View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11508_high_7 (Length: 279)

Name: NF11508_high_7
Description: NF11508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11508_high_7
NF11508_high_7
[»] scaffold0057 (1 HSPs)
scaffold0057 (37-127)||(20579-20669)
[»] chr1 (21 HSPs)
chr1 (37-125)||(1367290-1367378)
chr1 (37-126)||(17364603-17364692)
chr1 (37-126)||(33359698-33359787)
chr1 (37-125)||(4890097-4890185)
chr1 (37-125)||(29188300-29188388)
chr1 (54-124)||(33075673-33075743)
chr1 (37-126)||(52306067-52306156)
chr1 (54-125)||(22198924-22198995)
chr1 (54-127)||(29844898-29844971)
chr1 (37-126)||(47134702-47134791)
chr1 (37-125)||(16300388-16300476)
chr1 (54-125)||(1826792-1826863)
chr1 (37-122)||(46626324-46626409)
chr1 (54-117)||(10766193-10766256)
chr1 (55-126)||(19322362-19322433)
chr1 (54-125)||(38894754-38894825)
chr1 (58-124)||(42678374-42678440)
chr1 (49-125)||(10698130-10698206)
chr1 (54-91)||(28570758-28570795)
chr1 (50-102)||(5426238-5426290)
chr1 (54-122)||(43116050-43116118)
[»] chr2 (14 HSPs)
chr2 (37-123)||(9545775-9545861)
chr2 (37-122)||(2952759-2952844)
chr2 (37-124)||(4292782-4292869)
chr2 (37-125)||(10050189-10050277)
chr2 (54-127)||(17836964-17837037)
chr2 (50-127)||(28607218-28607295)
chr2 (54-125)||(32677200-32677271)
chr2 (50-120)||(18096495-18096565)
chr2 (54-127)||(9920926-9920999)
chr2 (37-127)||(24520863-24520953)
chr2 (37-108)||(19486205-19486276)
chr2 (37-126)||(10876571-10876658)
chr2 (37-118)||(19486111-19486192)
chr2 (37-108)||(42781027-42781098)
[»] chr6 (11 HSPs)
chr6 (37-125)||(1218517-1218605)
chr6 (37-125)||(24443926-24444014)
chr6 (37-125)||(18323834-18323922)
chr6 (50-127)||(15045559-15045636)
chr6 (54-122)||(4897511-4897579)
chr6 (50-125)||(6969308-6969383)
chr6 (37-125)||(9737752-9737840)
chr6 (50-126)||(28573841-28573917)
chr6 (50-125)||(4107953-4108028)
chr6 (51-114)||(9981273-9981336)
chr6 (55-101)||(33328295-33328341)
[»] chr5 (16 HSPs)
chr5 (37-125)||(41689274-41689362)
chr5 (37-124)||(25698717-25698804)
chr5 (37-125)||(30140501-30140589)
chr5 (37-125)||(34715602-34715683)
chr5 (37-124)||(3088031-3088118)
chr5 (37-108)||(30754425-30754496)
chr5 (37-124)||(33709813-33709900)
chr5 (54-125)||(36886985-36887056)
chr5 (54-130)||(12592485-12592561)
chr5 (37-127)||(17643385-17643475)
chr5 (54-101)||(12422361-12422408)
chr5 (65-124)||(26602196-26602255)
chr5 (54-91)||(6305466-6305503)
chr5 (54-91)||(43138563-43138600)
chr5 (54-88)||(42977849-42977883)
chr5 (54-91)||(754461-754498)
[»] chr4 (32 HSPs)
chr4 (37-125)||(39716717-39716805)
chr4 (37-120)||(52799029-52799112)
chr4 (124-191)||(23204618-23204685)
chr4 (37-125)||(3821198-3821286)
chr4 (189-261)||(23204875-23204947)
chr4 (57-126)||(24948306-24948375)
chr4 (54-125)||(29712368-29712440)
chr4 (54-126)||(35716315-35716387)
chr4 (37-120)||(15704115-15704198)
chr4 (54-125)||(51347487-51347558)
chr4 (54-125)||(53991568-53991639)
chr4 (54-127)||(39406248-39406321)
chr4 (37-125)||(3757725-3757813)
chr4 (37-125)||(50119957-50120045)
chr4 (37-122)||(13171627-13171712)
