View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11512_low_3 (Length: 673)

Name: NF11512_low_3
Description: NF11512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11512_low_3
NF11512_low_3
[»] chr4 (44 HSPs)
chr4 (1-104)||(6406374-6406477)
chr4 (1-97)||(17985425-17985521)
chr4 (1-97)||(18106067-18106163)
chr4 (1-97)||(40921105-40921201)
chr4 (1-97)||(52498543-52498639)
chr4 (1-97)||(9836599-9836695)
chr4 (1-97)||(16252825-16252921)
chr4 (1-104)||(11476501-11476604)
chr4 (1-88)||(44888154-44888241)
chr4 (1-88)||(2828958-2829046)
chr4 (1-104)||(7847323-7847426)
chr4 (1-88)||(16472057-16472144)
chr4 (2-97)||(17160652-17160747)
chr4 (1-97)||(15668600-15668696)
chr4 (1-97)||(26330638-26330734)
chr4 (5-104)||(4417117-4417216)
chr4 (1-88)||(3488494-3488582)
chr4 (1-88)||(5294002-5294090)
chr4 (1-88)||(5303616-5303704)
chr4 (1-88)||(16248464-16248552)
chr4 (1-88)||(21845373-21845461)
chr4 (1-88)||(21854802-21854890)
chr4 (1-88)||(21901236-21901324)
chr4 (1-88)||(21910665-21910753)
chr4 (1-88)||(27681664-27681752)
chr4 (1-88)||(27691275-27691363)
chr4 (1-90)||(1292765-1292854)
chr4 (1-88)||(16628918-16629007)
chr4 (1-88)||(3497761-3497849)
chr4 (1-88)||(3606607-3606695)
chr4 (1-88)||(6691395-6691483)
chr4 (1-88)||(6701801-6701889)
chr4 (1-88)||(17829141-17829229)
chr4 (1-88)||(17838532-17838620)
chr4 (2-87)||(522795-522880)
chr4 (2-87)||(26457754-26457839)
chr4 (1-88)||(12865745-12865833)
chr4 (1-97)||(13403575-13403671)
chr4 (2-87)||(17421899-17421983)
chr4 (20-88)||(16211756-16211824)
chr4 (267-382)||(10234505-10234618)
chr4 (4-46)||(14601305-14601347)
chr4 (22-88)||(53946871-53946937)
chr4 (279-391)||(22761418-22761530)
[»] chr1 (39 HSPs)
chr1 (1-104)||(1186963-1187066)
chr1 (1-97)||(2115413-2115509)
chr1 (1-97)||(41544674-41544770)
chr1 (1-97)||(42033604-42033700)
chr1 (1-104)||(22960292-22960394)
chr1 (4-104)||(21822006-21822105)
chr1 (1-97)||(21457949-21458045)
chr1 (1-97)||(22406820-22406916)
chr1 (1-104)||(21782108-21782210)
chr1 (1-97)||(8539663-8539759)
chr1 (1-97)||(8604902-8604998)
chr1 (1-97)||(16154295-16154391)
chr1 (2-104)||(34822436-34822542)
chr1 (1-97)||(2370959-2371055)
chr1 (1-97)||(25018881-25018976)
chr1 (5-88)||(18097507-18097590)
chr1 (2-97)||(21885727-21885822)
chr1 (1-97)||(30550157-30550253)
chr1 (2-97)||(13964310-13964405)
chr1 (6-93)||(18382780-18382867)
chr1 (1-91)||(20311699-20311790)
chr1 (1-88)||(37011424-37011511)
chr1 (1-97)||(1968757-1968846)
chr1 (2-91)||(20308221-20308311)
chr1 (2-87)||(1975282-1975367)
chr1 (2-87)||(41207915-41208000)
chr1 (1-88)||(25867665-25867753)
chr1 (1-88)||(26194013-26194101)
chr1 (1-88)||(27065486-27065574)
chr1 (2-87)||(1982648-1982733)
chr1 (2-87)||(1990066-1990151)
chr1 (1-88)||(12418249-12418337)
chr1 (5-88)||(20328953-20329037)
chr1 (15-97)||(25824005-25824087)
chr1 (20-104)||(18062769-18062853)
chr1 (176-388)||(18624752-18624964)
chr1 (22-88)||(49332764-49332830)
chr1 (5-88)||(30209600-30209683)
chr1 (2-31)||(4950434-4950463)
[»] chr6 (35 HSPs)
chr6 (1-97)||(27788119-27788215)
chr6 (1-97)||(24922553-24922649)
chr6 (1-97)||(24931589-24931685)
chr6 (1-97)||(12454374-12454470)
chr6 (1-97)||(18159139-18159235)
chr6 (1-97)||(26425966-26426062)
chr6 (1-94)||(20911713-20911806)
chr6 (2-95)||(20926162-20926255)
chr6 (1-97)||(3285258-3285354)
chr6 (1-97)||(29539870-29539966)
chr6 (1-94)||(23777881-23777974)
chr6 (1-97)||(14791015-14791111)
chr6 (1-97)||(31356881-31356977)
chr6 (1-97)||(31366609-31366705)
chr6 (1-97)||(18200684-18200780)
chr6 (1-88)||(30658721-30658808)
chr6 (1-88)||(1595842-1595930)
chr6 (1-88)||(12991134-12991222)
chr6 (1-88)||(16907739-16907827)
chr6 (1-88)||(17823497-17823585)
chr6 (2-88)||(16897087-16897174)
chr6 (1-97)||(18168957-18169047)
chr6 (2-87)||(24692245-24692330)
chr6 (1-88)||(26021762-26021850)
chr6 (1-82)||(7756021-7756103)
chr6 (2-72)||(24370892-24370962)
chr6 (2-87)||(8563801-8563886)
chr6 (1-105)||(18712750-18712854)
chr6 (2-87)||(34764735-34764820)
chr6 (1-88)||(24505986-24506074)
chr6 (5-88)||(16922978-16923062)
chr6 (1-88)||(26161305-26161391)
chr6 (5-88)||(16320700-16320784)
chr6 (20-81)||(791817-791878)
chr6 (1-88)||(26019101-26019188)
[»] chr3 (37 HSPs)
chr3 (1-97)||(12546-12642)
chr3 (1-97)||(8982735-8982831)
chr3 (1-97)||(25432272-25432368)
chr3 (1-97)||(1685874-1685970)
chr3 (1-97)||(6421714-6421810)
chr3 (1-97)||(8972152-8972248)
chr3 (1-97)||(12804846-12804942)
chr3 (1-97)||(16336001-16336097)
chr3 (1-97)||(20491467-20491563)
chr3 (1-97)||(55478602-55478698)
chr3 (1-97)||(6432154-6432250)
chr3 (1-97)||(10012786-10012882)
chr3 (2-87)||(17732308-17732393)
chr3 (2-87)||(19033539-19033624)
chr3 (2-97)||(4024950-4025045)
chr3 (1-88)||(2490167-2490255)
chr3 (1-104)||(4370417-4370520)
chr3 (1-104)||(4380163-4380266)
chr3 (1-88)||(4783588-4783676)
chr3 (1-88)||(18560330-18560418)
chr3 (1-88)||(20292541-20292629)
chr3 (1-88)||(51979338-51979424)
chr3 (2-87)||(24792856-24792941)
chr3 (2-87)||(24873836-24873921)
chr3 (2-87)||(49387932-49388017)
chr3 (1-88)||(5656459-5656547)
chr3 (1-88)||(9536314-9536402)
chr3 (1-88)||(9546736-9546824)
chr3 (1-88)||(13120546-13120634)
chr3 (1-88)||(19828851-19828939)
chr3 (1-88)||(20745640-20745728)
chr3 (135-382)||(20099293-20099539)
chr3 (1-88)||(13113417-13113506)
chr3 (1-76)||(11459459-11459533)
chr3 (2-104)||(24762947-24763049)
chr3 (1-65)||(11044781-11044845)
chr3 (5-65)||(21542857-21542917)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-97)||(75277-75373)
[»] chr7 (46 HSPs)
chr7 (1-97)||(9546077-9546173)
chr7 (1-97)||(32097792-32097888)
chr7 (1-97)||(46496304-46496400)
chr7 (1-97)||(46506916-46507012)
chr7 (2-97)||(9535794-9535889)
chr7 (1-97)||(16132615-16132711)
chr7 (1-97)||(16143179-16143275)
chr7 (1-97)||(32108229-32108325)
chr7 (4-103)||(14249087-14249186)
chr7 (1-104)||(14114629-14114732)
chr7 (1-104)||(14424279-14424382)
chr7 (2-97)||(42620593-42620688)
chr7 (2-97)||(22964806-22964901)
chr7 (1-104)||(2992461-2992564)
chr7 (1-87)||(13286360-13286446)
chr7 (2-87)||(12827937-12828022)
chr7 (2-87)||(31824128-31824213)
chr7 (1-104)||(12769528-12769631)
chr7 (1-88)||(43982513-43982601)
chr7 (1-88)||(5382551-5382639)
chr7 (1-88)||(5392205-5392293)
chr7 (1-88)||(5926094-5926182)
chr7 (1-88)||(6544044-6544132)
chr7 (1-88)||(8500144-8500232)
chr7 (1-88)||(8510614-8510702)
chr7 (1-88)||(11627201-11627289)
chr7 (1-88)||(26363952-26364040)
chr7 (1-88)||(27987901-27987989)
chr7 (2-87)||(5616073-5616158)
chr7 (1-88)||(6533745-6533833)
chr7 (1-88)||(24541456-24541544)
chr7 (1-88)||(26348932-26349020)
chr7 (1-88)||(44896584-44896672)
chr7 (1-88)||(44906935-44907023)
chr7 (2-87)||(25441559-25441644)
chr7 (2-87)||(42594761-42594846)
chr7 (20-104)||(9006333-9006417)
chr7 (5-88)||(19585166-19585250)
chr7 (5-97)||(14943727-14943816)
chr7 (5-97)||(15371320-15371409)
chr7 (2-71)||(10414868-10414937)
chr7 (1-51)||(19799113-19799164)
chr7 (2-87)||(41026949-41027034)
