View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11507_high_5 (Length: 360)
Name: NF11507_high_5
Description: NF11507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11507_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 18021584 - 18021464
Alignment:
| Q |
83 |
tattcattatcgcatttcactattctttctttgcgatagctagttaggggtaattttgagaaaacaatatttaatatattttgaactttgaaaatgacaa |
182 |
Q |
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| T |
18021584 |
tattcattatcgcatttcactattctttctttgcgataggtggttaggggtaattttgagaaaacaatatttaatatattttgaactttgaaaatgacaa |
18021485 |
T |
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| Q |
183 |
ttagaaaagaacaaaaatatt |
203 |
Q |
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| T |
18021484 |
ttaaaaaagaacaaaaatatt |
18021464 |
T |
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