chr4 (71-124)||(47560252-47560305)
chr4 (50-102)||(5752473-5752525)
chr4 (37-109)||(30529278-30529350)
chr4 (37-125)||(36743201-36743289)
chr4 (50-125)||(12682768-12682843)
chr4 (54-125)||(20588561-20588632)
chr4 (37-108)||(24547347-24547418)
chr4 (37-124)||(35498532-35498619)
chr4 (54-108)||(17730449-17730503)
chr4 (54-127)||(578621-578694)
chr4 (54-125)||(43021891-43021962)
chr4 (54-91)||(8956949-8956986)
chr4 (54-91)||(8986921-8986958)
chr4 (54-91)||(37349819-37349856)
chr4 (54-102)||(35833430-35833478)
chr4 (50-102)||(46104201-46104253)
chr4 (54-91)||(9888906-9888943)
[»] chr7 (20 HSPs)
chr7 (37-131)||(17169017-17169111)
chr7 (37-125)||(48529933-48530021)
chr7 (37-124)||(39651148-39651235)
chr7 (37-125)||(21600970-21601058)
chr7 (37-124)||(11840447-11840534)
chr7 (54-124)||(29467751-29467821)
chr7 (54-125)||(3791478-3791549)
chr7 (50-125)||(39276612-39276687)
chr7 (37-102)||(31899985-31900050)
chr7 (50-125)||(688062-688137)
chr7 (50-124)||(21670805-21670879)
chr7 (54-124)||(44804520-44804590)
chr7 (50-125)||(9143472-9143550)
chr7 (50-125)||(49146135-49146211)
chr7 (37-108)||(34872185-34872256)
chr7 (54-108)||(35157012-35157066)
chr7 (54-119)||(29684130-29684195)
chr7 (37-125)||(27737741-27737829)
chr7 (50-125)||(4848347-4848422)
chr7 (54-91)||(24684650-24684687)
[»] chr8 (18 HSPs)
chr8 (37-124)||(18378802-18378889)
chr8 (37-125)||(36776403-36776491)
chr8 (37-126)||(24053912-24054001)
chr8 (51-126)||(41152666-41152743)
chr8 (37-108)||(25346050-25346121)
chr8 (54-108)||(40587709-40587763)
chr8 (54-103)||(41972977-41973026)
chr8 (54-91)||(8760734-8760771)
chr8 (54-91)||(25836282-25836319)
chr8 (54-126)||(19243233-19243305)
chr8 (54-126)||(19316417-19316489)
chr8 (50-89)||(25620727-25620766)
chr8 (54-91)||(1942822-1942859)
chr8 (54-91)||(8162792-8162829)
chr8 (54-91)||(32844182-32844219)
chr8 (54-91)||(45435023-45435060)
chr8 (50-102)||(7389220-7389272)
chr8 (50-102)||(25616511-25616563)
[»] scaffold0069 (1 HSPs)
scaffold0069 (39-129)||(11768-11858)
[»] scaffold0009 (2 HSPs)
scaffold0009 (50-126)||(225433-225509)
scaffold0009 (54-122)||(108549-108617)
[»] scaffold0385 (1 HSPs)
scaffold0385 (54-120)||(8317-8383)
[»] chr3 (19 HSPs)
chr3 (37-127)||(22519187-22519276)
chr3 (54-127)||(22473641-22473714)
chr3 (50-126)||(8393561-8393637)
chr3 (54-122)||(11955542-11955610)
chr3 (37-125)||(29530561-29530649)
chr3 (54-108)||(35855220-35855274)
chr3 (54-127)||(26102167-26102240)
chr3 (37-125)||(8528103-8528191)
chr3 (50-102)||(18682511-18682563)
chr3 (37-109)||(19368941-19369013)
chr3 (50-125)||(4139360-4139435)
chr3 (37-124)||(19895645-19895732)
chr3 (42-124)||(33872205-33872287)
chr3 (50-89)||(26777863-26777902)
chr3 (54-101)||(28981834-28981881)
chr3 (37-108)||(55297343-55297414)
chr3 (60-126)||(11602187-11602253)
chr3 (50-122)||(9563228-9563300)
chr3 (50-102)||(53800521-53800573)
[»] scaffold0051 (1 HSPs)
scaffold0051 (50-129)||(62057-62136)
[»] scaffold0759 (1 HSPs)
scaffold0759 (50-125)||(5904-5979)
[»] scaffold0381 (1 HSPs)
scaffold0381 (54-91)||(9602-9639)


