903135 - 40903219
Alignment:
Q  135 cgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggata 220  Q
    |||||||||||||||| | |||||| ||||| |||||||||||||  ||||||||| | |||  | ||||||||||| ||||||||    
T  40903135 cgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagt-tgaacttaattggtttatgtttggata 40903219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 2839437 - 2839377
Alignment:
Q  130 ggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||| |||| ||||||| ||||| ||||| |||||| || ||||||||    
T  2839437 ggtgacgaaaattgattatgattgaattgattttgatagaatagatttttatgaaaagtga 2839377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 12632054 - 12632105
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||||||  |||||| ||||| ||||||| ||||||||||    
T  12632054 aattgattttgatagaattttgtttgagagaatagattttggttaaaagtga 12632105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 25472135 - 25472178
Alignment:
Q  137 aaaattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||    
T  25472135 aaaattgattctgatagaattgattttgatagaattgattttga 25472178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 42752126 - 42752213
Alignment:
Q  103 aatttcttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||| |||||||||||||||||   | ||||  || |||||||||||| |||||||| ||||  ||||||||||||  ||||||||||    
T  42752126 aattgcttagtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtga 42752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 12212440 - 12212490
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtg 189  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||| |||||    
T  12212440 aattgattttgatagaattgagcttgagtgaattgattttggttagaagtg 12212490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 37371380 - 37371339
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    ||||||||||||||||||||| | |||| |||||||||||||    
T  37371380 aattgattttgatagaattgattctgacggaattgattttga 37371339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 42740521 - 42740481
Alignment:
Q  148 tgatagaattgagtttgacagaattgattttgattaaaagt 188  Q
    ||||| |||||||||||| ||||||||||||| ||||||||    
T  42740521 tgatataattgagtttgagagaattgattttggttaaaagt 42740481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 233
Target Start/End: Complemental strand, 8594 - 8472
Alignment:
Q  111 agtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttta 210  Q
    |||||||||||||||||| ||||   | ||||||||||||||||||||||||||| | ||||||||||| |||||||||| | |||  ||||||| ||||    
T  8594 agtgtgtgtttggtatggcggtgggaataattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtttgatgtgaattgattta 8495  T
Q  211 tatttggatacacttgtttaaaa 233  Q
    | ||||||||||||| |||||||    
T  8494 tgtttggatacacttttttaaaa 8472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 9256 - 9143
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggttt 209  Q
    |||| |||||||||||||| ||||  || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |  || ||||||| || |    
T  9256 tagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttagatatgaatt-gtat 9158  T
Q  210 atatttggatacact 224  Q
    || ||||||||||||    
T  9157 atgtttggatacact 9143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 1981 - 2096
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtt 208  Q
    |||||||||||||||  ||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| || ||| ||| | ||| |||||||| ||    
T  1981 ttagtgtgtgtttggattggcggtgtcgataattgattttgatagaattgagtttgaaagaattgattttggttcaaaatgagtttgatatgaattgatt 2080  T
Q  209 tatatttggatacact 224  Q
    ||| ||||||| ||||    
T  2081 tatgtttggatgcact 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 5784 - 5865
Alignment:
Q  109 ttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||||||||||||||   || |||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  5784 ttagtgtgtgtttggtatggtggtagggagaattgattttgatataattgagtttgagagaattgattttggttaaaagtga 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 253276 - 253163
Alignment:
Q  108 cttagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggt 207  Q
    |||||||||||||||||  || || |  || ||||||||||||||||||||||||||| ||||||||||||| ||||| |||| |  || |||||||| |    
T  253276 cttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttggatatgaattgat 253177  T
Q  208 ttatatttggatac 221  Q
    |||| |||||||||    
T  253176 ttatgtttggatac 253163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 29080 - 29158
Alignment:
Q  112 gtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    ||||||||||||| ||||||||   | ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  29080 gtgtgtgtttggtttggtggtggtaataattgattttgatagaattaagtttgaaagaattgattttggttaaaagtga 29158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 15213 - 15292
Alignment:
Q  110 tagtgtgtgtttggtatggtggtgacgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtga 190  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  15213 tagtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtga 15292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 118394 - 118482
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggatacacttgt 227  Q
    ||||||||||||| ||||||||||||| ||||| ||||||  |||||||||| | |||  | ||||| ||||| |||||||||||||||    
T  118394 aattgattttgatcgaattgagtttgatagaatagatttttgttaaaagtgagtttgatgtaaattgatttatgtttggatacacttgt 118482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 46883 - 46799
Alignment:
Q  135 cgaaaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgaatatgagatgaattggtttatatttggata 220  Q
    |||||||||||||||| | |||||| ||||| |||||||||||||  ||||||||| | |||  | ||||||||||| ||||||||    
T  46883 cgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagt-tgaacttaattggtttatgtttggata 46799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 32095 - 32058
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgatt 176  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  32095 aattgattttgatagaattgattttgatagaattgatt 32058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 32446 - 32487
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| |||||||||||| | ||||||||||||||||||    
T  32446 aattgattatgatagaattgattgtgacagaattgattttga 32487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 38425 - 38384
Alignment:
Q  139 aattgattttgatagaattgagtttgacagaattgattttga 180  Q
    |||||||| | |||||||||| ||||||||||||||||||||    
T  38425 aattgattctaatagaattgattttgacagaattgattttga 38384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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