View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11506_low_3 (Length: 301)
Name: NF11506_low_3
Description: NF11506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11506_low_3 |
 | |
|
| [»] chr7 (28 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
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|
Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 301
Target Start/End: Complemental strand, 8576620 - 8576338
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8576620 |
tcaatgtcatgcagataatcaatgaaccgactgcggcagctcttgcgtatggccttcaaaagagagctaattgtgttgataaaagaaatatttttatctt |
8576521 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8576520 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggccaa |
8576421 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagc |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8576420 |
gactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagc |
8576338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 21 - 287
Target Start/End: Complemental strand, 8545924 - 8545659
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8545924 |
aatgtcatgcggataatcaatgaaccgactgcggcggctcttgcatatggccttcaaaagagagctaattg-gttgataagagaaatatttttatctttg |
8545826 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||| || || ||||| || |||||||||||||| ||||||||| ||||||| ||| |||| |
|
|
| T |
8545825 |
accttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacacttacctaggcggtgaaga |
8545726 |
T |
|
| Q |
221 |
ctttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagt |
287 |
Q |
| |
|
||||||||||| ||||||| || ||||||| |||||||||| || ||| |||| |||||||||||| |
|
|
| T |
8545725 |
ctttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagt |
8545659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 8570605 - 8570337
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8570605 |
tcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggccttcaaaagagagctaattttgttgataagagaaatatttttatctt |
8570506 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||||||||| |||||||||||||| |||||| || |
|
|
| T |
8570505 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacactcacctgggaggtgaa |
8570406 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagt |
287 |
Q |
| |
|
|| |||||||||| |||| || ||||||||| ||| |||||| ||| ||| |||| |||||||||||| |
|
|
| T |
8570405 |
gattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagt |
8570337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 8581994 - 8581763
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8581994 |
tcaatgtaatgcggataatcaatgaaccgactgcggcagctcttgcatatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
8581895 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||| |||||||||||||| ||||| || |
|
|
| T |
8581894 |
tgaccttggaggtggaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagacactcacctgggaggggaa |
8581795 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgt |
250 |
Q |
| |
|
|| |||||||||| ||||||| |||||||||| |
|
|
| T |
8581794 |
gattttgataacagaatggtgaatcactttgt |
8581763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 8602268 - 8602026
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| |||| |||||||||||| || ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || || |
|
|
| T |
8602268 |
tcaatgtaatgcggataatcaatgagccaactgcagctgctcttgcatatggccttcaaaagagagctaattgtgttgaagagagaaatattttcatatt |
8602169 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||| ||||| ||||||||||||||||| ||| |||||||| ||||||| ||| |||| ||||||||||||||| |||||||||| ||||| ||||| | |
|
|
| T |
8602168 |
tgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacaccttggaggagag |
8602069 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||| |||||||| |
|
|
| T |
8602068 |
gactttgataaccgaatggtgaaccactttgttatggagttca |
8602026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 8382750 - 8382992
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| |||| |||||||||||| || ||||| || |||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||| ||||| |
|
|
| T |