Alignment Details
Target: scaffold0057 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 20579 - 20669
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20579 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagatat 20669  T

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Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 1367378 - 1367290
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1367378 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 1367290  T

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Target: chr1; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 17364603 - 17364692
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  17364603 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggatatttcttttaatataagtatatagata 17364692  T

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Target: chr1; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 33359787 - 33359698
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33359787 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagata 33359698  T

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Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 4890185 - 4890097
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4890185 ctcagccaataattaatttaccaaattgcccctaatagaggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 4890097  T

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Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 29188300 - 29188388
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29188300 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 29188388  T

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Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 33075673 - 33075743
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  33075673 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 33075743  T

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Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 52306156 - 52306067
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||| ||||| | ||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  52306156 ctcaaccaattagtaatttatcaaattgccccttataggggcaaaatggtaaattaaagggatatttctttttatataagtatatagata 52306067  T

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Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 22198924 - 22198995
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  22198924 ttaccaaattgccccttataggggcaaaatgataaattcaagggacatttcttttaatataagtatatagat 22198995  T

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Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 29844898 - 29844971
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||||| ||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  29844898 ttaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatatagatat 29844971  T

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Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 47134791 - 47134702
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| || ||||||| | ||| |||||||||||||||||    
T  47134791 ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaatggacattaccttttatataagtatatagata 47134702  T

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Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 16300476 - 16300388
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | |||||||||||||||||||| ||||| ||||||||||||||| || |||||||  |||||||||||||||||||||    
T  16300476 ctcaaccaattagtaatttaccaaattgccccttataggagcaaaatggtaaattcaagggacattaattttaatataagtatatagat 16300388  T

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Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 1826863 - 1826792
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| |||| | |||||||||||||| || ||||||| ||||||||||||||||||||||    
T  1826863 ttaccaaattgccccttatagagccaaaatggtaaattcaagggacattacttttaatataagtatatagat 1826792  T

