View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1150_low_43 (Length: 374)

Name: NF1150_low_43
Description: NF1150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1150_low_43
NF1150_low_43
[»] chr4 (39 HSPs)
chr4 (30-272)||(12205831-12206073)
chr4 (272-360)||(43509409-43509497)
chr4 (285-360)||(8063082-8063157)
chr4 (285-360)||(38491763-38491838)
chr4 (286-360)||(31945753-31945827)
chr4 (272-360)||(52122189-52122277)
chr4 (285-360)||(1177497-1177572)
chr4 (273-360)||(39958320-39958407)
chr4 (270-360)||(5324987-5325077)
chr4 (271-360)||(51859313-51859402)
chr4 (284-360)||(40694588-40694664)
chr4 (285-360)||(19739167-19739242)
chr4 (285-360)||(24784989-24785064)
chr4 (285-360)||(24823202-24823277)
chr4 (285-360)||(42472151-42472226)
chr4 (285-361)||(3402559-3402635)
chr4 (285-360)||(42629980-42630055)
chr4 (303-360)||(258627-258684)
chr4 (303-360)||(53324733-53324790)
chr4 (286-360)||(36511456-36511530)
chr4 (303-367)||(10258561-10258625)
chr4 (304-360)||(44521568-44521624)
chr4 (290-360)||(6070911-6070981)
chr4 (273-323)||(14796096-14796146)
chr4 (285-360)||(52573681-52573748)
chr4 (303-360)||(28377557-28377614)
chr4 (303-360)||(46431483-46431540)
chr4 (285-360)||(31227549-31227623)
chr4 (284-360)||(24793238-24793307)
chr4 (286-360)||(3108818-3108884)
chr4 (276-324)||(17892812-17892860)
chr4 (292-360)||(27982452-27982520)
chr4 (303-360)||(7952681-7952738)
chr4 (303-360)||(44121415-44121472)
chr4 (303-360)||(51675305-51675361)
chr4 (276-360)||(25699953-25700037)
chr4 (327-360)||(52721988-52722021)
chr4 (286-322)||(2586891-2586927)
chr4 (276-324)||(36944242-36944290)
[»] chr7 (41 HSPs)
chr7 (271-360)||(1042551-1042640)
chr7 (273-360)||(12103489-12103576)
chr7 (273-360)||(19511212-19511299)
chr7 (272-360)||(40096715-40096803)
chr7 (273-360)||(4292214-4292301)
chr7 (285-360)||(48154567-48154642)
chr7 (272-360)||(9249708-9249796)
chr7 (272-360)||(9283258-9283346)
chr7 (272-360)||(25970137-25970225)
chr7 (272-360)||(26773064-26773152)
chr7 (271-360)||(34122116-34122205)
chr7 (271-360)||(42897448-42897537)
chr7 (288-360)||(554420-554492)
chr7 (285-360)||(27554842-27554917)
chr7 (285-360)||(36413885-36413960)
chr7 (285-360)||(47237731-47237806)
chr7 (271-360)||(26973575-26973664)
chr7 (276-360)||(38065232-38065316)
chr7 (285-360)||(39521622-39521696)
chr7 (285-360)||(21180355-21180430)
chr7 (286-356)||(47718678-47718748)
chr7 (303-360)||(16563758-16563815)
chr7 (303-360)||(16601847-16601904)
chr7 (303-360)||(27397120-27397177)
chr7 (303-359)||(26843574-26843630)
chr7 (303-360)||(8029354-8029411)
chr7 (285-360)||(24956760-24956834)
chr7 (272-360)||(34238622-34238702)
chr7 (285-360)||(48163974-48164041)
chr7 (303-360)||(35160399-35160456)
chr7 (286-322)||(11830777-11830813)
chr7 (285-349)||(23078612-23078676)
chr7 (285-324)||(16851386-16851425)
chr7 (285-360)||(21409903-21409970)
chr7 (290-360)||(36661518-36661580)
chr7 (151-250)||(11705128-11705227)
chr7 (285-324)||(27354516-27354555)
chr7 (272-323)||(36757513-36757564)
chr7 (272-323)||(36767037-36767088)
chr7 (303-360)||(29188853-29188910)
chr7 (303-360)||(35136544-35136601)
[»] chr1 (37 HSPs)
chr1 (274-360)||(37346330-37346416)
chr1 (271-360)||(6915835-6915924)
chr1 (271-360)||(36363036-36363125)
chr1 (272-360)||(38331495-38331583)
chr1 (273-360)||(3427903-3427990)
chr1 (285-360)||(28948191-28948266)
chr1 (285-360)||(52894688-52894763)
chr1 (285-360)||(8133225-8133300)
chr1 (285-360)||(37104696-37104771)
chr1 (272-360)||(30324763-30324851)
chr1 (286-360)||(10822911-10822985)
chr1 (273-360)||(20409084-20409171)
chr1 (285-360)||(25257659-25257734)
chr1 (303-360)||(13012391-13012448)
chr1 (276-360)||(29862318-29862402)
chr1 (285-360)||(34431943-34432018)
chr1 (286-360)||(9782162-9782236)
chr1 (303-360)||(31652818-31652875)
chr1 (285-360)||(29168465-29168540)
chr1 (286-360)||(32380585-32380659)
chr1 (303-360)||(4027369-4027426)
chr1 (303-360)||(38218881-38218938)
chr1 (303-359)||(5985234-5985292)
chr1 (285-360)||(33040896-33040971)
chr1 (276-360)||(34096073-34096152)
chr1 (285-360)||(2472246-2472320)
chr1 (285-323)||(1037062-1037100)
chr1 (285-323)||(1043968-1044006)
chr1 (286-360)||(2364894-2364968)
chr1 (285-360)||(43190306-43190373)
chr1 (303-360)||(3703829-3703886)
chr1 (303-360)||(10764153-10764210)
chr1 (303-360)||(28658404-28658461)
chr1 (273-312)||(38949231-38949270)
chr1 (327-360)||(14334815-14334848)
chr1 (327-360)||(36551922-36551955)
chr1 (273-313)||(24852080-24852120)
[»] chr5 (38 HSPs)
chr5 (271-360)||(10657504-10657593)
chr5 (285-360)||(39689713-39689788)
chr5 (272-360)||(25750123-25750211)
chr5 (276-360)||(27938676-27938760)
chr5 (285-360)||(1638778-1638853)
chr5 (285-360)||(30776820-30776895)
chr5 (285-360)||(30919203-30919278)
chr5 (285-360)||(32707164-32707239)
chr5 (273-360)||(41392220-41392307)
chr5 (285-360)||(7629563-7629638)
chr5 (270-356)||(17137694-17137780)
chr5 (285-361)||(1795910-1795986)
chr5 (285-356)||(9793356-9793427)
chr5 (290-360)||(34032883-34032953)
chr5 (273-360)||(26793965-26794052)
chr5 (285-361)||(21252001-21252077)
chr5 (286-360)||(7977707-7977781)
chr5 (303-360)||(35745938-35745995)
chr5 (286-360)||(42365628-42365702)
chr5 (286-355)||(14836845-14836914)
chr5 (271-324)||(18001476-18001529)
chr5 (303-360)||(43357304-43357361)
chr5 (285-360)||(26716792-26716867)
chr5 (285-360)||(26986532-26986607)
chr5 (285-360)||(33830649-33830716)
chr5 (303-360)||(5985480-5985537)
chr5 (291-348)||(11907836-11907893)
chr5 (303-360)||(1921298-1921357)
chr5 (284-359)||(22738370-22738446)
chr5 (292-355)||(21317725-21317788)
chr5 (303-360)||(12190937-12190994)
chr5 (303-360)||(30284121-30284178)
chr5 (285-360)||(3701604-3701671)
chr5 (326-360)||(41233834-41233868)
chr5 (276-314)||(41233867-41233905)
chr5 (303-360)||(5722537-5722594)
chr5 (327-360)||(32625335-32625368)
chr5 (327-360)||(39796511-39796544)
[»] scaffold0250 (1 HSPs)
scaffold0250 (274-360)||(6186-6272)
[»] chr3 (45 HSPs)
chr3 (271-360)||(1678654-1678743)
chr3 (273-360)||(28882053-28882140)
chr3 (285-361)||(37996286-37996362)
chr3 (285-360)||(1529079-1529154)
chr3 (285-360)||(7328272-7328347)
chr3 (273-360)||(39664935-39665022)
chr3 (285-360)||(40499442-40499517)
chr3 (273-360)||(42230414-42230501)
chr3 (271-360)||(28705795-28705884)
chr3 (276-360)||(22289212-22289296)
chr3 (285-360)||(52684961-52685036)
chr3 (285-360)||(25936063-25936138)
chr3 (285-360)||(35390403-35390478)
chr3 (285-361)||(22311387-22311463)
chr3 (284-360)||(22610261-22610337)
chr3 (303-360)||(33241392-33241449)
chr3 (273-360)||(10224123-10224210)
chr3 (285-360)||(21005772-21005847)
chr3 (285-359)||(13748024-13748098)
chr3 (285-359)||(19421953-19422027)
chr3 (303-360)||(29916309-29916366)
chr3 (303-360)||(29965462-29965519)
chr3 (271-324)||(2123258-2123311)
chr3 (303-360)||(52501262-52501319)
chr3 (285-361)||(19877744-19877820)
chr3 (289-360)||(41741675-41741746)
chr3 (271-357)||(7754626-7754712)
chr3 (303-357)||(13352746-13352800)
chr3 (303-360)||(45348092-45348149)
chr3 (303-360)||(45532064-45532121)
chr3 (285-360)||(52121821-52121888)
chr3 (303-360)||(48333459-48333516)
chr3 (303-360)||(48334404-48334461)
chr3 (292-355)||(8352027-8352090)
chr3 (303-360)||(19349142-19349199)
chr3 (304-361)||(45056822-45056879)
chr3 (315-360)||(50286762-50286807)
chr3 (303-360)||(53192954-53193011)
chr3 (285-360)||(213034-213109)
chr3 (318-360)||(13803388-13803430)
chr3 (286-360)||(30786246-30786320)
chr3 (327-360)||(7899266-7899299)
chr3 (327-360)||(28969049-28969082)
chr3 (327-360)||(42464165-42464198)
chr3 (335-367)||(28548555-28548587)
[»] chr8 (32 HSPs)
chr8 (273-360)||(32878114-32878201)
chr8 (276-360)||(6029118-6029202)
chr8 (285-360)||(34900356-34900431)
chr8 (285-361)||(4246982-4247058)
chr8 (285-360)||(22200805-22200880)
chr8 (271-360)||(16385094-16385183)
chr8 (284-360)||(36484482-36484558)
chr8 (285-360)||(28875550-28875625)
chr8 (303-360)||(25022810-25022867)
chr8 (297-360)||(2871500-2871563)
chr8 (286-360)||(37372764-37372838)
chr8 (303-360)||(19436910-19436967)
chr8 (303-360)||(19573059-19573116)
chr8 (303-360)||(19947380-19947437)
chr8 (285-360)||(13422677-13422752)
chr8 (285-353)||(45216207-45216275)
chr8 (303-360)||(37669626-37669683)
chr8 (303-360)||(43770706-43770763)
chr8 (285-357)||(3892479-3892551)
chr8 (272-360)||(5540479-5540559)
chr8 (285-360)||(32425421-32425496)
chr8 (292-361)||(33123-33192)
chr8 (286-360)||(5817867-5817933)
chr8 (285-360)||(32638199-32638274)
chr8 (285-360)||(12579522-12579589)
chr8 (284-324)||(32760441-32760481)
chr8 (292-360)||(17702914-17702982)
chr8 (271-366)||(7412948-7413043)
chr8 (318-357)||(38389211-38389250)
chr8 (274-324)||(8170512-8170562)
chr8 (303-360)||(30804254-30804311)
chr8 (328-360)||(41098489-41098521)
[»] chr6 (19 HSPs)
chr6 (274-360)||(234833-234919)
chr6 (285-360)||(1035801-1035876)
chr6 (285-360)||(19128672-19128747)
chr6 (285-360)||(31186939-31187014)
chr6 (273-360)||(32018713-32018800)
chr6 (273-360)||(31738141-31738228)
chr6 (303-360)||(13607299-13607356)
chr6 (303-360)||(3213202-3213259)
chr6 (303-360)||(32130062-32130119)
chr6 (284-359)||(4153065-4153140)
chr6 (285-324)||(7187772-7187811)
chr6 (271-324)||(6707503-6707556)
chr6 (297-360)||(7255457-7255520)
chr6 (327-360)||(10893749-10893782)
chr6 (303-356)||(13060896-13060949)
chr6 (305-360)||(3299968-3300023)
chr6 (297-360)||(8357939-8357994)
chr6 (303-360)||(13044903-13044960)
chr6 (327-360)||(26327861-26327894)
[»] chr2 (37 HSPs)
chr2 (274-360)||(5371619-5371705)
chr2 (271-360)||(28746170-28746259)
chr2 (276-360)||(6496648-6496732)
chr2 (272-360)||(10574019-10574107)
chr2 (292-360)||(12819863-12819930)
chr2 (285-360)||(7877181-7877256)
chr2 (285-360)||(14216760-14216835)
chr2 (303-360)||(3564361-3564418)
chr2 (271-360)||(4562307-4562396)
chr2 (276-360)||(40431532-40431616)
chr2 (285-356)||(12206688-12206759)
chr2 (303-360)||(4169523-4169580)
chr2 (303-360)||(18301604-18301661)
chr2 (276-360)||(8482429-8482513)
chr2 (293-360)||(37354492-37354559)
chr2 (273-360)||(6125229-6125308)
chr2 (284-360)||(34146720-34146789)
chr2 (303-351)||(1006039-1006087)
chr2 (289-360)||(3545090-3545161)
chr2 (272-360)||(7806839-7806919)
chr2 (303-361)||(16562275-16562333)
chr2 (303-361)||(20537384-20537442)
chr2 (303-360)||(22571466-22571523)
chr2 (276-360)||(5588560-5588644)
chr2 (303-367)||(24586046-24586110)
chr2 (292-356)||(33737437-33737501)
chr2 (276-360)||(40536734-40536818)
chr2 (276-360)||(35342856-35342946)
chr2 (285-360)||(35997048-35997123)
chr2 (309-360)||(44157114-44157165)
chr2 (285-324)||(4356414-4356453)
chr2 (285-360)||(22485327-22485394)
chr2 (303-360)||(2319813-2319870)
chr2 (292-361)||(45157074-45157143)
chr2 (302-368)||(43215116-43215182)
chr2 (327-360)||(40307864-40307897)
chr2 (325-353)||(13995259-13995287)
[»] scaffold0177 (1 HSPs)
scaffold0177 (285-360)||(24882-24957)
[»] scaffold0836 (1 HSPs)
scaffold0836 (292-360)||(4978-5046)
[»] scaffold0640 (1 HSPs)
scaffold0640 (272-360)||(7416-7496)
[»] scaffold0005 (1 HSPs)
scaffold0005 (273-323)||(43585-43635)
[»] scaffold0060 (1 HSPs)
scaffold0060 (285-360)||(29637-29704)
[»] scaffold0240 (1 HSPs)
scaffold0240 (276-360)||(11138-11222)
[»] scaffold0285 (1 HSPs)
scaffold0285 (328-360)||(13937-13969)