8382750 |
tcaatgtaatgcggataatcaatgagccaactgccgctgctcttgcatatggccttcagaagagagctaattgtcttgaagagagaaatattttcatctt |
8382849 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||| ||||| ||||||||||||||||||||| | |||||| ||||||| |||||||| | || ||||||||||||||||||||||| ||||||||| || |
|
|
| T |
8382850 |
tgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggaggtgaa |
8382949 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||||| ||||||| ||| ||| | |||||||| | ||||||| |
|
|
| T |
8382950 |
gacttagataacagaatcgtgaagtactttgttgacgagttca |
8382992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 8559625 - 8559387
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| ||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
8559625 |
aatgtaatgcagataatcaatgaaccaactgcagctgctcttgcatatggacttcaaaagagatctaattgtgttaaagagagaaatattttcatctttg |
8559526 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| || || ||||||||||||||||| ||| |||||||| ||||||| ||| |||| ||||||||||||||| |||||||||| ||||| ||||| | || |
|
|
| T |
8559525 |
atctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacacacacctcggaggagagga |
8559426 |
T |
|
| Q |
221 |
ctttgataacataatggtggatcactttgttaaggagtt |
259 |
Q |
| |
|
||||||||||| ||||||| | |||||||| || ||||| |
|
|
| T |
8559425 |
ctttgataacagaatggtgaaacactttgtaaaagagtt |
8559387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 261
Target Start/End: Complemental strand, 8610194 - 8609969
Alignment:
| Q |
36 |
atcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtggaa |
135 |
Q |
| |
|
||||||||||| || || ||||||||||| ||||| ||||| ||||||||||||||||| || || |||||||||||||||||||| ||||| ||||| | |
|
|
| T |
8610194 |
atcaatgaaccaacggctgcggctcttgcatatggtcttcagaagagagctaattgtgtggaaaatagaaatatttttatctttgatcttggtggtggga |
8610095 |
T |
|
| Q |
136 |
cttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataacataat |
235 |
Q |
| |
|
|||| ||||||||| |||||||| |||| ||||||| ||||| |||||||| ||||| ||||| |||||||| ||||| | ||||||||| ||| ||| |
|
|
| T |
8610094 |
ctttcgatgtgtctgttctcacaattaaaaacaatgctttcgatgtcaaggctactgctggagatactcaccttggaggagaggactttgatcacagaat |
8609995 |
T |
|
| Q |
236 |
ggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||| |||||||||| |||||||||| |
|
|
| T |
8609994 |
ggttaatcactttgtgaaggagttca |
8609969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 8538330 - 8538120
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| |||| ||||||||||||||| || || || |||||||| || ||||||||||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
8538330 |
tcaatgtaatgcggataatcaatgaacctacagctgctgctcttgcatacggccttcaaaagagagctaattgtgttgaagagagaaaagttttcatctt |
8538231 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||| ||||| ||||||||||||||||| ||| | || ||| | ||||| |||| ||| ||||||||||||||||||||| |||||||| ||||| | |
|
|
| T |
8538230 |
tgatcttggtggtggaacttttgatgtatctctccttacattgaagaataatgcctttacagtcaaggccactgccggagatactcaccttggaggagag |
8538131 |
T |
|
| Q |
219 |
gactttgataa |
229 |
Q |
| |
|
||||||||||| |
|
|
| T |
8538130 |
gactttgataa |
8538120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 261
Target Start/End: Original strand, 10494250 - 10494490
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||| || ||| |||| ||||||||| | |||||| | |||||| | ||| ||||||||||| |||||| |
|
|
| T |
10494250 |
aatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgacaagagaagtgattgtgagggtaaccgaaatatttttgtctttg |
10494349 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| || || ||||| ||||||||||||||||| |||||| ||||| ||||||| ||||| || |||||||| || |||||||||| || || | || |
|
|
| T |
10494350 |
atctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgggggagagga |
10494449 |
T |
|
| Q |
221 |
ctttgataacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||| ||||||| ||||||| || | |||||| ||||||||| |
|
|
| T |
10494450 |
cttcgataacagaatggtgaattattttgttgaggagttca |
10494490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 8636230 - 8636439
Alignment:
| Q |
32 |
gataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggt |
131 |
Q |
| |
|
