View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1150_low_57 (Length: 307)
Name: NF1150_low_57
Description: NF1150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1150_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 53038350 - 53038206
Alignment:
| Q |
102 |
tctgggacttcgacaaatgttcatgtatttcattccaactcttattagaagaggtggtaccagtccacaaaatgagcattttggttaagactcaaaatgg |
201 |
Q |
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| T |
53038350 |
tctgggacttcgacaaatgttcatgtatttgattccaactcttattagaagaggtggtaccagtccacaaaatgagcattttggttaagactcaaaatgg |
53038251 |
T |
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| Q |
202 |
ccgtttacnnnnnnnagacatgggtgataacattgaaaaccgatc |
246 |
Q |
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| T |
53038250 |
ttgtttactttttttagacatgggtgataacattgaaaaccgatc |
53038206 |
T |
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