View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11506_low_7 (Length: 259)
Name: NF11506_low_7
Description: NF11506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11506_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 41454096 - 41453860
Alignment:
| Q |
16 |
cagtgttaaatctcttcatcgaagtcatatatctgactcacatgattaatctttatagttgcgtgcagagtatactcggttcacaccaaaaacaacaaaa |
115 |
Q |
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| T |
41454096 |
cagtgttaaatctcttcatcggagtcatatatctgactcacgtgattaatttttgtagttgcgtgcagagtatactcggttcacaccaaaaacaacaaaa |
41453997 |
T |
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| Q |
116 |
tataatgatatctcattctattgaatttcatcattttctctgaatccaaaactgcagccatatatctatatatctctgcatgttattgatattgacactt |
215 |
Q |
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| T |
41453996 |
tctaatgatatatcattctattgaatttcatcattttctctgaatccaaaactgcagccatatatctatatatctctgcatgttattgatattgacactt |
41453897 |
T |
|
| Q |
216 |
attatcaagtccaataagttcctctagctctctgctt |
252 |
Q |
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| T |
41453896 |
attatcaagtccaataagttcctctagctctttgctt |
41453860 |
T |
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