Alignment Details
Target: chr4 (Bit Score: 171; Significance: 9e-92; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 12206073 - 12205831
Alignment:
Q  30 ggttcacaatggtcgaataatgaaccatcagtggcctcataatgacccatctacttaatacctacaaacaggcacaacgcttgtcaagaacgctcgcaca 129  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  12206073 ggttcacaatggtcgaataatgaaccattagtggccccacaatgacccatctacttaatacctacaaacaggcacaacacttgtcaagaacgctcgtaca 12205974  T
Q  130 aatcaatatgggctcatcatggcatagaacggggtctcaagaagacctcatttacaatcttatcatccaacagtcattactgatccccaatgactatata 229  Q
    |||||||||||||||||||||||| | |||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  12205973 aatcaatatgggctcatcatggcacataacggtatctcaagtagacctcatttacaatcttatcatccaacggtcattactgatccctaatgactatata 12205874  T
Q  230 agtgtggcacctctgtcacgctaggtgcacaatcacttcatac 272  Q
     ||||||||  |||||||| | ||||||||||||| |||||||    
T  12205873 tgtgtggcaaatctgtcacaccaggtgcacaatcatttcatac 12205831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 43509409 - 43509497
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43509409 cctgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 43509497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 8063082 - 8063157
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  8063082 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 8063157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 38491763 - 38491838
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  38491763 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 38491838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 31945753 - 31945827
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  31945753 atacgagatacgatacggatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaattaagatacgata 31945827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 52122189 - 52122277
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  52122189 cctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 52122277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 1177572 - 1177497
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  1177572 gatacgagatacgatacggatacgatactgcactgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 1177497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 39958407 - 39958320
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  39958407 ctgtgaagtccgaatacgagatacgatacggatacgatactgcaccgatacgctgatacgaaaaaatttcaaaaatcaagatacgata 39958320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 5324987 - 5325077
Alignment:
Q  270 tacctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||    
T  5324987 tacctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacgaaaaaatttcaaaaatcaagatacgata 5325077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 51859402 - 51859313
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| || ||||| ||||||||||| ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  51859402 acctgtgaagcctggatacaagatacgatacagatacgatactgcaccgatacgccgacacgggaaaatttcaaaaatcaagatacgata 51859313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 40694664 - 40694588
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  40694664 agatacgagatacgatacggatacaatactgcacgaatacgttgatacgggaaaatttcaaaaattaagatacgata 40694588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 19739242 - 19739167
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  19739242 gatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 19739167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 24785064 - 24784989
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  24785064 gatacgagatacgatacagatacaatactgcaccgatacgttgatacggaaaattttcaaaaatcaagatacgata 24784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 24823202 - 24823277
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  24823202 gatacgagatacgatacagatacaatactgcaccgatacgttgatacggaaaattttcaaaaatcaagatacgata 24823277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 42472151 - 42472226
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||| ||||||||||||||   |||||| ||||||||||||||||||||||||||    
T  42472151 gatacgagatacgatacggatacgacactgcaccgatacgccaatacggaaaaatttcaaaaatcaagatacgata 42472226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 3402559 - 3402635
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||||||||||||||||||||||| || |||||||||| |||| || ||||||| |||||||||||||||||||    
T  3402559 gatacgagatacgatacggatacgatattgtaccgatacgtcgatatggaaaaattttaaaaatcaagatacgatat 3402635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 42629980 - 42630055
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  42629980 gatacaagatacgatatagatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaattaagatacgata 42630055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 258627 - 258684
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  258627 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 258684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 53324790 - 53324733
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  53324790 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 53324733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 36511456 - 36511530
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |||||||||||||||||||||| ||||||  |||| |||||||||| |||| |||||||||||||    
T  36511456 atacgagatgcgatacggatacgatactgcactgatacgccgatatgggaaaattttaaaagtcaagatacgata 36511530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 10258625 - 10258561
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatattgttgg 367  Q
    |||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||| |||||    
T  10258625 gatacgatactgcaccgatacgtcaatacgaaaaaatttcaaaaatcaagatacgatatggttgg 10258561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 44521568 - 44521624
Alignment:
Q  304 atacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  44521568 atacgatactgcaccgatacgtctatacggaaaaatttcaaaaatcaagatacgata 44521624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 6070911 - 6070981
Alignment:
Q  290 gagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||| |||||| ||||||| |||||||||||||| | ||||||| |||||| |||||||||||    
T  6070911 gagatacgatacagatacgttactgcatcgatacgttgatacagaaaaatttaaaaaataaagatacgata 6070981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 14796146 - 14796096
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  14796146 ctgtgaagcccagatacgagatacgatacggatacgatactgcaccgatac 14796096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 52573748 - 52573681
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  52573748 gatacgagatacgatacggatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 52573681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 28377614 - 28377557
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  28377614 gatacgatactgcactgatacgccgatacgagaaaatttcaaaaatcaagatacgata 28377557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 46431483 - 46431540
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||| || ||||||  ||||||||||||||||||||||||||    
T  46431483 gatacgatactgcaccgatatgtcgatacgaaaaaatttcaaaaatcaagatacgata 46431540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 31227623 - 31227549
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||  ||||||||||||||||||||   ||||| | |||||||||||||| |||||||||||    
T  31227623 gatacgagatacgatacatatacgatactgcaccgatactccgatac-gaaaaatttcaaaaattaagatacgata 31227549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 24793238 - 24793307
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||| |||||||||||||||||||||   || |    ||||||||||||||||||||||||||    
T  24793238 agatacgagatacgatacagatacgatactgcaccgatac---gaaa----aaaatttcaaaaatcaagatacgata 24793307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 3108818 - 3108884
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||| ||||  |||      ||||||||||||||||||||||||||    
T  3108818 atacgagatacgatacggatacgatactgcaccaatac--tga------aaaatttcaaaaatcaagatacgata 3108884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 17892860 - 17892812
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  17892860 tgaagcctggatacgagatacgatacggatacgatattgcaccgatacg 17892812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 27982520 - 27982452
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| ||||||||||  |||||||||  |||||||| ||||||| |||| |||||||||||||    
T  27982520 gatacgatacagatacgatacgacaccgatacagtgatacggaaaaattttaaaattcaagatacgata 27982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 7952681 - 7952738
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |||| ||||||  |||| || ||||||||||||||||||||||||||    
T  7952681 gatacgatacggcactgatacgccgatatggaaaaatttcaaaaatcaagatacgata 7952738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 44121415 - 44121472
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||| |||||||||| |||||| |||||||| |||| | |||||||||||    
T  44121415 gatacgatactgtaccgatacgtcgatacgagaaaattttaaaatttaagatacgata 44121472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 51675361 - 51675305
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| ||||||||||||| | ||||||| |||||||||||||||||||| ||||||||    
T  51675361 gatatgatactgcaccgacatgttgata-gggaaaatttcaaaaatcaaaatacgata 51675305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 25700037 - 25699953
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||||||||  |||| ||||| |||||||||| |||| |||| |  |||| |||||||||| |||| |||||||||||||    
T  25700037 tgaagcctagatacatgatatgatactgatacgatacggcactgatatgccgataagggaaaattttaaaattcaagatacgata 25699953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 52722021 - 52721988
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||||||||||||||||||||||||||    
T  52722021 gatatgggaaaatttcaaaaatcaagatacgata 52721988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 2586927 - 2586891
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgata 322  Q
    ||||||| || ||||||||||||||||||||||||||    
T  2586927 atacgagttatgatacggatacgatactgcaccgata 2586891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 36944290 - 36944242
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||  |||| || ||||||||||||||||||||||||| ||||||    
T  36944290 tgaagtccggatatgaaatacgatacggatacgatactgcactgatacg 36944242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 1042551 - 1042640
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1042551 acctgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 1042640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 12103576 - 12103489
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12103576 ctgtgaagcccagatacgagatacgatacggatacgatactgcaccgatacgctgatacggaaaaatttcaaaaatcaagatacgata 12103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 19511299 - 19511212
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19511299 ctgtgaagcctggatacgagatacgatacagatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 19511212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 40096803 - 40096715
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  40096803 cctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 40096715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 4292301 - 4292214
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || |||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4292301 ctgtgaagcctggatacgtgatacgatatggatacgatactgcaccgatacgttgatatgggaaaatttcaaaaatcaagatacgata 4292214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 48154642 - 48154567
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  48154642 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgata 48154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 9249708 - 9249796
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  9249708 cctgtgaagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 9249796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 9283258 - 9283346
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  9283258 cctgtgaagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 9283346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 25970225 - 25970137
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  25970225 cctgtgaagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 25970137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 26773064 - 26773152
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| || ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  26773064 cctgtgaagcctggatacgagaaacgatacggatacgatactgcactgatacgtcgatacgggaaaattttaaaaatcaagatacgata 26773152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 34122116 - 34122205
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||    
T  34122116 acctgtgaagcccggatacgagatacgatacggatacgatactgcactgatacgtcgatacgaaaaaatttcaaaaatcaagatacgata 34122205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 42897537 - 42897448
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  42897537 acctgtgaagcccggatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 42897448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 554420 - 554492
Alignment:
Q  288 acgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  554420 acgagatacgatacggatacaatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgata 554492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 27554842 - 27554917
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  27554842 gatacgagatacgatacgtatacgatactgcaccgatacgctgatacggaaaaatttcaaaaattaagatacgata 27554917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 36413960 - 36413885