||||||||||||||| ||||| || ||| |||||||||| ||||||||||||| ||| |||||| | ||||||| ||||| | ||||| ||||| ||| |
|
|
| T |
8636230 |
gataatcaatgaaccaactgctgcagcttttgcgtatggacttcaaaagagaggtaactgtgttaaagagagaaacattttcgtatttgatcttggtggt |
8636329 |
T |
|
| Q |
132 |
ggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataaca |
231 |
Q |
| |
|
|| || || || |||||||| |||| | |||| | ||||| ||||| || ||||||||||||||||| ||||| ||||| | ||||||||||||| |
|
|
| T |
8636330 |
ggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggagaggactttgataaca |
8636429 |
T |
|
| Q |
232 |
taatggtgga |
241 |
Q |
| |
|
||||||||| |
|
|
| T |
8636430 |
gaatggtgga |
8636439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 261
Target Start/End: Original strand, 13333344 - 13333572
Alignment:
| Q |
33 |
ataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtg |
132 |
Q |
| |
|
|||||||||||||| ||||| || ||| |||| ||||||||| | |||||| | |||||| || |||| ||||||||||| ||||||| || || |||| |
|
|
| T |
13333344 |
ataatcaatgaacctactgctgcagctattgcatatggccttgacaagagacgtgattgtgatggtaagcgaaatatttttgtctttgatctgggtggtg |
13333443 |
T |
|
| Q |
133 |
gaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataacat |
232 |
Q |
| |
|
| ||||||||||||||||| || ||| ||| | ||||||| ||||| || ||||| || ||| |||||||||| || || ||||||| ||||||| |
|
|
| T |
13333444 |
gtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgggggagaagacttcgataacag |
13333543 |
T |
|
| Q |
233 |
aatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||||||| | | |||||| ||||||||| |
|
|
| T |
13333544 |
aatggtgaactattttgttgaggagttca |
13333572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 34 - 238
Target Start/End: Complemental strand, 17268218 - 17268014
Alignment:
| Q |
34 |
taatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtgg |
133 |
Q |
| |
|
||||||||||||| ||||| || ||| |||| ||||||||| |||||| |||| |||||||| | | ||||||||| ||||||||||||| ||||| |
|
|
| T |
17268218 |
taatcaatgaaccaactgctgcagctattgcatatggccttggcaagagaactaactgtgttgaagaacggaatatttttgtctttgaccttggtggtgg |
17268119 |
T |
|
| Q |
134 |
aacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataacata |
233 |
Q |
| |
|
||||||||||||||| | | ||| ||||| | || ||||||||||| |||||||| | ||||||||||| || || ||| | ||||||||||| | | |
|
|
| T |
17268118 |
gacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataataga |
17268019 |
T |
|
| Q |
234 |
atggt |
238 |
Q |
| |
|
||||| |
|
|
| T |
17268018 |
atggt |
17268014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 8667711 - 8667493
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||||||| | ||||||||||||||| |||||||| ||| |||| ||||||||| | |||||| | | |||| || || ||||||||||| |||||| |
|
|
| T |
8667711 |
aatgtcattcggataatcaatgaacctactgcggcagctattgcatatggccttgacaagagaaatgactgtgatggtagccgaaatatttttgtctttg |
8667612 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| || || || || ||||||||||||||||| |||||| ||||| ||||||| ||||| || |||||||| ||| |||||||||| || || | || |
|
|
| T |
8667611 |
atctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgggggcgagga |
8667512 |
T |
|
| Q |
221 |
ctttgataacataatggtg |
239 |
Q |
| |
|
||| ||||||| ||||||| |
|
|
| T |
8667511 |
cttcgataacagaatggtg |
8667493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 29581715 - 29581945
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| ||| ||||||||| ||||| ||||| || || ||||| ||||| |||||||| ||| ||||| ||||| || ||||||| || ||||| |
|
|
| T |
29581715 |
tcaatgtaatgaggataatcaacgaaccaactgctgctgcacttgcatatggtattcaaaagggaggtaattttgttggaaaacgaaatatattcatctt |
29581814 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||| ||||| ||||| ||||||||||||||| |||||||| | ||| | || || ||||| ||||||||||| || || |||||||||||||| | |
|
|
| T |
29581815 |
tgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggaggagag |
29581914 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttg |
249 |
Q |
| |
|
|||||||||||| ||||||| || |||||| |
|
|
| T |
29581915 |
gactttgataaccgaatggtgaattactttg |
29581945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 29577543 - 29577766