chr7 (2-87)||(33090591-33090675)
chr7 (1-31)||(45552608-45552638)
chr7 (1-57)||(17220220-17220276)
[»] chr2 (41 HSPs)
chr2 (1-97)||(17488102-17488198)
chr2 (1-97)||(2999259-2999355)
chr2 (1-97)||(45014144-45014240)
chr2 (1-97)||(24697055-24697151)
chr2 (1-97)||(29131542-29131638)
chr2 (1-97)||(38958289-38958385)
chr2 (2-97)||(44639468-44639563)
chr2 (2-97)||(45024222-45024317)
chr2 (1-94)||(38930956-38931049)
chr2 (2-87)||(15479323-15479408)
chr2 (1-90)||(15940103-15940192)
chr2 (1-90)||(24239710-24239799)
chr2 (1-88)||(22688253-22688341)
chr2 (6-88)||(3606492-3606574)
chr2 (20-104)||(72659-72743)
chr2 (1-88)||(4457298-4457386)
chr2 (1-88)||(4466923-4467011)
chr2 (1-88)||(5337947-5338035)
chr2 (1-88)||(5347843-5347931)
chr2 (1-88)||(9503566-9503654)
chr2 (1-88)||(9514932-9515020)
chr2 (5-88)||(12569975-12570059)
chr2 (1-88)||(16934859-16934947)
chr2 (1-88)||(17005519-17005607)
chr2 (1-88)||(32937981-32938069)
chr2 (1-88)||(4456234-4456322)
chr2 (1-88)||(18662499-18662587)
chr2 (1-88)||(45190235-45190323)
chr2 (2-87)||(22901491-22901576)
chr2 (2-87)||(22909363-22909448)
chr2 (3-87)||(16135701-16135785)
chr2 (1-88)||(18660758-18660846)
chr2 (2-87)||(27160509-27160594)
chr2 (2-87)||(27170878-27170963)
chr2 (1-86)||(573646-573732)
chr2 (2-87)||(23721347-23721432)
chr2 (5-88)||(18650433-18650517)
chr2 (252-448)||(23242476-23242672)
chr2 (9-87)||(19341707-19341785)
chr2 (1-88)||(40409606-40409692)
chr2 (1-31)||(45190174-45190204)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-97)||(4770-4866)
[»] scaffold0265 (1 HSPs)
scaffold0265 (4-104)||(10704-10803)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-97)||(52378-52474)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-97)||(93412-93508)
[»] chr8 (30 HSPs)
chr8 (1-97)||(791149-791245)
chr8 (1-97)||(7757176-7757272)
chr8 (1-97)||(21988570-21988666)
chr8 (1-97)||(21998088-21998184)
chr8 (8-104)||(20098234-20098330)
chr8 (1-97)||(25034709-25034805)
chr8 (2-97)||(17268255-17268350)
chr8 (1-90)||(5867953-5868042)
chr8 (1-94)||(21446842-21446935)
chr8 (2-88)||(5758790-5758877)
chr8 (1-104)||(2690839-2690943)
chr8 (2-88)||(12842073-12842158)
chr8 (1-88)||(20531904-20531992)
chr8 (2-87)||(26362918-26363003)
chr8 (1-88)||(9325823-9325911)
chr8 (1-88)||(14894694-14894782)
chr8 (1-88)||(21203656-21203744)
chr8 (1-88)||(21214072-21214160)
chr8 (1-88)||(21333355-21333443)
chr8 (1-88)||(25506887-25506975)
chr8 (1-88)||(32008381-32008469)
chr8 (1-87)||(37295367-37295453)
chr8 (1-88)||(13673568-13673656)
chr8 (1-88)||(14882328-14882416)
chr8 (1-88)||(31992013-31992101)
chr8 (1-65)||(3967406-3967471)
chr8 (2-87)||(14436780-14436865)
chr8 (1-88)||(33774704-33774792)
chr8 (1-104)||(20707561-20707662)
chr8 (50-88)||(11431243-11431281)
[»] chr5 (39 HSPs)
chr5 (1-97)||(11411724-11411820)
chr5 (1-97)||(26192763-26192859)
chr5 (1-97)||(26203323-26203419)
chr5 (1-97)||(32069852-32069948)
chr5 (1-97)||(27411560-27411656)
chr5 (1-104)||(23379132-23379235)
chr5 (1-104)||(20905301-20905403)
chr5 (1-88)||(206260-206348)
chr5 (1-88)||(33938486-33938573)
chr5 (1-88)||(33948886-33948973)
chr5 (1-95)||(22240424-22240518)
chr5 (1-88)||(22174083-22174171)
chr5 (1-88)||(8766278-8766366)
chr5 (1-88)||(13572493-13572581)
chr5 (1-88)||(18210656-18210744)
chr5 (1-88)||(20763746-20763834)
chr5 (1-88)||(21680925-21681013)
chr5 (1-88)||(21752453-21752541)
chr5 (1-88)||(21761876-21761964)
chr5 (1-88)||(27274962-27275050)
chr5 (1-88)||(37816965-37817053)
chr5 (1-104)||(20896338-20896440)
chr5 (2-87)||(20947199-20947284)
chr5 (2-87)||(20957588-20957673)
chr5 (1-88)||(4038761-4038849)
chr5 (1-88)||(18220006-18220094)
chr5 (1-88)||(18360484-18360572)
chr5 (1-88)||(18389484-18389572)
chr5 (1-88)||(19889123-19889211)
chr5 (1-88)||(30944627-30944715)
chr5 (1-88)||(30954049-30954137)
chr5 (1-88)||(31916198-31916286)
chr5 (1-88)||(37549402-37549490)
chr5 (1-88)||(37652200-37652288)
chr5 (1-88)||(37299612-37299700)
chr5 (1-88)||(42091301-42091391)
chr5 (15-104)||(31104835-31104924)
chr5 (2-87)||(19549047-19549133)
chr5 (1-48)||(34131268-34131316)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-104)||(199233-199337)
[»] scaffold0611 (1 HSPs)
scaffold0611 (1-96)||(7783-7878)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-97)||(12788-12883)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-104)||(13230-13333)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-82)||(65101-65182)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-97)||(15261-15357)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-97)||(310579-310674)
scaffold0005 (4-46)||(216031-216073)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-104)||(29316-29419)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-97)||(87377-87475)
[»] scaffold0277 (1 HSPs)
scaffold0277 (1-97)||(19936-20031)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-104)||(54033-54136)
scaffold0018 (1-104)||(57985-58088)
[»] scaffold0014 (5 HSPs)
scaffold0014 (1-104)||(167530-167633)
scaffold0014 (1-88)||(146114-146202)
scaffold0014 (1-88)||(234978-235066)
scaffold0014 (1-104)||(115079-115182)
scaffold0014 (1-88)||(154087-154175)
[»] scaffold1705 (1 HSPs)
scaffold1705 (1-88)||(49-137)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-88)||(22773-22861)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-88)||(33438-33526)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-88)||(112362-112450)
scaffold0031 (1-31)||(103164-103194)
[»] scaffold0764 (1 HSPs)
scaffold0764 (2-87)||(1377-1462)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-88)||(1437-1526)
[»] scaffold0313 (2 HSPs)
scaffold0313 (2-87)||(5147-5232)
scaffold0313 (2-87)||(19304-19389)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-87)||(267494-267579)
[»] scaffold0303 (1 HSPs)
scaffold0303 (1-88)||(12455-12543)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-88)||(8646-8734)
[»] scaffold0058 (4 HSPs)
scaffold0058 (1-88)||(67106-67194)
scaffold0058 (2-88)||(58863-58950)
scaffold0058 (1-88)||(24372-24460)
scaffold0058 (2-88)||(57745-57832)
[»] scaffold0590 (1 HSPs)
scaffold0590 (2-88)||(9684-9771)
[»] scaffold0234 (2 HSPs)
scaffold0234 (1-53)||(22915-22967)
scaffold0234 (54-97)||(21630-21673)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-53)||(132405-132457)
scaffold0004 (4-88)||(242249-242333)
[»] scaffold1411 (1 HSPs)
scaffold1411 (1-88)||(207-296)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1-65)||(275-340)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-65)||(22196-22261)
[»] scaffold0434 (1 HSPs)
scaffold0434 (2-82)||(13947-14027)
[»] scaffold0141 (1 HSPs)
scaffold0141 (2-88)||(18148-18235)
[»] scaffold0053 (1 HSPs)
scaffold0053 (30-97)||(1378-1445)
[»] scaffold0059 (1 HSPs)
scaffold0059 (2-85)||(41171-41255)
[»] scaffold1468 (1 HSPs)
scaffold1468 (22-88)||(745-811)
[»] scaffold0713 (1 HSPs)
scaffold0713 (1-65)||(5587-5651)


