View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1150_high_17 (Length: 445)

Name: NF1150_high_17
Description: NF1150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1150_high_17
NF1150_high_17
[»] chr4 (59 HSPs)
chr4 (313-436)||(51301231-51301354)
chr4 (29-127)||(51301346-51301447)
chr4 (237-314)||(43202382-43202459)
chr4 (237-318)||(16536158-16536240)
chr4 (237-315)||(50619196-50619274)
chr4 (237-320)||(4089252-4089336)
chr4 (237-312)||(43944617-43944692)
chr4 (237-313)||(16820962-16821039)
chr4 (237-317)||(29591299-29591380)
chr4 (237-312)||(12356354-12356430)
chr4 (237-314)||(7769048-7769126)
chr4 (237-312)||(6164203-6164279)
chr4 (245-317)||(31517284-31517356)
chr4 (237-312)||(5091612-5091686)
chr4 (238-320)||(18067871-18067954)
chr4 (240-314)||(53003954-53004029)
chr4 (237-305)||(789537-789606)
chr4 (237-313)||(33108672-33108749)
chr4 (237-312)||(4268822-4268898)
chr4 (237-283)||(30387164-30387210)
chr4 (237-318)||(32202475-32202556)
chr4 (244-306)||(54655883-54655945)
chr4 (240-312)||(54897421-54897494)
chr4 (122-177)||(18068015-18068071)
chr4 (263-322)||(54054665-54054725)
chr4 (131-177)||(4268958-4269005)
chr4 (131-177)||(15186246-15186293)
chr4 (246-285)||(24679671-24679710)
chr4 (237-312)||(39877247-39877325)
chr4 (250-320)||(42898736-42898807)
chr4 (241-313)||(37402758-37402830)
chr4 (244-315)||(34151238-34151310)
chr4 (131-177)||(789666-789713)
chr4 (237-280)||(3783534-3783577)
chr4 (122-176)||(4089136-4089191)
chr4 (245-311)||(16572488-16572555)
chr4 (237-280)||(19503138-19503181)
chr4 (126-177)||(28755619-28755670)
chr4 (237-280)||(37988045-37988088)
chr4 (122-177)||(42815104-42815159)
chr4 (131-177)||(43202519-43202566)
chr4 (131-177)||(43944510-43944557)
chr4 (237-280)||(52533818-52533861)
chr4 (245-303)||(53655887-53655946)
chr4 (237-315)||(55882793-55882871)
chr4 (131-177)||(19503241-19503287)
chr4 (245-314)||(32217162-32217232)
chr4 (237-311)||(41265568-41265642)
chr4 (134-164)||(43944656-43944686)
chr4 (240-286)||(46149052-46149098)
chr4 (118-175)||(54054538-54054596)
chr4 (272-313)||(11893400-11893441)
chr4 (241-313)||(28119905-28119978)
chr4 (240-289)||(30154187-30154236)
chr4 (252-315)||(4220319-4220383)
chr4 (240-280)||(31680496-31680536)
chr4 (237-281)||(39844017-39844061)
chr4 (245-285)||(50603346-50603386)
chr4 (126-177)||(54897306-54897358)
[»] chr2 (38 HSPs)
chr2 (237-322)||(20553041-20553127)
chr2 (237-312)||(22887860-22887936)
chr2 (237-314)||(34442531-34442608)
chr2 (237-312)||(30486320-30486396)
chr2 (237-320)||(31438756-31438840)
chr2 (237-313)||(22068319-22068396)
chr2 (240-315)||(22567715-22567791)
chr2 (237-312)||(32360869-32360945)
chr2 (237-314)||(27856394-27856472)
chr2 (237-314)||(28601076-28601154)
chr2 (237-312)||(31390122-31390198)
chr2 (237-318)||(35851744-35851827)
chr2 (237-312)||(44588012-44588088)
chr2 (237-315)||(561515-561594)
chr2 (237-311)||(4022480-4022555)
chr2 (237-315)||(4381905-4381984)
chr2 (237-310)||(1859272-1859346)
chr2 (237-294)||(6580299-6580356)
chr2 (237-315)||(3668110-3668189)
chr2 (127-177)||(3668249-3668299)
chr2 (244-313)||(26387063-26387133)
chr2 (237-311)||(27584848-27584922)
chr2 (130-177)||(4381797-4381845)
chr2 (118-177)||(20552921-20552981)
chr2 (253-311)||(2898197-2898256)
chr2 (237-304)||(38590883-38590950)
chr2 (240-314)||(5093538-5093612)
chr2 (237-306)||(8969413-8969483)
chr2 (127-177)||(28600967-28601017)
chr2 (237-314)||(32860212-32860289)
chr2 (237-314)||(34123025-34123101)
chr2 (131-177)||(561654-561701)
chr2 (238-281)||(5881332-5881375)
chr2 (237-311)||(13574031-13574105)
chr2 (237-317)||(39531933-39532013)
chr2 (241-312)||(45262024-45262096)
chr2 (126-177)||(31438644-31438696)
chr2 (245-312)||(31782565-31782633)
[»] chr8 (51 HSPs)
chr8 (237-313)||(27988499-27988575)
chr8 (237-313)||(28045801-28045877)
chr8 (237-312)||(20831553-20831629)
chr8 (237-312)||(34228792-34228868)
chr8 (241-319)||(13643125-13643204)
chr8 (241-319)||(13743550-13743629)
chr8 (237-312)||(16394061-16394137)
chr8 (237-312)||(16888544-16888620)
chr8 (237-318)||(30675567-30675648)
chr8 (237-313)||(168576-168653)
chr8 (237-305)||(2805267-2805336)
chr8 (237-306)||(28626878-28626947)
chr8 (237-314)||(36730554-36730631)
chr8 (237-304)||(7304526-7304594)
chr8 (237-316)||(9253899-9253978)
chr8 (237-315)||(4537741-4537820)
chr8 (237-312)||(24843280-24843355)
chr8 (237-296)||(33357146-33357205)
chr8 (237-312)||(43119327-43119402)
chr8 (131-177)||(21595850-21595896)
chr8 (237-314)||(4648304-4648382)
chr8 (244-313)||(9063051-9063121)
chr8 (237-306)||(16890486-16890556)
chr8 (118-177)||(30675708-30675768)
chr8 (118-177)||(37373196-37373255)
chr8 (241-318)||(2270639-2270717)
chr8 (245-318)||(2490151-2490225)
chr8 (131-177)||(16888680-16888726)
chr8 (237-314)||(29444138-29444216)
chr8 (237-298)||(16785196-16785257)
chr8 (237-286)||(21595956-21596005)
chr8 (237-306)||(39406952-39407020)
chr8 (272-317)||(42655272-42655317)
chr8 (237-289)||(3930257-3930309)
chr8 (237-273)||(10870462-10870498)
chr8 (131-175)||(12203858-12203902)
chr8 (131-175)||(12448286-12448330)
chr8 (118-177)||(13643002-13643062)
chr8 (118-177)||(13743427-13743487)
chr8 (131-177)||(168469-168516)
chr8 (237-303)||(12203964-12204031)
chr8 (237-303)||(12448392-12448459)
chr8 (131-177)||(20831689-20831736)
chr8 (237-318)||(37373315-37373397)
chr8 (128-176)||(10618018-10618067)
chr8 (237-315)||(22956815-22956895)
chr8 (131-175)||(16785090-16785134)
chr8 (241-312)||(29235349-29235421)
chr8 (243-318)||(32114025-32114101)
chr8 (244-280)||(42035014-42035050)
chr8 (241-316)||(43714184-43714260)
[»] chr6 (38 HSPs)
chr6 (237-315)||(392206-392285)
chr6 (237-315)||(32929505-32929584)
chr6 (237-312)||(35043999-35044074)
chr6 (237-315)||(13416957-13417035)
chr6 (238-320)||(26467116-26467199)
chr6 (237-306)||(3026015-3026085)
chr6 (237-314)||(4215805-4215883)
chr6 (237-306)||(32985199-32985269)
chr6 (237-294)||(22417303-22417360)
chr6 (237-319)||(3515876-3515959)
chr6 (237-315)||(23402248-23402327)
chr6 (237-315)||(25165410-25165489)
chr6 (238-320)||(27433603-27433686)
chr6 (238-307)||(2350763-2350833)
chr6 (238-304)||(11115106-11115172)
chr6 (245-315)||(29978350-29978420)
chr6 (237-319)||(12525829-12525912)
chr6 (240-313)||(2581065-2581139)
chr6 (237-289)||(1840271-1840323)
chr6 (237-312)||(12145117-12145193)
chr6 (122-177)||(27433486-27433542)
chr6 (131-177)||(392099-392146)
chr6 (131-177)||(3515769-3515816)
chr6 (237-280)||(7851192-7851235)
chr6 (240-286)||(34851876-34851922)
chr6 (237-312)||(18276612-18276691)
chr6 (241-313)||(34706835-34706908)
chr6 (240-280)||(961122-961162)
chr6 (131-175)||(3026147-3026190)
chr6 (240-311)||(5323513-5323585)
chr6 (237-285)||(9661096-9661144)
chr6 (237-289)||(29451139-29451191)
chr6 (131-177)||(20897951-20897998)
chr6 (122-177)||(29978227-29978282)
chr6 (131-177)||(32929644-32929691)
chr6 (131-176)||(7851296-7851342)
chr6 (244-317)||(28225337-28225411)
chr6 (239-312)||(31280433-31280501)
[»] chr5 (27 HSPs)
chr5 (237-322)||(34650823-34650909)
chr5 (237-317)||(11957962-11958043)
chr5 (237-313)||(13661918-13661995)
chr5 (121-177)||(34650969-34651025)
chr5 (237-315)||(35504238-35504316)
chr5 (246-314)||(35132640-35132709)
chr5 (237-314)||(4268671-4268749)
chr5 (237-314)||(8787449-8787527)
chr5 (244-309)||(6283679-6283745)
chr5 (237-312)||(10054353-10054429)
chr5 (237-289)||(12506406-12506458)
chr5 (126-177)||(35504376-35504428)
chr5 (240-276)||(39069491-39069527)
chr5 (245-320)||(40564396-40564472)
chr5 (131-177)||(10054488-10054535)
chr5 (237-322)||(9721597-9721683)
chr5 (240-285)||(10956064-10956109)
chr5 (131-177)||(10069972-10070019)
chr5 (238-289)||(11846183-11846234)
chr5 (131-177)||(13661811-13661858)
chr5 (131-177)||(35132525-35132572)
chr5 (251-285)||(2619596-2619630)
chr5 (244-306)||(20175344-20175406)
chr5 (128-165)||(20869307-20869344)
chr5 (242-275)||(39066973-39067006)
chr5 (241-316)||(14214046-14214121)
chr5 (237-312)||(21547394-21547470)
[»] chr3 (39 HSPs)
chr3 (237-318)||(43786981-43787063)
chr3 (237-319)||(52520791-52520874)
chr3 (237-305)||(49893441-49893510)
chr3 (237-316)||(39074528-39074608)
chr3 (238-312)||(272331-272406)
chr3 (237-315)||(4168293-4168372)
chr3 (237-315)||(18014782-18014861)
chr3 (237-314)||(40362578-40362656)
chr3 (240-312)||(10617284-10617357)
chr3 (237-312)||(6842729-6842805)
chr3 (237-312)||(46352744-46352820)
chr3 (240-315)||(50395560-50395636)
chr3 (237-311)||(33140995-33141070)
chr3 (237-314)||(48725381-48725459)
chr3 (237-305)||(858699-858768)
chr3 (237-313)||(43269738-43269815)
chr3 (244-312)||(52552590-52552658)
chr3 (238-300)||(2505460-2505523)
chr3 (237-312)||(7468521-7468595)
chr3 (237-303)||(24488476-24488543)
chr3 (237-315)||(42964246-42964325)
chr3 (240-311)||(49529269-49529339)
chr3 (240-306)||(42548208-42548274)
chr3 (238-313)||(11308210-11308285)
chr3 (131-177)||(39074422-39074469)
chr3 (131-177)||(52520684-52520731)
chr3 (240-313)||(2938039-2938113)
chr3 (237-306)||(41304113-41304183)
chr3 (237-286)||(20924102-20924151)
chr3 (237-289)||(41553964-41554016)
chr3 (237-289)||(53489848-53489900)
chr3 (118-177)||(53489960-53490022)
chr3 (131-177)||(272223-272270)
chr3 (131-177)||(46352637-46352684)
chr3 (131-177)||(49893334-49893381)
chr3 (241-287)||(28139423-28139469)
chr3 (128-177)||(41554076-41554125)
chr3 (118-177)||(2362791-2362851)
chr3 (126-177)||(20923990-20924042)
[»] chr1 (47 HSPs)
chr1 (237-318)||(5694431-5694513)
chr1 (237-314)||(47010103-47010181)
chr1 (237-316)||(15227849-15227929)
chr1 (237-315)||(18043272-18043351)
chr1 (237-315)||(29657881-29657960)
chr1 (237-315)||(42769987-42770066)
chr1 (237-315)||(51065745-51065824)
chr1 (237-322)||(38162960-38163046)
chr1 (238-289)||(45431389-45431440)
chr1 (237-306)||(12072068-12072138)
chr1 (240-314)||(14350277-14350350)
chr1 (237-305)||(24178470-24178539)
chr1 (237-312)||(30294381-30294457)
chr1 (237-312)||(48383111-48383187)
chr1 (237-311)||(13961321-13961396)
chr1 (237-315)||(50128169-50128248)
chr1 (241-287)||(12307031-12307077)
chr1 (131-177)||(17333418-17333464)
chr1 (238-315)||(43286833-43286913)
chr1 (237-313)||(19031814-19031891)
chr1 (237-309)||(39081910-39081983)
chr1 (237-313)||(45449243-45449320)
chr1 (237-316)||(3097769-3097846)
chr1 (237-312)||(9266728-9266804)
chr1 (238-289)||(19010711-19010762)
chr1 (244-305)||(3784720-3784782)
chr1 (237-317)||(23473459-23473540)
chr1 (237-314)||(38701935-38702009)
chr1 (237-285)||(6770447-6770495)
chr1 (241-312)||(38595752-38595824)
chr1 (237-289)||(41730418-41730470)
chr1 (237-315)||(8472911-8472990)
chr1 (131-177)||(14350413-14350460)
chr1 (131-177)||(29210416-29210463)
chr1 (263-313)||(29210530-29210581)
chr1 (131-177)||(38702069-38702116)
chr1 (131-177)||(42770126-42770173)
chr1 (237-280)||(48071592-48071635)
chr1 (128-177)||(12072198-12072248)
chr1 (238-312)||(30217873-30217946)
chr1 (238-288)||(51368810-51368860)
chr1 (237-286)||(36446352-36446401)
chr1 (238-314)||(11796969-11797045)
chr1 (271-307)||(17333426-17333462)
chr1 (241-312)||(23822523-23822593)
chr1 (241-312)||(28725905-28725977)
chr1 (237-289)||(35985645-35985697)
[»] chr7 (40 HSPs)
chr7 (238-315)||(12218434-12218511)
chr7 (237-312)||(24438587-24438663)
chr7 (237-313)||(42044293-42044369)
chr7 (237-312)||(525076-525151)
chr7 (245-311)||(11686324-11686390)
chr7 (241-315)||(19434608-19434682)
chr7 (237-317)||(13064871-13064952)
chr7 (237-312)||(24798403-24798479)
chr7 (237-315)||(34333393-34333472)
chr7 (237-304)||(47083165-47083232)
chr7 (240-312)||(29993487-29993560)
chr7 (237-313)||(34606371-34606448)
chr7 (237-312)||(4628676-4628752)
chr7 (245-306)||(47657096-47657157)
chr7 (237-289)||(7689224-7689276)
chr7 (237-289)||(23357734-23357786)
chr7 (237-289)||(23363191-23363243)
chr7 (237-289)||(45045880-45045932)
chr7 (131-177)||(34333287-34333334)
chr7 (131-177)||(28587913-28587959)
chr7 (241-314)||(38128406-38128480)
chr7 (237-286)||(43594063-43594112)
chr7 (237-312)||(5239395-5239471)
chr7 (244-311)||(5729463-5729531)
chr7 (131-163)||(13106466-13106498)
chr7 (126-177)||(24438475-24438527)
chr7 (237-289)||(28262136-28262188)
chr7 (237-289)||(47839602-47839654)
chr7 (237-315)||(30810765-30810844)
chr7 (245-288)||(33636570-33636613)
chr7 (239-313)||(6820026-6820100)
chr7 (131-177)||(24798539-24798585)
chr7 (272-318)||(34556886-34556931)
chr7 (131-175)||(8754723-8754768)
chr7 (241-312)||(6097451-6097523)
chr7 (133-165)||(6820062-6820094)
chr7 (237-289)||(18486071-18486123)
chr7 (283-331)||(24798559-24798607)
chr7 (131-175)||(27456251-27456295)
chr7 (237-265)||(47118037-47118065)
[»] scaffold0425 (1 HSPs)
scaffold0425 (237-312)||(10820-10896)
[»] scaffold0188 (2 HSPs)
scaffold0188 (237-315)||(6107-6186)
scaffold0188 (131-177)||(6246-6293)
[»] scaffold0003 (2 HSPs)
scaffold0003 (238-320)||(53677-53760)
scaffold0003 (122-177)||(53821-53877)
[»] scaffold0190 (1 HSPs)
scaffold0190 (237-317)||(15006-15087)
[»] scaffold0524 (1 HSPs)
scaffold0524 (240-289)||(938-987)
[»] scaffold0264 (2 HSPs)
scaffold0264 (237-313)||(23071-23148)
scaffold0264 (131-177)||(22964-23011)
[»] scaffold1266 (1 HSPs)
scaffold1266 (237-285)||(402-450)
[»] scaffold0113 (1 HSPs)
scaffold0113 (237-312)||(41029-41105)
[»] scaffold0263 (1 HSPs)
scaffold0263 (237-286)||(19612-19661)
[»] scaffold0014 (1 HSPs)
scaffold0014 (237-285)||(68318-68366)
[»] scaffold0045 (1 HSPs)
scaffold0045 (253-311)||(53358-53417)
[»] scaffold0007 (1 HSPs)
scaffold0007 (237-322)||(233963-234050)
[»] scaffold0038 (1 HSPs)
scaffold0038 (244-317)||(25835-25909)
[»] scaffold1152 (1 HSPs)
scaffold1152 (239-280)||(790-831)
[»] scaffold0021 (1 HSPs)
scaffold0021 (237-289)||(116314-116366)


Alignment Details
Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 51301354 - 51301231
Alignment:
Q  313 ttatttatttcatgcttctccttttctaataaaatcttagtctcataacatgattttgtctatgttgtctcttgaggtagggaactcaatgcccacatca 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51301354 ttatttatttcatgcttctccttttctaataaaatcttagtctcataacatgattttgtctatgttgtctcttgaggtagggaactcaatgcccacatca 51301255  T
Q  413 cgtttttataatgcccatattctt 436  Q
    |||||||||||||||||| |||||    