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Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 46626324 - 46626409
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||| ||||||||    
T  46626324 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatata 46626409  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 10766256 - 10766193
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagt 117  Q
    ||||||||||| |||| ||||||||||||||||||||  | |||||||||||||||||||||||    
T  10766256 ttaccaaattgacccttataggggcaaaatggtaaatccataggacatttcttttaatataagt 10766193  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 19322362 - 19322433
Alignment:
Q  55 taccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||| ||||  ||| ||||||||||||    
T  19322362 taccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatatagata 19322433  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 38894825 - 38894754
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||  |||  ||| |||||||||||    
T  38894825 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttactttcttattagtatatagat 38894754  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 42678440 - 42678374
Alignment:
Q  58 caaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||||||||||| ||||||  ||||||||||||| |  ||||||||||||| |||||||||||||||    
T  42678440 caaattgccccttatagggataaaatggtaaattcatgggacatttctttttatataagtatataga 42678374  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 10698130 - 10698206
Alignment:
Q  49 ttaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||| |||||||  |||||||||||||||||||| |  ||||||||||||| || | || ||||||||    
T  10698130 ttaatttaccaaaatgccccttctaggggcaaaatggtaaatttattggacatttctttttatgttagcatatagat 10698206  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 28570795 - 28570758
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  28570795 ttaccaaattgacccttataggggcaaaatggtaaatt 28570758  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 5426290 - 5426238
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    ||||||||||||||||||||  || ||||||||||||||| | || |||||||    
T  5426290 taatttaccaaattgccccttctaagggcaaaatggtaaaatcaatggacatt 5426238  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 43116118 - 43116050
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    ||||||||||||||||  |||||||||||| | ||||| || |||||| | |||| |||| ||||||||    
T  43116118 ttaccaaattgcccctcctaggggcaaaattggaaattcaatggacatgtatttttatattagtatata 43116050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 9545775 - 9545861
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatag 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9545775 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatag 9545861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 2952844 - 2952759
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2952844 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatata 2952759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 4292782 - 4292869
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4292782 ctcagccaataattaatttaccaaattgcccttaataggagcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 4292869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 10050189 - 10050277
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10050189 ctcaaccaattagtaatttatcaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 10050277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 17837037 - 17836964
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  17837037 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatatatat 17836964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 28607295 - 28607218
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||||||||| |||||| |||||||||||||| || |||||||| |||||||||||||||||||||||    
T  28607295 taatttaccaaattgccccttatagggacaaaatggtaaattcaatggacatttattttaatataagtatatagatat 28607218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 32677200 - 32677271
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  32677200 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttaatataagtatatagat 32677271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 18096565 - 18096495
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtata 120  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  18096565 taatttgccaaattaccccttataggggcaaaatggtaaattcaaaggacatttctttttatataagtata 18096495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 9920926 - 9920999
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||||| ||||||||||||||||||||  |  ||||||||||||||||||||||||||| ||||    
T  9920926 ttaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatatatatat 9920999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 24520953 - 24520863
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||| ||||| | |||||||||||||||| ||| |||| ||||||||  |||||| || ||||||||||||| ||||||||||||||||||    
T  24520953 ctcaaccaattagtaatttaccaaattgctccttatagaggcaaaattataaattcaagggacatttctttttatataagtatatagatat 24520863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 19486276 - 19486205
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  19486276 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttctttt 19486205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 10876571 - 10876658
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||| ||||||| ||  ||||||||||||||||  |||||||||||||||||||| || |||||||||||||  ||| ||||||||||||    
T  10876571 ctcaaccaataagtagattaccaaattgcccct--taggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagata 10876658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 19486111 - 19486192
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagta 118  Q
    |||| ||||||| ||  |||||||||||||||| |||||||||||||| |||||| || ||| ||||  ||| |||||||||    
T  19486111 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatgataaattcaatggatattttcttttatataagta 19486192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 42781098 - 42781027
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| | |||| ||||||| |||||| || |||||||||||||    
T  42781098 ctcaaccaataaatagattaccaaattgccccttacagggacaaaatgataaattcaagggacatttctttt 42781027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 1218605 - 1218517
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1218605 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 1218517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 24444014 - 24443926
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  24444014 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggatatttcttttaatataagtatatagat 24443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 18323922 - 18323834
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18323922 ctcagccaataattaatttaccaaattgcttttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 18323834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 15045559 - 15045636
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||| ||| | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15045559 taatttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagatat 15045636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 4897511 - 4897579
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  4897511 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatata 4897579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 6969308 - 6969383
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||   ||| |||| |||||||||||    
T  6969308 taatttaccaaattgccccttataggggcaaaatggtaaattcaagggacattaacttttatattagtatatagat 6969383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 9737752 - 9737840
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  ||| |||||||||||| |||||| |||||||||||||| || |||||||||||||  ||| |||||||||||    
T  9737752 ctcaaccaataaatagattatcaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatatagat 9737840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 28573841 - 28573917
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    ||||||||||||||||||||  |||||||||||||||||| | |||||| |||   ||| |||| ||||||||||||    
T  28573841 taatttaccaaattgcccctcctaggggcaaaatggtaaaatcaaaggatattaacttttatatcagtatatagata 28573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 4108028 - 4107953
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||| ||||||||||| | || |||||||   ||| |||| |||||||||||    
T  4108028 taatttaccaaattgcccctcataggggaaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4107953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 9981273 - 9981336
Alignment:
Q  51 aatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatata 114  Q
    ||||||||||||||||||| ||||||| ||||||||||||| || | ||||||| ||| |||||    
T  9981273 aatttaccaaattgccccttataggggtaaaatggtaaattcaatgaacatttccttttatata 9981336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 33328295 - 33328341
Alignment:
Q  55 taccaaattgcccctaataggggcaaaatggtaaattaaaaggacat 101  Q
    |||||||||||||||  |||| ||||||||||||||| |||||||||    
T  33328295 taccaaattgccccttgtaggagcaaaatggtaaatttaaaggacat 33328341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 41689362 - 41689274
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41689362 ctcagccaataattaatttaccaaattgcccataataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 41689274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 25698717 - 25698804
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25698717 ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 25698804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 30140589 - 30140501
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30140589 ctcaaccaattagtaatttaccaaattacccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 30140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 34715683 - 34715602
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  34715683 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggt-------aaggacatttcttttaatataagtatatagat 34715602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 3088031 - 3088118
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  3088031 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 3088118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 30754496 - 30754425
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  30754496 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaaaggacatttctttt 30754425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 33709813 - 33709900
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | |||||||||||||||||| | ||||||| ||||||||||||| || |||||||  ||||||||||||||||||||    
T  33709813 ctcaaccaattactaatttaccaaattgccctttataggggtaaaatggtaaattcaagggacattaattttaatataagtatataga 33709900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 36886985 - 36887056
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||| |||||||||||    
T  36886985 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 36887056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 12592485 - 12592561
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatatgat 130  Q
    |||||||||||||||| ||||||| ||| ||||||||| |  ||||||||||||| |||||||||||||||| ||||    
T  12592485 ttaccaaattgccccttataggggtaaactggtaaattcatgggacatttctttttatataagtatatagatgtgat 12592561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 17643385 - 17643475
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||| ||||||| ||  |||||||||||||||| ||| |||||||||| |||||| || |||||||| ||||  ||| |||||||||||||    
T  17643385 ctcaaccaataaatagattaccaaattgccccttataagggcaaaatgataaattcaagggacatttattttcttattagtatatagatat 17643475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 12422361 - 12422408
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacat 101  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  12422361 ttaccaaattgccccttataggggcaaaatggtaaaatcaaaggacat 12422408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 26602196 - 26602255
Alignment:
Q  65 cccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    ||||| ||| ||| ||||||||||||| || ||||||||||||| |||||||||||||||    
T  26602196 ccccttataagggtaaaatggtaaattcaagggacatttctttttatataagtatataga 26602255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 6305466 - 6305503
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6305466 ttaccaaattgccccttataggggcaaaatggtaaatt 6305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 43138563 - 43138600
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  43138563 ttaccaaattgccccttataggggcaaaatggtaaatt 43138600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 42977849 - 42977883
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaa 88  Q
    |||||||||||||||| ||||||||||||||||||    
T  42977849 ttaccaaattgccccttataggggcaaaatggtaa 42977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 754461 - 754498
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  754461 ttaccaaattgacccttataggggcaaaatggtaaatt 754498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 39716717 - 39716805
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39716717 ctcaaccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatagat 39716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 52799112 - 52799029
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtata 120  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  52799112 ctcagccaataattaatttaccaaattgcccctaataggggtaaaatggtaaatttaaaggacatttcttttaatataagtata 52799029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 23204618 - 23204685
Alignment:
Q  124 atatgatccacatctttatacgcgtgattatatatataaaaatccaggcttgaattcactagaagtat 191  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23204618 atatgacccacatctttatacgcgtgattatatatataaaaatccaggcttgaattcactagaagtat 23204685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 3821198 - 3821286
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  3821198 ctcaaccaattagtaatttaccaaattgccccttataggggcaaaatggtaaattcaagggacattacttttaatataagtatatagat 3821286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 23204875 - 23204947
Alignment:
Q  189 tatacccaaaggttcacacaggaaaaacaatattaggtttcaattcaaagtaggagtaactaagtatcacatc 261  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  23204875 tatacccaaaggttcacacatgaaaagcaatattaggtttcaattcaaagtagaagtaactaaatatcacatc 23204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 24948306 - 24948375
Alignment:
Q  57 ccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  24948306 ccaaattgccccttataggagcaaaatggtaaattcaaaggacatttctttttatataagtatatagata 24948375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 29712440 - 29712368
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttc-ttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  29712440 ttaccaaattgccccttataggggcaaaatggtaaatttaagggacatttctttttaatataagtatatagat 29712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 35716315 - 35716387
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||||| ||||||||||||||||||||  |  | |||||||||||||||||||||||||||||    
T  35716315 ttaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagata 35716387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 15704198 - 15704115
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtata 120  Q
    |||| ||||| | |||||||||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||| |||||||||||    
T  15704198 ctcaaccaattagtaatttaccaaatttccccttataggggcaaaatggtaaatttaaagaacattactttttatataagtata 15704115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 51347558 - 51347487
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||| |||||||||||    
T  51347558 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 51347487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 53991568 - 53991639