Alignment Details
Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6406477 - 6406374
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  6406477 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaatgtttaaatcataccaagatacaagaaatcaaaggacatttgaattcatgaa 6406378  T
Q  101 ctaa 104  Q
    ||||    
T  6406377 ctaa 6406374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17985521 - 17985425
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  17985521 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 17985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 18106163 - 18106067
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  18106163 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 18106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40921105 - 40921201
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  40921105 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 40921201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 52498543 - 52498639
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  52498543 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaaacataccaagaatcaagaaatcaaaggacatttgaattcat 52498639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9836695 - 9836599
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  9836695 cttggtatttaacttgtgctcttgagtgttttactaaaacaagaacaaggttttaatcataccaagattcaagaaatcaaaggacatttgaattcat 9836599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 16252825 - 16252921
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  16252825 cttggtatttaacttgtgctcttgagtgttttaataagacaggaacaatgtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 16252921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11476501 - 11476604
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||  ||||||||||||| ||||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||    
T  11476501 cttggtatttaacttgcactcttgagtgttttactaagataggaacaaggtataaattataccaagatacaagaaatcaaaggacatttgaattcatgaa 11476600  T
Q  101 ctaa 104  Q
    ||||    
T  11476601 ctaa 11476604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44888154 - 44888241
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  44888154 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaataataccaagatacatgaaatcaaaggacatt 44888241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2828958 - 2829046
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2828958 cttgatatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttaaatcataccaagatacatgaaatcaaaggacatt 2829046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7847426 - 7847323
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || ||  ||||||||||||| |||||||||| |    
T  7847426 cttggtatttaacttgtgctcttgagtgtttatactaagacaggaacaaggattaaatcataccaagatgcataaaatcaaaggaca-ttgaattcatga 7847328  T
Q  100 actaa 104  Q
    |||||    
T  7847327 actaa 7847323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16472057 - 16472144
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  16472057 cttggtatttaacttgtgctcttaagtattttactaagacaggaacaaggtttaaataataccaagacacaagaaatcaaaggacatt 16472144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17160652 - 17160747
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||| |||||||||| ||| ||||||||| ||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  17160652 ttggtatttaacttgcgctcttgagtatttcactaagacatgaacaaggtttcaatcataccaagaatcaagaaatcaaaggacatttgaattcat 17160747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15668600 - 15668696
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||| ||| |||||||||||  |  ||||||||||||||||||||||||||||    
T  15668600 cttggtatgtaacttgtgctcttgagtgttttaccaagacaggaacaaagttcaaatcataccaggaatcaagaaatcaaaggacatttgaattcat 15668696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26330638 - 26330734
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||| |  ||||||||||||| | ||||||||||||    
T  26330638 cttggtatttaacttgtgatcttgcgtgttttactaagacatgaacaaggtttaaatcataccaagaatcaagaaatcaaagaaaatttgaattcat 26330734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 4417117 - 4417216
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    |||||||| |||| |||||||||||||||||||||||  ||||| ||||| |||||||||| |||||| ||||||||||||||||| |||||| ||||||    
T  4417117 gtatttaaattgtactcttgagtgtttaactaagacaataacaaagtttacatcataccaagatacaaaaaatcaaaggacatttggattcatgaactaa 4417216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3488582 - 3488494
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  3488582 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 3488494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5294090 - 5294002
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  5294090 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 5294002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5303704 - 5303616
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  5303704 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 5303616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16248464 - 16248552
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  16248464 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 16248552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21845373 - 21845461
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21845373 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21854802 - 21854890
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21854802 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21854890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21901236 - 21901324
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21901236 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21901324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21910665 - 21910753
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21910665 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21910753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27681752 - 27681664
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  27681752 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 27681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27691363 - 27691275
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  27691363 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 27691275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1292765 - 1292854
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttg 90  Q
    |||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||| ||||||| || |||||||||||| ||||||||    
T  1292765 cttggtatttaacttgtgatattgagtgttttattaagacatgaacaaggtttaaattataccaagattcaagaaatcaaatgacatttg 1292854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16628918 - 16629007
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaataca-agaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || || | |||||||||||||||    
T  16628918 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaaatcaaaggacatt 16629007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3497849 - 3497761
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||| || ||  |||||||||||||||    
T  3497849 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataacaagatgcataaaatcaaaggacatt 3497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 3606695 - 3606607
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttt-aactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||| || ||  |||||||||||||||    
T  3606695 cttggtatttaacttgtgctcttgagtgttttaactaagacagaaaaaaggtttgaatcataccaagatgcataaaatcaaaggacatt 3606607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6691395 - 6691483
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| || ||  |||||||||||||||    
T  6691395 cttggtatttaacttgtgctcttgagtgttttcactaagacaggatcaaggtttgaatcataccaagatgcataaaatcaaaggacatt 6691483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6701801 - 6701889
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| || ||  |||||||||||||||    
T  6701801 cttggtatttaacttgtgctcttgagtgttttcactaagacaggatcaaggtttgaatcataccaagatgcataaaatcaaaggacatt 6701889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17829229 - 17829141
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  17829229 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 17829141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17838620 - 17838532
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  17838620 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 17838532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 522880 - 522795
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || | ||||||| ||||||  |||||||||||||    
T  522880 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaatttataccaagatacaaagaatcaaaggacat 522795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 26457754 - 26457839
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| || || ||||||| | ||||||  |||||||||||||    
T  26457754 ttggtatttaacttgtgctcttgggtggttaactaagacaggaacaagtttcaattcatacccagatacaaagaatcaaaggacat 26457839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12865745 - 12865833
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||  ||| ||||||||||| || ||  |||||||||||||||    
T  12865745 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaaatttgaatcataccaagatgcataaaatcaaaggacatt 12865833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13403671 - 13403575
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| | |||||||| || ||    ||||||||| ||| |  ||||||||||||||||||||||||||||    
T  13403671 cttggtatttaacttgtgctcttgagtgttttattaagacagaaataaaagataaatcatatcaagaatcaagaaatcaaaggacatttgaattcat 13403575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 17421983 - 17421899
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| || || ||||| ||| ||||||  |||||||||||||    
T  17421983 ttggtatttaacttgtgctcttgagtgattaactaagaca-gaacaagtttcaattcatatcaagatacaaagaatcaaaggacat 17421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 16211824 - 16211756
Alignment:
Q  20 tcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||| ||||| ||||||  ||||| |||||||||||||||| ||||||||||||||||||||||    
T  16211824 tcttgagtgattaaccaagacacaaacaaagtttaaatcataccaagatacaagaaatcaaaggacatt 16211756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 10234505 - 10234618
Alignment:
Q  267 ctattggggcgtatttgtgacggcgccacattcaaaaacttcagaacatccttctcaaacgtcgtaaaagggatcgtcaccccaaactcctccaaaaccg 366  Q
    ||||| || |||||||| || ||||||||||||| |||||| || |||||| |||||||   ||||||  || |||||||||||||||| ||||| ||||    
T  10234505 ctattaggacgtatttgcgaaggcgccacattcagaaactttagcacatccatctcaaaatccgtaaa--gggtcgtcaccccaaactcttccaacaccg 10234602  T
Q  367 ccatatacattagaaa 382  Q
     ||||||||| |||||    
T  10234603 tcatatacataagaaa 10234618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 14601347 - 14601305
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaac 46  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  14601347 ggtatttaacttgtgctcttgagtattttactaagacatgaac 14601305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 53946937 - 53946871
Alignment:
Q  22 ttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||| ||||| ||||||  || || |||||||| ||||||| ||||||||||||||| ||||||    
T  53946937 ttgagtgattaaccaagacacaaataaagtttaaataataccaagatacaagaaatcaaaagacatt 53946871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 22761418 - 22761530
Alignment:
Q  279 atttgtgacggcgccacattcaaaaacttcagaacatccttctcaaacgtcgtaaaagggatcgtcaccccaaactcctccaaaaccgccatatacatta 378  Q
    ||||| |||||| ||||||||| | ||||||  || ||| ||||||| | ||| || || ||| |||| ||||| ||||| || | ||||||||||||||    
T  22761418 atttgagacggcaccacattcagatacttcaagacgtccatctcaaaaggcgtcaagggaatcttcacgccaaattcctctaagatcgccatatacatta 22761517  T
Q  379 gaaatgactcgtc 391  Q
      |||||||||||    
T  22761518 tgaatgactcgtc 22761530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 6e-42; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1187066 - 1186963
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||    
T  1187066 cttggtatttaacttgtgctcttgagtgtttaactaagacagaaacaaggtttaaatcataccaagatacaagaaatcaaaggacatttggattcatgaa 1186967  T
Q  101 ctaa 104  Q
    ||||    
T  1186966 ctaa 1186963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2115413 - 2115509
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  2115413 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 2115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 41544770 - 41544674
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  41544770 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaagtttaaatcataccaaaaatcaagaaatcaaaggacatttgaattcat 41544674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42033604 - 42033700
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  42033604 cttggtatttaacttgtgctcttgagtgttttactaagataggaacaaggtttaaatcataccaaaaatcaagaaatcaaaggacatttgaattcat 42033700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22960292 - 22960394
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||    
T  22960292 cttgatatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagatacaagaaatcaaaggaca-ttgaattcatgaa 22960390  T
Q  101 ctaa 104  Q
    ||||    
T  22960391 ctaa 22960394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 21822105 - 21822006
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaacta 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||    
T  21822105 ggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagatacaagaaatcaaaggaca-atgaattcatgaacta 21822007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21457949 - 21458045
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |  ||||||||||||||||||||||||||||    
T  21457949 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaaccataccaagaatcaagaaatcaaaggacatttgaattcat 21458045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22406916 - 22406820
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||    
T  22406916 cttggtatttaacttgtgctcttaagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgatttcat 22406820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21782108 - 21782210
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||  |||||||||| ||    
T  21782108 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcagaccaagatagaagaaatcaaaggac-gttgaattcatgaa 21782206  T
Q  101 ctaa 104  Q
    ||||    
T  21782207 ctaa 21782210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8539663 - 8539759
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||  |  ||||||||||||||||||||||||||||    
T  8539663 cttggtatttaacttgtgctcttgagtgtttcactaagacaggagcaaggtttaaatcatatcaggaatcaagaaatcaaaggacatttgaattcat 8539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8604902 - 8604998
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||  |  ||||||||||||||||||||||||||||    
T  8604902 cttggtatttaacttgtgctcttgagtgtttcactaagacaggagcaaggtttaaatcatatcaggaatcaagaaatcaaaggacatttgaattcat 8604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 16154295 - 16154391
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| |  ||||||||||||||||||||||| ||||    
T  16154295 cttggtatttaacttgtgctcttgagtgttttactaagacatgaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaactcat 16154391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 34822436 - 34822542
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcatacca----aaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    | ||||||||||||||||||||||||| || ||    
T  34822436 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaatgtttaattcataccaagatatatacaagaaatcaaaggacatttgactttat 34822535  T
Q  98 aaactaa 104  Q
     ||||||    
T  34822536 gaactaa 34822542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2371055 - 2370959
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||||| || |||||||||||| |||||||| ||||||    
T  2371055 cttggtatttaacttgtactcttgagtgttttagtaagacatgaacaaggtttaaatcataccaagattcaagaaatcaaaagacatttggattcat 2370959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25018881 - 25018976
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||    
T  25018881 cttggtatttaacttgtgctcttgagtgttttactaagacagg-acaatatttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 25018976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 18097590 - 18097507
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  18097590 gtatttaacttgtgttcttgagtgttttactaagacaggaacaaggtttaaataataccaagatacaagaaatcaaagaacatt 18097507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 21885727 - 21885822
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  21885727 ttggtatttaacttgtgctcttgagtgttttacttagacagaaacaaagtttaaatcatagcaagaatcaagaaatcaaaggacatttgaattcat 21885822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30550253 - 30550157
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||  ||||| |||| |  ||||||||||||||||||||||||||||    
T  30550253 cttggtatttaacttgtgctcttgagtgttttactaagacatgaacaatgtttttatcattccaagaatcaagaaatcaaaggacatttgaattcat 30550157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 13964310 - 13964405
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||| ||||| ||||| ||| |||||||| |||||||||||||||||||||||  |  ||||||||||||||||||||||||||||    
T  13964310 ttggtatttaacttctgctcgtgagtattttactaagactggaacaaggtttaaatcataccatgaatcaagaaatcaaaggacatttgaattcat 13964405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 18382780 - 18382867
Alignment:
Q  6 tatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaat 93  Q
    ||||||| |||||||||||||| ||| |||||||||| ||  |||||||||||||||||| || ||||||||||||||||||||||||    
T  18382780 tatttaaattgtgctcttgagtattttactaagacagaaatcaggtttaaatcataccaagattcaagaaatcaaaggacatttgaat 18382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20311699 - 20311790
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttga 91  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||| |||||||||    
T  20311699 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaagacatttga 20311790  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37011424 - 37011511
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||| |||||  ||| |||||||||||    
T  37011424 cttggtatttaacttgtgctcttgagtgttttactaagacatgaacaaggtttgaataataccaagatacattaaaacaaaggacatt 37011511  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1968757 - 1968846
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||       ||||||||||||||||||||||||||||    
T  1968757 cttgatatttaacttgtgctcttgagtgttttactaagacagaaacaaagtttaaatcatac-------caagaaatcaaaggacatttgaattcat 1968846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 20308221 - 20308311
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttga 91  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  ||||||||||||||||||    
T  20308221 ttggtatttaacttgtgctcttgagtgttttcactaagacatgaacaaggtttgaatcataccaagatgcataaaatcaaaggacatttga 20308311  T