T  51301254 cgtttttataatgcccattttctt 51301231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 51301447 - 51301346
Alignment:
Q  29 atgtgcgtctttccatttctacagacacactgccccaatcacaaagactccaggtgcaagcataactc---aatatactcttatttcttcccattattta 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  51301447 atgtgcgtctttccatttctacagacacactgccccaatcacaaagactccaggtgcaagcataactcaataatatactcttatttcttcccattattta 51301348  T
Q  126 tt 127  Q
    ||    
T  51301347 tt 51301346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 43202459 - 43202382
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||| ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||    
T  43202459 cagttttcttttatggtaataattctcttttatggtaagcttaaccagtgcccgggggcaccggttagcaggaccctt 43202382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 16536158 - 16536240
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattt 318  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||||||| |||||||||||    
T  16536158 cagtttccttttatggtaataattctattttatggtattcttaaccagtgccccgggggcaccggttagcaggacccttattt 16536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 50619196 - 50619274
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||  ||||||||    
T  50619196 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcccaggggcaccggttagcgggaccctta 50619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 4089252 - 4089336
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||| ||| |||||||| ||||||| |||||||||||||    
T  4089252 cagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccccaggggcaccagttagcaggacccttatttat 4089336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 43944617 - 43944692
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||| ||||||||||||||| |||||    
T  43944617 cagtttccttttatggtaataattcccttgtatggtatgcttaaccagtgcccgagggcaccggttagcaagaccc 43944692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 16820962 - 16821039
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||    
T  16820962 cagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 16821039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 29591299 - 29591380
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||||||  |||||||| |||||||||  |||| |||||||||||||||||||| ||||||||||    
T  29591299 cagtttccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcaggacccttatt 29591380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 12356354 - 12356430
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||||||||||| |||||    
T  12356354 cagtttccttttatgataataattctcttttatggtatgcttaaccagtgttccgggggcaccggttagcaggaccc 12356430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 7769048 - 7769126
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||||||||||||||||||||  || ||||| | ||| |||||||||||||||||||| |||||||    
T  7769048 cagtttccttttatggtaataattctcttttatggcatacttaacccgtgccccgggggcaccggttagcaggaccctt 7769126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 6164203 - 6164279
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||  |||| || |||||||||||| |||||    
T  6164203 cagtttccttttatggtaataattctcttttatggtatgcttaaccagtaccccgaggacaccggttagcaggaccc 6164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 31517284 - 31517356
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||| |||| | ||||||||||    
T  31517284 ttttatggtaataattctcttatatggtatgcttaaccagtgcctgggggcaccgattagaaggacccttatt 31517356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 5091686 - 5091612
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||| |||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||| |||||    
T  5091686 cagtttccttttatagtaataattcccttttatg-tatgcttaaccagtgtccgggagcaccggttagcaggaccc 5091612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 18067954 - 18067871
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcag-tgcccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||| |||||||| |||| |||| | | | |||||||||||||||||||| ||||||| |||||    
T  18067954 agtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagacccttctttat 18067871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 53004029 - 53003954
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||   |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||    
T  53004029 tttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttagcaggaccctt 53003954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 789606 - 789537
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagc 305  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||| |||| | |||||||||||||    
T  789606 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtagcccagaggcaccggttagc 789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 33108749 - 33108672
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| | ||| ||||| |||||||||||||| ||||||    
T  33108749 cagtttccttttatggtaataattcctttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccct 33108672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 4268898 - 4268822
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||| ||||||||||||||||| |||||||| |||| |||| ||||| |||| ||||||||||||||| |||||    
T  4268898 cagtttctttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcaggaccc 4268822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 30387210 - 30387164
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatca 283  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||    
T  30387210 cagtttccttttatggtaataattcctttttatgatatgcttaatca 30387164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 32202556 - 32202475
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattt 318  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| || ||| | |||||| |||| || |||||||||||    
T  32202556 cagtttccttttatgataataattc-cttttatgatatgcttaatcaatgtcccagaggcaccagttaacaggacccttattt 32202475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 54655945 - 54655883
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    |||||| | |||||||||||| ||||||||||||||| ||||| || ||||||||||||||||    
T  54655945 cttttaggataataattctctcttatgatatgcttaaccagtgtcccggggcaccggttagca 54655883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 54897421 - 54897494
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||  |||||||| |||| |||| ||||| ||||| |||||||||||||| |||||    
T  54897421 tttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggaccc 54897494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 18068071 - 18068015
Alignment:
Q  122 tttattggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    ||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  18068071 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 18068015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 54054665 - 54054725
Alignment:
Q  263 cttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgacccttatttattt 322  Q
    |||||||| ||||||||| |||||||| ||||||||||||| ||| |||||||||||||||    
T  54054665 cttttatggtatgcttaaccagtgccccgggggcaccggttggcaggacccttatttattt 54054725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 4269005 - 4268958
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  4269005 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 4268958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 15186246 - 15186293
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  15186246 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 15186293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 285
Target Start/End: Complemental strand, 24679710 - 24679671
Alignment:
Q  246 tttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  24679710 tttatggtaataattctcttttatggtatgcttaatcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 39877325 - 39877247
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatg--atatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||| |||||| |||||||||||||||||||  |||||||||| ||||| ||||| ||||| |||||||| |||||    
T  39877325 cagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgccccggaggcacgggttagcaggaccc 39877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 42898807 - 42898736
Alignment:
Q  250 tggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttat 320  Q
    ||||||||||||||||||||| ||||||||| || || ||||||| ||||| || |||||| ||||||||||    
T  42898807 tggtaataattctcttttatggtatgcttaaccaatgtcccggggacaccgattcgcatgatccttatttat 42898736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 37402830 - 37402758
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgg-gggcaccggttagcatgaccct 313  Q
    ||||||||||||||| ||||  ||||| || ||||||||| |||||||| | ||||||||||||||||||||||    
T  37402830 ttccttttatggtaagaatttccttttttg-tatgcttaaccagtgccccgagggcaccggttagcatgaccct 37402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 34151238 - 34151310
Alignment:
Q  244 cttttatggtaataattctcttttatga-tatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||| |||| |||||| |   ||||||||| | ||||||||| ||||||||||||||||||||||    
T  34151238 cttttatggtaagaattttcttttttttgtatgcttaacccgtgcccgggagcaccggttagcatgaccctta 34151310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 789713 - 789666
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  789713 aaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaagg 789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 3783577 - 3783534
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||| |||||||||||||||||| |||||||| |||||||||    
T  3783577 cagttttcttttatggtaataattcccttttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 4089136 - 4089191
Alignment:
Q  122 tttattggaaaatgctaaccggtgccc-tcgggcactggttaagggtatgaaaaag 176  Q
    ||||| || |||||||||||||||||| | |||||||| |||||||||||||||||    
T  4089136 tttatagggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaag 4089191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 16572555 - 16572488
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgacc 311  Q
    ||||||||||| ||||  ||||| |  ||| |||||||||||||| ||||||||||||||||||||||    
T  16572555 ttttatggtaagaatttcctttttttgtatacttaatcagtgccccgggggcaccggttagcatgacc 16572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 19503181 - 19503138
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||||||||||| |||||||||| |||||||| |||||||||    
T  19503181 cagtttccttttattgtaataattcccttttatggtatgcttaa 19503138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 28755619 - 28755670
Alignment:
Q  126 ttggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||| ||||||||||||||| ||  ||||||||||||||| |||||||||||    
T  28755619 ttgggaaatgctaaccggtgtcccagggcactggttaaggatatgaaaaagg 28755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 37988045 - 37988088
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||||||||||| ||||||||||||||||||  |||||||||    
T  37988045 cagtttccttttattgtaataattctcttttatagtatgcttaa 37988088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 42815104 - 42815159
Alignment:
Q  122 tttattggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    ||||| ||||||||||||||||||| || | | ||||||||||| |||||||||||    
T  42815104 tttataggaaaatgctaaccggtgctctggagtactggttaaggatatgaaaaagg 42815159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 43202566 - 43202519
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  43202566 aaatgctaaccggtgcccccggggcactagttaagggtatgaaaaagg 43202519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 43944510 - 43944557
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||    
T  43944510 aaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 43944557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 52533861 - 52533818
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  52533861 cagtttccttttatggtaataattcccttttatggtatgtttaa 52533818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 53655946 - 53655887
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggtta 303  Q
    ||||||||||||||||   ||||||| ||||||||||||||||| ||| |||||||||||    
T  53655946 ttttatggtaataatttcattttatggtatgcttaatcagtgcctcggaggcaccggtta 53655887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 55882793 - 55882871
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccctta 315  Q
    |||||| |||||||||||| ||||| |||||||| ||| ||||| | ||||| |||||||||||||||| | ||||||||    
T  55882793 cagttttcttttatggtaa-aattcacttttatggtatacttaacccgtgcctcgggggcaccggttagtaggaccctta 55882871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 19503287 - 19503241
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||| | |||| ||||||||||| |||||||||||    
T  19503287 aaatgctaaccggtgctcccgggtactggttaaggatatgaaaaagg 19503241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 32217162 - 32217232
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcccggg-ggcaccggttagcatgaccctt 314  Q
    ||||||| ||||||||| |||||||| ||||||||| | |||||| || ||||||||||| || |||||||    
T  32217162 ttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacaggaccctt 32217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 41265568 - 41265642
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacc 311  Q
    |||||| ||||||| ||||||||| |||||| || |||| |||| |||||||| ||  ||||| |||||||||||    
T  41265568 cagttttcttttattgtaataattttcttttttggtatgtttaaccagtgcccaggaacaccgtttagcatgacc 41265642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 164
Target Start/End: Complemental strand, 43944686 - 43944656
Alignment:
Q  134 tgctaaccggtgccctcgggcactggttaag 164  Q
    |||||||||||||||||||||||||||||||    
T  43944686 tgctaaccggtgccctcgggcactggttaag 43944656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 46149052 - 46149098
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    |||| |||||||||||||||||||||||||| |||| |||| |||||    
T  46149052 tttctttttatggtaataattctcttttatggtatgtttaaccagtg 46149098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 54054538 - 54054596
Alignment:
Q  118 attatttattggaaaatgctaaccggtg-ccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||||| ||||||||||||||| |||  |||||| |||||||| |||||||||    
T  54054538 attatttattgggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaa 54054596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 11893441 - 11893400