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  36413960 gatacgagatacgatacgaatatgatactgcactgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 36413885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 47237731 - 47237806
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  47237731 gatacgagatacgatacagatacgatactgcaccgatatgttaatatgggaaaatttcaaaaatcaagatacgata 47237806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 26973664 - 26973575
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  |||||||||||||||||| |||||||||||||  ||||||  ||||||| ||||||||||||||||||||||||||    
T  26973664 acctgtgaagcccggatacgagatacgatacgaatacgatactgcattgatacgccgatacggaaaaatttcaaaaatcaagatacgata 26973575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 38065316 - 38065232
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||| || ||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  38065316 tgaagtccggatacaaggtacgatacggatacgatactgcaccgatatgccgatacggaaaaatttcaaaaatcaagatacgata 38065232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 39521696 - 39521622
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||    
T  39521696 gatacgagatacgatacggatatgatactgcatcgatacgtcgatacggaaaaatttcaaaaatcaa-atacgata 39521622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 21180430 - 21180355
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||| ||| |||||||| | |||||||||||    
T  21180430 gatacgagatatgatacggatacgatactgcatcgatacgctgatacggaaaactttcaaaatttaagatacgata 21180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 47718678 - 47718748
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    ||||||||||||||| |||||||||||||||||||||||  ||| ||| |||| |||||||||||||||||    
T  47718678 atacgagatacgataaggatacgatactgcaccgatacgccgatgcggaaaaaattcaaaaatcaagatac 47718748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 16563758 - 16563815
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16563758 gatacaatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 16563815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 16601904 - 16601847
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16601904 gatacaatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 16601847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 27397120 - 27397177
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  27397120 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 27397177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 26843574 - 26843630
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgat 359  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  26843574 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgat 26843630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 8029411 - 8029354
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||    
T  8029411 gatacgatactgcactgatacgccgatatgggaaaatttcaaaaatcaagatacgata 8029354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 24956834 - 24956760
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||  |||||||||||||| |||||||  ||||  | |||||||||||||||||||||||||    
T  24956834 gatacgagatacgataca-atacgatactgcactgatacgtcaatacaaggaaatttcaaaaatcaagatacgata 24956760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 34238702 - 34238622
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||| ||||||||||        ||||| ||||||||||||||||||||||||||    
T  34238702 cctgtgaagcccggatacgagatacgatacggatacgacactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 34238622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 48164041 - 48163974
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  48164041 gatacgagatacaatacggatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 48163974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 35160456 - 35160399
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||    
T  35160456 gatatgatactgcatcgatacgtcgatacggaaaaattttaaaaatcaagatacgata 35160399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 11830813 - 11830777
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgata 322  Q
    |||||||||||||||||||||||||||||||||||||    
T  11830813 atacgagatacgatacggatacgatactgcaccgata 11830777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 23078612 - 23078676
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatc 349  Q
    |||||||||||| ||||||||||||||||| |||||||| | ||||||  ||| |||||||||||    
T  23078612 gatacgagatacaatacggatacgatactgtaccgatacatcgatacgaaaaagtttcaaaaatc 23078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 16851425 - 16851386
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  16851425 gatacgagatacgatatggatacgatactgcaccgatacg 16851386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 21409970 - 21409903
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||| ||||||||||||||        |||| || ||||||||||||||||||||||||||    
T  21409970 gatacgagatacgatacgggtacgatactgcacc--------gatatggaaaaatttcaaaaatcaagatacgata 21409903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 36661580 - 36661518
Alignment:
Q  290 gagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||| ||        ||||||| ||||||||||||||||||||||||||    
T  36661580 gagatacgatacggatacgatactgcgcc--------gatacggaaaaatttcaaaaatcaagatacgata 36661518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 11705227 - 11705128
Alignment:
Q  151 gcatagaacggggtctcaagaagacctcatttacaatcttatcatccaacagtcattactgatccccaatgactatataagtgtggcacctctgtcacgc 250  Q
    |||| ||| ||||||||| || || ||||  || ||||||||||| |||| |||||||||| ||  | ||| |||||||||||||||| ||||| |||||    
T  11705227 gcatggaatggggtctcatgacgatctcacctataatcttatcattcaacggtcattactggtcttcgatgtctatataagtgtggcatctctgccacgc 11705128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 27354555 - 27354516
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  27354555 gatacaagatacgatacggatacgatactgcatcgatacg 27354516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 36757513 - 36757564
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||||||  |||||||||||||||| |||||||||| || ||||||||    
T  36757513 cctgtgaagtccggatacgagatacgatatggatacgatattgtaccgatac 36757564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 36767037 - 36767088
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||||||  |||||||||||||||| |||||||||| || ||||||||    
T  36767037 cctgtgaagtccggatacgagatacgatatggatacgatattgtaccgatac 36767088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 29188853 - 29188910
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |||| ||||||  ||||||||||||||| |||| | |||||||||||    
T  29188853 gatacgatacggcactgatacggcgatacgggaaaatttaaaaatttaagatacgata 29188910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 35136601 - 35136544
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| ||||||||||| ||||| || ||| |||||||||| ||||| |||||    
T  35136601 gatacgatacggcaccgatacgctgataaggaaaattttcaaaaattaagatgcgata 35136544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 7e-37; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 274 - 360
Target Start/End: Original strand, 37346330 - 37346416
Alignment:
Q  274 tgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37346330 tgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 37346416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 6915835 - 6915924
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  6915835 acctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 6915924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 36363036 - 36363125
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36363036 acctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 36363125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 38331583 - 38331495
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  38331583 cctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggtaaaatttcaaaaatcaagatacgata 38331495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 3427990 - 3427903
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  3427990 ctgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 3427903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 28948191 - 28948266
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  28948191 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 28948266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 52894688 - 52894763
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  52894688 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 52894763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 8133300 - 8133225
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  8133300 gatacgagatacgatacggatacgatactgcactgatacgtcgatacggtaaaatttcaaaaatcaagatacgata 8133225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 37104771 - 37104696
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  37104771 gatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 37104696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 30324851 - 30324763
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||    
T  30324851 cctgtgaagcccggatacgagatatgatacggatacgatactgcatcgatacgttgatacggaaaaatttcaaaaattaagatacgata 30324763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 10822985 - 10822911
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  10822985 atacgagatacgatacggatacaatactgtaccgatacgttgatacggagaaatttcaaaaatcaagatacgata 10822911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 20409084 - 20409171
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| | | |||||||||||||||| |||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  20409084 ctgtgaagcccatatacgagatacgatacagatacgatactgcaccgatatgccgatacggaaaaatttcaaaaatcaagatacgata 20409171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 25257734 - 25257659
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||||    
T  25257734 gatacgagatatgatacggatacgatactgcaccgatacgccgatatggaaaaatttcaaaaatcaagatacgata 25257659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 13012391 - 13012448
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13012391 gatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 13012448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 29862402 - 29862318
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||||||||||||||| |||||||||||| || ||||||| || |||| ||||||||||||||||||||||||||    
T  29862402 tgaagtccggatacgagatacgatacagatacgatactgtactgatacgtcgaaacggaaaaatttcaaaaatcaagatacgata 29862318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 34431943 - 34432018
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| || ||| ||| ||||||||||||||||||    
T  34431943 gatacgagatatgatacggatacgatactgcaccgatacattgatatggaaaatttttaaaaatcaagatacgata 34432018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 9782236 - 9782162
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| |||||||||||||| |||||| ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  9782236 atacgatatacgatacggatatgatactacactgatacgccgatacgggaaaatttcaaaaatcaagatacgata 9782162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 31652818 - 31652875
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31652818 gatacgatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 31652875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 29168540 - 29168465
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||  ||| |||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  29168540 gatacgagatataatatggatacgatattgcaccgatacgtcgatacaggaaaatttcaaaaattaagatacgata 29168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 32380585 - 32380659
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||| |||||||||  ||||||| ||||||| ||||||||||||||||||||| ||||    
T  32380585 atacgagatacgatacgtatatgatactgcaatgatacgtcgatacggaaaaatttcaaaaatcaagatatgata 32380659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 4027369 - 4027426
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  4027369 gatacgatactgcaccgatacgtcgatacggaaaattttcaaaaatcaagatacgata 4027426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 38218938 - 38218881
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  38218938 gatacgatactgcactgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 38218881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 5985292 - 5985234
Alignment:
Q  303 gatacgatactgcac--cgatacgttgatacgggaaaatttcaaaaatcaagatacgat 359  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5985292 gatacgatactgcacaccgatacgttgatacggaaaaatttcaaaaatcaagatacgat 5985234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 33040971 - 33040896
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| |||||| ||||||| ||||||||||  || ||| |||||||||||||| |||||||||||    
T  33040971 gatacgagatacgatgcggatatgatactgaaccgatacgtctatgcggaaaaatttcaaaaattaagatacgata 33040896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 34096073 - 34096152
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||| ||||||||||||||||||||| ||||| |||| ||     ||||||||||||||||||||||||||||||    
T  34096073 tgaagtccggatacaagatacgatacggatacgatattgcactgatatgt-----cgggaaaatttcaaaaatcaagatacgata 34096152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 2472246 - 2472320
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||||||||  ||| || |||||  |||||||| ||||||||||||||||||    
T  2472246 gatacgagatacgatacggatatgatactgcactaatatgtcgatac-agaaaattttaaaaatcaagatacgata 2472320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 1037100 - 1037062
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1037100 gatacgagatacgatacggatacgatactgcaccgatac 1037062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 323
Target Start/End: Complemental strand, 1044006 - 1043968
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1044006 gatacgagatacgatacggatacgatactgcaccgatac 1043968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 2364968 - 2364894