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Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 1975367 - 1975282
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  1975367 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 1975282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 41207915 - 41208000
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| || || ||||||||| ||||||  |||||||||||||    
T  41207915 ttggtatttaacttgtgctcttgagtggttaactaagacagaaacaagtttcaattcataccaagatacaaagaatcaaaggacat 41208000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25867665 - 25867753
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  25867665 cttggtatttaaattgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 25867753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26194101 - 26194013
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||    
T  26194101 cttggtatttaacttgtgctcttgactgtttttactaagacatgaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 26194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27065486 - 27065574
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||| ||||||    
T  27065486 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaagacatt 27065574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 1982733 - 1982648
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  1982733 ttggtatttaacttgtgttcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 1982648  T

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Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 1990151 - 1990066
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  1990151 ttggtatttaacttgtgttcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 1990066  T

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Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12418249 - 12418337
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| || || | ||||||||||| || ||  |||||||||||||||    
T  12418249 cttggtatttaacttgtgctcttgagtgttttaactaagacaggaaaaaagtatgaatcataccaagatgcataaaatcaaaggacatt 12418337  T

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Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 20329037 - 20328953
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| || ||||||||||| || ||  |||||||||||||||    
T  20329037 gtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggcttgaatcataccaagatgcataaaatcaaaggacatt 20328953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 25824087 - 25824005
Alignment:
Q  15 tgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||| ||||||||| ||||| ||||||  |||||  ||||||||||||||| ||||||||||||||||||  |||||||||||    
T  25824087 tgtgttcttgagtgattaaccaagacacaaacaaattttaaatcataccaagatacaagaaatcaaaggatgtttgaattcat 25824005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 18062853 - 18062769
Alignment:
Q  20 tcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    ||||||||| ||||| |||| |  ||||| |||||||||| ||||| ||||||||||| |||||||| |||||||||| ||||||    
T  18062853 tcttgagtgattaaccaagaaacaaacaaagtttaaatcaaaccaagatacaagaaataaaaggacacttgaattcatgaactaa 18062769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 388
Target Start/End: Complemental strand, 18624964 - 18624752
Alignment:
Q  176 ttttgttccataaaaatgcaagaagacgccaaccgaaggttccagacttaaagctttacacaaaatctctaaacctcggataaatacccaactattgggg 275  Q
    |||||| ||||||||||| ||||||||||||||  |||| ||||  || ||||||||| | |  || || || || ||||||||  ||||  ||||  ||    
T  18624964 ttttgtcccataaaaatgaaagaagacgccaacataaggctccaagctcaaagctttatagagtatttcaaatccacggataaaagcccagatattatgg 18624865  T
Q  276 cgtatttgtgacggcgccacattcaaaaacttcagaacatccttctcaaacgtcgtaaaagggatcgtcaccccaaactcctccaaaaccgccatataca 375  Q
    | |||||| || |||||||| ||||  || || |  |||||| |||||||    |||||||| ||| | ||||||||||| ||||| |||||||||||||    
T  18624864 catatttgcgaaggcgccacgttcaggaattttaacacatccgtctcaaaatcagtaaaaggaatcataaccccaaactcttccaacaccgccatataca 18624765  T
Q  376 ttagaaatgactc 388  Q
    | ||||| |||||    
T  18624764 taagaaaagactc 18624752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 49332764 - 49332830
Alignment:
Q  22 ttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||| ||||| ||||||  ||||| |||||||| ||||||| || |||||||||||||||||||    
T  49332764 ttgagtgattaaccaagacacaaacaaagtttaaataataccaagatgcaagaaatcaaaggacatt 49332830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 30209600 - 30209683
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||| |||| ||||||||  |||||||||||| ||| || || ||||||| |||||||  |||| |||||||| |||||    
T  30209600 gtatttaacatgtgttcttgagttattaactaagacacgaaaaacgtataaatcaaaccaaaaagcaagtaatcaaagaacatt 30209683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 4950434 - 4950463
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttt 31  Q
    ||||||||||||||||||||||||||||||    
T  4950434 ttggtatttaacttgtgctcttgagtgttt 4950463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 4e-40; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 27788215 - 27788119
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27788215 cttggtatttaacttgtgctcttgagtgtttaactaagacatgaacaatgtttaaatcataccaagatacaagaaatcaaaggacatttgaattcat 27788119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24922649 - 24922553
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  24922649 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 24922553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24931685 - 24931589
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  24931685 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 24931589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12454374 - 12454470
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  12454374 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 12454470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18159139 - 18159235
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  18159139 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 18159235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26425966 - 26426062
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  26425966 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 26426062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20911713 - 20911806
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaatt 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  20911713 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaatt 20911806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 20926162 - 20926255
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattc 95  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||    
T  20926162 ttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattc 20926255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3285258 - 3285354
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  3285258 cttgttatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttatatcataccaataatcaagaaatcaaaggacatttgaattcat 3285354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29539870 - 29539966
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  29539870 cttggtatttaacttgtgctcttgagtgttatactaagacaggaacaaagtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 29539966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23777881 - 23777974
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaatt 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |  |||||||||||||||||||||||||    
T  23777881 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaagttttgaatcataccaagaatcaagaaatcaaaggacatttgaatt 23777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 14791015 - 14791111
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||| |  |||||||||||||||||||||| |||||    
T  14791015 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcatgccaagaatcaagaaatcaaaggacatttgatttcat 14791111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31356881 - 31356977
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |  |||||||||||||| |||||||||||||    
T  31356881 cttggtatttaacttgtgctattgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaagggcatttgaattcat 31356977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31366609 - 31366705
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |  |||||||||||||| |||||||||||||    
T  31366609 cttggtatttaacttgtgctattgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaagggcatttgaattcat 31366705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18200684 - 18200780
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |  || ||| |||||||||||||||||||||    
T  18200684 cttggtatttaacttgtgttattgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcatgaattcaaaggacatttgaattcat 18200780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30658808 - 30658721
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  30658808 cttggtatttaatttgtgctcttgagtgttttactaagacagaaacaaggtttgaataataccaagatacatgaaatcaaaggacatt 30658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1595842 - 1595930
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  1595842 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 1595930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12991222 - 12991134
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  12991222 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 12991134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16907739 - 16907827
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  16907739 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 16907827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17823497 - 17823585
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||| || || ||||||||||||||||    
T  17823497 cttggtatttaacttgtgctcttgagtgtttttactacgacaggaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 17823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 16897087 - 16897174
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  16897087 ttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 16897174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18168957 - 18169047
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||      | ||||||||||| |  ||||||||||||||||||||||||||||    
T  18168957 cttggtatttaacttgtgctcttgagtgttttactaagacaggaac------tgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 18169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 24692245 - 24692330
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| || || ||||||||| ||||||  |||||||||||||    
T  24692245 ttggtatttaacttgtgctcttgagtggttaactaagacatgaacaagtttcaattcataccaagatacaaagaatcaaaggacat 24692330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26021850 - 26021762
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  26021850 cttggtatttaacttgtgctcttgagtgttttcactaagataggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 26021762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7756103 - 7756021
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaag 82  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || ||  |||||||||    
T  7756103 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaag 7756021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 24370962 - 24370892
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaa 72  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||| ||||||    
T  24370962 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaattcataccaagatacaa 24370892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 8563886 - 8563801
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| || || | ||||||| ||||||  |||||||||||||    
T  8563886 ttggtatttaacttgtgctcttgagtggttaactaagacaggaaaaagtttcaatttataccaagatacaaagaatcaaaggacat 8563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18712854 - 18712750
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||| |||||||||||| |||||  |||||| |||||||||||||| ||||||||||| || || |||||||||||||| |||||| ||| |    
T  18712854 cttggtatttaagttgtgctcttgaatgtttttactaaggcaggaacaaggtttgaatcataccaagatgcatgaaatcaaaggaca-ttgaatccatga 18712756  T
Q  100 actaaa 105  Q
    ||||||    
T  18712755 actaaa 18712750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 34764735 - 34764820
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || |||||| || ||||||  |||||||||||||    
T  34764735 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcatacgaagatacaaagaatcaaaggacat 34764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24506074 - 24505986
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||| ||||||||||||||||||||||||||  |||| |||||||||||||||| |||||||| || |||||  |||||||||||||||    
T  24506074 cttgatatttaacttgtgctcttgagtgttttcactatgacaggaacaaggtttgaatcatactaagatacataaaatcaaaggacatt 24505986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16922978 - 16923062
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||| ||| |||  ||||||| || |||||||||||||||||||||| ||||| ||||||||| ||||||    
T  16922978 gtatttaacttgtgctcttaagtttttttactaagatagaaacaaggtttaaatcataccaagatacatgaaatcaaatgacatt 16923062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26161305 - 26161391
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||  ||||||||  |||||||||| || ||||||| ||||||||||| || || ||||||||||||||||    
T  26161305 cttggtatttaacttgtgctc--gagtgtttttactaagacagaaaaaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 26161391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16320700 - 16320784
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||| || |||||||||| |||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  16320700 gtatttagctggtgctcttgaatgtttttactaagacaggaacaaggtttgaatcataccaagatgcattaaatcaaaggacatt 16320784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 791878 - 791817
Alignment:
Q  20 tcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaa 81  Q
    ||||||||| ||||| ||||||  |||||||||||||| || |||| |||||||||||||||    
T  791878 tcttgagtgattaaccaagacacaaacaaggtttaaataatcccaagatacaagaaatcaaa 791817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26019101 - 26019188
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||| | || |||| |||| |||||| ||||| ||||||||| ||||||| ||||| || ||||  ||||||| |||||    
T  26019101 cttggtatttaacatatgttcttaagtgattaactcagacatgaacaaggtataaatcaaaccaagattcaagtgatcaaagaacatt 26019188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12642 - 12546
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  12642 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaaaaatcaagaaatcaaaggacatttgaattcat 12546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8982735 - 8982831
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  8982735 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 8982831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25432272 - 25432368
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  25432272 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 25432368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1685970 - 1685874
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  1685970 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 1685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6421714 - 6421810
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  6421714 cttggtatttaacttgtgctcttgagtgttttactaagataggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 6421810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 8972152 - 8972248
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  8972152 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 8972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12804942 - 12804846
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  12804942 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 12804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16336097 - 16336001
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  16336097 cttggtatttaacttgtgctattgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 16336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20491467 - 20491563
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||    
T  20491467 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaataaatcaaaggacatttgaattcat 20491563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 55478698 - 55478602
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  55478698 cttggtatttaacttgtgctattgagtgttttactaagacgggaacaaggtttaaatcataccaagattcaagaaatcaaaggacatttgaattcat 55478602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6432154 - 6432250
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  6432154 cttggtattcagcttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 6432250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 10012882 - 10012786
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  10012882 cttggtatttaacttgtactcttgagtgttttactaagacaggaacaatgtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 10012786  T