Alignment:
Q  272 tatgcttaatcagtgcccgggggcaccggttagcatgaccct 313  Q
    ||||||||| |||||||| || ||||||||||||||||||||    
T  11893441 tatgcttaaccagtgccccggagcaccggttagcatgaccct 11893400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 28119978 - 28119905
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||| ||||  ||||| |  ||||||||| ||||| ||||| | |||||||||||||||||||    
T  28119978 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagcatgaccct 28119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 30154236 - 30154187
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||| |||| |||||||||||||||||| | ||||||| ||||||||    
T  30154236 tttccttatatgataataattctcttttatggtgtgcttaaccagtgccc 30154187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 4220319 - 4220383
Alignment:
Q  252 gtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccctta 315  Q
    |||||||||| |||||||| |||||||||   |||| |||  |||||||||||||||||||||||    
T  4220319 gtaataattcccttttatggtatgcttaacatgtgctccgtaggcaccggttagcatgaccctta 4220383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 31680536 - 31680496
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  31680536 tttccttttatggtaataattcatttttatgatatgtttaa 31680496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 39844017 - 39844061
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaat 281  Q
    |||||||||||||||||||||||||  ||||| | ||||||||||    
T  39844017 cagtttccttttatggtaataattcctttttagggtatgcttaat 39844061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 50603346 - 50603386
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    ||||||| |||||||||||||||||| ||||||||| ||||    
T  50603346 ttttatgataataattctcttttatggtatgcttaaccagt 50603386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 54897306 - 54897358
Alignment:
Q  126 ttggaaaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    |||| |||||||||||||||||| | ||||||||||||||| ||||| |||||    
T  54897306 ttgggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaagg 54897358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 20553041 - 20553127
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttattt 322  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  20553041 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccttatttattt 20553127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 22887860 - 22887936
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||    
T  22887860 cagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccgggggcaccgattagcatgaccc 22887936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 34442608 - 34442531
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||||||| ||||||||| |||||||    
T  34442608 cagttttcttttatggtaataattcccttttatggtatgcttaaccagtgcccgggggcatcggttagcaggaccctt 34442531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 30486320 - 30486396
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||    
T  30486320 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 30486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 31438756 - 31438840
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttat 320  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||| ||||||| |||||||||||| |||||||||||||    
T  31438756 cagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcaggacccttatttat 31438840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 22068396 - 22068319
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||| |||||| ||||||    
T  22068396 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcaggaccct 22068319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 240 - 315
Target Start/End: Original strand, 22567715 - 22567791
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||| || |||||||||||||||| ||||||||    
T  22567715 tttccttttatggtaataattctcttttatggtatgcttaacccgtgctccaggggcaccggttagcaggaccctta 22567791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 32360945 - 32360869
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| || || |||||||||||||||||||| |||||    
T  32360945 cagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 32360869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 27856472 - 27856394
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||    
T  27856472 cagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccctt 27856394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 28601076 - 28601154
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccctt 314  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||| | ||| ||||||||||||| |||||||    
T  28601076 cagtttctttttatggtaataattctcttttatggtatgcttaaccagtgcactgggagcaccggttagcaggaccctt 28601154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 31390122 - 31390198
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| | |||| |||||||||||| |||||| |||||    
T  31390122 cagtttccttttatggtaataattcccttttatggtatgcttaacccgtgctccgggggcaccgattagcaggaccc 31390198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 35851827 - 35851744
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc--ccgggggcaccggttagcatgacccttattt 318  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| || |||  | ||||||||||||||||| |||||| ||||    
T  35851827 cagtttcattttatggtaataattctcttttatggtatgcttaaccaatgcctcggggggcaccggttagcaggaccctgattt 35851744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 44588012 - 44588088
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| |||||||||  |||| |||||||| ||||||||||| |||||    
T  44588012 cagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcaggaccc 44588088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 561594 - 561515
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||  ||||| |||||||||||||| ||| ||||    
T  561594 cagtttccttttataataataattctcttttatggtatgcttaatcagtaccccggaggcaccggttagcaggactctta 561515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 4022555 - 4022480
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacc 311  Q
    ||||||||||||||| ||||||||  ||||||||||||| |||| ||||| |||||||||||||||||||| ||||    
T  4022555 cagtttccttttatgataataatttccttttatgatatgtttaaccagtgtcccgggggcaccggttagcaggacc 4022480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 4381905 - 4381984
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| ||||| |||||| |||| |||||||| ||||||||    
T  4381905 cagtttccttttatggtaataattccattttatggtatgcttaaccagtgccccgggagcactggttagcaggaccctta 4381984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 1859272 - 1859346
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgac 310  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||  ||  ||||||||||||||||    
T  1859272 cagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccctaggaacaccggttagcatgac 1859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 6580299 - 6580356
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccggggg 294  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||    
T  6580299 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggg 6580356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 3668189 - 3668110
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||  |||||||  |||| |||| ||||| |||| ||||||||||||||| ||||||||    
T  3668189 cagtttccttttatggtaataatttccttttatagtatgtttaaccagtgccccgagggcaccggttagcaagaccctta 3668110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 3668299 - 3668249
Alignment:
Q  127 tggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  3668299 tggaaaatgctaaccggtgcccccggacactggttaagggtatggaaaagg 3668249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 26387133 - 26387063
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||  |||||||||||||| || ||||||    
T  26387133 cttttatggtaataattcccttttatggtatgcttaaccagtgccttgggggcaccggttaacaggaccct 26387063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 27584848 - 27584922
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacc 311  Q
    ||||||||||||||||||||||||||| || ||| ||| ||||| ||||||||||  ||| ||||||||| ||||    
T  27584848 cagtttccttttatggtaataattctcattcatggtatacttaaccagtgcccggaagcagcggttagcaggacc 27584922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 4381797 - 4381845
Alignment:
Q  130 aaaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaagg 177  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  4381797 aaaatgctaaccggtgcccccggtgcactggttaagggtatgaaaaagg 4381845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 20552921 - 20552981
Alignment:
Q  118 attatttattggaaaatgctaaccggtg-ccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||| ||||||||||||||| |||  ||||||||||||||| |||||||||||    
T  20552921 attatttattgggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaagg 20552981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 2898197 - 2898256
Alignment:
Q  253 taataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacc 311  Q
    |||||||||||||||||| |||| |||||||||| ||||| |||||||||||||| ||||    
T  2898197 taataattctcttttatggtatgtttaatcagtgtcccggaggcaccggttagcaggacc 2898256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 38590950 - 38590883
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttag 304  Q
    |||||| |||||||||||||||||| |||||||| ||||||||| || | ||| | ||||||||||||    
T  38590950 cagttttcttttatggtaataattcccttttatggtatgcttaaccaataccccgaggcaccggttag 38590883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 5093612 - 5093538
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||||||||| ||||||||  |||||||| |||| ||||  ||||||| ||||||||||||| || |||||||    
T  5093612 tttccttttatgataataatttccttttatggtatgtttaactagtgccccggggcaccggttaacaggaccctt 5093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 8969483 - 8969413
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagca 306  Q
    ||||||||||||||||||||||||  |||||||  |||||||||  |||| ||| ||||||||||||||||    
T  8969483 cagtttccttttatggtaataatttccttttatagtatgcttaactagtgcccctggggcaccggttagca 8969413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 28600967 - 28601017
Alignment:
Q  127 tggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||||||    
T  28600967 tggaaaatgctaaccagtgcccgggggcactggttaaggatatgaaaaagg 28601017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 32860212 - 32860289
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||||| || | |||| || |||||||    
T  32860212 cagtttccttttatg-taataattctcttttatggtatgcttaaccagtgtcccggggacagctgttaacaggaccctt 32860289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 34123101 - 34123025
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||| |||||| |||||| | |||||||||| |||| | | || |||||||||||||| ||||||    
T  34123101 cagtttccttttatggtcataattttcttttttaatatgcttaa-cagtactccggagcaccggttagcataaccctt 34123025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 561701 - 561654
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  561701 aaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 561654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 5881332 - 5881375
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaat 281  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||    
T  5881332 agtttccttttatgataataattatcttttatggtatgcttaat 5881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 13574105 - 13574031
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacc 311  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| | ||||||   | |||||||||||| ||||    
T  13574105 cagtttctttttatggtaataatttccttttatggtatgcttaacccgtgccctaagacaccggttagcaggacc 13574031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 39531933 - 39532013
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgacccttatt 317  Q
    |||||| |||||||||||||| || ||||||  ||||||||||| ||||| | | | |||||||||||||||||||| ||||    
T  39531933 cagttttcttttatggtaatattt-tctttttcgatatgcttaaccagtgtctcagaggcaccggttagcatgacccatatt 39532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 45262024 - 45262096
Alignment:
Q  241 ttccttttatggtaataatt-ctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||| || |||| || ||||||||| |  || ||||||||||||||||||||||||||    
T  45262024 ttccttttatggtaataatttcttttttttg-tatgcttaacctttgtcccgggggcaccggttagcatgaccc 45262096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 31438644 - 31438696
Alignment:
Q  126 ttggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||| |||||||||||||||| | |||| |||||||||||| |||||||||||    
T  31438644 ttgggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaagg 31438696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 31782633 - 31782565
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccc 312  Q
    ||||||||||| ||||  ||||| |  ||||||||| | ||||| ||||||||||||||||||||||||    
T  31782633 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgaccc 31782565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 27988575 - 27988499
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  27988575 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcccgggggcaccggttagcaggaccct 27988499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 28045877 - 28045801
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  28045877 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgcccgggggcaccggttagcaggaccct 28045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 20831629 - 20831553
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||||||||| |||||    
T  20831629 cagtttccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgggacaccggttagcaggaccc 20831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 34228792 - 34228868
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||    
T  34228792 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 34228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 13643125 - 13643204
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgacccttattta 319  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||  || ||||||||||||| ||||||||||||    