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||   ||| ||| |||||| |||||||||||    
T  2364968 atacaagatacaatacggatacgatactgcactgatacgttgatacataaaagttttaaaaattaagatacgata 2364894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 43190373 - 43190306
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  43190373 gataggagatatgatacggatacgatactgcaccgatacg--------ggaaaatttcaaaaatcaagatacgata 43190306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 3703829 - 3703886
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||||||||||||||| ||||||  |||||||||||||| |||||||||||    
T  3703829 gatatgatactgcaccgatacgtcgatacgaaaaaatttcaaaaattaagatacgata 3703886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 10764210 - 10764153
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||    
T  10764210 gatacgatactgcactgatacgctgatatgaaaaaatttcaaaaatcaagatacgata 10764153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 28658404 - 28658461
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||| ||| |  ||||||| ||| ||||||||||||||||||||||    
T  28658404 gatacgatactgcacctatatgccgatacggaaaattttcaaaaatcaagatacgata 28658461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 312
Target Start/End: Complemental strand, 38949270 - 38949231
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatac 312  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  38949270 ctgtgaagtccagatacgagatacgatacgggtacgatac 38949231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 14334848 - 14334815
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  14334848 gatacgggagaatttcaaaaatcaagatacgata 14334815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 36551955 - 36551922
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  36551955 gatacggaaaaatttcaaaaatcaagatacgata 36551922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 24852120 - 24852080
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatact 313  Q
    ||||||||||  |||||||||| ||||||||||||||||||    
T  24852120 ctgtgaagtccggatacgagatgcgatacggatacgatact 24852080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 10657593 - 10657504
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10657593 acctgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 10657504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 39689713 - 39689788
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39689713 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 39689788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 25750211 - 25750123
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  25750211 cctgtgaagcccggatacgagatacgatacggatacgatactgcatcgatacgtcgatacaggaaaatttcaaaaatcaagatacgata 25750123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 27938760 - 27938676
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  27938760 tgaagtccggatacgagatacaatacggatacgatactgcaccgatacgtcgatacgggaaaattttaaaaatcaagatacgata 27938676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 1638778 - 1638853
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  1638778 gatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 1638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 30776820 - 30776895
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  30776820 gatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 30776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 30919278 - 30919203
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  30919278 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaaattcaaaaatcaagatacgata 30919203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 32707164 - 32707239
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  32707164 gatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 32707239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 41392220 - 41392307
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| | |||||||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  41392220 ctgtgaagcccagatacgagatacgatacggatacgatactgcactgatacgccgatacggaaaaatttcaaaaatcaagatacgata 41392307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 7629638 - 7629563
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  7629638 gatacgagatacgatacggatataatactgcaccgatacattgacacgggaaaatttcaaaaatcaagatacgata 7629563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 17137694 - 17137780
Alignment:
Q  270 tacctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    |||||||||||||  ||||||||||||||||  |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  17137694 tacctgtgaagtccggatacgagatacgatatagatatgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatac 17137780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 1795986 - 1795910
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||| ||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||    
T  1795986 gatacaagatacgatacggatacgatactgcactgatacgccgataagggaaaatttcaaaaatcaagatacgatat 1795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 9793427 - 9793356
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  9793427 gatacgagatgcgatacggatacgatactgcaccgatatgtcgatacggcaaaatttcaaaaatcaagatac 9793356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 34032953 - 34032883
Alignment:
Q  290 gagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  34032953 gagatacgatatggatacgatactgcatcgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 34032883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 26793965 - 26794052
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || |||| |||||||||||||||||||||||| || ||||||||  |||||| ||||||| ||||||||||||||||||    
T  26793965 ctgtgaagccttgataagagatacgatacggatacgatactacatcgatacgtcaatacggaaaaattttaaaaatcaagatacgata 26794052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 21252077 - 21252001
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    |||||||||||| ||||| ||||||||||||||||||| ||  |||| | |||||||||||||||||||||||||||    
T  21252077 gatacgagatacaatacgtatacgatactgcaccgatatgtcaatacagaaaaatttcaaaaatcaagatacgatat 21252001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 7977781 - 7977707
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||||||||| |||||||||||||||||||||||  ||||  | ||||||||||||||||||||||||||    
T  7977781 atacgtgatacgatatggatacgatactgcaccgatacgccgatagagaaaaatttcaaaaatcaagatacgata 7977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 35745938 - 35745995
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  35745938 gatacggtactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgata 35745995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 42365628 - 42365702
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |||||||||| | ||||||| ||||| || ||||||||| ||||| ||||||||||||||||||    
T  42365628 atacgagatatgatacggatatgttactgcatcgatatgtcgatacgggacaattttaaaaatcaagatacgata 42365702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 14836914 - 14836845
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagata 355  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||  | |||||||||||||||||||||    
T  14836914 atacgagatacgatacggatatgatactgcattgatacgtcgatatagaaaaatttcaaaaatcaagata 14836845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 18001476 - 18001529
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  18001476 acctgtgaagcccggatacgagatacgatacggatacgatactgcaccgatacg 18001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 43357304 - 43357361
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||    
T  43357304 gatacgatactgcactgatacgtcgatatgggaaaattacaaaaatcaagatacgata 43357361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 26716867 - 26716792
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| |||||||||||  |||  ||||||||||||||||| |||||| ||||||||||||||| || ||||||||    
T  26716867 gatacaagatacgatacatatataatactgcaccgatacgtcgatacgagaaaatttcaaaaattaatatacgata 26716792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 26986607 - 26986532
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| |||||||||||  |||  ||||||||||||||||| |||||| ||||||||||||||| || ||||||||    
T  26986607 gatacaagatacgatacatatataatactgcaccgatacgtcgatacgagaaaatttcaaaaattaatatacgata 26986532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 33830716 - 33830649
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  33830716 gatacgagatacgatacagatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 33830649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 5985480 - 5985537
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  5985480 gatacgatactacactgatacgccgatacgggaaaattttaaaaatcaagatacgata 5985537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 11907893 - 11907836
Alignment:
Q  291 agatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaat 348  Q
    |||||||||| |||||||||||||||  ||||||| ||||||| ||||||||||||||    
T  11907893 agatacgatatggatacgatactgcattgatacgtcgatacggaaaaatttcaaaaat 11907836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 1921357 - 1921298
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaa--tttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||| ||||||| ||||  ||||||||||||||||||||||    
T  1921357 gatacgatactacaccgatacgtcgatacggaaaaaaatttcaaaaatcaagatacgata 1921298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 22738446 - 22738370
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttga-tacgggaaaatttcaaaaatcaagatacgat 359  Q
    ||||||||||||  |||| |||||||||||||| |||||||  || ||||  |||||||||||||||||||||||||    
T  22738446 agatacgagatataatacagatacgatactgcaacgatacgccgaatacgaaaaaatttcaaaaatcaagatacgat 22738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 355
Target Start/End: Complemental strand, 21317788 - 21317725
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagata 355  Q
    ||||||||||||||| ||||| |||||||||||| | ||||||||||||| |||| | ||||||    
T  21317788 gatacgatacggatatgatacggcaccgatacgtcgctacgggaaaattttaaaatttaagata 21317725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 12190994 - 12190937
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| |||| ||| |||||||||||||||| ||||||| |||| |||||||||||||    
T  12190994 gatacaatacggcatcgatacgttgatacggaaaaattttaaaattcaagatacgata 12190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 30284121 - 30284178
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||| | ||||  | ||||||||||||||||||    
T  30284121 gatacgatactgcaccgatacgtcgatacagaaaaaaattaaaaatcaagatacgata 30284178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 3701671 - 3701604
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| |||||||||||||||||||||||||||        ||||| || |||||||||||| |||||||||||||    
T  3701671 gatacaagatacgatacggatacgatactgcac--------tgatatggaaaaatttcaaaactcaagatacgata 3701604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 41233868 - 41233834
Alignment:
Q  326 tgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| ||||||||||||||||||||||||||    
T  41233868 tgatacggaaaaatttcaaaaatcaagatacgata 41233834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 41233905 - 41233867
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactg 314  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  41233905 tgaagtctggatacgagaaacgatacggatacgatactg 41233867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 5722594 - 5722537
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||| || ||||||  |   ||||||||||||||||||||||    
T  5722594 gatacgatactgcaccgatatgtcgatacgaaattttttcaaaaatcaagatacgata 5722537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 32625368 - 32625335
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  32625368 gatacggaaaaatttcaaaaatcaagatacgata 32625335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 39796511 - 39796544
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  39796511 gatacggaaaaatttcaaaaatcaagatacgata 39796544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 6272 - 6186
Alignment:
Q  274 tgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6272 tgtgaagcctggatacgagatacgatacggatatgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 6186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 1678654 - 1678743
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1678654 acctgtgaagtccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggtaaaatttcaaaaatcaagatacgata 1678743  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 28882053 - 28882140
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28882053 ctgtgaagcctggatacgagatacgatacagatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatgaagatacgata 28882140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 37996286 - 37996362
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  37996286 gatacgagatacgatacggatacgatactgcaccgatacgttgatatggaaaaatttcaaaaatcaagatacgatat 37996362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 1529154 - 1529079
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1529154 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 1529079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 7328347 - 7328272
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  7328347 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 7328272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 39665022 - 39664935
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||  |||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  39665022 ctgtgaagtccggatacgagatacgatacggatacgatactgtactgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 39664935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 40499517 - 40499442
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40499517 gatacgagatacgatacggatacgatactgcaccgatatgttgatacggaaaaatttcaaaaatcaagatacgata 40499442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 42230501 - 42230414