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Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 17732308 - 17732393
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  17732308 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaattcataccaagaaataagaaatcaaaggacat 17732393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 19033539 - 19033624
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  19033539 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaattcataccaagaaataagaaatcaaaggacat 19033624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 4025045 - 4024950
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||| |  |||||||| |||||||||||||||||||    
T  4025045 ttggtatttaacttctgctcttgagtgttttactaagactggaacaatgtttaaatcataccaagaatcaagaaattaaaggacatttgaattcat 4024950  T

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Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2490255 - 2490167
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  2490255 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 2490167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4370417 - 4370520
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||| ||||||| ||| |    
T  4370417 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggac-tttgaatccatga 4370515  T
Q  100 actaa 104  Q
    |||||    
T  4370516 actaa 4370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4380163 - 4380266
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||| ||||||| ||| |    
T  4380163 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggac-tttgaatccatga 4380261  T
Q  100 actaa 104  Q
    |||||    
T  4380262 actaa 4380266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4783676 - 4783588
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  4783676 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 4783588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18560330 - 18560418
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  18560330 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 18560418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20292541 - 20292629
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || || || ||||||||||||||||    
T  20292541 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcatactaagatgcatgaaatcaaaggacatt 20292629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 51979424 - 51979338
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  51979424 cttgatatttaacttgtgctcttgaatgttttactaagacaggaacaatgtttaaataataccaagatacaag-aatcaaaggacatt 51979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 24792856 - 24792941
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| || || ||||||||| ||||||  |||||||||||||    
T  24792856 ttggtatttaacttgtgctcttgagtggttaactaagacagaaacaagtttcaattcataccaagatacaaagaatcaaaggacat 24792941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 24873921 - 24873836
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || || | ||||||| ||||||  |||||||||||||    
T  24873921 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaatttataccaagatacaaagaatcaaaggacat 24873836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 49388017 - 49387932
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  49388017 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 49387932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5656547 - 5656459
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  5656547 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 5656459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9536314 - 9536402
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  9536314 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 9536402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9546736 - 9546824
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  9546736 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 9546824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13120634 - 13120546
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  13120634 cttggtatttaacttgtgctcttgagtgtttttactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 13120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19828939 - 19828851
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  19828939 cttggtatttaacttgtgctcttaagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 19828851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20745728 - 20745640
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  20745728 cttggtatttaacttgtgatcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 20745640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 135 - 382
Target Start/End: Complemental strand, 20099539 - 20099293
Alignment:
Q  135 ggatgggcactaatagagatccacgttcctttattaaggtcttttgttccataaaaatgcaagaagacgccaaccgaaggttccagacttaaagctttac 234  Q
    |||||||||||||| || |||||| | |||||||| |  ||||| || ||||  ||||| | |||||||| | | |||||||||| ||||||||||||||    
T  20099539 ggatgggcactaatcgaaatccacatccctttattgacatctttagtcccattgaaatgaaggaagacgc-agcagaaggttccaaacttaaagctttac 20099441  T
Q  235 acaaaatctctaaacctcggataaatacccaactattggggcgtatttgtgacggcgccacattcaaaaacttcagaacatccttctcaaacgtcgtaaa 334  Q
    ||| ||| || ||||| ||||||||  || | ||||| || |||||||| |||||  |||| ||||| | | |||  |||||| |||| |||| ||| ||    
T  20099440 acagaatttcaaaaccacggataaacgccaagctattaggacgtatttgagacggttccacgttcaagagcatcaacacatccatctcgaacgccgtgaa 20099341  T
Q  335 agggatcgtcaccccaaactcctccaaaaccgccatatacattagaaa 382  Q
    ||  || || ||||| || |||||||  |||||||||||||| |||||    
T  20099340 agtaattgttaccccgaattcctccagcaccgccatatacatcagaaa 20099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13113506 - 13113417
Alignment:
Q  1 cttggtatttaacttgtgctcttgag-tgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  13113506 cttggtatttaacttgtgctcttgaggtgtttttactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 13113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11459459 - 11459533
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaa 76  Q
    |||| ||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||| ||| ||||| ||||    
T  11459459 cttgatatttaacttgtgct-ttgagtgtttaagtaagagaggaacaatgtttaaatcatatcaagatacaggaaa 11459533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 24762947 - 24763049
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||| ||| |||| |||||  ||| |||||| ||||| |||| ||||||||||| || || |||||||||||||| |||||||||| ||    
T  24762947 ttggtatttaacttgcgcttttgaatgtttttactcagacagaaacaatgtttgaatcataccaagatgcatgaaatcaaaggaca-ttgaattcatgaa 24763045  T
Q  101 ctaa 104  Q
    ||||    
T  24763046 ctaa 24763049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11044845 - 11044781
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaa 65  Q
    |||||||| ||| ||||| |||||||||||||||||| |||  ||||| || ||||||| |||||    
T  11044845 cttggtatctaatttgtgttcttgagtgtttaactaaaacataaacaaagtataaatcaaaccaa 11044781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21542917 - 21542857
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaa 65  Q
    |||||||| ||||  ||||||||||||||||||||||  ||||| || |||||||| ||||    
T  21542917 gtatttaatttgtattcttgagtgtttaactaagacataaacaaagtataaatcattccaa 21542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 75373 - 75277
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  75373 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 75277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 9e-38; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9546173 - 9546077
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  9546173 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 9546077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32097792 - 32097888
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||    
T  32097792 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgatttcat 32097888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46496304 - 46496400
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  46496304 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 46496400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46506916 - 46507012
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  46506916 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 46507012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 9535889 - 9535794
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  9535889 ttggtatttaacttgtgctcttgagtgttttactaagacaggaacaatgtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 9535794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16132711 - 16132615
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  16132711 cttggtatttaacttgtgctcttgagtgttttattaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 16132615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16143275 - 16143179
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  16143275 cttggtatttaacttgtgctcttgagtgttttattaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 16143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32108229 - 32108325
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||| |||||    
T  32108229 cttggtatttaacttgtgctcttgagtgttttactaagacagaaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgatttcat 32108325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 14249186 - 14249087
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaacta 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||| |||||||||||||||||| |||||||||||| |||||    
T  14249186 ggtatttaacttgtgctcttgagtgtttaactaagaaaggaacaaagattaaatcattccaagatacaagaaatcaaaggatatttgaattcatgaacta 14249087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14114732 - 14114629
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||| || ||||||||||||||| || || ||    
T  14114732 cttggtatttaacttgtgctcttgagtgtttaactaagacaggagcaaagtttaagtcataccaagatacaaaaattcaaaggacatttgactttatgaa 14114633  T
Q  101 ctaa 104  Q
    ||||    
T  14114632 ctaa 14114629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14424382 - 14424279
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||| || ||||||||||||||| || || ||    
T  14424382 cttggtatttaacttgtgctcttgagtgtttaactaagacaggagcaaagtttaagtcataccaagatacaaaaattcaaaggacatttgactttatgaa 14424283  T
Q  101 ctaa 104  Q
    ||||    
T  14424282 ctaa 14424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 42620593 - 42620688
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  42620593 ttggtatttaatctgtgctcttaagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 42620688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 22964901 - 22964806
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||| ||| |  ||||||||||||||||||||||||||||    
T  22964901 ttggtatttaacttgtgctcttgagtgttttacttagacagaaacaaagtttaaatcatagcaagaatcaagaaatcaaaggacatttgaattcat 22964806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2992564 - 2992461
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||| ||||||||| |||||||| ||||||||||||||| |||| | || |||||||| ||| || |||||||||||||||||||||||||||| ||    
T  2992564 cttggtagttaacttgttctcttgagggtttaactaagacagaaacatgtttcaaatcatatcaagattcaagaaatcaaaggacatttgaattcatgaa 2992465  T
Q  101 ctaa 104  Q
    ||||    
T  2992464 ctaa 2992461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13286446 - 13286360
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||| ||||||  |||||||||||||    
T  13286446 cttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaattcataccaagatacaaagaatcaaaggacat 13286360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 12828022 - 12827937
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||| ||||||  |||||||||||||    
T  12828022 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaattcataccaagatacaaagaatcaaaggacat 12827937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 31824128 - 31824213
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||| ||||||  |||||||||||||    
T  31824128 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaattcataccaagatacaaagaatcaaaggacat 31824213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12769528 - 12769631
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    ||||||||||||||||| ||||||||| |||  |||||||||| |||||||||||||||| ||||| |||||||||||||||||| | |||||||||| |    
T  12769528 cttggtatttaacttgtactcttgagtctttttactaagacagaaacaaggtttaaatcacaccaacatacaagaaatcaaagga-aattgaattcatga 12769626  T
Q  100 actaa 104  Q
    |||||    
T  12769627 actaa 12769631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43982513 - 43982601
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  43982513 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 43982601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5382639 - 5382551
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  5382639 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 5382551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5392293 - 5392205
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  5392293 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 5392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5926094 - 5926182
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || || ||  |||||||||||||||    
T  5926094 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcatacaaagatgcataaaatcaaaggacatt 5926182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6544044 - 6544132
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  6544044 cttgatatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 6544132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8500144 - 8500232
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  8500144 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 8500232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8510614 - 8510702
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  8510614 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 8510702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11627289 - 11627201
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  11627289 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 11627201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26364040 - 26363952
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  26364040 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 26363952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27987901 - 27987989
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  27987901 cttggtatttaacttgtgctcttgagtgtttttactaagataggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 27987989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 5616158 - 5616073
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || | ||||||| ||||||  |||||||||||||    
T  5616158 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtataaattaataccaagatacaaagaatcaaaggacat 5616073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6533745 - 6533833
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || || ||  |||||||||||||||    
T  6533745 cttgatatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcatacaaagatgcataaaatcaaaggacatt 6533833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24541544 - 24541456
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||||| |||| |||||| || ||  |||||||||||||||    
T  24541544 cttggtatttaacttgtgctcttgagtgttttcactaagacagaaacaaggtttgaatcttaccaagatgcataaaatcaaaggacatt 24541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26349020 - 26348932
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||| | ||||||||||| || ||  |||||||||||||||    
T  26349020 cttggtatttaacttgtgctcttgagtgttttcactaagacagaaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 26348932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44896584 - 44896672
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  44896584 cttggtatttaacttgtgttcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 44896672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44906935 - 44907023
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  44906935 cttggtatttaacttgtgttcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 44907023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 25441559 - 25441644
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| ||  ||||||  |||||||| ||||    
T  25441559 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtttcaattcatatcatgatacaaagaatcaaagaacat 25441644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 42594761 - 42594846
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||| || || | ||||||| ||||||  |||||||||||||    
T  42594761 ttggtatttaacttgtgttcttgagtggttaactaagaaaggaacaagtttcaatttataccaagatacaaagaatcaaaggacat 42594846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 9006333 - 9006417
Alignment:
Q  20 tcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    ||||||||| ||||| ||||||  ||||| ||| |||||||||||| |||||||||||||||||| ||||||||| || ||||||    
T  9006333 tcttgagtgattaacgaagacaaaaacaaagttcaaatcataccaagatacaagaaatcaaaggatatttgaattaatgaactaa 9006417  T