T  13643125 ttccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggacccttattta 13643204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 13743550 - 13743629
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgacccttattta 319  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||  || ||||||||||||| ||||||||||||    
T  13743550 ttccttttatggtaataattctcttttatggtatgcttaaccagtgccctaggagcaccggttagcaggacccttattta 13743629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 16394137 - 16394061
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| || || |||||||||||||||||||| |||||    
T  16394137 cagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 16394061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 16888620 - 16888544
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||||||||| || ||||||||| || || |||||||||||||||||||| |||||    
T  16888620 cagtttccttttatggtaataattctcttttgtggtatgcttaaccaatgccccgggggcaccggttagcaggaccc 16888544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 30675648 - 30675567
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattt 318  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||| |||||||||||| |||| ||||||    
T  30675648 cagtttccttttatggtaataattc-cttttatggtatgcttaaccagtgccccggggacaccggttagcaggacctttattt 30675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 168576 - 168653
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| || || |||||||||||||||||||| ||||||    
T  168576 cagtttccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccct 168653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 2805336 - 2805267
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagc 305  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| |||||||||||||    
T  2805336 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagc 2805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 28626878 - 28626947
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    ||||||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||    
T  28626878 cagtttctttttatgataataattcccttttatggtatgcttaatcagtgtccgggagcaccggttagca 28626947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 36730554 - 36730631
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||||||||||||||||||||||||||||||  ||||||||| | |||||| | |||||||||||||  |||||||    
T  36730554 cagtttccttttatggtaataattctcttttatagtatgcttaacctgtgccccgtggcaccggttagccagaccctt 36730631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Complemental strand, 7304594 - 7304526
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttag 304  Q
    |||||||||||||||  ||||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  7304594 cagtttccttttatgaaaataattctcttttatggtatgcttaaccagtgctccgggggcaccggttag 7304526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 9253978 - 9253899
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttat 316  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| || || ||| |||||||||||||||| |||||||||    
T  9253978 cagtttccttttatagtaataattctcttttatggtatgcttaaccaatgtcccaggggcaccggttagca-gacccttat 9253899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 4537820 - 4537741
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| | ||| ||| | |||||||||||||| ||||||||    
T  4537820 cagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcaggaccctta 4537741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 24843355 - 24843280
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||   |||| ||||||||||||| |||||    
T  24843355 cagtttccttttatgacaataattctcttttatggtatgcttaatcagtattcgggagcaccggttagcaggaccc 24843280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 33357205 - 33357146
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggca 296  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  33357205 cagtttccttttatggtaataattctcttttatggtatgcttaactagtgccccggggca 33357146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 43119327 - 43119402
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||| |||||||||| |||||||||||||||| ||||||||| || || || |||||||||||||||| |||||    
T  43119327 cagttttcttttatggtgataattctcttttatggtatgcttaaccaatggcccggggcaccggttagcaggaccc 43119402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 21595850 - 21595896
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  21595850 aaatgctaaccggtgcccccgggcactggttaagggtatgaaaaagg 21595896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 4648304 - 4648382
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccctt 314  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||| ||||  |  ||| |||||||||||||||||||||    
T  4648304 cagtttcttttgatggtaataattcccttttatgatatgcttaaccagtatcttgggagcaccggttagcatgaccctt 4648382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 9063121 - 9063051
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||| ||||| |||||||||||| ||||| |||||  ||||||||||||| ||||||    
T  9063121 cttttatggtaataattcccttttgtgatatgcttaaccagtgccccggaagcaccggttagcaggaccct 9063051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 16890556 - 16890486
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagca 306  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| | ||||| | ||||||||||||||||    
T  16890556 cagtttccttttatggtaataattcctttttatggtatgcttaaccggtgcctccggggcaccggttagca 16890486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 30675768 - 30675708
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||  ||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  30675768 attattttatgggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 30675708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 37373196 - 37373255
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||  ||| |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  37373196 attatttgatgggaaatgctaaccggtgcccccggacactggttaaggatatgaaaaagg 37373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 318
Target Start/End: Original strand, 2270639 - 2270717
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacccttattt 318  Q
    |||||||||| |||| |||| |||||| | ||||||||||  ||||| |||| |||||||||||| |||||||||||||    
T  2270639 ttccttttattgtaagaattttctttttttatatgcttaacgagtgctccggaggcaccggttagtatgacccttattt 2270717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 2490225 - 2490151
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgacccttattt 318  Q
    ||||||||||| ||||  ||||| |  ||||||||| | ||||| ||||||||||||||||||||||||||||||    
T  2490225 ttttatggtaaaaatttcctttttttgtatgcttaacccgtgcctcgggggcaccggttagcatgacccttattt 2490151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 16888726 - 16888680
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||    
T  16888726 aaatgctaaccggtgcccccgggcacaggttaaggatatgaaaaagg 16888680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 29444216 - 29444138
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    |||||| |||||||||||||||||| |||||||| |||| |||| ||||| ||||| ||||||| ||| || |||||||    
T  29444216 cagttttcttttatggtaataattcccttttatggtatgtttaaccagtgtcccggaggcaccgattaacaggaccctt 29444138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 16785196 - 16785257
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcacc 298  Q
    ||||||||||||||  |||||||||||||||||| |||| |||| | |||||| ||||||||    
T  16785196 cagtttccttttataataataattctcttttatggtatgattaacccgtgcccaggggcacc 16785257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 21595956 - 21596005
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    |||||||||||||||||| |||||| |||||||| ||||||||| |||||    
T  21595956 cagtttccttttatggtattaattcccttttatggtatgcttaaccagtg 21596005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 39406952 - 39407020
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||  |||||||  |||||||||||||||    
T  39406952 cagtttccttttatgataataattcccttttatggtatgtttaactagtgccc-cgggcaccggttagca 39407020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 42655317 - 42655272
Alignment:
Q  272 tatgcttaatcagtgcccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||    
T  42655317 tatgcttaaccggtgccctggggcaccggttagcatgacccttatt 42655272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 3930309 - 3930257
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||||||| || ||||||||  |||||||||||||||||| ||||||||    
T  3930309 cagtttccttttttgataataatttccttttatgatatgcttaaccagtgccc 3930257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 10870462 - 10870498
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgata 273  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10870462 cagtttccttttatggtaataattcccttttatgata 10870498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 12203858 - 12203902
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||||||||||| |||| || ||||||||||||||||||    
T  12203858 aaatgctaaccggtgcccccgggtaccggttaagggtatgaaaaa 12203902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 12448286 - 12448330
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||||||||||| |||| || ||||||||||||||||||    
T  12448286 aaatgctaaccggtgcccccgggtaccggttaagggtatgaaaaa 12448330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 13643002 - 13643062
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    ||||||||  ||||||||||||||||||||| | ||||||||||||||| || ||||||||    
T  13643002 attatttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg 13643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 13743427 - 13743487
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    ||||||||  ||||||||||||||||||||| | ||||||||||||||| || ||||||||    
T  13743427 attatttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaagg 13743487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 168469 - 168516
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||    
T  168469 aaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 168516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 12203964 - 12204031
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggtta 303  Q
    ||||||||||||||| ||||||||| |||||||| |||||| || ||||| ||||||| || ||||||    
T  12203964 cagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12204031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 12448392 - 12448459
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggtta 303  Q
    ||||||||||||||| ||||||||| |||||||| |||||| || ||||| ||||||| || ||||||    
T  12448392 cagtttccttttatgataataattcccttttatggtatgctgaaccagtgtcccggggacatcggtta 12448459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 20831736 - 20831689
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  20831736 aaatgctaaccggtgcccccgggacactggttaaggatatgaaaaagg 20831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 37373315 - 37373397
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattt 318  Q
    |||||| |||||||||||||||||| |||| ||| ||||||||| | ||| ||||| | ||||| ||| ||||| ||||||||    
T  37373315 cagttttcttttatggtaataattccctttcatggtatgcttaacccgtgtcccggagacaccgattaacatgatccttattt 37373397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 10618018 - 10618067
Alignment:
Q  128 ggaaaatgctaaccggtgcc-ctcgggcactggttaagggtatgaaaaag 176  Q
    |||||||||||||||||||| || |||||| |||||||| ||||||||||    
T  10618018 ggaaaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaag 10618067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 22956815 - 22956895
Alignment:
Q  237 cagtttccttttatggtaataatt--ctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||| ||||  || ||||||| |||| ||||| ||||||||  | ||||||||| || ||||||||    
T  22956815 cagtttccttttatggtaaaaattcccttttttatggtatgtttaataagtgcccgaagacaccggttaacaggaccctta 22956895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 16785090 - 16785134
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||||||||| |  ||||||||||||||| |||||||||    
T  16785090 aaatgctaaccggtgctccagggcactggttaaggatatgaaaaa 16785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 29235349 - 29235421
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||| ||||||||  |||||||   |||||||| ||||| ||||||  ||||||||||||||||||    
T  29235349 ttccttttatgataataatttccttttataggatgcttaaccagtgtcccgggaacaccggttagcatgaccc 29235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 32114025 - 32114101
Alignment:
Q  243 ccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacccttattt 318  Q
    ||||||||| ||||||||| |||||||  |||| |||| |||||| || | | |||||||||||| |||||||||||    
T  32114025 ccttttatgataataattcccttttatagtatgtttaaccagtgctccagagccaccggttagcaggacccttattt 32114101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 42035050 - 42035014
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||||||||||||||| |||||||| |||||||||    
T  42035050 cttttatggtaataattcccttttatggtatgcttaa 42035014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 43714260 - 43714184
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgcccggggg-caccggttagcatgacccttat 316  Q
    ||||||||||||||| ||||   |||| |  ||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  43714260 ttccttttatggtaaaaatttattttttttgtatgcttaaccagtgcccccgggacaccggttagcatgacccttat 43714184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 392206 - 392285
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  392206 cagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 392285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 32929584 - 32929505
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  32929584 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 32929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 35043999 - 35044074
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||    
T  35043999 cagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccccggggcaccggttaacatgaccc 35044074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 13417035 - 13416957
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||  ||||||||    
T  13417035 cagttttcttttatggtaataattctcttttataatatgcttaaccagtgcccggaggcaccggttagctggaccctta 13416957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 26467199 - 26467116
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||| |||||||| ||||  ||| ||||| ||||| ||||||||||||||||||||||| ||||    