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgat---aagagaaatatttttat |
115 |
Q |
| |
|
||||||| |||| ||||||||||||||| ||||| || || ||||| ||||| |||||||||||| ||||| ||||| | ||| ||||| | || || |
|
|
| T |
29577543 |
tcaatgtaatgcggataatcaatgaaccaactgctgctgcacttgcatatggaattcaaaagagaggtaattttgttgttggaaagcgaaatgtattcat |
29577642 |
T |
|
| Q |
116 |
ctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggt |
215 |
Q |
| |
|
|||||| ||||| ||||| || |||||||||||| |||||||| ||||| | || || ||||| ||||||||||| || || |||||||||||||| |
|
|
| T |
29577643 |
ctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggagga |
29577742 |
T |
|
| Q |
216 |
caagactttgataacataatggtg |
239 |
Q |
| |
|
| ||||| ||||| | ||||||| |
|
|
| T |
29577743 |
gaggacttcgataataaaatggtg |
29577766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 249
Target Start/End: Complemental strand, 8647158 - 8646941
Alignment:
| Q |
32 |
gataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggt |
131 |
Q |
| |
|
||||||||||||||| || || || ||||| || ||||||||| | |||||| | ||||||| ||| | ||||||| || ||||| |||||||| ||| |
|
|
| T |
8647158 |
gataatcaatgaaccaacagctgctgctctcgcatatggccttgacaagagaacaaattgtgctgaagaacgaaatatattcatcttcgaccttggtggt |
8647059 |
T |
|
| Q |
132 |
ggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataaca |
231 |
Q |
| |
|
|||||||||||||||||| | || ||| ||||| | || ||||| | || || ||||| || ||| |||||||||| ||||| | |||||||||| | |
|
|
| T |
8647058 |
ggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggactttgatagta |
8646959 |
T |
|
| Q |
232 |
taatggtggatcactttg |
249 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
8646958 |
gaatggtggaccactttg |
8646941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 261
Target Start/End: Complemental strand, 8654731 - 8654502
Alignment:
| Q |
32 |
gataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggt |
131 |
Q |
| |
|
|||| |||||||||| ||||| || ||| |||| ||||||||| | ||| || ||| | || || ||| | |||||||| | ||||| ||||| ||| |
|
|
| T |
8654731 |
gatactcaatgaacctactgccgcagctattgcatatggccttgacaagcgaagtaactatgatggtaaacggaatattttggtatttgatcttggtggt |
8654632 |
T |
|
| Q |
132 |
ggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataaca |
231 |
Q |
| |
|
|| ||||||||||||||||| |||||| ||||| ||||||| || || || |||||||| ||| |||| |||||||| || ||||||||||||||| |
|
|
| T |
8654631 |
ggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggagaagactttgataaca |
8654532 |
T |
|
| Q |
232 |
taatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||||||| | ||||||| ||||||||| |
|
|
| T |
8654531 |
gaatggtgtactactttgtagaggagttca |
8654502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 261
Target Start/End: Complemental strand, 8659655 - 8659415
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||| || ||| |||| ||||| || | ||||||| | | |||| || ||| ||||||||| |||||| |
|
|
| T |
8659655 |
aatgtcattcagataattaatgaacctactgctgcagctattgcatatggttttgacaagagaggtgactgtgatggtaaacaaaatattttggtctttg |
8659556 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||| || ||| | ||| ||||||| ||||| || |||||| | ||| |||||||||| ||||| | || |
|
|
| T |
8659555 |
atcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagagga |
8659456 |
T |
|
| Q |
221 |
ctttgataacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
|||||||| || ||||||| | ||||||| ||||||||| |
|
|
| T |
8659455 |
ctttgatagcagaatggtgaactactttgtagaggagttca |
8659415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 239
Target Start/End: Complemental strand, 17260449 - 17260315
Alignment:
| Q |
105 |
aatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactc |
204 |
Q |
| |
|
||||||||| ||||||||||||| || || ||||||||||||||| | | ||| ||||| | || ||||||||||| |||||||| | |||||||||| |
|
|
| T |
17260449 |
aatatttttgtctttgaccttggtggggggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactc |
17260350 |
T |
|
| Q |
205 |
acctaggaggtcaagactttgataacataatggtg |
239 |
Q |
| |
|
| || || ||| | ||||||||||| | ||||||| |
|
|
| T |
17260349 |
atcttgggggtgaggactttgataatagaatggtg |