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Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 19585166 - 19585250
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| || || ||  |||||||| ||||||    
T  19585166 gtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcatactaagatgcataaaatcaaatgacatt 19585250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 14943727 - 14943816
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||  | |||||||||   |||||||||||||||| || |  |||||||| ||||||||||| |||||||    
T  14943727 gtatttaacttgtgctcttgagtgttatagtaagacagg---aaggtttaaatcatactaagaatcaagaaattaaaggacatttcaattcat 14943816  T

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Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 15371320 - 15371409
Alignment:
Q  5 gtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||  | |||||||||   |||||||||||||||| || |  |||||||| ||||||||||| |||||||    
T  15371320 gtatttaacttgtgctcttgagtgttatagtaagacagg---aaggtttaaatcatactaagaatcaagaaattaaaggacatttcaattcat 15371409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 10414868 - 10414937
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaataca 71  Q
    |||||||||||||||||||||||||||||| |||||||  | |||||||||| ||| ||||||| |||||    
T  10414868 ttggtatttaacttgtgctcttgagtgttttactaagatcgaaacaaggtttgaataataccaagataca 10414937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19799113 - 19799164
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggt 51  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  19799113 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggt 19799164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 41026949 - 41027034
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| ||| || |  ||||||||| | ||||  |||||||||||||    
T  41026949 ttggtatttaacttgtgctcttgagtggttcactgagacaggaaaaagtttcacttcataccaagacacaaagaatcaaaggacat 41027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 33090591 - 33090675
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||| ||||| | |||| |||||| ||||| || |||||| ||||||||||||| || ||| |||||||||||| ||||    
T  33090591 ttggtatttaatttgtgttattgaatgttta-ctaagtcaagaacaacgtttaaatcatacaaagataaaagaaatcaaagaacat 33090675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 45552608 - 45552638
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttt 31  Q
    |||||||||||||||||||||||||||||||    
T  45552608 cttggtatttaacttgtgctcttgagtgttt 45552638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17220276 - 17220220
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaat 57  Q
    ||||||||||||  |||| ||||||||| |||||||||||| |||||| || |||||    
T  17220276 cttggtatttaatatgtgttcttgagtgattaactaagacatgaacaaagtataaat 17220220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 9e-38; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 17488102 - 17488198
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  17488102 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 17488198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2999355 - 2999259
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  2999355 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 2999259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 45014144 - 45014240
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  45014144 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 45014240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24697151 - 24697055
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  24697151 cttggtatttaacttgtgctcttgagtgttttactaagataggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 24697055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 29131638 - 29131542
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  29131638 cttggtatttatcttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 29131542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38958385 - 38958289
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |  ||| |||||||||||| |||||||||||    
T  38958385 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagaatcaataaatcaaaggacgtttgaattcat 38958289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 44639563 - 44639468
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||    
T  44639563 ttggtatttaatttgtgctcttgagtgttttactaagacaggaacaagatttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 44639468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 45024222 - 45024317
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  45024222 ttggtatttaacttgtgctcttgagtgttttactaagacaagaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 45024317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38931049 - 38930956
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaatt 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |  ||| |||||||||||||||||||||    
T  38931049 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcacaccaagaatcaataaatcaaaggacatttgaatt 38930956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 15479408 - 15479323
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| | ||||||||| |||||||||    
T  15479408 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaagtttaattcgtaccaagaaacaagaaataaaaggacat 15479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15940103 - 15940192
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttg 90  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||| || ||||||||||||||| |||||    
T  15940103 cttggtatttaaattgtgctcttgagtgttttactaagacaggaacaaggtttaatttataccaagattcaagaaatcaaaggatatttg 15940192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24239799 - 24239710
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttg 90  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||| || |||||||||||||||||||||    
T  24239799 cttggtatttaacttgtgctcttaagtgttttactaagacatgaataaggtttaaattataccaagattcaagaaatcaaaggacatttg 24239710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22688341 - 22688253
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||    
T  22688341 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 22688253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 3606574 - 3606492
Alignment:
Q  6 tatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  3606574 tatttaacttgtgctcttgagtgttttactaagacatgaacaaggtttgaataataccaagatacatgaaatcaaaggacatt 3606492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 72743 - 72659
Alignment:
Q  20 tcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    ||||||||| ||||| ||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  72743 tcttgagtgattaaccaagacacaaacaaagtttaaatcataccaagatacaagaaatcaaaggacatttgaattcatgaactaa 72659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4457298 - 4457386
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  4457298 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 4457386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4466923 - 4467011
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  4466923 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 4467011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5338035 - 5337947
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  5338035 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 5337947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5347931 - 5347843
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  5347931 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 5347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9503654 - 9503566
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  9503654 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 9503566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9515020 - 9514932
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  9515020 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 9514932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 12569975 - 12570059
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||    
T  12569975 gtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 12570059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16934947 - 16934859
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  16934947 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 16934859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17005607 - 17005519
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  17005607 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 17005519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32938069 - 32937981
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  32938069 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 32937981  T

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Target: chr2; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4456234 - 4456322
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  4456234 cttggtatttaacttgtgctcttgagtgttttcactaagataggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 4456322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18662499 - 18662587
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  18662499 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 18662587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 45190235 - 45190323
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||| ||||||    
T  45190235 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaagacatt 45190323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 22901491 - 22901576
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| || || ||||||||| ||||||  |||||||||||||    
T  22901491 ttggtatttaacttgtgctcttgagtggttaactaagacagaatcaagtttcaattcataccaagatacaaagaatcaaaggacat 22901576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 22909448 - 22909363
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||||| || || ||||||||| ||||||  |||||||||||||    
T  22909448 ttggtatttaacttgtgctcttgagtggttaactgagataggaacaagtttcaattcataccaagatacaaagaatcaaaggacat 22909363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 16135785 - 16135701
Alignment:
Q  3 tggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||| ||||| ||||||||||||||||||||||  || || |||||||||||||||| |||| |||||| |||||||||    
T  16135785 tggtatttaatttgtgttcttgagtgtttaactaagacaataaaaaagtttaaatcataccaagataccagaaattaaaggacat 16135701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18660758 - 18660846
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |||||||| | ||||||||||| || ||  |||||||||||||||    
T  18660758 cttggtatttaacttgtgctcttgagtgttttcactaagacagaaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 18660846  T

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Target: chr2; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 27160594 - 27160509
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || | ||||||| ||||||  ||||||| |||||    
T  27160594 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaatttataccaagatacaaagaatcaaaagacat 27160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 27170963 - 27170878
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || | ||||||| ||||||  ||||||| |||||    
T  27170963 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaatttataccaagatacaaagaatcaaaagacat 27170878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 573646 - 573732
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggaca 86  Q
    |||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||| ||| || ||  |||||||||||||    
T  573646 cttgatatttaacttgtgctcttgagtgttttcactaagacaagaacaaggtttgaatcatatcaagatgcataaaatcaaaggaca 573732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 23721347 - 23721432
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||| ||| |||||  ||||||||||||  || || ||||||||| ||||||  |||||||||||||    
T  23721347 ttggtatttaacttgtgctcttgggtggttaaccgagacaggaacaaatttcaattcataccaagatacaaagaatcaaaggacat 23721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 18650433 - 18650517
Alignment:
Q  5 gtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||| ||||| ||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  18650433 gtatttaatttgtgttcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 18650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 252 - 448
Target Start/End: Original strand, 23242476 - 23242672
Alignment:
Q  252 cggataaatacccaactattggggcgtatttgtgacggcgccacattcaaaaacttcagaacatccttctcaaacgtcgtaaaagggatcgtcaccccaa 351  Q
    |||||||||  |||||||||||||||||| ||||| ||||||| ||||| ||| || |||||   | | ||||||| |||||||||||| ||||| || |    
T  23242476 cggataaatgaccaactattggggcgtatatgtgatggcgccatattcataaattttagaacgcacatttcaaacgccgtaaaagggattgtcactccca 23242575  T
Q  352 actcctccaaaaccgccatatacattagaaatgactcgtccagggcgctcgccgattcctgatcgcatactcgttcatccacatcacaagatagcac 448  Q
    | || || || |||  ||||||||||| |||  |||||||  ||||   |||| |||  | ||| || ||||||||||||||| |||||| ||||||    
T  23242576 attcttctaacaccttcatatacattaaaaaaaactcgtcttgggctaccgccaattttttatcacaaactcgttcatccacaccacaaggtagcac 23242672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 19341707 - 19341785
Alignment:
Q  9 ttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||  | ||||| ||| ||||||  |||||||||||||    
T  19341707 ttaacttgtgctcttgagtggttaattaagacaggaataagtttcgattcatagcaagatacaaacaatcaaaggacat 19341785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40409692 - 40409606
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||| || || |||||||||||||||||||||| |||||| |  |||||||  |||| |  |||| ||||||||||||||    
T  40409692 cttggtatttaattt-tgttcttgagtgtttaactaagacaagaacaaagaataaatcaatccaagaagcaagcaatcaaaggacatt 40409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 45190174 - 45190204
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttt 31  Q
    |||||||||||||||||||||||||||||||    
T  45190174 cttggtatttaacttgtgctcttgagtgttt 45190204  T