T  26467199 agtttccttttatggtaataattcccttttatggtatgtctaaccagtgccccggaggcaccggttagcatgacccttaattat 26467116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 3026085 - 3026015
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagca 306  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  3026085 cagttttcttttatcgtaataattctcttttatggtatgcttaatcagtgtcccgagggcaccggttagca 3026015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 4215805 - 4215883
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||    
T  4215805 cagtttccttttatggtaataatttccttttatggtatgcttaaccagtgccccgggggcatcggttagcaggaccctt 4215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 32985269 - 32985199
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagca 306  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||    
T  32985269 cagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagca 32985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 22417303 - 22417360
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccggggg 294  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  22417303 cagtttccttttatgctaataattctcttttatggtatgcttaatcagtgccccgggg 22417360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 3515876 - 3515959
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattta 319  Q
    ||||||||||||||||||||||||| |||||||| |||| |||| | ||| ||| |||||||||||||||| ||||| ||||||    
T  3515876 cagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggacccatattta 3515959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 23402248 - 23402327
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| | ||| ||||| |||||||||||||| ||||||||    
T  23402248 cagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccctta 23402327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 25165489 - 25165410
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgaccctta 315  Q
    |||||| |||||||| |||||||||||||||| ||||||||||| || ||||| ||| ||||||||||||| ||||||||    
T  25165489 cagttttcttttatgataataattctcttttacgatatgcttaaccaatgccctgggagcaccggttagcaggaccctta 25165410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 320
Target Start/End: Original strand, 27433603 - 27433686
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcag-tgcccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||| |||||||| |||| |||| | | | |||||||||||||||||||| ||||||| |||||    
T  27433603 agtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagacccttctttat 27433686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 2350763 - 2350833
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcat 307  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||  ||||| | |||||||||||||    
T  2350763 agtttccttttatggtaataattcccttttatgatatgcttaaccagtaccccggagacaccggttagcat 2350833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 11115172 - 11115106
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttag 304  Q
    ||||| |||||||||||||||||| ||||||||||||| |||| |||||||| ||| ||||||||||    
T  11115172 agttttcttttatggtaataattcccttttatgatatgtttaaccagtgccccgggacaccggttag 11115106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 29978350 - 29978420
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||| ||  |||||||||||| ||||||||    
T  29978350 ttttatggtaataattcccttttatgatatgcttaaccagcgccctggaacaccggttagcaggaccctta 29978420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 12525829 - 12525912
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattta 319  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||  |||| ||| |||  ||||||||||| |||||| |||||    
T  12525829 cagtttcattttatggtaataattcccttttatgatatgcttaactagtgccccagggataccggttagcaggaccctaattta 12525912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 313
Target Start/End: Original strand, 2581065 - 2581139
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||||||| |||||||| ||||||||| || |  |||||| ||||||||||||| ||||||    
T  2581065 tttccttttatggtaataattcccttttatggtatgcttaaccaataccccgggagcaccggttagcaggaccct 2581139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 1840323 - 1840271
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||    
T  1840323 cagtttcctttcatggtaataattcccttttatgatatgtttaaccagtgccc 1840271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 12145193 - 12145117
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| ||||||||  |||||||  ||||||||| |||||| |||| |||||||||||||| |||||    
T  12145193 cagtttccttttatgataataatttccttttatagtatgcttaaccagtgctccggaggcaccggttagcaggaccc 12145117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 27433486 - 27433542
Alignment:
Q  122 tttattggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    ||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27433486 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 27433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 392099 - 392146
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  392099 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 392146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 3515769 - 3515816
Alignment:
Q  131 aaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||    
T  3515769 aaatgctaaccggtgcccccagggcactggttaagggtatgaaaaagg 3515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 7851235 - 7851192
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  7851235 cagtttccttttatggtaataattcccttttatggtatgcttaa 7851192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 34851922 - 34851876
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||    
T  34851922 tttccttttatagtaataattctcttttataatatgcttaaccagtg 34851876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 18276691 - 18276612
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatg---atatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||  ||||||||    ||||||||| ||||| ||| |||||||||||||||| |||||    
T  18276691 cagtttccttttatggtaataatttccttttatggtattatgcttaaccagtgcccctggggcaccggttagcaggaccc 18276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Original strand, 34706835 - 34706908
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgaccct 313  Q
    ||||||||||||||| ||||  ||||| |  ||||||||| |||||||| ||||||||||||||||| ||||||    
T  34706835 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagcaagaccct 34706908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 961122 - 961162
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  961122 tttccttttatgataataattctcttttatggtatgcttaa 961162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 3026190 - 3026147
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  3026190 aaatgctaactggtgccc-cgggcactggttaagggtatgaaaaa 3026147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 5323513 - 5323585
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgacc 311  Q
    |||||||||||||||||||||| |||||||| ||||| ||| | |||||| || ||||||| ||| |||||||    
T  5323513 tttccttttatggtaataattcccttttatggtatgcgtaaccggtgccctggaggcaccgattaacatgacc 5323585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 9661096 - 9661144
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    |||||||||||||||||||||||||  |||||| ||||| |||||||||    
T  9661096 cagtttccttttatggtaataattccattttataatatgtttaatcagt 9661144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 29451191 - 29451139
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| | ||||||    
T  29451191 cagtttccttttatgataataattcccttttatggtatgcttaacccgtgccc 29451139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 20897951 - 20897998
Alignment:
Q  131 aaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||    
T  20897951 aaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagg 20897998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 29978227 - 29978282
Alignment:
Q  122 tttattggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||| |||||||||||||||||  ||| |||| ||||||| |||||||||||    
T  29978227 tttattgggaaatgctaaccggtgcctccggacactagttaaggatatgaaaaagg 29978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 32929691 - 32929644
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||    
T  32929691 aaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaagg 32929644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 7851342 - 7851296
Alignment:
Q  131 aaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaag 176  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||    
T  7851342 aaatgctaaccggtgcccccagggcactggttaaggatatgaaaaag 7851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 28225337 - 28225411
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatt 317  Q
    |||||||||||||||||| |||||||| ||| ||||| ||||| ||||  ||||| |||||| | ||||||||||    
T  28225337 cttttatggtaataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtaggacccttatt 28225411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 31280433 - 31280501
Alignment:
Q  239 gtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||||||||| |||||||||||     ||| |||||||||  ||||||||| |||||||||||||| |||||    
T  31280433 gtttccttttatagtaataattct-----atggtatgcttaacgagtgcccggaggcaccggttagcaggaccc 31280501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 34650909 - 34650823
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttattt 322  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||| ||||||||    
T  34650909 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctaatttattt 34650823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 11958043 - 11957962
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||||||| ||||||||  |||||||| ||||| ||| |||||||||||||||| ||||||||||    
T  11958043 cagtttccttttatggtaataattcccttttatggcatgcttaaccagtgccccaggggcaccggttagcaggacccttatt 11957962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 13661918 - 13661995
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||| ||||| |||||||||||||| ||||||    
T  13661918 cagtttccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccct 13661995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 34651025 - 34650969
Alignment:
Q  121 atttattggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  34651025 atttattgggaaatgctaaccggtgcccccgggcactggttaagggtatgaaaaagg 34650969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 35504316 - 35504238
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||| |||||||||| |||||||| |||||||| ||||||||| | ||| ||||||||||||||||||| ||||||||    
T  35504316 cagttcccttttatggcaataattcccttttatggtatgcttaacccgtgtccgggggcaccggttagcaggaccctta 35504238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 35132640 - 35132709
Alignment:
Q  246 tttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||| |||||||    
T  35132640 tttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcaggaccctt 35132709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 4268671 - 4268749
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    |||||||||||||||||||||||| |||||| || ||||||||| | ||| || ||||||||||||||| |||||||||    
T  4268671 cagtttccttttatggtaataattttcttttttggtatgcttaacccgtgtccagggggcaccggttagtatgaccctt 4268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 8787449 - 8787527
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||| |||||||||  ||||||| ||||||||| | ||| |||||||||||||||||||| |||||||    
T  8787449 cagtttccttttatgataataattccattttatggtatgcttaacctgtgccccgggggcaccggttagcaggaccctt 8787527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 6283679 - 6283745
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatga 309  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||  |||||||||||||||||||    
T  6283679 cttttatggtaataattcatttttatggtatgcttaaccagtgccctaggggcaccggttagcatga 6283745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 10054429 - 10054353
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||||||  ||||||| |||| |||| | ||| |||||||| ||||||||||| |||||    
T  10054429 cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggaccc 10054353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 12506406 - 12506458
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||||||||| |||||||||||||||||||  |||||||| ||||||||    
T  12506406 cagtttccttttatagtaataattctcttttatggaatgcttaaccagtgccc 12506458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 35504428 - 35504376
Alignment:
Q  126 ttggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  35504428 ttgggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaagg 35504376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 39069491 - 39069527
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgc 276  Q
    |||||||||||||||||||||||||||||||||||||    
T  39069491 tttccttttatggtaataattctcttttatgatatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 320
Target Start/End: Complemental strand, 40564472 - 40564396
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||||| ||||||||| || |  |||  ||||||||||||||| ||||||| |||||    
T  40564472 ttttatggtaataattctcttttatggtatgcttaaccaataccccaagggcaccggttagcaggacccttttttat 40564396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 10054535 - 10054488
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10054535 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 10054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 9721683 - 9721597
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc-ttatttattt 322  Q
    |||||| |||||||| ||||||||| |||||||| |||| |||||   ||| |  ||||||||||||||||||||| ||||||||||    
T  9721683 cagttttcttttatgataataattcccttttatggtatgtttaattcatgcaccagggcaccggttagcatgacccattatttattt 9721597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 10956064 - 10956109
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  10956064 tttccttttatggtaataatttccttttatgatatgcttaaccagt 10956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 10069972 - 10070019
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  10069972 aaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 10070019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 11846183 - 11846234