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||  |  | ||||||||||||||||||||||||||||    
T  53991568 ttaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagat 53991639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 39406248 - 39406321
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||| ||||| |||||||| |||||||||||| || | ||||||||||| ||||||||||||||||||    
T  39406248 ttaccaaattaccccttataggggctaaatggtaaattcaaggaacatttctttttatataagtatatagatat 39406321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 3757813 - 3757725
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || | |||||||||||  ||| |||||||||||    
T  3757813 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaatgaacatttcttttcttattagtatatagat 3757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 50119957 - 50120045
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || ||||||| |||||  ||| |||||||||||    
T  50119957 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacattccttttcttattagtatatagat 50120045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 13171712 - 13171627
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || |||||||| ||||  ||| ||||||||    
T  13171712 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttattttcttattagtatata 13171627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 47560252 - 47560305
Alignment:
Q  71 ataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  47560252 ataggggcaaaatggtaaattcaagggacattacttttaatataagtatataga 47560305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 5752525 - 5752473
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  5752525 taatttaccaaattgccccttataggggcaaaatggtaaattcaagggacatt 5752473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 30529278 - 30529350
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttta 109  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||    
T  30529278 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggatatttctttta 30529350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 36743201 - 36743289
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| |||| | |||||||||||||| || |||||||||||||  ||| |||||||||||    
T  36743201 ctcaaccaataagtagattaccaaattgccccttatagagacaaaatggtaaatttaagggacatttcttttcttattagtatatagat 36743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 12682768 - 12682843
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||| | || |||||||   ||| |||| |||||||||||    
T  12682768 taatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagat 12682843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 20588632 - 20588561
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| |||| ||||||||||| |||| || |||||||||||||  ||| |||||||||||    
T  20588632 ttaccaaattgccccttatagaggcaaaatggtgaattcaagggacatttcttttcttattagtatatagat 20588561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 24547418 - 24547347
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| |||||| |||||||||||||| || |||||||||||||    
T  24547418 ctcaaccaataaatagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttctttt 24547347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 35498532 - 35498619
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | ||||||||||||||| || | |||||||||||||| |||||| || || |||||||||| |||| ||||||||||    
T  35498532 ctcaaccaattagtaatttaccaaattgtcctttataggggcaaaatgataaattcaagggccatttctttttatattagtatataga 35498619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 17730503 - 17730449
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||    
T  17730503 ttaccaaattgccccttataggagcaaaatggtaaattcaaagcacatttctttt 17730449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 578621 - 578694
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    ||||||||||| |||| |||||||||||||||||||| ||   ||||||||||||||||||  |||||| ||||    
T  578621 ttaccaaattgtcccttataggggcaaaatggtaaatcaatgagacatttcttttaatatatatatatatatat 578694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 43021962 - 43021891
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||| |||||||| ||||| |||||||||| || | |||||||||||  ||| |||||||||||    
T  43021962 ttaccaaattgcacctaatagaggcaagatggtaaattcaaggaacatttcttttcttattagtatatagat 43021891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 8956986 - 8956949
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8956986 ttaccaaattgccccttataggggcaaaatggtaaatt 8956949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 8986958 - 8986921
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8986958 ttaccaaattgccccttataggggcaaaatggtaaatt 8986921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 37349856 - 37349819
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  37349856 ttaccaaattgccccttataggggcaaaatggtaaatt 37349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 35833430 - 35833478
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    |||||||||||||||| ||||||||||||||||||| | || |||||||    
T  35833430 ttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacatt 35833478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 46104253 - 46104201
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    |||||||||||||||||||| || |||||||||||||||| | || |||||||    
T  46104253 taatttaccaaattgcccctcattggggcaaaatggtaaaatcaatggacatt 46104201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 9888906 - 9888943
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  9888906 ttaccaaattgacccttataggggcaaaatggtaaatt 9888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 17169111 - 17169017
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatatgatc 131  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  17169111 ctcagccaataattaatttaccaaattgcccttaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatatatagatgatc 17169017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 48529933 - 48530021
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  48529933 ctcagccaataattaatttaccaaattgcccccaataggggcaaaatggtaatttcaaaggacatttcttttaatataagtatatagat 48530021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 39651148 - 39651235
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39651148 ctcaaccaattagtaatttaccaaattgcccctaataggggcaaaatggtaaattcaaaggacatttcttttaatataagtatataga 39651235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 21600970 - 21601058
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||    
T  21600970 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatagaagtatatagat 21601058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 11840447 - 11840534
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| |||||||||||    
T  11840447 ctcaaccaattaataatttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatagaagtatataga 11840534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 29467821 - 29467751
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  29467821 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatataga 29467751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 3791549 - 3791478
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  3791549 ttaccaaattgccccttataggggcaaaatggtaaatccataggacatttcttttaatataagtatatagat 3791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 39276687 - 39276612
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||| ||| | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  39276687 taatttaccaaattaccctttataggggcaaaatggtaaattcaagggacatttcttttaatataagtatatagat 39276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 31899985 - 31900050
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31899985 ctcagccaataattaatctaccaaattgcccctaataggggcaaaattgtaaattcaaaggacatt 31900050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 688137 - 688062
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||   ||| |||| |||||||||||    
