View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1150_low_76 (Length: 227)
Name: NF1150_low_76
Description: NF1150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1150_low_76 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 199665 - 199445
Alignment:
| Q |
7 |
ccaccccctcccccaaatccttacgctccaccaccagttgtccaccaccatcatacaccacttcatgctcatcctgctccaccgccaccacagcctggtc |
106 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
199665 |
ccaccccctcctccaaatccttacgctccaccaccagttgtccaccaccatcatacaccacttcatgctcatcctgctccaccgccaccacagcctggtc |
199566 |
T |
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| Q |
107 |
atcccggtcctccaccgccacgtcctccgtattattaagtaattttcttcctatttactatatattaattatgattatctactatcataagttgatcctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
199565 |
atcccggtcctccaccgccacgtcctccgtattattaagtaattttcttcctatttactatatattaattatgattatctactaccataagttgatcctt |
199466 |
T |
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| Q |
207 |
ccatatatgtattaatcatta |
227 |
Q |
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||||||||||||||||||||| |
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| T |
199465 |
ccatatatgtattaatcatta |
199445 |
T |
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