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  42230501 ctgtgaagcctggatacgagatatgatacggatacgatactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgata 42230414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 28705884 - 28705795
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||    
T  28705884 acctgtgaagtccggatacgagatacgatacggatacgatactgcaccgatacgtcgatgcggcaaaatttcaaaaatcaagatatgata 28705795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 22289212 - 22289296
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22289212 tgaagtcctgatacgagatatgatacagatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgata 22289296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 52685036 - 52684961
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  52685036 gatacaagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 52684961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 25936063 - 25936138
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  25936063 gatacgagatacgatacagatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 25936138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 35390478 - 35390403
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||||    
T  35390478 gatacgagatacgatacggatatgatactgcaccgatacgttgatatgggaaaattttaaaaattaagatacgata 35390403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 22311463 - 22311387
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||    
T  22311463 gatacaagatatgatacggatacgatactgtaccgatacgttgatatgagaaaatttcaaaaatcaagatacgatat 22311387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 22610261 - 22610337
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| | ||| ||||||||||||||||||||||    
T  22610261 agatacgagatacgatacggatacgatactgcaccgatacgccgatacagaaaattttcaaaaatcaagatacgata 22610337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 33241449 - 33241392
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33241449 gatacgatactgcaccgatacgttaatacgggaaaatttcaaaaatcaagatacgata 33241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 10224123 - 10224210
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || |||| |||||||||||||||||||||||| || ||||||||  |||||| ||||||| ||||||||||||||||||    
T  10224123 ctgtgaagccttgataagagatacgatacggatacgatactacatcgatacgtcaatacggaaaaattttaaaaatcaagatacgata 10224210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 21005772 - 21005847
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| |  ||||||||||||||||||||| ||||    
T  21005772 gatacgagatacgatacggatatgatactgcaccgatacgtcgatatgaaaaaatttcaaaaatcaagataggata 21005847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 13748024 - 13748098
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgat 359  Q
    |||||||||||||||||||||| ||||||| || || |||| ||||||||||||||| |||||||||||||||||    
T  13748024 gatacgagatacgatacggataagatactgtactgaaacgtcgatacgggaaaattttaaaaatcaagatacgat 13748098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 19422027 - 19421953
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgat 359  Q
    ||||||||||| |||||| |||||||||||||| ||||||| |||| || |||||||||||||||||||||||||    
T  19422027 gatacgagatatgatacgaatacgatactgcactgatacgtcgatatggaaaaatttcaaaaatcaagatacgat 19421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 29916366 - 29916309
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  29916366 gatacgatactgcaccgatacgatgatatgggaaaatttcaaaaatcaagatacgata 29916309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 29965519 - 29965462
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  29965519 gatacgatactgcaccgatacgatgatatgggaaaatttcaaaaatcaagatacgata 29965462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 2123311 - 2123258
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  2123311 acctgtgaagcctagatacgagatacgatacggatacgatactgtaccgatacg 2123258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 52501262 - 52501319
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  52501262 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 52501319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 19877744 - 19877820
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||||||||||||||||||| |||||| | |||||   |||||||| |||||||||||||| ||||||||||||    
T  19877744 gatacgagatacgatacggatacaatactgtatcgatagactgatacggaaaaatttcaaaaattaagatacgatat 19877820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 41741675 - 41741746
Alignment:
Q  289 cgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||| |||| |||||||||  ||||||| |||||| |||||||||||||||||| ||||||||    
T  41741675 cgagatacgatacagatatgatactgcattgatacgtcgatacgagaaaatttcaaaaatcaatatacgata 41741746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 357
Target Start/End: Complemental strand, 7754712 - 7754626
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacg 357  Q
    |||| ||||| | ||||||  ||||| ||||||||| ||||| |||||||||||| ||||||||||||||| |||| ||||||||||    
T  7754712 acctatgaagcccagatacatgatacaatacggatatgatacggcaccgatacgtcgatacgggaaaattttaaaattcaagatacg 7754626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 13352746 - 13352800
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacg 357  Q
    ||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  13352746 gatacgatactgcacagatacgttgatatggaaaaatttcaaaaatcaagatacg 13352800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 45348149 - 45348092
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||| || ||||||| ||||||||||||||||||||||||| ||||||||    
T  45348149 gatacgatactgtactgatacgtcgatacgggaaaatttcaaaaatcaaaatacgata 45348092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 45532064 - 45532121
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||    
T  45532064 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaataaagatacgata 45532121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 52121888 - 52121821
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||| ||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  52121888 gatacgagatacggtacggatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 52121821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 48333516 - 48333459
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||    
T  48333516 gatacgatactgcaccgatacgtcgatgcggataaatttcaaaaatcaagatatgata 48333459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 48334461 - 48334404
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||| |||||||||| ||||| |  |||||||||||||||||||||||||    
T  48334461 gatacgatactgtaccgatacgtcgatacagataaatttcaaaaatcaagatacgata 48334404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 8352027 - 8352090
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagata 355  Q
    ||||||| |||||||||||||   ||||||||| ||||||| ||||||||||||| ||||||||    
T  8352027 gatacgacacggatacgatacgataccgatacgatgatacgtgaaaatttcaaaattcaagata 8352090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 19349142 - 19349199
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||| |||| || || |||| ||||||||||||||||||||||||||    
T  19349142 gatacgatactacactgatatgtcgacacggtaaaatttcaaaaatcaagatacgata 19349199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 45056822 - 45056879
Alignment:
Q  304 atacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||| ||||||||  |||||| ||||| | |||||||||||||||||||||||||||    
T  45056822 atacgttactgcactaatacgtcgatacagaaaaatttcaaaaatcaagatacgatat 45056879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 360
Target Start/End: Original strand, 50286762 - 50286807
Alignment:
Q  315 caccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||    
T  50286762 caccaatacgttgatacgggaaaaattcaaaaattaagatacgata 50286807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 53193011 - 53192954
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||| ||  ||||||  |||| |||||||||||||||||||||    
T  53193011 gatacgatactgcaccgattcgccgatacgaaaaaaattcaaaaatcaagatacgata 53192954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 213109 - 213034
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| ||||||||||||  ||| ||||||||| |  ||||| ||||||| ||||||||||||||||| ||| ||||    
T  213109 gatatgagatacgatacaaatatgatactgcatcagtacgtcgatacggaaaaatttcaaaaatcaatatatgata 213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 13803388 - 13803430
Alignment:
Q  318 cgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||    
T  13803388 cgatacgctgatacgggaaaatttcaaaattcaagaaacgata 13803430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 30786246 - 30786320
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||| ||||||| ||||| || ||||| || | ||||| |||| || | ||||||||||||||||    
T  30786246 atacgagatacgattcggatactatactacaacgatatgtcggtacggaaaaaatttataaatcaagatacgata 30786320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 7899266 - 7899299
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  7899266 gatacggaaaaatttcaaaaatcaagatacgata 7899299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 28969082 - 28969049
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  28969082 gatacggaaaaatttcaaaaatcaagatacgata 28969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 42464165 - 42464198
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  42464165 gatacggaaaaatttcaaaaatcaagatacgata 42464198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 28548587 - 28548555
Alignment:
Q  335 aaaatttcaaaaatcaagatacgatattgttgg 367  Q
    ||||||||||||||||||||||||||| |||||    
T  28548587 aaaatttcaaaaatcaagatacgatatggttgg 28548555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 32878201 - 32878114
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  32878201 ctgtgaagcctggatacgagatacgatacggatacgatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgata 32878114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 6029202 - 6029118
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  6029202 tgaagtctggatacgagatacgatacggatacgatactgcaccgatacgtcgatacagaaaaatttcaaaaatcaagatacgata 6029118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 34900356 - 34900431
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  34900356 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 34900431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 4247058 - 4246982
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  4247058 gatacgagatacgatacagatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatat 4246982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 22200805 - 22200880
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  22200805 gatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 22200880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 16385183 - 16385094
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  16385183 acctgtgaagcccggatacgagatatgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 16385094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 36484558 - 36484482
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||    
T  36484558 agatacgagatacgatacggatacgatactgcactgatacgtcgatacggaaaattttcaaaaatcaagatacgata 36484482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 28875550 - 28875625
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||    
T  28875550 gatacgagatacgatacggatacgatactgcatcgatacgccgatacggaaaaatttcaaaaatcaagatacgata 28875625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 25022867 - 25022810
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25022867 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 25022810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 297 - 360
Target Start/End: Original strand, 2871500 - 2871563
Alignment:
Q  297 gatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  2871500 gatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 2871563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 37372838 - 37372764
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||    
T  37372838 atacgagatacaatacggatacgatactgcatcaatatgttgatacaggaaaatttcaaaaatcaagatacgata 37372764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 19436967 - 19436910
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19436967 gatacgatactgcaccgatacattgatacgggaaaatttcaaaaatcaagatacgata 19436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 19573116 - 19573059
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19573116 gatacgatactgcaccgatacattgatacgggaaaatttcaaaaatcaagatacgata 19573059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 19947380 - 19947437
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19947380 gatacgatactgcaccgatacgttgatacgtgaaaatttcaaaaatcaagatacgata 19947437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 13422752 - 13422677
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| || ||| ||| ||||||||||||||||||    
T  13422752 gatacgagatacgatacggatacgatactgcaccgatacgccgatatggaaaatttttaaaaatcaagatacgata 13422677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 45216207 - 45216275
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaaga 353  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||||    
T  45216207 gatacgagatacgatacggatacgatactgcactgatacgtcgatatagaaaaatttcaaaaatcaaga 45216275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 37669683 - 37669626
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  37669683 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 37669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 43770706 - 43770763
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  43770706 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 43770763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 3892551 - 3892479