T  688137 taatttaccaaattgccccttataggggcaaaatggtaaattcaaaggacattaacttttatattagtatatagat 688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 21670805 - 21670879
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    ||||||||||||||  || | ||||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  21670805 taatttaccaaattatcctttataggggcaaaatagtaaattcaagggacatttcttttaatataagtatataga 21670879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 44804590 - 44804520
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||||||||||||||| |||||| |||||||||||||| || |||||||||||||  ||| ||||||||||    
T  44804590 ttaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatataga 44804520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 9143550 - 9143472
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaagga---catttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||    ||||||||| |||| |||||||||||    
T  9143550 taatttaccaaattgccccttataggggcaaaatggtaaattcaagggatattatttctttttatattagtatatagat 9143472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 49146135 - 49146211
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt-tcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||| | || |||||||  ||||| |||| |||||||||||    
T  49146135 taatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaactttttatattagtatatagat 49146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 34872256 - 34872185
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| |||||| ||||||||||| || ||||||||||||||||    
T  34872256 ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaagttcaaaggacatttctttt 34872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 35157012 - 35157066
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||    
T  35157012 ttaccaaattgccccttataggggcaaaatggtaaattcaagtgacatttctttt 35157066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 29684130 - 29684195
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtat 119  Q
    |||||||||||||||| ||||||| ||||||||||||| || | ||||||||||| |||| |||||    
T  29684130 ttaccaaattgccccttataggggtaaaatggtaaattcaaggcacatttctttttatattagtat 29684195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 27737741 - 27737829
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||| | ||||||||||||||  || | ||||||| ||||||||||||| || |||| |||||||| ||| ||||||||||||    
T  27737741 ctcaaccaattagtaatttaccaaattatcctttataggggtaaaatggtaaattcaagggacttttctttttatagaagtatatagat 27737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 4848422 - 4848347
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||| ||||| ||||||||||||||||||| | || |||||||   ||| |||| |||||||||||    
T  4848422 taatttaccaaattacccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4848347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 24684650 - 24684687
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  24684650 ttaccaaattgccccttatagaggcaaaatggtaaatt 24684687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 18378802 - 18378889
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  18378802 ctcaaccaataattaatttaccaaattgcccctaatagaggcaaaatgataaattcaaaggacatttcttttaatataagtatataga 18378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 36776491 - 36776403
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||||| || |||||||||||||  ||| |||||||||||    
T  36776491 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaattcaagggacatttcttttcttattagtatatagat 36776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 24054001 - 24053912
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||| ||||||| ||  |||||||||||||||| ||||| ||||||||||||||| || |||||||||||||  ||| ||||||||||||    
T  24054001 ctcaaccaataagtagattaccaaattgccccttataggagcaaaatggtaaattcaagggacatttcttttcttattagtatatagata 24053912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Complemental strand, 41152743 - 41152666
Alignment:
Q  51 aatttaccaaatt--gcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||  | |||| |||||| |||||||||||||| || ||||||||||||| |||||||||||||||||    
T  41152743 aatttaccaaattaggaccctgatagggacaaaatggtaaattcaagggacatttctttttatataagtatatagata 41152666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 25346121 - 25346050
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||||| ||  |||||||||||||||| |||| |||||||||||||||| || |||||||||||||    
T  25346121 ctcaaccaataagtagattaccaaattgccccttatagaggcaaaatggtaaattcaatggacatttctttt 25346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 40587709 - 40587763
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||| ||||    
T  40587709 ttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttatttt 40587763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 41973026 - 41972977
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacattt 103  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  41973026 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacattt 41972977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 8760771 - 8760734
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8760771 ttaccaaattgccccttataggggcaaaatggtaaatt 8760734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 25836282 - 25836319
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||||||||||||||||||||    
T  25836282 ttaccaaattgccccttataggggcaaaatggtaaatt 25836319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 19243305 - 19243233
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||||||| |||||||||| |||||| | ||  |||||  ||||| |||| ||||||||||||    
T  19243305 ttaccaaattgcccctaagaggggcaaaaaggtaaaatcaacagacatcactttttatattagtatatagata 19243233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 19316489 - 19316417
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||||||| |||||||||| |||||| | ||  |||||  ||||| |||| ||||||||||||    
T  19316489 ttaccaaattgcccctaagaggggcaaaaaggtaaaatcaacagacatcactttttatattagtatatagata 19316417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 25620727 - 25620766
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaa 89  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  25620727 taatttaccaaattgcccctcataggggcaaaatagtaaa 25620766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 1942859 - 1942822
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1942859 ttaccaaattgccccttatagaggcaaaatggtaaatt 1942822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 8162792 - 8162829
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  8162792 ttaccaaattgacccttataggggcaaaatggtaaatt 8162829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 32844219 - 32844182
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| || ||||||||||||||||||    
T  32844219 ttaccaaattgccccttatcggggcaaaatggtaaatt 32844182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 45435060 - 45435023
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  45435060 ttaccaaattgccccttataagggcaaaatggtaaatt 45435023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 7389272 - 7389220
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    ||||||||||||||||||||  | |||||||||||||||| | || |||||||    
T  7389272 taatttaccaaattgcccctccttggggcaaaatggtaaaatcaatggacatt 7389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 25616511 - 25616563
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    ||||||||||||||||||||  || ||||||||||||||| | || |||||||    
T  25616511 taatttaccaaattgcccctcttaagggcaaaatggtaaaatcaatggacatt 25616563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 11858 - 11768
Alignment:
Q  39 cagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatatga 129  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  11858 cagccaataataaatttaccaaattgcccctaataaaggcaaaatggtaaattcaaatgacatttcttttaatataagtatatagatatga 11768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 225509 - 225433
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  225509 taatttaccaaattgccccttataggggcaaaatggtaaattcaatggacatttcttttaatataagtatatagata 225433  T