17260315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 27830835 - 27830959
Alignment:
| Q |
105 |
aatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactc |
204 |
Q |
| |
|
||||||||| | ||||||||||| ||||| ||||||||||||||| || | ||| ||||| | || |||||| |||| ||||| ||||| ||| |||||| |
|
|
| T |
27830835 |
aatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacactc |
27830934 |
T |
|
| Q |
205 |
acctaggaggtcaagactttgataa |
229 |
Q |
| |
|
|||| || || | ||||||||||| |
|
|
| T |
27830935 |
accttggtggagaggactttgataa |
27830959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 288
Target Start/End: Complemental strand, 1301668 - 1301485
Alignment:
| Q |
105 |
aatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactc |
204 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||| || || | ||| | ||||||| ||||| || ||||||| ||| | |||| |
|
|
| T |
1301668 |
aatattttggtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactc |
1301569 |
T |
|
| Q |
205 |
acctaggaggtcaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtg |
288 |
Q |
| |
|
|||| ||||| | ||||||||||| | ||||||| ||||||| |||||||||| || ||| | |||| ||| ||||||| |
|
|
| T |
1301568 |
accttggaggagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtg |
1301485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 8585593 - 8585724
Alignment:
| Q |
32 |
gataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggt |
131 |
Q |
| |
|
||||||||||||||| ||||| || ||| |||| ||||||||| | || | || ||| |||| || | | ||||||||||| | ||||| ||||| ||| |
|
|
| T |
8585593 |
gataatcaatgaacccactgctgcagctattgcatatggccttgacaacaaaggtaactgtgatggtgaacgaaatatttttgtgtttgatcttggtggt |
8585692 |
T |
|
| Q |
132 |
ggaacttttgatgtgtctattctcacagttaa |
163 |
Q |
| |
|
|| ||||||||||||||| | |||||| |||| |
|
|
| T |
8585693 |
gggacttttgatgtgtctctcctcacaattaa |
8585724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 8628742 - 8628609
Alignment:
| Q |
103 |
gaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacac |
202 |
Q |
| |
|
||||||||||| | ||||| ||||| ||||| ||||||||||||||| | |||||| |||| ||||||| ||||| || |||||||| ||| | || |
|
|
| T |
8628742 |
gaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatac |
8628643 |
T |
|
| Q |
203 |
tcacctaggaggtcaagactttgataacataatg |
236 |
Q |
| |
|
|||||| || || | ||||||||||||| |||| |
|
|
| T |
8628642 |
tcaccttggtggagaggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 3147472 - 3147348
Alignment:
| Q |
105 |
aatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactc |
204 |
Q |
| |
|
|||||||||||||||||| | || ||||| ||||||||||||||| |||| ||| ||||| | || ||||| |||| ||||||| || ||| |||| | |
|
|
| T |
3147472 |
aatatttttatctttgacttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacaccc |
3147373 |
T |
|
| Q |
205 |
acctaggaggtcaagactttgataa |
229 |
Q |
| |
|
|||| || || | ||||||||||| |
|
|
| T |
3147372 |
accttgggggagaggactttgataa |
3147348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 7877607 - 7877671
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagaga |
83 |
Q |
| |
|
||||||| |||| |||||| |||||||| ||||| || || ||||| |||||||||||||||||| |
|
|
| T |
7877607 |
tcaatgttatgcggataattaatgaaccaactgctgctgcccttgcatatggccttcaaaagaga |
7877671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 6786925 - 6786816
Alignment:
| Q |
39 |
aatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtggaactt |
138 |
Q |
| |
|
|||||||| |||| || |||||||| |||| ||| | |||||||| |||| |||||| || || ||||| ||||||||||| ||||| || |||||| |
|
|
| T |
6786925 |
aatgaacctactgttgctgctcttgcatatgatctttataagagagcaaattttgttgaaaataggaatatatttatctttgatcttggttgtagaactt |
6786826 |
T |
|
| Q |
139 |
ttgatgtgtc |
148 |
Q |
| |
|
||||| |||| |
|
|
| T |
6786825 |
ttgatatgtc |
6786816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 8590837 - 8590793
Alignment:
| Q |
114 |
atctttgaccttggcggtggaacttttgatgtgtctattctcaca |
158 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
8590837 |
atctttgatcttggtggtggcacttttgatgtgtctcttctcaca |
8590793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 12528798 - 12528558
Alignment:
| Q |
19 |
tcaatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctt |
118 |
Q |
| |
|
||||||| || | ||||||||| ||||| ||||| || |||||||| |||||| |||||||||||||||||||| |||| |||||| |||||||| || |
|
|
| T |
12528798 |
tcaatgtaatacggataatcaacgaaccaactgcagctgctcttgcatatggcattcaaaagagagctaattgtcttgaagagagaaggatttttatttt |
12528699 |
T |
|
| Q |
119 |
tgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaa |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
12528698 |
tgaccttggcggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggagag |
12528599 |
T |
|
| Q |
219 |
gactttgataacataatggtggatcactttgttaaggagtt |
259 |
Q |
| |
|
||||||||||| ||||||| |||||||||| || ||||| |
|
|
| T |
12528598 |
gactttgataatcgaatggtgaatcactttgtgaaagagtt |
12528558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 43745140 - 43745013
Alignment:
| Q |
22 |
atgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgtt-gataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||| || ||| |||| ||||| || |||||||| |||| | ||| || | ||||||||||| ||||||| |
|
|
| T |
43745140 |
atgttatgaagataatcaatgaacccactgctgcagctattgcatatggtctggaaaagagaactaactctgtgcgagga-agaaatattttcatctttg |
43745042 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtct |
149 |
Q |
| |
|
|||| || ||||| ||||||||||||||| |
|
|
| T |
43745041 |
acctgggtggtgggacttttgatgtgtct |
43745013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 15595245 - 15595109
Alignment:
| Q |
102 |
agaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagaca |
201 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||| ||||||||||||||||| || ||| ||||| |||| |||||| |||| |||||||| | |||| ||| |
|
|
| T |
15595245 |
agaaatatttttgtctttgatcttggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaaca |
15595146 |
T |
|
| Q |
202 |
ctcacctaggaggtcaagactttgataacataatggt |
238 |
Q |
| |
|
||||||| ||||| | ||||||||||||| |||||| |
|
|
| T |
15595145 |
ctcaccttggaggagaggactttgataacagaatggt |
15595109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 34466676 - 34466909
Alignment:
| Q |
28 |
tgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttgg |
127 |
Q |
| |
|
|||| |||||||||||||| ||||| || ||| |||| ||||| ||| | ||||||||| | | ||| || | |||||||||| ||||||||||||| |
|
|
| T |
34466676 |
tgcaaataatcaatgaacccactgctgcagctattgcatatggacttgacaagagagctgactttgtggaagaaggaaatattttcgtctttgaccttgg |
34466775 |
T |
|
| Q |
128 |
cggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgat |
227 |
Q |
| |
|
||||| ||||||||||||||| | || ||| ||||| | |||||||| ||||| ||||||||| | || |||||||||| ||| | | ||||||||| |
|
|
| T |
34466776 |
tggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggacgagaggactttgat |
34466875 |
T |
|
| Q |
228 |
aacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
|| | ||||| | | ||||||| |||||||||| |
|
|
| T |
34466876 |
aatagaatggcgaaccactttgcaaaggagttca |
34466909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 261
Target Start/End: Original strand, 4678516 - 4678674
Alignment:
| Q |
103 |
gaaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacac |
202 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||| ||||||||||||||||| || | | | ||| |||||| ||||| || |||||||| ||| |||| |
|
|
| T |
4678516 |
gaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacac |
4678615 |
T |
|
| Q |
203 |
tcacctaggaggtcaagactttgataacataatggtggatcactttgttaaggagttca |
261 |
Q |
| |
|
||||||||| || | ||||||||||||| ||||||| | ||||||| ||||||||| |
|
|
| T |
4678616 |
tcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttca |
4678674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 34 - 206
Target Start/End: Complemental strand, 11999673 - 11999501
Alignment:
| Q |
34 |
taatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtgg |
133 |
Q |
| |
|
|||| |||||||| ||||| || || |||| ||||||||| | ||||||||| ||||||||| | ||||| ||||| ||||||| ||||||||||| |
|
|
| T |
11999673 |
taatgaatgaacccactgctgcaactgttgcatatggccttgacaagagagctgattgtgttggagaaagaaacattttagtctttgatcttggcggtgg |
11999574 |
T |
|
| Q |
134 |
aacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcac |