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacg 357  Q
    ||||||||||  |||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||||||||    
T  3892551 gatacgagatttgatacgaatacgatattgcaccgatatgttgatacggaaaaatttcaaaaattaagatacg 3892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 5540559 - 5540479
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  5540559 cctgtgaagcccggatacgagatacgatacggatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 5540479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 32425496 - 32425421
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| |||||||||||||||| ||||||||||| |||    ||||||| ||||||||||||||||||||||||||    
T  32425496 gatacaagatacgatacggatatgatactgcaccaatataccgatacggaaaaatttcaaaaatcaagatacgata 32425421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 33192 - 33123
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    |||||| ||||||||||||||||| | ||||||  ||||||||||||||||||||||||| ||| |||||    
T  33192 gatacgctacggatacgatactgctctgatacgacgatacgggaaaatttcaaaaatcaaaatatgatat 33123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 5817867 - 5817933
Alignment:
Q  286 atacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||| ||||||||||        ||||||||||||||||||||||||||||||||||    
T  5817867 atacgagatacgatacggatacaatactgcacc--------gatacgggaaaatttcaaaaatcaagatacgata 5817933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 32638199 - 32638274
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| |||||| ||| |||||  |||||||||   ||||||| ||||||||||||||||||||||||||    
T  32638199 gatacgagataagatacgaatatgatacaacaccgatacaccgatacggaaaaatttcaaaaatcaagatacgata 32638274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 12579522 - 12579589
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||||||        ||||||| ||||||||||||||||||||||||||    
T  12579522 gatacgagatacgatacggatacaatactgcacc--------gatacggaaaaatttcaaaaatcaagatacgata 12579589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 32760481 - 32760441
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  32760481 agatacgagatacgatacggatacgatactgcatcgatacg 32760441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 17702982 - 17702914
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| ||||||||||  ||| ||||||| |||| | |||||||| |||| |||||||||||||    
T  17702982 gatacgatacagatacgatacaacactgatacgtcgatatgagaaaattttaaaattcaagatacgata 17702914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 7413043 - 7412948
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatattgttg 366  Q
    |||| |||||||  |||| || |||||||  ||||||||||||||| | |||| | ||||||| |||| ||||||||| ||||||| ||| |||||    
T  7413043 acctatgaagtccggatatgacatacgatgtggatacgatactgcatcaatacttcgatacggaaaaaattcaaaaattaagatacaatactgttg 7412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 38389250 - 38389211
Alignment:
Q  318 cgatacgttgatacgggaaaatttcaaaaatcaagatacg 357  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  38389250 cgatacgttgatatggaaaaatttcaaaaatcaagatacg 38389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 8170512 - 8170562
Alignment:
Q  274 tgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||  |||| ||||||| ||||||||||||||||||| |||||||    
T  8170512 tgtgaagtccggataggagatacaatacggatacgatactgcatcgatacg 8170562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 30804254 - 30804311
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| | ||||||||| ||||| ||||||| || |||| |||||||||||||    
T  30804254 gatacgatacggtaccgatacgctgatatgggaaaactttaaaattcaagatacgata 30804311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 41098489 - 41098521
Alignment:
Q  328 atacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| ||||||||||||||||||||||||||    
T  41098489 atacggaaaaatttcaaaaatcaagatacgata 41098521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 234919 - 234833
Alignment:
Q  274 tgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  234919 tgtgaagcctggatacgagatacgatacggatacgatactgcattgatacgttgatacgggaaaatttcaaaaatcaagatacgata 234833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 1035801 - 1035876
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1035801 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgata 1035876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 19128747 - 19128672
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||    
T  19128747 gatacgagatacgatacggatacgatactacactgatacgttgatacgtgaaaatttcaaaaatcaagataagata 19128672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 31186939 - 31187014
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  31186939 gatatgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 31187014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 32018800 - 32018713
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| || |||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||| ||||||||    
T  32018800 ctgtgaaatccagatacgagatacgatacggatacgataatgcaccaatacgtagatacggaaaaatttcaaaaatcaaaatacgata 32018713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 31738141 - 31738228
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || |||||||||||| ||||| ||||||||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  31738141 ctgtgaagcctggatacgagatacaatacgaatacgatactgcaccgatacaccgatacgtgaaaatttcaaaaatcaagatacgata 31738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 13607299 - 13607356
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  13607299 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 13607356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 3213259 - 3213202
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  3213259 gatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 3213202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 32130062 - 32130119
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  32130062 gatacgatactacaccgatacgttgatatcggaaaatttcaaaaatcaagatacgata 32130119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 4153065 - 4153140
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgat 359  Q
    |||||||||||||||||| | |||||||||||||||||||  |||||| | ||| |||||||||| ||||||||||    
T  4153065 agatacgagatacgatacaggtacgatactgcaccgatacactgatacagaaaattttcaaaaattaagatacgat 4153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 7187772 - 7187811
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7187772 gatacgagatacgatacggatacgatactgcaccgatacg 7187811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 6707503 - 6707556
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||||||||||    
T  6707503 acctgtgaagcccggatacgagatacgatacggatacgatattgcaccgatacg 6707556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 7255520 - 7255457
Alignment:
Q  297 gatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| ||||||||||||||||||||||  |||| | |||||||||||||| || ||||||||    
T  7255520 gatacgaatacgatactgcaccgatacgtctatacagaaaaatttcaaaaattaaaatacgata 7255457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 10893749 - 10893782
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||    
T  10893749 gatacgggaaaatttcaaaaatcaagatacgata 10893782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 13060896 - 13060949
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    |||| |||||||||||||||||| |||| || |||||||| |||||||||||||    
T  13060896 gatatgatactgcaccgatacgtcgatatggaaaaatttcgaaaatcaagatac 13060949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 3300023 - 3299968
Alignment:
Q  305 tacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| || |||||||||||| || ||||||| |||||| |||||||||||    
T  3300023 tacgatactgtactgatacgttgatatggaaaaattttaaaaattaagatacgata 3299968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 8357994 - 8357939
Alignment:
Q  297 gatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||        | ||||||||||||||||||||||||||    
T  8357994 gatacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgata 8357939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 13044903 - 13044960
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| |||||||||||||||||| |||| |  ||| |||| |||||||||||||||||    
T  13044903 gatatgatactgcaccgatacgtcgatatgaaaaattttcgaaaatcaagatacgata 13044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 26327894 - 26327861
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  26327894 gatacggaaaaatttcaaaaatcaagatacgata 26327861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 5371705 - 5371619
Alignment:
Q  274 tgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5371705 tgtgaagtctggatatgagatacgatacggatacgatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgata 5371619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 28746170 - 28746259
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  28746170 acctgtgaagcccggatacgagatacgatacggatacgatactgcactgatacgccgatacgggaaaatttcaaaaatcaagatacgata 28746259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 6496648 - 6496732
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  6496648 tgaagtccatatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 6496732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 10574107 - 10574019
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  10574107 cctgtgaagcccggatacgagatacgatacggatatgatactgcaccgatacgctgatacgggaaaatttcaaaaatcaagatatgata 10574019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 12819930 - 12819863
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12819930 gatacgatacggatacg-tactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 12819863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 7877256 - 7877181
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  7877256 gatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 7877181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 14216760 - 14216835
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||| ||||||||| |  ||||| |||||||||||||||||||||||||||    
T  14216760 gatacgagatacgatacggatacgatactacaccgatacatcaatacgagaaaatttcaaaaatcaagatacgata 14216835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 3564418 - 3564361
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3564418 gatacgatactgcaccgatacgttgatacgagaaaatttcaaaaatcaagatacgata 3564361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 4562396 - 4562307
Alignment:
Q  271 acctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| |  ||||| ||||| ||||||||||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||    
T  4562396 acctgtgaagcccggatacaagatatgatacggatacgatactacaccgatacgtcgatatggaaaaatttcaaaaatcaagatacgata 4562307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 40431532 - 40431616
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  |||||||||||| |||||||||  ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  40431532 tgaagtccggatacgagatacaatacggatataatactgcaccgatacgtcgatacggaaaaattttaaaaatcaagatacgata 40431616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 12206759 - 12206688
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  12206759 gatacaagatatgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaattaagatac 12206688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 4169523 - 4169580
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  4169523 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 4169580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 18301661 - 18301604
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18301661 gatacgatactgcaccgatatgtcgatacgggaaaatttcaaaaatcaagatacgata 18301604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 8482429 - 8482513
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| || |||| ||||||||||| |||||||||| | |||||||| || ||||||||||||||||||||||||||||| ||||    
T  8482429 tgaagcctggataagagatacgatatggatacgatattacaccgatatgtcgatacgggaaaatttcaaaaatcaagataggata 8482513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 37354492 - 37354559
Alignment:
Q  293 atacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||    
T  37354492 atacgaaatggatacgatactgcaccgatacgttgatacgggaaaactttaaaattcaagatacgata 37354559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 273 - 360
Target Start/End: Complemental strand, 6125308 - 6125229
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||    
T  6125308 ctgtgaagcctggatacgagatacgatacggatacgatactgcaccga--------tacggaaaaatttcaaaaatcaagatacgata 6125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 34146789 - 34146720
Alignment:
Q  284 agatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||    
T  34146789 agatacgagatacgatacggatacgatactgcaccgata-------acggaaaaatttcaaaaatcaagatacgata 34146720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 1006087 - 1006039
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaa 351  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1006087 gatacgatactgcaccgatacgttgatacgtgaaaatttcaaaaatcaa 1006039  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 3545090 - 3545161
Alignment:
Q  289 cgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||| ||| |||||||    |||||||||||| |||||||||||||    
T  3545090 cgagatacgatacggatacgatactgcaccaatatgttgatataaaaaaatttcaaaactcaagatacgata 3545161  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 7806839 - 7806919
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  |||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  7806839 cctgtgaagcccggatacgagatacgatacgaatacgatactgcacc--------gatacgggaaaatttcaaaaatcaagatacgata 7806919  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 16562333 - 16562275
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||    
T  16562333 gatacgatactgcaccgatacgccaatacggaaaaatttcaaaaatcaagatacgatat 16562275  T