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||| || |||||||  ||||||||| ||||||||    
T  11846183 agtttccttttatggtaataaatcccttttatagtatgcttaaccagtgccc 11846234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 13661811 - 13661858
Alignment:
Q  131 aaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  13661811 aaatgctaaccggtgcccccggagcactggttaaggatatgaaaaagg 13661858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 35132525 - 35132572
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  35132525 aaatgctaaccggtgcccccgggacactggttaaggatatgaaaaagg 35132572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 2619630 - 2619596
Alignment:
Q  251 ggtaataattctcttttatgatatgcttaatcagt 285  Q
    ||||||||||| |||||||||||||||||||||||    
T  2619630 ggtaataattcccttttatgatatgcttaatcagt 2619596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 20175344 - 20175406
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    |||||||| ||||||||| ||||||| ||||||||||  ||||| | ||| ||||||||||||    
T  20175344 cttttatgataataattcccttttataatatgcttaactagtgctctgggacaccggttagca 20175406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 20869307 - 20869344
Alignment:
Q  128 ggaaaatgctaaccggtgccctcgggcactggttaagg 165  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  20869307 ggaaaatgttaaccggtgccctcaggcactggttaagg 20869344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 39067006 - 39066973
Alignment:
Q  242 tccttttatggtaataattctcttttatgatatg 275  Q
    ||||||||||||||||||||||||||||| ||||    
T  39067006 tccttttatggtaataattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 14214121 - 14214046
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttat 316  Q
    ||||||||||||||| ||||  ||||| |  ||||||||| | ||| ||||||||||||||||||||| ||||||||    
T  14214121 ttccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagcat-acccttat 14214046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 21547470 - 21547394
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccc 312  Q
    ||||||| ||||| | ||||||||||| |||||| ||||||||| ||||  ||||| | |||||||||||| |||||    
T  21547470 cagtttcattttaagttaataattctcatttatggtatgcttaaccagtaccccggagacaccggttagcaggaccc 21547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 43786981 - 43787063
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattt 318  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  43786981 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggacccttattt 43787063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 52520791 - 52520874
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttattta 319  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| ||||||| ||||    
T  52520791 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctttttta 52520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 49893441 - 49893510
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagc 305  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  49893441 cagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagc 49893510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 39074528 - 39074608
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttat 316  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  39074528 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggacccttat 39074608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 272331 - 272406
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  272331 agtttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggaccc 272406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 4168293 - 4168372
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccctta 315  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| | ||  |||||||||||||||||||| ||||||||    
T  4168293 cagttttcttttatggtaataattctcttttatggtatgcttaacccgtaccccgggggcaccggttagcaggaccctta 4168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 18014782 - 18014861
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||| ||||||||  |||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||    
T  18014782 cagtttccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagcaagaccctta 18014861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 40362656 - 40362578
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||| |||| |||||| |||||||    
T  40362656 cagttttcttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggtaccgattagcaggaccctt 40362578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 10617357 - 10617284
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||| |||||    
T  10617357 tttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggaccc 10617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 6842729 - 6842805
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| | |||||| ||||||||| ||||| |||||||||| ||||||||| |||||    
T  6842729 cagtttccttttatggtaataattcccatttatggtatgcttaaccagtgccccgggggcagcggttagcaggaccc 6842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 46352744 - 46352820
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| | ||| ||||| |||||||||||||| |||||    
T  46352744 cagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggaccc 46352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 50395636 - 50395560
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | |||| | ||||| |||||| ||||||||    
T  50395636 tttccttttatggtaataattctcttttatgatatgattaatcagtacaccggagacaccgattagcaggaccctta 50395560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 33140995 - 33141070
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgacc 311  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||  |||||  ||||||||||||| ||||    
T  33140995 cagttttcttttatggtaataattcccttttatgatatgcttaatcagtaccccggaagcaccggttagcaagacc 33141070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 48725381 - 48725459
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||  ||| |||||||| |||||||    
T  48725381 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggaccacgggttagcaggaccctt 48725459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Original strand, 858699 - 858768
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagc 305  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| | ||| |||||||||||||||||||    
T  858699 cagtttccttttatggtaataatttccttttatggtatgcttaacccgtgccccgggggcaccggttagc 858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 43269815 - 43269738
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||| ||||||||| || |||||| ||||||||| ||||| ||||| |||||||||||||| ||||||    
T  43269815 cagtttccttttatagtaataattatcctttatggtatgcttaaccagtgccccggaggcaccggttagcaggaccct 43269738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 52552590 - 52552658
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||||| |||  |||| ||||| |||||| || |||||||||||||||    
T  52552590 cttttatggtaataattctcttttatggtatatttaaccagtgtccggggacatcggttagcatgaccc 52552658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 2505460 - 2505523
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccgg 300  Q
    |||||||||||||||||||||||| |||||||| |||| |||| |||||||| |||||||||||    
T  2505460 agtttccttttatggtaataattcccttttatggtatgtttaaccagtgccctgggggcaccgg 2505523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 7468521 - 7468595
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    |||||| |||||||| ||||||| | |||||||| |||||||||||||||||| || ||||||||||||| |||||    
T  7468521 cagttttcttttatgataataatcc-cttttatggtatgcttaatcagtgccccggagcaccggttagcaggaccc 7468595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 24488476 - 24488543
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggtta 303  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||  ||||| ||||| ||||||||||    
T  24488476 cagtttctttttatggtaataattctcttttatgatatgctgaactagtgctccgggagcaccggtta 24488543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 42964325 - 42964246
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||| ||||||| |||||||||| |||||||||||||||||| ||||| | | ||| |||||||||||| ||||||||    
T  42964325 cagttttcttttatagtaataattcacttttatgatatgcttaaccagtgtctcagggacaccggttagcaggaccctta 42964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 49529339 - 49529269
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacc 311  Q
    |||||||||||||||||||||  |||||||| |||| |||| ||||| ||||||||||||||||||| ||||    
T  49529339 tttccttttatggtaataatttccttttatggtatgtttaaccagtg-ccgggggcaccggttagcaagacc 49529269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 42548208 - 42548274
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    |||| ||||||||||||||||| |||||||| ||||||||| |||||| | ||| ||||||||||||    
T  42548208 tttcattttatggtaataattcccttttatggtatgcttaaccagtgctccgggacaccggttagca 42548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 313
Target Start/End: Complemental strand, 11308285 - 11308210
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    |||||||||||||||||||||||| |||||||| ||||||||| || || ||| ||||||||| |||||| ||||||    
T  11308285 agtttccttttatggtaataattc-cttttatggtatgcttaaccaatgccccaggggcaccgattagcaggaccct 11308210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 39074422 - 39074469
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39074422 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 39074469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 52520684 - 52520731
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  52520684 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 52520731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 2938113 - 2938039
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccct 313  Q
    |||| ||||||||||||||||| |||||||| |||||||||  |||  |||| ||||||||||||||| ||||||    
T  2938113 tttcattttatggtaataattcacttttatggtatgcttaacgagtaccccgagggcaccggttagcaggaccct 2938039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 41304113 - 41304183
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagca 306  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| || || ||||| | ||||||||||||    
T  41304113 cagtttccttttatggtaataatttccttttatggtatgcttaaccaatgccccggagacaccggttagca 41304183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 20924102 - 20924151
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||| |||||    
T  20924102 cagtttccttttaaggtaataattctcttttatggtatacttaaccagtg 20924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 41554016 - 41553964
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||||||||||||||||||| | ||||||| |||||||||  |||||||    
T  41554016 cagtttccttttatggtaataattattttttatggtatgcttaacaagtgccc 41553964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 53489900 - 53489848
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||| || |||||    
T  53489900 cagtttccttttatgataataattctattttatggtatgcttaaccaatgccc 53489848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 53490022 - 53489960
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctc---gggcactggttaagggtatgaaaaagg 177  Q
    |||||||| ||| ||||||||| |||||||| |   |||||||||||||||||||||||||||    
T  53490022 attatttaatgggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaagg 53489960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 272223 - 272270
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  272223 aaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 46352637 - 46352684
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  46352637 aaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 46352684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 49893334 - 49893381
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||    
T  49893334 aaatgctaaccggtgcccccggggcactggttaaggatatgaaaaagg 49893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 28139423 - 28139469
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgc 287  Q
    ||||||||||||||||||||| |||||||| ||| ||||| ||||||    
T  28139423 ttccttttatggtaataattcccttttatggtatacttaaacagtgc 28139469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 41554125 - 41554076
Alignment:
Q  128 ggaaaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    ||||||||||||| |||||||  | ||||||||||||| |||||||||||    
T  41554125 ggaaaatgctaactggtgccccggtgcactggttaaggatatgaaaaagg 41554076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 2362791 - 2362851
Alignment:
Q  118 attatttattggaaaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaagg 177  Q
    ||||||| |||| |||||||||||||||| | ||| ||| ||||||||| |||||||||||    
T  2362791 attattttttgggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaagg 2362851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 20923990 - 20924042
Alignment:
Q  126 ttggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||| ||||||||||||||||   |||| ||||||||||||||||||||||||    
T  20923990 ttgggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaagg 20924042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 5694431 - 5694513
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacccttattt 318  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  5694431 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcaggacccttattt 5694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 47010103 - 47010181
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccctt 314  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||||||||||||| |||||||    
T  47010103 cagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccaggggcaccggttagcaggaccctt 47010181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 15227849 - 15227929
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttat 316  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| |||||||||||||| |||||||||    
T  15227849 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcaccggttagcaagacccttat 15227929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 18043272 - 18043351
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  18043272 cagttttcttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccctta 18043351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 29657881 - 29657960