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Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 108617 - 108549
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||||||||| ||||| || ||| |||||||||||||| || |||||||||||||  ||| ||||||||    
T  108617 ttaccaaattaccccttatggggacaaaatggtaaattcaagggacatttcttttcttattagtatata 108549  T

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Target: scaffold0385 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 8317 - 8383
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtata 120  Q
    |||||||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  8317 ttaccaaattgccccttataggggcaaaatggtaaattcatgggacatttcttttaatataagtata 8383  T

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Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 22519276 - 22519187
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||| ||||| | |||||||| ||||||||||| ||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||    
T  22519276 ctcaaccaattaataatttactaaattgccccttataggggcaaaatggtaaattcaatggaca-ttcttttaatagaagtatatagatat 22519187  T

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Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 22473714 - 22473641
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||||||||| ||||||||||||||||||||  |  | ||||||||||||||||||||||||||||||    
T  22473714 ttaccaaattgccccttataggggcaaaatggtaaatccatggaacatttcttttaatataagtatatagatat 22473641  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 8393637 - 8393561
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||   ||| |||| ||||||||||||    
T  8393637 taatttaccaaattgccccttataggggcaaaatggtaaattcaaaggacattaacttttatattagtatatagata 8393561  T

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Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 11955542 - 11955610
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||||||||||||||| ||||||||||||||||||||  |  |||||||||||||||||||||||||||    
T  11955542 ttaccaaattgccccttataggggcaaaatggtaaatccatgggacatttcttttaatataagtatata 11955610  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 29530561 - 29530649
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| |||||| |||||||||||||| || |||||||||||||  ||| |||||||||||    
T  29530561 ctcaaccaataagtagattaccaaattgccccttatagggacaaaatggtaaattcaagggacatttcttttcttattagtatatagat 29530649  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 35855274 - 35855220
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  35855274 ttaccaaattgccccttataggggcaaaatggtaaatttaagggacatttctttt 35855220  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 26102167 - 26102240
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatat 127  Q
    |||||||||| || || ||||||||||||||||||||| ||||||||||||||||  ||| |||||||| ||||    
T  26102167 ttaccaaattacctcttataggggcaaaatggtaaattcaaaggacatttcttttcttattagtatatatatat 26102240  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 8528103 - 8528191
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||| ||||||| ||  |||||||||||||||| |||||| || ||||||||||| || |||||||||||||  ||| |||||||||||    
T  8528103 ctcaaccaataaatatattaccaaattgccccttatagggacagaatggtaaattcaagggacatttcttttcttattagtatatagat 8528191  T

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Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 18682563 - 18682511
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  18682563 taatttaccaaattgccccttataggggcaaaatggtaaattcaagggacatt 18682511  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 19368941 - 19369013
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttta 109  Q
    |||| ||||||| ||  |||||||||||||||| ||||||||||||||||||| | || ||||||||||||||    
T  19368941 ctcaaccaataagtagattaccaaattgccccttataggggcaaaatggtaaaatcaagggacatttctttta 19369013  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 4139360 - 4139435
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    ||||||||||||||||||||||||||| |||||||||||| | || |||||||   ||| |||| |||||||||||    
T  4139360 taatttaccaaattgcccctaatagggacaaaatggtaaaatcaatggacattaacttttatattagtatatagat 4139435  T

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Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 19895645 - 19895732
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    |||| ||||| | |||||||||||||||||| | ||| ||||||||||||||||| || ||||||||  ||  |||||||||||||||    
T  19895645 ctcaaccaattactaatttaccaaattgccctttataagggcaaaatggtaaattcaatggacattttcttctatataagtatataga 19895732  T

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Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 33872287 - 33872205
Alignment:
Q  42 ccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatataga 124  Q
    ||||| |||||||||||||| || ||||  ||||| |||||||||||||| |  ||||||||||||| |||| ||||||||||    
T  33872287 ccaattattaatttaccaaaatggcccttctagggacaaaatggtaaattcatcggacatttctttttatattagtatataga 33872205  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 26777863 - 26777902
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaa 89  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26777863 taatttaccaaattgcccctcataggggcaaaatggtaaa 26777902  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 28981834 - 28981881
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacat 101  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||    
T  28981834 ttaccaaattgccccttataggggcaaaatggtaaattcaagggacat 28981881  T

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Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 55297343 - 55297414
Alignment:
Q  37 ctcagccaataattaatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttctttt 108  Q
    |||| ||||| | |||||||||||||| ||| | ||||||| |||||||||||||  | |||||||||||||    
T  55297343 ctcaaccaattaataatttaccaaattaccctttataggggtaaaatggtaaattcgagggacatttctttt 55297414  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 11602187 - 11602253
Alignment:
Q  60 aattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagata 126  Q
    |||||||||| ||||||||||||||||||| | || ||||||   |||| |||| ||||||||||||    
T  11602187 aattgccccttataggggcaaaatggtaaaatcaacggacatggatttttatattagtatatagata 11602253  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 9563300 - 9563228
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatata 122  Q
    |||||||||||| ||||| |  || ||||||||||||||||| ||  ||||| |||||| |||| ||||||||    
T  9563300 taatttaccaaaatgccctttctatgggcaaaatggtaaatttaatagacatctctttttatattagtatata 9563228  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 53800573 - 53800521
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatt 102  Q
    ||||||||||||||||||||  || ||||||||||||||| | || |||||||    
T  53800573 taatttaccaaattgcccctcctaagggcaaaatggtaaaatcaatggacatt 53800521  T

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Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 62136 - 62057
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagatatga 129  Q
    |||||||||||||||||||| ||||||||||||||||||| | || |||||||   ||| |||| |||||||||||||||    
T  62136 taatttaccaaattgcccctcataggggcaaaatggtaaaatcaatggacattaacttttatattagtatatagatatga 62057  T

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Target: scaffold0759 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 5904 - 5979
Alignment:
Q  50 taatttaccaaattgcccctaataggggcaaaatggtaaattaaaaggacatttcttttaatataagtatatagat 125  Q
    |||||||||||||||||||| ||||||||||||||||||||| |  |||||||   ||| |||| |||||||||||    
T  5904 taatttaccaaattgccccttataggggcaaaatggtaaattcatgggacattaacttttatattagtatatagat 5979  T

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Target: scaffold0381 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 9639 - 9602
Alignment:
Q  54 ttaccaaattgcccctaataggggcaaaatggtaaatt 91  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  9639 ttaccaaattgacccttataggggcaaaatggtaaatt 9602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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