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Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 20537442 - 20537384
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||    
T  20537442 gatacgatactgcactgatacgccgatacgggaaaatttcaaaaatcaaaatacgatat 20537384  T

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Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 22571523 - 22571466
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  22571523 gatacgatactgcactgatacgccgatacggaaaaatttcaaaaatcaagatacgata 22571466  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 5588644 - 5588560
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  |||| |||||||||||| ||||||||||||||||||||  || |||  |||||||||| |||||||||||| ||||    
T  5588644 tgaagtccggatatgagatacgatacagatacgatactgcaccgatatattaatattggaaaatttccaaaatcaagatatgata 5588560  T

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Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 24586110 - 24586046
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatattgttgg 367  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||| |||||||||| ||||||    
T  24586110 gatatgatactgcaccgatatgctgatacggaaaaatttcaaaaatcgagatacgatactgttgg 24586046  T

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Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 33737437 - 33737501
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatac 356  Q
    ||||||| |||||||||||||  ||||||||||| ||||||||||||||| |||| |||||||||    
T  33737437 gatacgacacggatacgatacgccaccgatacgtcgatacgggaaaattttaaaattcaagatac 33737501  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 40536818 - 40536734
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||| ||||||||||| ||| |||||| |||| ||||||  ||||||  ||||||||||||||||||||||||||    
T  40536818 tgaagtccggatacaagatacgatacagattcgatacggcactgatacgccgatacgaaaaaatttcaaaaatcaagatacgata 40536734  T