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgaccctta 315  Q
    |||||||||||| |||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||    
T  29657881 cagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcaggaccctta 29657960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 42770066 - 42769987
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||  |||||||    
T  42770066 cagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagaaccctta 42769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 51065824 - 51065745
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||| ||||||||    
T  51065824 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcaggaccctta 51065745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 38162960 - 38163046
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatttattt 322  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| | ||| |||||||||||||||||||| |||| || |||||||    
T  38162960 cagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccgggggcaccggttagcaggacctttttttattt 38163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 45431389 - 45431440
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  45431389 agtttccttttatggtaataattctcttttatgatatacttaaccagtgccc 45431440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 12072138 - 12072068
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagca 306  Q
    |||||| ||||||||||||||||||  ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  12072138 cagttttcttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagca 12072068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 14350350 - 14350277
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||||||||||||||||||| |||  ||| ||||||||| |||||||| |||||||||||||||| |||||||    
T  14350350 tttccttttatggtaataattccctta-atggtatgcttaaccagtgccccggggcaccggttagcaggaccctt 14350277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 24178539 - 24178470
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagc 305  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| ||||| |||||||||||||||||||    
T  24178539 cagtttccttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagc 24178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 30294457 - 30294381
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||| | |||| |||||| |||||||||||| |||||    
T  30294457 cagtttctttttatggtaataattcccttttatggtatgcttaacctgtgctccggggacaccggttagcaggaccc 30294381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 48383187 - 48383111
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| || |||| | ||||||| |||||||| |||||    
T  48383187 cagtttccttttatggtaataattcccttttatggtatgcttaaccaatgcctcaggggcactggttagcaggaccc 48383111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 311
Target Start/End: Original strand, 13961321 - 13961396
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacc 311  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||  ||||||||||||||| ||||    
T  13961321 cagtttcattttatggtaataattttcttttatggtatgcttaaccagtgctccaagggcaccggttagcaggacc 13961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 50128248 - 50128169
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||| |   |||||||||||| ||||||||    
T  50128248 cagtttcattttatggtaataattctcttttatggtatgcttaaccagtgtcccagaaacaccggttagcaggaccctta 50128169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 12307031 - 12307077
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgc 287  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12307031 ttccttttatggtaataattctcttttatggtatgcttaaccagtgc 12307077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 17333464 - 17333418
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||    
T  17333464 aaatgctaaccggtgcccccgggcactggttaaggatatgaaaaagg 17333418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 315
Target Start/End: Original strand, 43286833 - 43286913
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtg---cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| |||||     |||||||| ||||||||| ||||||||    
T  43286833 agtttccttttatagtaataattctcttttatggtatgcttaaccagtgtgcttcgggggcatcggttagcaggaccctta 43286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 19031891 - 19031814
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt-gcccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||  |||||||||||||||||| | ||  ||||| | |||||||||||| ||||||    
T  19031891 cagtttccttttatggtaataatttccttttatgatatgcttaacccgtaccccggagacaccggttagcaggaccct 19031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 39081910 - 39081983
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatga 309  Q
    ||||||| ||||||| |||||||| |||||| | ||||||||||||||| || |||||| ||||||||||||||    
T  39081910 cagtttcattttatgataataattttcttttttaatatgcttaatcagtacctcgggggtaccggttagcatga 39081983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 45449320 - 45449243
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||  |||||||| |||| |||| ||||| ||| |||||| ||||||||| ||||||    
T  45449320 cagtttccttttatggtaataattgccttttatggtatgtttaaccagtgccccaggggcatcggttagcaggaccct 45449243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 3097769 - 3097846
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacccttat 316  Q
    |||||| |||||||||||||||||  |||||||| ||||||||| ||||   ||||| |||||||||||| |||||||||    
T  3097769 cagttttcttttatggtaataatttccttttatggtatgcttaaccagt--acggggacaccggttagcaggacccttat 3097846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 9266804 - 9266728
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||| |||||| || |  ||||||||||||| |||||    
T  9266804 cagtttccttttatggtaataattcgcttttatggtatacttaaccagtgctccagaagcaccggttagcaggaccc 9266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 19010762 - 19010711
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||||||||||||||||||| |||||||| |||| |||| ||||||||    
T  19010762 agtttccttttatggtaataattcccttttatggtatgattaaccagtgccc 19010711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 3784782 - 3784720
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagc 305  Q
    |||||||||||||||||  |||||||| ||||||||| | ||| |||||||||||||||||||    
T  3784782 cttttatggtaataatttccttttatggtatgcttaacccgtgtcccgggggcaccggttagc 3784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 23473540 - 23473459
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||||||   |||||| |||||||||| | |||| ||| ||| ||||||||||| ||||| ||||    
T  23473540 cagtttccttttatggtaataatttctttttataatatgcttaacctgtgctccgagggtaccggttagcaggacccatatt 23473459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 38702009 - 38701935
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctt 314  Q
    |||||| ||||||||||||||||||    ||||| ||||||||| ||||| |||| ||||||||||||||| |||||||    
T  38702009 cagttttcttttatggtaataattc----ttatggtatgcttaaccagtgccccgagggcaccggttagcaggaccctt 38701935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 6770447 - 6770495
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||| ||||    
T  6770447 cagtttcattttatgataataattcccttttatgatatgcttaaccagt 6770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 38595824 - 38595752
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgcccggg-ggcaccggttagcatgaccc 312  Q
    ||||||||||||||| |||| |||||| |   |||||||| |||||||| || ||||||||||||||||||||    
T  38595824 ttccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagcatgaccc 38595752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 41730418 - 41730470
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||  |||||||    
T  41730418 cagtttccttttatgataataattcccttttatggtatgcttaacaagtgccc 41730470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 8472990 - 8472911
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||| ||||||  |||||||||||||||||| ||| ||||| ||||| |||| ||  ||||||||||| ||||||||    
T  8472990 cagtttcattttataataataattctcttttatggtatacttaaccagtgtcccgaggataccggttagcaggaccctta 8472911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 14350460 - 14350413
Alignment:
Q  131 aaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  14350460 aaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaagg 14350413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 29210416 - 29210463
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||    
T  29210416 aaatgctaaccggtgcctccggggcactggttaagggtatgaaaaagg 29210463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 29210530 - 29210581
Alignment:
Q  263 cttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgaccct 313  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||| ||||||    
T  29210530 cttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccct 29210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 38702116 - 38702069
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||    
T  38702116 aaatgctaaccggtgctcccggggcactggttaagggtatgaaaaagg 38702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 42770173 - 42770126
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||    
T  42770173 aaatgctaaccggtgcccccggggcactggttaatggtatgaaaaagg 42770126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 48071592 - 48071635
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||||||||||||||||||||||| ||||||||  |||||||||    
T  48071592 cagtttccttttatggtaataattatcttttatagtatgcttaa 48071635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 12072248 - 12072198
Alignment:
Q  128 ggaaaatgctaaccggtgccctc-gggcactggttaagggtatgaaaaagg 177  Q
    ||||||||||||||||||||| | |||||| |||||||| |||||||||||    
T  12072248 ggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaagg 12072198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 312
Target Start/End: Original strand, 30217873 - 30217946
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    ||||| |||||||||||||||||   ||||||| ||||||||| |||||||| | |||||| ||||||| |||||    
T  30217873 agttttcttttatggtaataatttctttttatggtatgcttaa-cagtgccccgaggcacctgttagcaggaccc 30217946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 51368860 - 51368810
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc 288  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||| |||||||    
T  51368860 agtttccttttatagtaataattccattttatggtatgcttaaccagtgcc 51368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 36446401 - 36446352
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    |||||||||||||| |||||||||| |||||||| |||| |||| |||||    
T  36446401 cagtttccttttatagtaataattcccttttatggtatgtttaaccagtg 36446352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 11797045 - 11796969
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctt 314  Q
    |||||| |||||||||||||| |  ||||| || ||| |||||  |||||||  || ||||||||||||||||||||    
T  11797045 agtttcgttttatggtaataacttccttttttggtatccttaactagtgccccaggacaccggttagcatgaccctt 11796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 17333426 - 17333462
Alignment:
Q  271 atatgcttaatcagtgcccgggggcaccggttagcat 307  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  17333426 atatccttaaccagtgcccgggggcaccggttagcat 17333462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 23822593 - 23822523
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgccc-gggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| |||| | |||| || ||||||||| || ||||| |||||||||||||||||||||||    
T  23822593 ttccttttatggtaagaattttttttt-tg-tatgcttaaccaatgccccgggggcaccggttagcatgaccc 23822523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 28725977 - 28725905
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| ||||  ||||| |  ||||||||| ||||| ||||||| |||||||||||| |||||    
T  28725977 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagaccc 28725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 35985697 - 35985645
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||||||| | |||||  ||| ||||| ||||||||    
T  35985697 cagtttccttttatggtaataattcccatttatagtatacttaaccagtgccc 35985645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 238 - 315
Target Start/End: Complemental strand, 12218511 - 12218434
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||| ||| |||||||||||| ||||||||    
T  12218511 agtttccttttatggtaataattctcttttatggtatgtttaaccagtgccccgggacaccggttagcaggaccctta 12218434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 24438587 - 24438663
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| |||||    
T  24438587 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcaggaccc 24438663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 42044369 - 42044293
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccct 313  Q
    |||||| |||||||||||||||||| |||||||| |||| |||| |||||||| |||||||||||||||||||||||    
T  42044369 cagttttcttttatggtaataattcccttttatggtatgtttaaccagtgccccggggcaccggttagcatgaccct 42044293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 525151 - 525076
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| | | || ||||||||||||| |||||    
T  525151 cagtttccttttatggtaataattctcttttatgatatgtttaaccagtactccggagcaccggttagcaggaccc 525076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 11686390 - 11686324
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgacc 311  Q
    |||||||||||||||||||||||||||||||||||| | || ||||| |||||||||||||| ||||    
T  11686390 ttttatggtaataattctcttttatgatatgcttaacctgtacccggaggcaccggttagcaggacc 11686324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 19434608 - 19434682
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||| |||| |||||| |  ||||||||| |||||||||||||||||||| |||||||||||||    
T  19434608 ttccttttatggtaagaattttctttttttgtatgcttaaccagtgcccgggggcaccggtcagcatgaccctta 19434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 13064952 - 13064871
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |  ||||||||||||||||  |||||||||    
T  13064952 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctctaggggcaccggttagcagaacccttatt 13064871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 24798479 - 24798403