206 |
Q |
| |
|
||||||||| ||||||| || ||| ||||| ||||||||||| |||| |||||||| || ||| |||||||| |
|
|
| T |
11999573 |
cacttttgatttgtctatactaacaattaaggacaatgtcttccaagttaaggccacagctggaaacactcac |
11999501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 227
Target Start/End: Complemental strand, 43625691 - 43625498
Alignment:
| Q |
34 |
taatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtgg |
133 |
Q |
| |
|
||||||||||||| || || || ||||| || || |||||| | |||||| ||||||||||| | |||||||||| |||||||||||||| ||||| |
|
|
| T |
43625691 |
taatcaatgaaccaacagctgctgctctagcatacggccttaacaagagaattaattgtgttggagaacgaaatattttcatctttgaccttggtggtgg |
43625592 |
T |
|
| Q |
134 |
aacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgat |
227 |
Q |
| |
|
||||||||||||||||| || ||| ||||| |||| |||||| || || |||||||| ||| |||||||||| ||||| | ||||||||| |
|
|
| T |
43625591 |
tacttttgatgtgtctatacttacaattaaggacaaggtcttccgtgttaaagccactgctggaaacactcaccttggaggagaggactttgat |
43625498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 16661879 - 16662083
Alignment:
| Q |
32 |
gataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggt |
131 |
Q |
| |
|
||||||||||||||| ||||| || ||| |||| ||||||||| | || ||| |||||||| || | | |||||||||||| ||||||| ||||| ||| |
|
|
| T |
16661879 |
gataatcaatgaacccactgcagcagctattgcatatggccttgacaaaagaagtaattgtgatggtgaaagaaatatttttgtctttgatcttggtggt |
16661978 |
T |
|
| Q |
132 |
ggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataaca |
231 |
Q |
| |
|
|| ||||||||||||||| | |||||| |||| ||||||| ||||| || |||||| | ||| |||||||||| || || | ||||||||||||| |
|
|
| T |
16661979 |
gggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggactttgataaca |
16662078 |
T |
|
| Q |
232 |
taatg |
236 |
Q |
| |
|
|||| |
|
|
| T |
16662079 |
gaatg |
16662083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 36 - 231
Target Start/End: Original strand, 16657408 - 16657603
Alignment:
| Q |
36 |
atcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtggaa |
135 |
Q |
| |
|
||||||||||| ||||| || ||| |||| ||||| ||| | |||||| | |||||| || ||| | ||||||||| ||||||||||||||||||| | |
|
|
| T |
16657408 |
atcaatgaacctactgctgcagctattgcatatggtcttgacaagagaagtgattgtgatggtaaacggaatatttttgtctttgaccttggcggtggta |
16657507 |
T |
|
| Q |
136 |
cttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataaca |
231 |
Q |
| |
|
|||||||||||||||| || ||| ||||| |||| || || || || |||||||||||| |||||||||| || || | ||||||||||||| |
|
|
| T |
16657508 |
cttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgggggagaggactttgataaca |
16657603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 12245295 - 12245475
Alignment:
| Q |
34 |
taatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtgg |
133 |
Q |
| |
|
|||| |||||||| ||||| || ||| |||| ||||||||| ||||||||||| ||||||||| | ||||| |||||| | ||||| ||||| ||||| |
|
|
| T |
12245295 |
taatgaatgaacccactgctgcagctgttgcatatggccttgaaaagagagctgattgtgttggagaaagaaacatttttgtgtttgatcttggtggtgg |
12245394 |
T |
|
| Q |
134 |
aacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggagg |
214 |
Q |
| |
|
|||||||| || ||||| || || ||||| | || ||||| |||| ||||||||||| ||| |||||||||| ||||| |
|
|
| T |
12245395 |
cacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcaccttggagg |
12245475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 301
Target Start/End: Complemental strand, 7542500 - 7542238
Alignment:
| Q |
39 |
aatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtggaactt |
138 |
Q |
| |
|
|||||||| ||||| || ||| |||| ||||||||| | |||||| || ||| || || || ||||||||||| | ||||| ||||||||||| |||| |
|
|
| T |
7542500 |
aatgaacctactgccgcagctgttgcatatggccttgacaagagaactgattatgatggagagcgaaatatttttgtttttgatcttggcggtggcactt |
7542401 |
T |
|
| Q |
139 |
ttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaagactttgataacataatggt |
238 |
Q |
| |
|
||||||||||| | || || ||||| ||| |||| |||| ||||||||||| || |||||||||| || || ||||||||||||| | ||||| |
|
|
| T |
7542400 |
ttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacactcaccttggtggagaagactttgataatagaatggc |