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Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 35342946 - 35342856
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcacc------gatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||  ||||||||||||||||| |||| |||||||||||      ||||||  ||||||| ||||||||||||||||||||||||||    
T  35342946 tgaagtccggatacgagatacgatacagatatgatactgcacctgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgata 35342856  T

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Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 35997123 - 35997048
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||||  |||| |||  ||||||||| |||||||    
T  35997123 gatatgagatacgaaacggatacgatactgcaccgatacgtcgatacaagaaattttttaaaatcaaggtacgata 35997048  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 44157165 - 44157114
Alignment:
Q  309 atactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  44157165 atactgcaccgatacgtcgatacagaaaaatttcaaaaatcaagatacgata 44157114  T

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Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 4356453 - 4356414
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacg 324  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  4356453 gatacgagatacgatacggatacgatactgcatcgatacg 4356414  T

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Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 22485394 - 22485327
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||| ||||||||||||||||||||||        ||||||||  |||||||||||||||||||||||||    
T  22485394 gatacgagatgcgatacggatacgatactgcac--------tgatacggagaaatttcaaaaatcaagatacgata 22485327  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 2319870 - 2319813
Alignment:
Q  303 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||  ||||||| ||||||  ||||||||||||||||||||| ||||    
T  2319870 gatacgatactgcattgatacgtcgatacgaaaaaatttcaaaaatcaagatatgata 2319813  T

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Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 361
Target Start/End: Original strand, 45157074 - 45157143
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatat 361  Q
    ||||||| |||||||||||||  |||||||| |   |||||||||| |||||||| ||||||||||||||    
T  45157074 gatacgacacggatacgatacgacaccgatatgccaatacgggaaattttcaaaattcaagatacgatat 45157143  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 43215182 - 43215116
Alignment:
Q  302 ggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatattgttgga 368  Q
    |||||| ||||  ||| |||||||||||| |||||||||| |||| | |||||||||||| ||||||    
T  43215182 ggatacaatacaacactgatacgttgatatgggaaaattttaaaatttaagatacgatatggttgga 43215116  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 40307864 - 40307897
Alignment:
Q  327 gatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||| ||||||||||||||||||||||||||    
T  40307864 gatacggaaaaatttcaaaaatcaagatacgata 40307897  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 353
Target Start/End: Original strand, 13995259 - 13995287
Alignment:
Q  325 ttgatacgggaaaatttcaaaaatcaaga 353  Q
    |||||||||||||||||||||||||||||    
T  13995259 ttgatacgggaaaatttcaaaaatcaaga 13995287  T

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Target: scaffold0177 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 24882 - 24957
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  24882 gatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgata 24957  T

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Target: scaffold0836 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 4978 - 5046
Alignment:
Q  292 gatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| ||||||||||||||| |||||||| ||||| ||||||||| |||| |||||||||||||    
T  4978 gatacgatagggatacgatactgcatcgatacgtcgatacaggaaaattttaaaattcaagatacgata 5046  T

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Target: scaffold0640 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 360
Target Start/End: Original strand, 7416 - 7496
Alignment:
Q  272 cctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||    
T  7416 cctgtgaagcccggatacgagatacgatacggatacgatactgcacc--------gatacggaaaaatttcaaaaatcaagatacgata 7496  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 43585 - 43635
Alignment:
Q  273 ctgtgaagtctagatacgagatacgatacggatacgatactgcaccgatac 323  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  43585 ctgtgaagcccagatacgagatacgatacggatacgatactgcaccgatac 43635  T

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Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 29637 - 29704
Alignment:
Q  285 gatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||||||||||||||||||||||||||| |||        ||||||| ||||||||||||||||||||||||||    
T  29637 gatacgagatacgatacggatacgatactgtacc--------gatacggaaaaatttcaaaaatcaagatacgata 29704  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 360
Target Start/End: Complemental strand, 11222 - 11138
Alignment:
Q  276 tgaagtctagatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgata 360  Q
    ||||| ||||||||  |||| ||||| |||||||||| |||| |||| |  |||| |||||||||| |||| |||||||||||||    
T  11222 tgaagcctagatacatgatatgatactgatacgatacggcactgatatgccgataagggaaaattttaaaattcaagatacgata 11138  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 13969 - 13937
Alignment:
Q  328 atacgggaaaatttcaaaaatcaagatacgata 360  Q
    |||||| ||||||||||||||||||||||||||    
T  13969 atacggaaaaatttcaaaaatcaagatacgata 13937  T

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