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| |||||||  ||||||||| ||||| |||||||||||| ||||||| |||||    
T  24798479 cagtttccttttatggtaataattcccttttatagtatgcttaaccagtgccccgggggcaccagttagcaggaccc 24798403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 34333393 - 34333472
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||||||||||||||||||||||  ||||||| |||| |||| | ||| |||||||||||||||||||| ||||||||    
T  34333393 cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccctta 34333472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 47083165 - 47083232
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttag 304  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| || ||| | ||||||||||||||    
T  47083165 cagtttccttttatggtaataattcccttttatgatatgtttaaccaatgctccggggcaccggttag 47083232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 29993560 - 29993487
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| |||| ||||||||| |||||    
T  29993560 tttccttttatggtaataattcccttttatggtatgcttaaccagtgtcccggaggcatcggttagcaggaccc 29993487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 34606371 - 34606448
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||||||||||||  |||||||| ||||||||| | ||| |||||| ||||||||||||| ||||||    
T  34606371 cagtttccttttatggtaataattaccttttatggtatgcttaacccgtgccccgggagcaccggttagcaggaccct 34606448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 4628676 - 4628752
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccc 312  Q
    |||||| |||||||||||||||||| |||||||| ||||||||| |||||||   |||||||||||||||| |||||    
T  4628676 cagtttacttttatggtaataattcccttttatggtatgcttaaccagtgccttaggggcaccggttagcaggaccc 4628752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 47657096 - 47657157
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagca 306  Q
    ||||||||||||||||| |||||||| |||||||||||||||||  |  |||||||||||||    
T  47657096 ttttatggtaataattcccttttatggtatgcttaatcagtgcctcgaagcaccggttagca 47657157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 7689276 - 7689224
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  7689276 cagttttcttttatggtaataattctcttttatggtatacttaaccagtgccc 7689224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 23357786 - 23357734
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  23357786 cagtttccatttatgataataattctcttctatgatatgcttaaccagtgccc 23357734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Complemental strand, 23363243 - 23363191
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||| |||||||||||| |||| |||| ||||||||    
T  23363243 cagtttccttttatggtaatatttctcttttatggtatgtttaaccagtgccc 23363191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 45045880 - 45045932
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||    
T  45045880 cagtttccttttatgataataattcccttttatggtatgcttaaccagtgccc 45045932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 34333287 - 34333334
Alignment:
Q  131 aaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  34333287 aaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 34333334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 28587913 - 28587959
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  28587913 aaatgctaaccggtgcccccggacactggttaaggatatgaaaaagg 28587959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 38128406 - 38128480
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtgcccggg-ggcaccggttagcatgaccctt 314  Q
    ||||||||||||||| ||||  ||||| |  ||||||||| |||||||| || ||||||||||||||||||||||    
T  38128406 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagcatgaccctt 38128480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 43594112 - 43594063
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||| |||||    
T  43594112 cagtttcctcttatgataataattctcttttatggtatgcttaaccagtg 43594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 5239395 - 5239471
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||   ||| ||| ||||||| |||||||| |||||    
T  5239395 cagtttctttttatggtaataattcccttttatggtatgcttaacttgtgcccccggggcactggttagcaggaccc 5239471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 311
Target Start/End: Original strand, 5729463 - 5729531
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgacc 311  Q
    ||||||| |||||||||||||||||||  |||||||| ||||||| ||| ||||| |||||||| ||||    
T  5729463 cttttatagtaataattctcttttatggcatgcttaaccagtgcctcggaggcacaggttagcaggacc 5729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 13106498 - 13106466
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaa 163  Q
    |||||||||||||||||||||||||||||||||    
T  13106498 aaatgctaaccggtgccctcgggcactggttaa 13106466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24438475 - 24438527
Alignment:
Q  126 ttggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    |||| |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  24438475 ttgggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaagg 24438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 28262136 - 28262188
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||| || |||||    
T  28262136 cagtttccttttatagtaataattcttttttatggtatgcttaaccaatgccc 28262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 47839602 - 47839654
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||||||| |||||||| ||||  ||| ||||||||    
T  47839602 cagtttccttttatggtaataattcccttttatggtatgaataaccagtgccc 47839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 315
Target Start/End: Original strand, 30810765 - 30810844
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    |||||| ||||||||||||||||| ||||||||| |||| |||| || || ||| |||| ||||||||| | ||||||||    
T  30810765 cagttttcttttatggtaataattttcttttatggtatgtttaaccaatgccccaggggtaccggttagtaggaccctta 30810844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 33636570 - 33636613
Alignment:
Q  245 ttttatggtaataattctcttttatgatatgcttaatcagtgcc 288  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||    
T  33636570 ttttatggtaataattctattttatggtatgcttaaccagtgcc 33636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 313
Target Start/End: Original strand, 6820026 - 6820100
Alignment:
Q  239 gtttccttttatggtaataattctcttttatgatatgcttaatcagtgcccgggggcaccggttagcatgaccct 313  Q
    ||||| ||||||||||||||||  ||||| |   || ||||| ||||||||  ||||||||||||||||||||||    
T  6820026 gtttcattttatggtaataattaccttttttagcatccttaaccagtgccctagggcaccggttagcatgaccct 6820100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 24798585 - 24798539
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||||    
T  24798585 aaatgctaaccggtgcccccgggcacttgttgaggatatgaaaaagg 24798539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 34556931 - 34556886
Alignment:
Q  272 tatgcttaatcagtgcccgggggcaccggttagcatgacccttattt 318  Q
    ||||||||| |||||||||||| ||||||||||||||||||| ||||    
T  34556931 tatgcttaaccagtgcccgggg-caccggttagcatgaccctaattt 34556886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 8754768 - 8754723
Alignment:
Q  131 aaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaa 175  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||    
T  8754768 aaatgctaaccggtgccctgggagcactggttaaggatatgaaaaa 8754723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 6097451 - 6097523
Alignment:
Q  241 ttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| ||||  ||||| | |||||||||| | ||| ||||| ||||| ||||||||||||||    
T  6097451 ttccttttatggtaagaatttcctttttttatatgcttaacccgtgccccggaggcactggttagcatgaccc 6097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 6820094 - 6820062
Alignment:
Q  133 atgctaaccggtgccctcgggcactggttaagg 165  Q
    ||||||||||||||||| |||||||||||||||    
T  6820094 atgctaaccggtgccctagggcactggttaagg 6820062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 18486071 - 18486123
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| | ||||||    
T  18486071 cagtttccttttatggtaataatttcattttatggtatgcttaacccgtgccc 18486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 24798559 - 24798607
Alignment:
Q  283 agtgcccgggggcaccggttagcatgacccttatttatttcatgcttct 331  Q
    |||||||||||||||||||||||||  ||||||||| ||| ||| ||||    
T  24798559 agtgcccgggggcaccggttagcatttcccttatttttttaatgattct 24798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 27456295 - 27456251
Alignment:
Q  131 aaatgctaaccggtgccctcgggcactggttaagggtatgaaaaa 175  Q
    |||||||||| ||||||| |||||||||||||||| |||| ||||    
T  27456295 aaatgctaactggtgcccccgggcactggttaaggatatggaaaa 27456251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 47118065 - 47118037
Alignment:
Q  237 cagtttccttttatggtaataattctctt 265  Q
    |||||||||||||||||||||||||||||    
T  47118065 cagtttccttttatggtaataattctctt 47118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 10820 - 10896
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgcc-cgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||||||||||||| | |||||| ||||||||| ||||||| |||||||| ||||||||| |||||    
T  10820 cagtttccttttatggtaataattcccatttatggtatgcttaaccagtgcctcgggggcagcggttagcaggaccc 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 6186 - 6107
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccctta 315  Q
    ||||||||||||||||||||||| | |||||||| |||| |||| | ||| |||||||||||||||||||| ||||||||    
T  6186 cagtttccttttatggtaataatccccttttatggtatgtttaacccgtgccccgggggcaccggttagcaggaccctta 6107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 6293 - 6246
Alignment:
Q  131 aaatgctaaccggtgccc-tcgggcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||    
T  6293 aaatgctaaccggtgcccctggggcactggttaaggatatgaaaaagg 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 320
Target Start/End: Complemental strand, 53760 - 53677
Alignment:
Q  238 agtttccttttatggtaataattctcttttatgatatgcttaatcag-tgcccgggggcaccggttagcatgacccttatttat 320  Q
    |||||||||||||||||||||||| |||||||| |||| |||| | | | |||||||||||||||||||| ||||||| |||||    
T  53760 agtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagcaagacccttctttat 53677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 53877 - 53821
Alignment:
Q  122 tttattggaaaatgctaaccggtgccctcggg-cactggttaagggtatgaaaaagg 177  Q
    ||||| || |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  53877 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaagg 53821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 15006 - 15087
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatt 317  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||| ||||| || ||||| ||||    
T  15006 cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccggaggcactggttaacaggacccatatt 15087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 938 - 987
Alignment:
Q  240 tttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  938 tttccttttatagtaataattctcttttatggtatgcttaaccagtgccc 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 23071 - 23148
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccct 313  Q
    ||||||||||||||| |||||||||||||||||| |||| |||| ||||| |||  || |||||||||||| ||||||    
T  23071 cagtttccttttatgttaataattctcttttatggtatgtttaaccagtgccccaaggacaccggttagcaagaccct 23148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 22964 - 23011
Alignment:
Q  131 aaatgctaaccggtgccctcgg-gcactggttaagggtatgaaaaagg 177  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  22964 aaatgctaaccggtgcccccggagcactggttaaggatatgaaaaagg 23011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 402 - 450
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    |||||||||| || ||||||||||||||||||||||||| |||||||||    
T  402 cagtttccttctacggtaataattctcttttatgatatgattaatcagt 450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 41029 - 41105
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgaccc 312  Q
    ||||||||||||||| ||||||||  |||||||||||||||||| ||||| ||||| | |||||||| ||| |||||    
T  41029 cagtttccttttatgataataatttccttttatgatatgcttaaccagtgtcccggagacaccggttggcaggaccc 41105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 19661 - 19612
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtg 286  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  19661 cagtttccttttacgataatagttctcttttatgatatgattaatcagtg 19612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 68366 - 68318
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagt 285  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  68366 cagtttccttttaaggtaataattcccttttatggtatgcttaaccagt 68318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 53417 - 53358
Alignment:
Q  253 taataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacc 311  Q
    |||||||||||||||||| |||||||||  |||| ||||| |||||||||||||| ||||    
T  53417 taataattctcttttatggtatgcttaactagtgccccggaggcaccggttagcaggacc 53358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 233963 - 234050
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgc-ccgggggcaccggttagcatga-cccttatttattt 322  Q
    |||||||||||||||  |||||||  |||||||| |||| |||| | || | ||||||||||||||||||| || |||||||||||||    
T  233963 cagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccgggggcaccggttagcaggaccccttatttattt 234050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 317
Target Start/End: Original strand, 25835 - 25909
Alignment:
Q  244 cttttatggtaataattctcttttatgatatgcttaatcagtg-cccgggggcaccggttagcatgacccttatt 317  Q
    |||||||||||||||||| |||||||| ||| ||||| ||||| ||||  ||||| |||||| | ||||||||||    
T  25835 cttttatggtaataattcccttttatggtatccttaaacagtgacccgaaggcacaggttagtaggacccttatt 25909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 790 - 831
Alignment:
Q  239 gtttccttttatggtaataattctcttttatgatatgcttaa 280  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  790 gttttcttttatggtgataattctcttttatggtatgcttaa 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 116314 - 116366
Alignment:
Q  237 cagtttccttttatggtaataattctcttttatgatatgcttaatcagtgccc 289  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||| | ||||||    
T  116314 cagtttccttttatgataataattcccttttatggtatgtttaacccgtgccc 116366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University