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Target: scaffold0690 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4866 - 4770
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  4866 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaagtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 10704 - 10803
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaacta 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||    
T  10704 ggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcataccaagatacaagaaatcaaaggaca-atgaattcatgaacta 10802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 52378 - 52474
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  52378 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 52474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 93508 - 93412
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  93508 cttggtatttaacttgtgctcttgagtgttttactaaaacaggaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 93412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 791149 - 791245
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  791149 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttaaatcatactaagaatcaagaaatcaaaggacatttgaattcat 791245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7757176 - 7757272
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  7757176 cttggtatttaacttgtgctcttgagtgttttactaagacatgaacaaggtttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 7757272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21988666 - 21988570
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  21988666 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 21988570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21998184 - 21998088
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  21998184 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 21998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 20098234 - 20098330
Alignment:
Q  8 tttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||    
T  20098234 tttaacttgtgctcttgagtgtttaactaaaacaagaacaaggtttaaatcataccaagattcaagaaatcaatggacatttgaattcatgaactaa 20098330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25034709 - 25034805
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||||||||||    
T  25034709 cttggtatttaacttgtgctcttgagtgttttagtaagacaggaacaagttttaaatcataccaagaatcaagaaatcaaaggacatttgaattcat 25034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 17268255 - 17268350
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||    
T  17268255 ttggtatttaacttgttctcttgagtgttttactaagacaggaacaaggtttaaatcatactaagattcaagaaatcaaaggacattggaattcat 17268350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5868042 - 5867953
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttg 90  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  5868042 cttggtatttaacttgtgctcttaagtgtttaactaagaccggaacaaagtttaaatcataccaatttacaagaaatcaaaggacatttg 5867953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21446842 - 21446935
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaatt 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| |  |||||||||||||||||||||||||    
T  21446842 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaagtttagatcataccaagaatcaagaaatcaaaggacatttgaatt 21446935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 5758790 - 5758877
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5758790 ttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttaaatcataccaagatacatgaaatcaaaggacatt 5758877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2690943 - 2690839
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||| || || |    
T  2690943 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaagtttaaattataccaagattcaagaaatcaaaggacatttgattttatga 2690844  T
Q  100 actaa 104  Q
    |||||    
T  2690843 actaa 2690839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 12842158 - 12842073
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  12842158 ttggtatttaatttgtgctcttgagtatttaactaagacaggaacaaagtttaaatcataccaagatacaa-aaatcaaaggacatt 12842073  T

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Target: chr8; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20531992 - 20531904
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||    
T  20531992 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 20531904  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 26363003 - 26362918
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| ||||||  |||||||||||||    
T  26363003 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagttttaatttataccaagatacaaagaatcaaaggacat 26362918  T

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Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9325911 - 9325823
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  9325911 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 9325823  T

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Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14894782 - 14894694
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  14894782 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 14894694  T

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Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21203744 - 21203656
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21203744 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21203656  T

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Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21214160 - 21214072
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21214160 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21214072  T

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Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21333355 - 21333443
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21333355 cttggtatttaacttgtgctcttgagtgctttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21333443  T

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Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25506887 - 25506975
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  25506887 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32008469 - 32008381
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  32008469 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 32008381  T

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Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37295367 - 37295453
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||||  ||||||||||||||| |||||| |||||||| |||||    
T  37295367 cttggtatttaatttgtactcttgagtgtttaactaagacatgaacaaattttaaatcataccaagatacaaaaaatcaaatgacat 37295453  T

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Target: chr8; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13673568 - 13673656
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  13673568 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 13673656  T

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Target: chr8; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14882416 - 14882328
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||| || ||  |||||||||||||||    
T  14882416 cttggtatttaacttgtgctcttgagtgttttcactaagacagaaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 14882328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31992101 - 31992013
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||||||| || ||  |||||||||||||||    
T  31992101 cttggtatttaacttgtgctcttgagtgttttcactaagactggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 31992013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3967406 - 3967471
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaa 65  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  3967406 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaa 3967471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 14436780 - 14436865
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||  | |||||||||||| ||||||  |||||||| ||||    
T  14436780 ttggtatttaacttgtgctcttgagtgattaactaagacaagaacaagtgtaaaatcataccaagatacaaagaatcaaagaacat 14436865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33774792 - 33774704
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||| |||| ||||||||||| || ||  |||||||||||||||    
T  33774792 cttggtatttaacttgtgctcttgagtgttttcactaagacatgaacaaagtttgaatcataccaagatgcataaaatcaaaggacatt 33774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20707561 - 20707662
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    ||||||||||||||||  ||| |||||||||  |||||||||| ||||| |||||||||  ||||| |||||||||||||||||||| |||||||||| |    
T  20707561 cttggtatttaacttg--ctcatgagtgtttttactaagacagaaacaaagtttaaatcgcaccaagatacaagaaatcaaaggaca-ttgaattcatga 20707657  T
Q  100 actaa 104  Q
    |||||    
T  20707658 actaa 20707662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 11431281 - 11431243
Alignment:
Q  50 gtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  11431281 gtttaaataataccaagatacaagaaatcaaaggacatt 11431243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11411820 - 11411724
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  11411820 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacgaggtttgaatcataccaaaaatcaagaaatcaaaggacatttgaattcat 11411724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26192859 - 26192763
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  26192859 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 26192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26203419 - 26203323
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  26203419 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 26203323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 32069852 - 32069948
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  32069852 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 32069948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27411560 - 27411656
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||    
T  27411560 cttggtatttaacttgtgctattgagtgttttactaagacaggaacaaggtttagatcataccaagaatcaagaaatcaaaggacatttgaattcat 27411656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23379235 - 23379132
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  23379235 cttggtatttaacttgtgctcttgaatgttttactaagacatgaaaaatgtttaaatcattccaagatacaagaaatcaaaggacatttgaattcatgaa 23379136  T
Q  101 ctaa 104  Q
    ||||    
T  23379135 ctaa 23379132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20905403 - 20905301
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||| ||    
T  20905403 cttgatatttaacttgtgctcttgagtgttttactaagacgggaacaatgtttaaatcataccaagatacaagaaatcaaaggaca-atgaattcatgaa 20905305  T
Q  101 ctaa 104  Q
    ||||    
T  20905304 ctaa 20905301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 206348 - 206260
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  206348 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaataaggtttaaatcataccaagatacatgaaatcaaaggacatt 206260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33938486 - 33938573
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  33938486 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 33938573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33948886 - 33948973
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  33948886 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 33948973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22240424 - 22240518
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattc 95  Q
    |||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |   |||||||||||||||||||||||||    
T  22240424 cttgatatttaacttgtgctcttgagtgttttactaagataagaacaaggtttaaatcataccaagaattaagaaatcaaaggacatttgaattc 22240518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22174171 - 22174083
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||||  |||||||||||||||    
T  22174171 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatacataaaatcaaaggacatt 22174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8766366 - 8766278
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  8766366 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 8766278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13572581 - 13572493
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  13572581 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 13572493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18210744 - 18210656
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  18210744 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20763746 - 20763834
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||    
T  20763746 cttggtatttaacttgtgctcttgagtgtttttactaagacatgaacaaggtttgaatcataccaagatgcatgaaatcaaaggacatt 20763834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21680925 - 21681013
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21680925 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21681013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21752453 - 21752541
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21752453 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21752541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21761876 - 21761964
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  21761876 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 21761964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27275050 - 27274962
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  27275050 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 27274962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37816965 - 37817053
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  37816965 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 37817053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20896338 - 20896440
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||||||||||||||||| || || | | ||||||||||||| ||||||||| ||| |||||||||||||||  |||||||||| ||    
T  20896338 cttggtatttaacttgtgctcttgagtgttttacaaatataagaacaaggtttaagtcataccaagatagaagaaatcaaaggac-gttgaattcatgaa 20896436  T
Q  101 ctaa 104  Q
    ||||    
T  20896437 ctaa 20896440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 20947199 - 20947284
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  20947199 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 20947284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 20957588 - 20957673
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  20957588 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 20957673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 4038849 - 4038761
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || ||   ||||||||||||||    
T  4038849 cttggtatttaacttgtgctcttgagtgctttcactaagacaggaacaaggtttgaatcataccaagatgcatataatcaaaggacatt 4038761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18220094 - 18220006
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  18220094 cttggtatttaacttgtgctcttgagtgttttcactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 18220006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18360484 - 18360572
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  18360484 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 18360572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18389484 - 18389572
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  18389484 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 18389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19889211 - 19889123
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||| || ||  |||||||||||||||    
T  19889211 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaataaggtttgaatcataccaagatgcataaaatcaaaggacatt 19889123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30944715 - 30944627
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  30944715 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 30944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30954137 - 30954049
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| || ||  |||||||||||||||    
T  30954137 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaagatgcataaaatcaaaggacatt 30954049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31916198 - 31916286
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  31916198 cttggtatttaacttgtgttcttgagtgtttttactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 31916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37549490 - 37549402
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  37549490 cttggtatttaacttgtgctcttgagtgttttcactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 37549402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37652288 - 37652200
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  37652288 cttggtatttaacttgtgctcttgagtgttttcactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 37652200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37299700 - 37299612
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||||| |||| ||||||||||| || ||  |||||||||||||||    
T  37299700 cttggtatttaacatgtgctcttgagtgttttcactaagacaggaacaaagtttgaatcataccaagatgcataaaatcaaaggacatt 37299612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 42091391 - 42091301
Alignment:
Q  1 cttggtatttaacttgtgctcttga--gtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||| |  ||||||  |||||||||||||||| |||||||||||||||| || || ||||||||||||||||    
T  42091391 cttggtatttaacttgtgctctttatagtgtttttactaagacaggaacaatgtttaaatcataccaagatgcatgaaatcaaaggacatt 42091301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 31104835 - 31104924
Alignment:
Q  15 tgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaactaa 104  Q
    |||| ||||||||| ||||| ||||||  ||||| |||||||||||||||  ||||||||||||||| ||||||| ||||||| ||||||    
T  31104835 tgtgttcttgagtgattaaccaagacacaaacaaagtttaaatcataccatgatacaagaaatcaaatgacatttaaattcatgaactaa 31104924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 19549133 - 19549047
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaat-acaagaaatcaaaggacat 87  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||| || || ||||||||| || ||||  |||||||||||||    
T  19549133 ttggtatttaacctgtgctcttgagtggttaactaaaacaggaacaagtttcaattcataccaagataacaaagaatcaaaggacat 19549047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34131316 - 34131268
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaa 48  Q
    |||| ||||||||||||||||||||||| ||| ||||||||| ||||||    
T  34131316 cttgatatttaacttgtgctcttgagtgttttcactaagacatgaacaa 34131268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 199337 - 199233
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaa-atacaagaaatcaaaggacatttgaattcataa 99  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||| |||||| |    
T  199337 cttggtatttaacttgttctcttgagtgtttaactaagacaggaacaaggttaaaatattaccaaagatacaagaaatcaaaggacatttgcattcatga 199238  T
Q  100 actaa 104  Q
    |||||    
T  199237 actaa 199233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 7783 - 7878
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattca 96  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||| |  |||||||||||||||||||||||||||    
T  7783 cttggtatttaacttgtgctcttgagtgttttaataagacaggaacaaagtttaaatcataccaagaatcaagaaatcaaaggacatttgaattca 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 12788 - 12883
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  12788 ttggtatttaaattgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 12883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13230 - 13333
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| ||    
T  13230 cttggtatttaacttgtgctcttgaatgttttactaagacatgaaaaatgtttaaatcattccaagatacaagaaatcaaaggacatttgaattcatgaa 13329  T
Q  101 ctaa 104  Q
    ||||    
T  13330 ctaa 13333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 65101 - 65182
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaag 82  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  65101 cttgatatttaacttgtgctcttgagtgtttaactaagacaagaacaaggtttaaatcataccaagatacaagaaatcaaag 65182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15261 - 15357
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |  ||||||||||||||||| ||||||||||    
T  15261 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaatgtttaaatcatacgaagaatcaagaaatcaaaggacaattgaattcat 15357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 310674 - 310579
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||    
T  310674 cttggtatttaacttgtgctcttgagtgttttactaa-acaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggacatttgaattcat 310579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 216031 - 216073
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaac 46  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  216031 ggtatttaacttgtgctcttgagtattttactaagacatgaac 216073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29419 - 29316
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| || |||| ||||||||||||||||| || || ||    
T  29419 cttggtatttaacttgtgctcttgagtgttttactaagacatgaacaaggtttaaattataccaagattcaagtaatcaaaggacatttgattttatgaa 29320  T
Q  101 ctaa 104  Q
    ||||    
T  29319 ctaa 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 87377 - 87475
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaag--gacatttgaattcat 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |  |||||||||||||  |||||||||||||||    
T  87377 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggtttgaatcataccaagaatcaagaaatcaaaggagacatttgaattcat 87475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20031 - 19936
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||| ||||||| |  ||||||||||||||||||||||||||||    
T  20031 cttggtatttaacctgtgctcttgagtgatttactaagacaggaacaaggttt-aattataccaagaatcaagaaatcaaaggacatttgaattcat 19936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54033 - 54136
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||  ||||| |||||||||||||||||||| || |||||||||    
T  54033 cttggtatttaacttgtactattgagtgtttttactaagacaggaacaaggtttaaatctcaccaagatacaagaaatcaaaggaca-ttaaattcataa 54131  T
Q  100 actaa 104  Q
    |||||    
T  54132 actaa 54136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 57985 - 58088
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||  ||||| |||||||||||||||||||| || |||||||||    
T  57985 cttggtatttaacttgtactattgagtgtttttactaagacaggaacaaggtttaaatctcaccaagatacaagaaatcaaaggaca-ttaaattcataa 58083  T
Q  100 actaa 104  Q
    |||||    
T  58084 actaa 58088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 3e-25; HSPs: 5)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 167530 - 167633
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataaa 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||   |||||||||||  | |||||||||||||||||||||||| ||| || ||    
T  167530 cttggtatttaacttgtgctcttgtgtgtttatctaagacaggaacaaatgttaaatcatacatagatacaagaaatcaaaggacatttggatttatgaa 167629  T
Q  101 ctaa 104  Q
    ||||    
T  167630 ctaa 167633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 146114 - 146202
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||| || || ||||||||||||||||    
T  146114 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaacgtttgaatcataccaagatgcatgaaatcaaaggacatt 146202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 235066 - 234978
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  235066 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 234978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 115182 - 115079
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcataa 99  Q
    |||||||||||||| ||| ||||||||||||  ||||||||| |||||||| |||||||||||||| || || |||||||||||||| |||||||||| |    
T  115182 cttggtatttaactcgtgttcttgagtgtttttactaagacatgaacaaggattaaatcataccaagatgcatgaaatcaaaggaca-ttgaattcatga 115084  T
Q  100 actaa 104  Q
    |||||    
T  115083 actaa 115079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 154175 - 154087
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||| ||| | ||| |||||||  ||||||||||||||||||||||||||||||||| || || |||| |||||||||||    
T  154175 cttggtatttaacatgttcgctttagtgtttttactaagacaggaacaaggtttaaatcataccaagatgcatgaaaacaaaggacatt 154087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1705 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1705
Description:

Target: scaffold1705; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49 - 137
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  49 cttggtatttaacttgtgctcttgagtgctttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22773 - 22861
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||  ||| |||||||||||    
T  22773 cttggtatttaacttgtgctcttgagtgtttttactaagacaggaacaaggtttgaatcataccaaaatgcataaaaacaaaggacatt 22861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33526 - 33438
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  33526 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 33438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 112450 - 112362
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| || ||  |||||||||||||||    
T  112450 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 112362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 103194 - 103164
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttt 31  Q
    |||||||||||||||||||||||||||||||    
T  103194 cttggtatttaacttgtgctcttgagtgttt 103164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 1462 - 1377
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  1462 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1526 - 1437
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaataca-agaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| || || | |||||||||||||||    
T  1526 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaagatgcataaaaatcaaaggacatt 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 5147 - 5232
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  5147 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 5232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 19304 - 19389
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  | || ||||||||| ||||||  |||||||||||||    
T  19304 ttggtatttaacttgtgctcttgagtggttaactaagacaggaacaagtgtaaattcataccaagatacaaagaatcaaaggacat 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 267579 - 267494
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacat 87  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||| | ||| ||||||||| |||||    
T  267579 ttggtatttaacttgtcctcttgagtgtttaactaagacagaaacaaagtttaactcataccaagaaacaggaaatcaaaagacat 267494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12543 - 12455
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||  |  |||||||||||||||    
T  12543 cttggtatttaacttgtgctcttgagtgttttgactaagacaggaacaaggtttgaatcataccaagatggataaaatcaaaggacatt 12455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8734 - 8646
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| || ||  |||||||||||||||    
T  8734 cttggtatttaacttgtgctcttgagtgttttcactaagacaggatcaaggtttgaatcataccaagatgcataaaatcaaaggacatt 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 53; Significance: 5e-21; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 67194 - 67106
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  67194 cttggtatttaacttgtgctcttgagtgttttcactaagacatgaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 67106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 58950 - 58863
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||| || ||  |||||||||||||||    
T  58950 ttggtatttaacttgtgctcttgagtgtttttactaagacagaaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 58863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24460 - 24372
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||||||||| ||||||||||| || ||  ||| |||||||||||    
T  24460 cttggtatttaacttgtggtcttgagtgtttttactaagacaagaacaaggttttaatcataccaagatgcataaaagcaaaggacatt 24372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 57832 - 57745
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||| |||||||  ||||||| ||||||||||||| ||||||||||| || ||  ||| |||||||||||    
T  57832 ttggtatttaacttgtgctcttaagtgtttttactaagataggaacaaggtttgaatcataccaagatgcataaaagcaaaggacatt 57745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 9684 - 9771
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||| || ||  |||||||||||||||    
T  9684 ttggtatttaacttgtgctcttgagtgttttcactaagacagaaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 9771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22967 - 22915
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggttt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22967 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggttt 22915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 21673 - 21630
Alignment:
Q  54 aaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    |||||||||||| |  ||||||||||||||||||||||||||||    
T  21673 aaatcataccaagaatcaagaaatcaaaggacatttgaattcat 21630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 132405 - 132457
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggttt 53  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  132405 cttggtatttaacttgtgctcttgagtgttttactaagacaggaacaaggttt 132457  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 242333 - 242249
Alignment:
Q  4 ggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||||| ||||| ||||| ||||||||||||||||  |||||  | ||||||| || ||||  |||| |||||||| |||||    
T  242333 ggtatttaatttgtgttcttgggtgtttaactaagacaaaaacaaaatataaatcaaactaaaaagcaagcaatcaaagaacatt 242249  T

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Target: scaffold1411 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold1411
Description:

Target: scaffold1411; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 296 - 207
Alignment:
Q  1 cttggtatttaacttgtgctcttgag-tgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||| || ||  |||||||||||||||    
T  296 cttggtatttaacttgtgctcttgaggtgtttttactaagacaagaacaaggtttgaatcataccaagatgcataaaatcaaaggacatt 207  T

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Target: scaffold0809 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 340 - 275
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaa 65  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  340 cttggtatttaatttgtgctcttgagtgttttcactaagacaggaacaaggtttgaatcataccaa 275  T

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Target: scaffold0291 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22196 - 22261
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtg-tttaactaagacaggaacaaggtttaaatcataccaa 65  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||    
T  22196 cttggtatttaacttgtgctcttgagtgttttcactaagacaggaacaaggtctgaatcataccaa 22261  T

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Target: scaffold0434 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 13947 - 14027
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaag 82  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| || || | ||||||| ||||||  ||||||||    
T  13947 ttggtatttaacttgtgctcttgagtggtcaactaagacaggaacaagtttcaatttataccaagatacaaagaatcaaag 14027  T

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Target: scaffold0141 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 18148 - 18235
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttta-actaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    |||||||||||||||||||||| |||||||  |||||||||| ||||| |||| ||||||||||| || ||  |||||||||||||||    
T  18148 ttggtatttaacttgtgctctttagtgtttttactaagacagaaacaatgtttgaatcataccaagatgcataaaatcaaaggacatt 18235  T

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Target: scaffold0053 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 1445 - 1378
Alignment:
Q  30 ttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatttgaattcat 97  Q
    ||||| ||||||  ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  1445 ttaaccaagacaaaaacaaagtttaaatcataccaagatacaagaaatcaatggacatttgaattcat 1378  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 41255 - 41171
Alignment:
Q  2 ttggtatttaacttgtgctcttgagtgttt-aactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggac 85  Q
    ||||||||||||||||||| |||||||||| || ||||| | |||||| |||||| ||||||  | || ||||||||||||||||    
T  41255 ttggtatttaacttgtgcttttgagtgtttaaattaagatatgaacaaagtttaattcatacgtagatgcaagaaatcaaaggac 41171  T

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Target: scaffold1468 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1468
Description:

Target: scaffold1468; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 745 - 811
Alignment:
Q  22 ttgagtgtttaactaagacaggaacaaggtttaaatcataccaaaatacaagaaatcaaaggacatt 88  Q
    ||||||| ||||| ||||||  ||||| |||||||| ||||||| || |||||||||||||||||||    
T  745 ttgagtgattaaccaagacacaaacaaagtttaaataataccaagatgcaagaaatcaaaggacatt 811  T

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Target: scaffold0713 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5651 - 5587
Alignment:
Q  1 cttggtatttaacttgtgctcttgagtgtttaactaagacaggaacaaggtttaaatcataccaa 65  Q
    ||||||||||||| | || |||| |||| ||||||||||||||||||| || ||||||| |||||    
T  5651 cttggtatttaacatatgttcttaagtgattaactaagacaggaacaaagtataaatcaaaccaa 5587  T

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