7542301 |
T |
|
| Q |
239 |
ggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagc |
301 |
Q |
| |
|
| | ||||||| | ||||||| || ||| |||||| ||| ||||||| |||| ||||||| |
|
|
| T |
7542300 |
gaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagc |
7542238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 12258457 - 12258675
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
||||| ||| ||||| | |||||||| ||||| || ||| |||| ||||||||| | || ||| ||||||||| || || | ||||||||| |||||| |
|
|
| T |
12258457 |
aatgttatgaagatattaaatgaacctactgctgcagcttttgcatatggccttgacaaaagaattaattgtgtcgaaaaacggaatatttttgtctttg |
12258556 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| ||||| ||||| ||||||||||||||| | || || ||||| | |||||||| |||| ||||| || || ||| |||| ||||| ||||| | || |
|
|
| T |
12258557 |
atcttggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgcaccttggaggagagga |
12258656 |
T |
|
| Q |
221 |
ctttgataacataatggtg |
239 |
Q |
| |
|
||||||||| | ||||||| |
|
|
| T |
12258657 |
ctttgataatagaatggtg |
12258675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 104 - 301
Target Start/End: Complemental strand, 35132657 - 35132460
Alignment:
| Q |
104 |
aaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacact |
203 |
Q |
| |
|
|||||||||| |||| || ||||| ||||| ||||||||||| || || || || ||||| | ||||||||| |||| ||||||||||||||| ||||| |
|
|
| T |
35132657 |
aaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaacact |
35132558 |
T |
|
| Q |
204 |
cacctaggaggtcaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagc |
301 |
Q |
| |
|
|| || || || | ||||||||||||| ||||||| | ||||||| | ||||||| || ||| |||||| || ||||||| |||||||||||| |
|
|
| T |
35132557 |
catctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgggaattcaaaagc |
35132460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 9335767 - 9335984
Alignment:
| Q |
21 |
aatgtcatgcagataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttg |
120 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||| || ||| |||| ||||||||| | |||||| | | |||| || ||| ||||||||||| |||||| |
|
|
| T |
9335767 |
aatgtcattcggataatcaatgaacctactgctgcagctattgcatatggccttgataagagaaatgactgtgatggtaaccgaaatatttttgtctttg |
9335866 |
T |
|
| Q |
121 |
accttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacactcacctaggaggtcaaga |
220 |
Q |
| |
|
| || || || || ||||||||||||||||| |||||| ||||| || | || ||||| || ||||| || ||| |||| ||||| ||||| | || |
|
|
| T |
9335867 |
atctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttggaggcgagga |
9335966 |
T |
|
| Q |
221 |
ctttgataacataatggt |
238 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
9335967 |
ctttgataacagaatggt |
9335984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 30775532 - 30775408
Alignment:
| Q |
33 |
ataatcaatgaaccgactgcggcggctcttgcgtatggccttcaaaagagagctaattgtgttgataagagaaatatttttatctttgaccttggcggtg |
132 |
Q |
| |
|
||||| ||||| || ||||| || ||| |||| ||||| ||| | ||||||| || |||| || | |||| ||||||||| ||||||| ||||| |||| |
|
|
| T |
30775532 |
ataattaatgagcccactgcagcagctattgcatatggacttgagaagagaggtaggtgtgatgctgagaggaatatttttgtctttgatcttggtggtg |
30775433 |
T |
|
| Q |
133 |
gaacttttgatgtgtctattctcac |
157 |
Q |
| |
|
| ||||||||||||||| ||||||| |
|
|
| T |
30775432 |
ggacttttgatgtgtctcttctcac |
30775408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 28220161 - 28220115
Alignment:
| Q |
103 |
gaaatatttttatctttgaccttggcggtggaacttttgatgtgtct |
149 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| ||||||||||||||| |
|
|
| T |
28220161 |
gaaatattttcatctttgacctgggtggtgggacttttgatgtgtct |
28220115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 11133121 - 11133068
Alignment:
| Q |
186 |
gccactgccggagacactcacctaggaggtcaagactttgataacataatggtg |
239 |
Q |
| |
|
|||||||| ||||| |||||||| || || |||||||||||||||| ||||||| |
|
|
| T |
11133121 |
gccactgctggagatactcacctcgggggacaagactttgataacacaatggtg |
11133068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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